Pregenerated sensors for TAF1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031939Ensembl transcript IDs: ENSMUST00000034415.6, ENSMUST00000164079.9, ENSMUST00000213763.2, ENSMUST00000214054.2, ENSMUST00000214316.2, ENSMUST00000215124.2, ENSMUST00000215749.2, ENSMUST00000216109.2, ENSMUST00000216825.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGAGGTGGTGAACCTCCAGATACTCTAACTCTCCTTTCTTCATaGCCTTGCTCTGCAGATGAGCAAAAGGGCGAGGCTGGGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: HRGGEPPDTLTLLSS*PCSADEQKGEAGVL Trigger: CAAGACCCCAGCCTCGCCCTTTTGCTCATCTGCAGAGCAAGGTCATGAAGAAAGGAGAGTTAGAGTATCTGGAGGTTCACCACCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214316.2 |
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| 3UTR TCA 90 bp | GAGCTTCCAGATTTAGCCATCATACGTGCCTGGCTGCTAGGGTTTTaGACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTTGATC | + |
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Preference number: 1 (lower is better) Translates to: ELPDLAIIRAWLLGF*TYIYCASYPAKNLI Trigger: GATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATGGCTAAATCTGGAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR GCA 90 bp | CATCATACGTGCCTGGCTGCTAGGGTTTTGAACTTATATTTACTGTaGCAGCTACCCAGCCAAGAATTTGATCTTGAGACAAAGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: HHTCLAARVLNLYLL*QLPSQEFDLETKFP Trigger: TGGAAACTTTGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR GCA 90 bp | AGGCTTCTCACTAAAATCAGAGCTTCCAGATTTAGCCATCATACGTaGCTGGCTGCTAGGGTTTTGAACTTATATTTACTGTGCCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: RLLTKIRASRFSHHT*LAARVLNLYLLCQL Trigger: TAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATGGCTAAATCTGGAAGCTCTGATTTTAGTGAGAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR TCA 90 bp | CATCTCTTTAGGGTCTTCTCATATCCATTCCTAGAGAACAACACATaGCTCACACTCACAACTCTAATCTTTATGAAGGAAGTGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: HLFRVFSYPFLENNT*LTLTTLIFMKEVPV Trigger: CACTGGCACTTCCTTCATAAAGATTAGAGTTGTGAGTGTGAGTCATGTGTTGTTCTCTAGGAATGGATATGAGAAGACCCTAAAGAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215749.2 |
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| 3UTR TCA 90 bp | ACTGATAATAGATTACCTTCCCTGAGCACTCCAAATACTATTCACTaGAGGCTTCTCACTAAAATCAGAGCTTCCAGATTTAGCCATCAT | + |
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Preference number: 1 (lower is better) Translates to: TDNRLPSLSTPNTIH*RLLTKIRASRFSHH Trigger: ATGATGGCTAAATCTGGAAGCTCTGATTTTAGTGAGAAGCCTTCAGTGAATAGTATTTGGAGTGCTCAGGGAAGGTAATCTATTATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR TCA 90 bp | GAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCAGAAGATTTaGGGATTTCTTCAATTTATTTTAAGGACCCTTCATGTTATCTTT | + |
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Preference number: 1 (lower is better) Translates to: EGFDSFAVHPGHQKI*GFLQFILRTLHVIF Trigger: AAAGATAACATGAAGGGTCCTTAAAATAAATTGAAGAAATCCTCAAATCTTCTGGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 |
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| 3UTR CAA 90 bp | AGAGCTTCCAGATTTAGCCATCATACGTGCCTGGCTGCTAGGGTTTaGAACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: RASRFSHHTCLAARV*NLYLLCQLPSQEFD Trigger: ATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATGGCTAAATCTGGAAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCACTATGATTACCAGCTaGAGCCAGTTCTGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SQINYLRDLIPLLSIQVTTMITS*SQFCQS Trigger: ACTCTGACAGAACTGGCTGCAGCTGGTAATCATAGT...GGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCAAAATCCTAAGCCCTTTACTGGGTAGACTTTCAGCTATTGAGTTTATGCTAGAGAACAACACATaGCTTTTAAAAAGGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QCKILSPLLGRLSAIEFMLENNT*LLKRLS Trigger: TGACAGCCTTTTTAAAAGTCATGTGTTGTTCTCTAG...CATAAACTCAATAGCTGAAAGTCTACCCAGTAAAGGGCTTAGGATTTTGCACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATATCCATTCCTCACACTCACAACTCTAATCTTTATGAAGGAAGTGCCAGTACAAACATCCATTCATaGGTATCTTCCAATTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LISIPHTHNSNLYEGSASTNIHS*VSSNSD Trigger: GTCAGAATTGGAAGATACCCATGAATGGATGTTTGT...ACTGGCACTTCCTTCATAAAGATTAGAGTTGTGAGTGTGAGGAATGGATATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTTGTACACATAGCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGAACAAACATCCATTCATaGGTATCTTCCAATTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LGCTHSKCFSENLHATWRTNIHS*VSSNSD Trigger: GTCAGAATTGGAAGATACCCATGAATGGATGTTTGT...TCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGCTATGTGTACAACCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214054.2 ENSMUST00000215749.