Pregenerated sensors for TAF1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031832Ensembl transcript IDs: ENSMUST00000093099.13, ENSMUST00000147964.8
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCCCGCGCTGTCCTTCCGGGCAGCCAGGCCAACGCGCCCCCGGTaGAGGCCTCATCCATCAGCAGCTGCTCCCAGCGCATGGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: RPALSFRAARPTRPR*RPHPSAAAPSAWPA Trigger: AGCTGGCCATGCGCTGGGAGCAGCTGCTGATGGATGAGGCCTTCACCGGGGGCGCGTTGGCCTGGCTGCCCGGAAGGACAGCGCGGGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR TCA 90 bp | TCACACCCGTGCGGTCCCCCACAGTCAGCACCCGGGGGTGGGCAGTaGAGTCTGCCCAGCGCCAGGGAGACGGATCACGGAAGGCAAGCG | + |
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Preference number: 1 (lower is better) Translates to: SHPCGPPQSAPGGGQ*SLPSARETDHGRQA Trigger: CGCTTGCCTTCCGTGATCCGTCTCCCTGGCGCTGGGCAGACTTCACTGCCCACCCCCGGGTGCTGACTGTGGGGGACCGCACGGGTGTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | CGTGCGGTCCCCCACAGTCAGCACCCGGGGGTGGGCAGTGAAGTCTaGCCAGCGCCAGGGAGACGGATCACGGAAGGCAAGCGTCTCGGT | + |
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Preference number: 1 (lower is better) Translates to: RAVPHSQHPGVGSEV*PAPGRRITEGKRLG Trigger: ACCGAGACGCTTGCCTTCCGTGATCCGTCTCCCTGGCGCTGGGCAGACTTCACTGCCCACCCCCGGGTGCTGACTGTGGGGGACCGCACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GCTCATCCTGTTGGCTGCACTGAGGTGCAGGGGGTGGCTCTGCCCTaGGGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCTGGCCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: AHPVGCTEVQGVALP*GVYSGPQAAGAGPW Trigger: CCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACTCCCCAGGGCAGAGCCACCCCCTGCACCTCAGTGCAGCCAACAGGATGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | CGGACGGCCAGAAGCGTTTCTCCCTGGACGGTGCTGGTCACCACCTaGCGTACAGGTCCCCGCAGCTGGACGTGCCCAGGGTTCTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: RTARSVSPWTVLVTT*RTGPRSWTCPGFSR Trigger: CCTTGAGAACCCTGGGCACGTCCAGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAACGCTTCTGGCCGTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | CCCTGGACGGTGCTGGTCACCACCTGCCGTACAGGTCCCCGCAGCTaGACGTGCCCAGGGTTCTCAAGGATCCGGGGGTTGCCACCTGAA | + |
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Preference number: 1 (lower is better) Translates to: PWTVLVTTCRTGPRS*TCPGFSRIRGLPPE Trigger: TTCAGGTGGCAACCCCCGGATCCTTGAGAACCCTGGGCACGTCCAGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCACCGTCCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | CCTGGCTGCCCTAGGTACTGGGCAAGCAGCACCCGCTCTCCTTTCTaGCAGGCAGCCTCTGCTCCAGCGCGGAACAGCAGCAGCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: PGCPRYWASSTRSPF*QAASAPARNSSSPQ Trigger: CTGTGGGCTGCTGCTGTTCCGCGCTGGAGCAGAGGCTGCCTGCCAGAAAGGAGAGCGGGTGCTGCTTGCCCAGTACCTAGGGCAGCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GATAGTCAGAGCGGACGGCCAGAAGCGTTTCTCCCTGGACGGTGCTaGTCACCACCTGCCGTACAGGTCCCCGCAGCTGGACGTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: DSQSGRPEAFLPGRC*SPPAVQVPAAGRAQ Trigger: CTGGGCACGTCCAGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAACGCTTCTGGCCGTCCGCTCTGACTATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCTGGCCCTTGGCCATaGCTGCTCGGAGCTTCTGTGGCATGGTCTCTTGGCTCTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GVYSGPQAAGAGPWP*LLGASVAWSLGSSA Trigger: GGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR TCA 90 bp | ACCAGGCAGTCACCCGGCCTTCCCAGGCTTCTGTCAAGCGCTCAGTaGGCTCATCCTGTTGGCTGCACTGAGGTGCAGGGGGTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TRQSPGLPRLLSSAQ*AHPVGCTEVQGVAL