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGATCTACAATTCTTTATACTAGAGAACAACACATaGCTCACACTCACAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: ANVFLRTYMRPGDLQFFILENNT*LTLTTL Trigger: TAGAGTTGTGAGTGTGAGTCATGTGTTGTTCTCTAG...TATAAAGAATTGTAGATCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215749.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCAGAGTTGAATTCATCATCTaGACTGGAACTATCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QINYLRDLIPLLSIQVTRVEFII*TGTIFS Trigger: GGAAAAGATAGTTCCAGTTCAGATGATGAATTCAAC...TCTGGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTTGATCTTGAGACAAAGTACAAACATCCATTCATaGGTATCTTCCAATTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TYIYCASYPAKNLILRQSTNIHS*VSSNSD Trigger: GTCAGAATTGGAAGATACCCATGAATGGATGTTTGT...ACTTTGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTTGATCTTGAGACAAAGTATGTTAGTTCATGTTTaGCTCATTCAGCAGTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: TYIYCASYPAKNLILRQSMLVHV*LIQQLN Trigger: GTTCAACTGCTGAATGAGCCAAACATGAACTAACAT...ACTTTGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACACAAACATCCATTCATaGGTATCTTCCAATTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: KSNKLFEGFDSFAVHPGHTNIHS*VSSNSD Trigger: GTCAGAATTGGAAGATACCCATGAATGGATGTTTGT...GTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| 3UTR TCA 72 bp | GGTGAACCTCCAGATACTCTAACTCTCCTTTCTTCATaGCCTTGCTCTGCAGATGAGCAAAAGGGCGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GEPPDTLTLLSS*PCSADEQKGEA Trigger: AGCCTCGCCCTTTTGCTCATCTGCAGAGCAAGGTCATGAAGAAAGGAGAGTTAGAGTATCTGGAGGTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214316.2 |
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| 3UTR TCA 72 bp | GATTTAGCCATCATACGTGCCTGGCTGCTAGGGTTTTaGACTTATATTTACTGTGCCAGCTACCCAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: DLAIIRAWLLGF*TYIYCASYPAK Trigger: CTTGGCTGGGTAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATGGCTAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR TCA 72 bp | AAAGCTTTAAGACCAGGTAGTTTAAGACCCCCACATTaGGATCAAACTTGCAAGTTGTTCTGCCCTCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KALRPGSLRPPH*DQTCKLFCPPR Trigger: TCGGGGAGGGCAGAACAACTTGCAAGTTTGATCTCAATGTGGGGGTCTTAAACTACCTGGTCTTAAAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR GCA 72 bp | TGCCTGGCTGCTAGGGTTTTGAACTTATATTTACTGTaGCAGCTACCCAGCCAAGAATTTGATCTTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: CLAARVLNLYLL*QLPSQEFDLET Trigger: TGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR GCA 72 bp | GCCCTTTACTGGGTAGACTTTCAGCTATTGAGTTTATaGATGAGAGTTCCATCTCAGCTAAAATTCCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: ALYWVDFQLLSL*MRVPSQLKFPQ Trigger: TTGGGGGAATTTTAGCTGAGATGGAACTCTCATGCATAAACTCAATAGCTGAAAGTCTACCCAGTAAAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR TCA 72 bp | AGATTACCTTCCCTGAGCACTCCAAATACTATTCACTaGAGGCTTCTCACTAAAATCAGAGCTTCCAGATTT | + |
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Preference number: 3 (lower is better) Translates to: RLPSLSTPNTIH*RLLTKIRASRF Trigger: AAATCTGGAAGCTCTGATTTTAGTGAGAAGCCTTCAGTGAATAGTATTTGGAGTGCTCAGGGAAGGTAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR TCA 72 bp | GTACATACACACACACTGATAATAGATTACCTTCCCTaGGCACTCCAAATACTATTCACTGAAGGCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VHTHTLIIDYLP*ALQILFTEGFS Trigger: TGAGAAGCCTTCAGTGAATAGTATTTGGAGTGCTCAGGGAAGGTAATCTATTATCAGTGTGTGTGTATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR GCA 72 bp | ACTAAAATCAGAGCTTCCAGATTTAGCCATCATACGTaGCTGGCTGCTAGGGTTTTGAACTTATATTTACTG | + |
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Preference number: 3 (lower is better) Translates to: TKIRASRFSHHT*LAARVLNLYLL Trigger: CAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATGGCTAAATCTGGAAGCTCTGATTTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCAGAATGTTAGTTCATGTTaGGCTCATTCAGCAGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: SNKLFEGFDSFAVHPGHQNVSSC*AHSAVE Trigger: TTCAACTGCTGAATGAGCCAAACATGAACTAACATT...CTGGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| 3UTR TCA 72 bp | GTGGGACTAGTACATGGTGTATCTTTTTATCCCTACTaGATGAACATTTCTAGTTATTCTGATTTGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: VGLVHGVSFYPY*MNISSYSDLAF Trigger: AAATGCCAAATCAGAATAACTAGAAATGTTCATTCAGTAGGGATAAAAAGATACACCATGTACTAGTCCCAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCCATCCAGGTCACCTCATCTCACATGTGGTTTCAGAGTTAACATCTTACTTCAAGGTTCTTCTGTaGCCTTTCTCTCTGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AVHPGHLISHVVSELTSYFKVLL*PFSLCV Trigger: CACACACAGAGAGAAAGGGCACAGAAGAACCTTGAA...GTAAGATGTTAACTCTGAAACCACATGTGAGATGAGGTGACCTGGATGGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216825.2 |
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| 3UTR CAA 72 bp | AGATTTAGCCATCATACGTGCCTGGCTGCTAGGGTTTaGAACTTATATTTACTGTGCCAGCTACCCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RFSHHTCLAARV*NLYLLCQLPSQ Trigger: TTGGCTGGGTAGCTGGCACAGTAAATATAAGTTCAAAACCCTAGCAGCCAGGCACGTATGATGGCTAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| CDS-3UTR TCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTACCTTGCTCTGCAGATaGGCAAAAGGGCGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPTLLCR*AKGRGW Trigger: CCAGCCTCGCCCTTTTGCTCATCTGCAGAGCAAGGT...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
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| CDS-3UTR GCA 90 bp | AGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATCTTCCAATTCCAGCTCTATCCGATaGCACACAGACAGAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: RKCQCNTETNIHSWVSSNSSSIR*HTDRIH Trigger: GTGAATTCTGTCTGTGTGGCATCGGATAGAGCTGGA...ATTGGAAGATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR GCA 90 bp | TATCCATTCCTCACACTCACAACTCTAATCTTTATGAAGGAAGTGCCAGTGCAATCCAGCTCTATCCGATaGCACACAGACAGAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: YPFLTLTTLIFMKEVPVQSSSIR*HTDRIH Trigger: GTGAATTCTGTCTGTGTGGCATCGGATAGAGCTGGA...TTGCACTGGCACTTCCTTCATAAAGATTAGAGTTGTGAGTGTGAGGAATGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATCTTCCAATTCCCCAGCATGCATTTaGTTCAAGCATTCCTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: RKCQCNTETNIHSWVSSNSPACI*FKHSLR Trigger: CCTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGA...ATTGGAAGATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGGGTCTTGAATCTAGACATGTATAGGATTGTTAGCATTTTCCTTCCATTCAAGGTTCTTCTGTaGCCTTTCTCTCTGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EAGVLNLDMYRIVSIFLPFKVLL*PFSLCV Trigger: CACACACAGAGAGAAAGGGCACAGAAGAACCTTGAA...TGGAAGGAAAATGCTAACAATCCTATACATGTCTAGATTCAAGACCCCAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214316.2 |
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| CDS-3UTR CCA 90 bp | CTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATGAGGAGTCATCACTTTaGTCTCCAGTATCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LYEGSASATLKQTSIHGYEESSL*SPVSPA Trigger: AGCTGGAGATACTGGAGACCAAAGTGATGACTCCTC...ATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR TCA 90 bp | CTCATATCCATTCCTCACACTCACAACTCTAATCTTTATGAAGGAAGTGCCAGTGGTGAAGGAGCACACTaGGTTTTAAATAAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LISIPHTHNSNLYEGSASGEGAH*VLNKLP Trigger: TGGCAGCTTATTTAAAACTCAGTGTGCTCCTTCACC...ACTGGCACTTCCTTCATAAAGATTAGAGTTGTGAGTGTGAGGAATGGATATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
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| CDS-3UTR TCA 90 bp | GTTCACTCGTGTCACCCAAACATCTCTTTAGGGTCTTCTCATATCCATTCCTCAGGTGGTGTTCATACTTaGGTTTTTCAATGTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: VHSCHPNISLGSSHIHSSGGVHT*VFQCGE Trigger: TTCACCACATTGAAAAACTCAAGTATGAACACCACC...TGAGGAATGGATATGAGAAGACCCTAAAGAGATGTTTGGGTGACACGAGTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
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| CDS-3UTR GCA 90 bp | ACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTTGATCTTGAGACAAAGTTCCAGCTCTATCCGATaGCACACAGACAGAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: TYIYCASYPAKNLILRQSSSSIR*HTDRIH Trigger: GTGAATTCTGTCTGTGTGGCATCGGATAGAGCTGGA...ACTTTGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| CDS-3UTR GCA 90 bp | CTAGGTTGTACACATAGCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGATCCCCAGCATGCATTTaGTTCAAGCATTCCTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: LGCTHSKCFSENLHATWRSPACI*FKHSLR Trigger: CCTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGA...TCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGCTATGTGTACAACCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214054.2 ENSMUST00000215749.2 |
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| CDS-3UTR GCA 90 bp | CAGTGCAAAATCCTAAGCCCTTTACTGGGTAGACTTTCAGCTATTGAGTTTATGTTCAAGGTTCTTCTGTaGCCTTTCTCTCTGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: QCKILSPLLGRLSAIEFMFKVLL*PFSLCV Trigger: CACACACAGAGAGAAAGGGCACAGAAGAACCTTGAA...CATAAACTCAATAGCTGAAAGTCTACCCAGTAAAGGGCTTAGGATTTTGCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
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| CDS-3UTR GCA 90 bp | CTAGGTTGTACACATAGCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGATTCAAGGTTCTTCTGTaGCCTTTCTCTCTGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LGCTHSKCFSENLHATWRFKVLL*PFSLCV Trigger: CACACACAGAGAGAAAGGGCACAGAAGAACCTTGAA...TCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGCTATGTGTACAACCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214054.2 ENSMUST00000215749.2 |
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| CDS-3UTR GCA 90 bp | AGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCTCCCCAGCATGCATTTaGTTCAAGCATTCCTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SQINYLRDLIPLLSIQVTSPACI*FKHSLR Trigger: CCTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGA...GGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTTGCTGTCCATCCAGGTCACCAGAAGATTTGAGGATTTCTTCAATTTATTCCCCAGCATGCATTTaGTTCAAGCATTCCTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: FLCCPSRSPEDLRISSIYSPACI*FKHSLR Trigger: CCTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGA...ATAAATTGAAGAAATCCTCAAATCTTCTGGTGACCTGGATGGACAGCAAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 |
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| CDS-3UTR CCA 90 bp | TCTAATCTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGAGGAGTCATCACTTTaGTCTCCAGTATCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SNLYEGSASATLKQTSIHEESSL*SPVSPA Trigger: AGCTGGAGATACTGGAGACCAAAGTGATGACTCCTC...ATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAGATTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR TCA 90 bp | TCTAATCTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGTGAAGGAGCACACTaGGTTTTAAATAAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SNLYEGSASATLKQTSIHGEGAH*VLNKLP Trigger: TGGCAGCTTATTTAAAACTCAGTGTGCTCCTTCACC...ATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAGATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR TCA 90 bp | AAGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACGGTGAAGGAGCACACTaGGTTTTAAATAAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSNKLFEGFDSFAVHPGHGEGAH*VLNKLP Trigger: TGGCAGCTTATTTAAAACTCAGTGTGCTCCTTCACC...GTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR TCA 90 bp | CTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATGGTGGTGTTCATACTTaGGTTTTTCAATGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYEGSASATLKQTSIHGYGGVHT*VFQCGE Trigger: TTCACCACATTGAAAAACTCAAGTATGAACACCACC...ATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTACTCTCCTTTCTTCATaGCCTTGCTCTGCAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPTLLSS*PCSADE Trigger: CTCATCTGCAGAGCAAGGTCATGAAGAAAGGAGAGT...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTTCCAGCTCTATCCGATaGCACACAGACAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPSSSIR*HTDRIH Trigger: GTGAATTCTGTCTGTGTGGCATCGGATAGAGCTGGA...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR GCA 90 bp | CCATCCAGGTCACCTCATCTCACATGTGGTTTCAGAGTTAACATCTTACCAGAACCTCTTGCAACAGCTTaGTCATATGTTAAAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSPHLTCGFRVNILPEPLATA*SYVKIF Trigger: GAAAATTTTAACATATGAGCAAGCTGTTGCAAGAGG...TTCTGGTAAGATGTTAACTCTGAAACCACATGTGAGATGAGGTGACCTGGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216825.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTGCTGTCCATCCAGGTCACCAGAAGATTTGAGGATTTCTTCAATTTATAAATCTTCCCCAGCATaGATTTGCTTCAAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLCCPSRSPEDLRISSIYKSSPA*ICFKHS Trigger: GGAATGCTTGAAGCAAATGCATGCTGGGGAAGATTT...ATAAATTGAAGAAATCCTCAAATCTTCTGGTGACCTGGATGGACAGCAAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCAAATCTTCCCCAGCATaGATTTGCTTCAAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQINYLRDLIPLLSIQVTKSSPA*ICFKHS Trigger: GGAATGCTTGAAGCAAATGCATGCTGGGGAAGATTT...GGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACTTCAAGGTTCTTCTGTaGCCTTTCTCTCTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSNKLFEGFDSFAVHPGHFKVLL*PFSLCV Trigger: CACACACAGAGAGAAAGGGCACAGAAGAACCTTGAA...GTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CCA 90 bp | AGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTCATGAGGAGTCATCACTTTaGTCTCCAGTATCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIRVQEFNPIFKSSLPPHEESSL*SPVSPA Trigger: AGCTGGAGATACTGGAGACCAAAGTGATGACTCCTC...ATGAGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR TCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTGGTGAAGGAGCACACTaGGTTTTAAATAAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPGEGAH*VLNKLP Trigger: TGGCAGCTTATTTAAAACTCAGTGTGCTCCTTCACC...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR TCA 90 bp | AGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCGGTGGTGTTCATACTTaGGTTTTTCAATGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQINYLRDLIPLLSIQVTGGVHT*VFQCGE Trigger: TTCACCACATTGAAAAACTCAAGTATGAACACCACC...GGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR GCA 90 bp | AGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTCATTCCCCAGCATGCATTTaGTTCAAGCATTCCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVQEFNPIFKSSLPPHSPACI*FKHSLR Trigger: CCTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGA...ATGAGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR GCA 90 bp | TGCAACACTGAAACAAACATCCATTCATGGGTATCTTCCAATTCTGACTTCATAAAATCTTCCCCAGCATaGATTTGCTTCAAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CNTETNIHSWVSSNSDFIKSSPA*ICFKHS Trigger: GGAATGCTTGAAGCAAATGCATGCTGGGGAAGATTT...TATGAAGTCAGAATTGGAAGATACCCATGAATGGATGTTTGTTTCAGTGTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTTTCAAGGTTCTTCTGTaGCCTTTCTCTCTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPFKVLL*PFSLCV Trigger: CACACACAGAGAGAAAGGGCACAGAAGAACCTTGAA...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034415.6 ENSMUST00000214316.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGTTGTACACATAGCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGACCTCTTGCAACAGCTTaGTCATATGTTAAAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGCTHSKCFSENLHATWRPLATA*SYVKIF Trigger: GAAAATTTTAACATATGAGCAAGCTGTTGCAAGAGG...TCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGCTATGTGTACAACCTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTAAATCTTCCCCAGCATaGATTTGCTTCAAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPKSSPA*ICFKHS Trigger: GGAATGCTTGAAGCAAATGCATGCTGGGGAAGATTT...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR GCA 90 bp | GCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGATCTACAATTCTTTATAAAATCTTCCCCAGCATaGATTTGCTTCAAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANVFLRTYMRPGDLQFFIKSSPA*ICFKHS Trigger: GGAATGCTTGAAGCAAATGCATGCTGGGGAAGATTT...TATAAAGAATTGTAGATCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214054.2 ENSMUST00000215749.2 |
||
| 3UTR CAA 72 bp | GATCTTGAGACAAAGTTTCCATTTCTCAGATTGTACTaGAAACTTCTCACCTCAGACTCTCAACTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLETKFPFLRLY*KLLTSDSQLIE Trigger: TTCTATGAGTTGAGAGTCTGAGGTGAGAAGTTTCAAGTACAATCTGAGAAATGGAAACTTTGTCTCAAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
||
| 3UTR CAA 72 bp | GAATTTGATCTTGAGACAAAGTTTCCATTTCTCAGATaGTACTTGAAACTTCTCACCTCAGACTCTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: EFDLETKFPFLR*YLKLLTSDSQL Trigger: GAGTTGAGAGTCTGAGGTGAGAAGTTTCAAGTACAATCTGAGAAATGGAAACTTTGTCTCAAGATCAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
||
| 3UTR CAA 72 bp | ACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTaGATCTTGAGACAAAGTTTCCATTTCTCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYIYCASYPAKN*ILRQSFHFSDC Trigger: ACAATCTGAGAAATGGAAACTTTGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTTTGCTTTTGTATAGGTaGAGGAGCACACTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPLLLYR*RSTLSF Trigger: AAAACTCAGTGTGCTCCTTCACCTATACAAAAGCAA...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR TCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTGGTGGTGTTCATACTTaGGTTTTTCAATGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPGGVHT*VFQCGE Trigger: TTCACCACATTGAAAAACTCAAGTATGAACACCACC...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR GCA 90 bp | AGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTCATTGTTTTGCATCTATTTaGGACCTTCTAGTGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIRVQEFNPIFKSSLPPHCFASI*DLLVIL Trigger: GAGGATCACTAGAAGGTCGCAAATAGATGCAAAACA...ATGAGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTGCTGTCCATCCAGGTCACCAGAAGATTTGAGGATTTCTTCAATTTATCCTCTTGCAACAGCTTaGTCATATGTTAAAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCCPSRSPEDLRISSIYPLATA*SYVKIF Trigger: GAAAATTTTAACATATGAGCAAGCTGTTGCAAGAGG...ATAAATTGAAGAAATCCTCAAATCTTCTGGTGACCTGGATGGACAGCAAAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTCCTCTTGCAACAGCTTaGTCATATGTTAAAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPPLATA*SYVKIF Trigger: GAAAATTTTAACATATGAGCAAGCTGTTGCAAGAGG...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS TCA 90 bp | TCCAGATACTCTAACTCTCCTTTCTTCATGACCTTGCTCTGCAGATaGGCAAAAGGGCGAGGCTGGGGTCTTGAATCTTCTTCAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRYSNSPFFMTLLCR*AKGRGWGLESSSIV Trigger: GACTATTGAAGAAGATTCAAGACCCCAGCCTCGCCCTTTTGCTCATCTGCAGAGCAAGGTCATGAAGAAAGGAGAGTTAGAGTATCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCGTGTCACCCAAACATCTCTTTAGGGTCTTCTCATATCCATTCCTCAAGAGGAGTCATCACTTaGGTCTCCAGTATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHSCHPNISLGSSHIHSSRGVIT*VSSISS Trigger: GCTGGAGATACTGGAGACCAAAGTGATGACTCCTCT...TGAGGAATGGATATGAGAAGACCCTAAAGAGATGTTTGGGTGACACGAGTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATAGAGGAGTCATCACTTaGGTCTCCAGTATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYEGSASATLKQTSIHGYRGVIT*VSSISS Trigger: GCTGGAGATACTGGAGACCAAAGTGATGACTCCTCT...ATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | CTCATATCCATTCCTCACACTCACAACTCTAATCTTTATGAAGGAAGTGCCAGTAGAGGAGTCATCACTTaGGTCTCCAGTATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LISIPHTHNSNLYEGSASRGVIT*VSSISS Trigger: GCTGGAGATACTGGAGACCAAAGTGATGACTCCTCT...ACTGGCACTTCCTTCATAAAGATTAGAGTTGTGAGTGTGAGGAATGGATATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATCTTCCAATTTCCCCAGCATGCATTaGCTTCAAGCATTCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKCQCNTETNIHSWVSSNFPSMH*LQAFLK Trigger: CTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGAA...ATTGGAAGATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCGTGTCACCCAAACATCTCTTTAGGGTCTTCTCATATCCATTCCTCACAGCCTGAGGATTTGTaGCTTCATCTTCAGTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VHSCHPNISLGSSHIHSSQPEDL*LHLQLM Trigger: CATTAACTGAAGATGAAGCAACAAATCCTCAGGCTG...TGAGGAATGGATATGAGAAGACCCTAAAGAGATGTTTGGGTGACACGAGTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATTTCCCCAGCATGCATTaGCTTCAAGCATTCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYEGSASATLKQTSIHGYFPSMH*LQAFLK Trigger: CTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGAA...ATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | TCACCCAAACATCTCTTTAGGGTCTTCTCATATCCATTCCTCACACTCACAACTCAGCCTGAGGATTTGTaGCTTCATCTTCAGTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SPKHLFRVFSYPFLTLTTQPEDL*LHLQLM Trigger: CATTAACTGAAGATGAAGCAACAAATCCTCAGGCTG...AGTTGTGAGTGTGAGGAATGGATATGAGAAGACCCTAAAGAGATGTTTGGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | GTTCACTCGTGTCACCCAAACATCTCTTTAGGGTCTTCTCATATCCATTCCTCAATTCAGCCTGAGGATTaGTTGCTTCATCTTCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VHSCHPNISLGSSHIHSSIQPED*LLHLQL Trigger: TAACTGAAGATGAAGCAACAAATCCTCAGGCTGAAT...TGAGGAATGGATATGAGAAGACCCTAAAGAGATGTTTGGGTGACACGAGTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTAGAGGAGTCATCACTTaGGTCTCCAGTATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPRGVIT*VSSISS Trigger: GCTGGAGATACTGGAGACCAAAGTGATGACTCCTCT...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR CAA 90 bp | AGTCAAATAAATTATTTGAGGGATTTGATTCCTTTGCTGTCCATCCAGGTCACCTTCCCCAGCATGCATTaGCTTCAAGCATTCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQINYLRDLIPLLSIQVTFPSMH*LQAFLK Trigger: CTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGAA...GGTGACCTGGATGGACAGCAAAGGAATCAAATCCCTCAAATAATTTATTTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGTTGTACACATAGCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGACAGCCTGAGGATTTGTaGCTTCATCTTCAGTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LGCTHSKCFSENLHATWRQPEDL*LHLQLM Trigger: CATTAACTGAAGATGAAGCAACAAATCCTCAGGCTG...TCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGCTATGTGTACAACCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214054.2 ENSMUST00000215749.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGGTATCTTCCAATATTCAGCCTGAGGATTaGTTGCTTCATCTTCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RKCQCNTETNIHSWVSSNIQPED*LLHLQL Trigger: TAACTGAAGATGAAGCAACAAATCCTCAGGCTGAAT...ATTGGAAGATACCCATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | AGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTCATCCGATGGTTTTCCTCTaGGTCTTCCTCTTGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SIRVQEFNPIFKSSLPPHPMVFL*VFLLVL Trigger: TAAGACCAAGAGGAAGACCAAGAGGAAAACCATCGG...ATGAGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR CAA 90 bp | TCTAATCTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATTTCCCCAGCATGCATTaGCTTCAAGCATTCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLYEGSASATLKQTSIHFPSMH*LQAFLK Trigger: CTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGAA...ATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAGATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTTTCCCCAGCATGCATTaGCTTCAAGCATTCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPFPSMH*LQAFLK Trigger: CTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGAA...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
||
| CDS-3UTR CAA 90 bp | ATTCCTTTGCTGTCCATCCAGGTCACCAGAAGATTTGAGGATTTCTTCAATTTAATTCAGCCTGAGGATTaGTTGCTTCATCTTCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IPLLSIQVTRRFEDFFNLIQPED*LLHLQL Trigger: TAACTGAAGATGAAGCAACAAATCCTCAGGCTGAAT...TAAATTGAAGAAATCCTCAAATCTTCTGGTGACCTGGATGGACAGCAAAGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 |
||
| CDS-3UTR CAA 90 bp | ACTTATATTTACTGTGCCAGCTACCCAGCCAAGAATTTGATCTTGAGACAAAGTGGAAACACAGCTCCTTaGTCTTTAATTTGTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TYIYCASYPAKNLILRQSGNTAP*SLICFA Trigger: TGCAAAACAAATTAAAGACAAAGGAGCTGTGTTTCC...ACTTTGTCTCAAGATCAAATTCTTGGCTGGGTAGCTGGCACAGTAAATATAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214054.2 |
||
| CDS-3UTR CAA 90 bp | AGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTCATCAGCCTGAGGATTTGTaGCTTCATCTTCAGTTAATG | + |
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Preference number: 5 (lower is better) Translates to: SIRVQEFNPIFKSSLPPHQPEDL*LHLQLM Trigger: CATTAACTGAAGATGAAGCAACAAATCCTCAGGCTG...ATGAGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
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| CDS-3UTR CAA 90 bp | GCAAATGTTTTTCTGAGAACTTACATGCGACCTGGAGATCTACAATTCTTTATACAGCCTGAGGATTTGTaGCTTCATCTTCAGTTAATG | + |
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Preference number: 5 (lower is better) Translates to: ANVFLRTYMRPGDLQFFIQPEDL*LHLQLM Trigger: CATTAACTGAAGATGAAGCAACAAATCCTCAGGCTG...TATAAAGAATTGTAGATCTCCAGGTCGCATGTAAGTTCTCAGAAAAACATTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214054.2 ENSMUST00000215749.2 |
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| CDS-3UTR CAA 90 bp | TCTAATCTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATATTCAGCCTGAGGATTaGTTGCTTCATCTTCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: SNLYEGSASATLKQTSIHIQPED*LLHLQL Trigger: TAACTGAAGATGAAGCAACAAATCCTCAGGCTGAAT...ATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAGATTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
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| CDS-3UTR CAA 90 bp | TGCAACACTGAAACAAACATCCATTCATGGGTATCTTCCAATTCTGACTTCATAGGAAACACAGCTCCTTaGTCTTTAATTTGTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: CNTETNIHSWVSSNSDFIGNTAP*SLICFA Trigger: TGCAAAACAAATTAAAGACAAAGGAGCTGTGTTTCC...TATGAAGTCAGAATTGGAAGATACCCATGAATGGATGTTTGTTTCAGTGTTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR CAA 90 bp | TCTAATCTTTATGAAGGAAGTGCCAGTGCAACACTGAAACAAACATCCATTCATGGAAACACAGCTCCTTaGTCTTTAATTTGTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: SNLYEGSASATLKQTSIHGNTAP*SLICFA Trigger: TGCAAAACAAATTAAAGACAAAGGAGCTGTGTTTCC...ATGAATGGATGTTTGTTTCAGTGTTGCACTGGCACTTCCTTCATAAAGATTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000216825.2 |
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| CDS-3UTR CAA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTATTCAGCCTGAGGATTaGTTGCTTCATCTTCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPIQPED*LLHLQL Trigger: TAACTGAAGATGAAGCAACAAATCCTCAGGCTGAAT...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
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| CDS-3UTR CAA 90 bp | TCTAGTATAAGAGTCCAGGAGTTTAATCCAATTTTCAAATCATCTCTTCCTCCTGGAAACACAGCTCCTTaGTCTTTAATTTGTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: SSIRVQEFNPIFKSSLPPGNTAP*SLICFA Trigger: TGCAAAACAAATTAAAGACAAAGGAGCTGTGTTTCC...AGGAGGAAGAGATGATTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
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| CDS TCA 72 bp | GCTCTGCAGATGAGCAAAAGGGCGAGGCTGGGGTCTTaGATCTTCTTCAATAGTCACATGTTCATTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALQMSKRARLGS*IFFNSHMFISF Trigger: AAAGGAAATGAACATGTGACTATTGAAGAAGATTCAAGACCCCAGCCTCGCCCTTTTGCTCATCTGCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034415.6 |
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| CDS CCA 72 bp | GTTTTAAATAAGCTGCCATCAGAGGAGTCATCACTTTaGTCTCCAGTATCTCCAGCTCTATCCGATGCCACA | + |
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Preference number: 6 (lower is better) Translates to: VLNKLPSEESSL*SPVSPALSDAT Trigger: TGTGGCATCGGATAGAGCTGGAGATACTGGAGACCAAAGTGATGACTCCTCTGATGGCAGCTTATTTAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034415.6 ENSMUST00000164079.9 ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215124.2 ENSMUST00000216109.2 ENSMUST00000216825.2 |
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| CDS CAA 90 bp | GAATGGAAACACAGCTCCTTTGTCTTTAATTTGTTTTGCATCTATTaGCGACCTTCTAGTGATCCTCGTTCCCGATGGTTTTCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: EWKHSSFVFNLFCIY*RPSSDPRSRWFSSW Trigger: CCAAGAGGAAAACCATCGGGAACGAGGATCACTAGAAGGTCGCAAATAGATGCAAAACAAATTAAAGACAAAGGAGCTGTGTTTCCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000034415.6 ENSMUST00000164079.9 ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215124.2 ENSMUST00000216825.2 |
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| CDS TCA 72 bp | CAACTGTCTTCAACCAACTTGATATCACATTCAGCCTaGGGATTTGTTGCTTCATCTTCAGTTAATGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QLSSTNLISHSA*GFVASSSVNGS Trigger: AGAGCCATTAACTGAAGATGAAGCAACAAATCCTCAGGCTGAATGTGATATCAAGTTGGTTGAAGACAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034415.6 ENSMUST00000164079.9 ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
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| CDS CAA 72 bp | TCAATAGGAGAAAGTGAACCATCATCATCCATGTATTaGTGCCTCCGACTGTCAAGGTCTTCCTTTTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: SIGESEPSSSMY*CLRLSRSSFSK Trigger: TTTAGAAAAGGAAGACCTTGACAGTCGGAGGCACAAATACATGGATGATGATGGTTCACTTTCTCCTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000034415.6 ENSMUST00000164079.9 ENSMUST00000213763.2 ENSMUST00000214054.2 ENSMUST00000215749.2 ENSMUST00000216825.2 |
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