Trigger: CAGAGCCACCCCCTGCACCTCAGTGCAGCCAACAGGATGAGCTCACTGAGCGCTTGACAGAAGCCTGGGAAGGCCGGGTGACTGCCTGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | GGCTTCTTCTGGGGAGGCTGGGAGCCAGAGTGGACAGGCGTCTGCTaGCTGAAAGACATGGTCTGGAGGCTAGAGGCCTGGGAGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GFFWGGWEPEWTGVC*LKDMVWRLEAWEGG Trigger: ACCACCCTCCCAGGCCTCTAGCCTCCAGACCATGTCTTTCAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCCTCCCCAGAAGAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | CGTGGCTTCTTCTGGGGAGGCTGGGAGCCAGAGTGGACAGGCGTCTaGTGCCTGAAAGACATGGTCTGGAGGCTAGAGGCCTGGGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RGFFWGGWEPEWTGV*CLKDMVWRLEAWEG Trigger: ACCCTCCCAGGCCTCTAGCCTCCAGACCATGTCTTTCAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCCTCCCCAGAAGAAGCCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GCAGGAGCTGGCCCTTGGCCATGGCTGCTCGGAGCTTCTGTGGCATaGTCTCTTGGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACGGC | + |
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Preference number: 1 (lower is better) Translates to: AGAGPWPWLLGASVA*SLGSSAAPCGPENG Trigger: GCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | CGGGGCAGAGGCACAGAGGGGGACAGCAGCCAGACCTATGACTGGTaGCTCCAGACGTTCCTGCAGCAGCTGCTGCTTCTTAGGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RGRGTEGDSSQTYDW*LQTFLQQLLLLRFQ Trigger: CTGGAACCTAAGAAGCAGCAGCTGCTGCAGGAACGTCTGGAGGCACCAGTCATAGGTCTGGCTGCTGTCCCCCTCTGTGCCTCTGCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | GCCATGGCTGCTCGGAGCTTCTGTGGCATGGTCTCTTGGCTCTTCTaGCGCTCCATGTGGCCCAGAAAACGGCGATGGGAGAAGGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: AMAARSFCGMVSWLF*RSMWPRKRRWEKVG Trigger: CCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | TGGCCCTTGGCCATGGCTGCTCGGAGCTTCTGTGGCATGGTCTCTTaGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACGGCGATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: WPLAMAARSFCGMVS*LFCRSMWPRKRRWE Trigger: CTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR TCA 90 bp | AGCAGGGGAAAGGCAGAGAGGGATTCGGTGATGGAGGGCAGAGACTaGGGAGGCCCCGCCAGCTGTGGCATGGAAGTTCCCTCTCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: SRGKAERDSVMEGRD*GGPASCGMEVPSPV Trigger: AACAGGAGAGGGAACTTCCATGCCACAGCTGGCGGGGCCTCCTCAGTCTCTGCCCTCCATCACCGAATCCCTCTCTGCCTTTCCCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | CGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTaGTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTTTCTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: RSQIPKLQELALGRG*SELLWHGLLALSAA Trigger: AGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | TGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTaGCTCTTTCTGCAGCTCCATGTGGCCCAGAGAATGGCAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: WPLVVAARSFCGMVS*LFLQLHVAQRMAVG Trigger: TCCCACTGCCATTCTCTGGGCCACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GGCAAGCGTCTCGGTGTCCTTGTAGATCGTCTGCAGCCCAGCTTGTaGGGTCCACAGACAAACAGCTCCGGAACGGCTGCAGATGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: GKRLGVLVDRLQPSL*GPQTNSSGTAADGQ Trigger: CTGGCCATCTGCAGCCGTTCCGGAGCTGTTTGTCTGTGGACCCCACAAGCTGGGCTGCAGACGATCTACAAGGACACCGAGACGCTTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | CGGAGCTTCTGTGGCATGGTCTCTTGGCTCTTCTGCCGCTCCATGTaGCCCAGAAAACGGCGATGGGAGAAGGTCGGGGCGACCCACAAT | + |
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Preference number: 1 (lower is better) Translates to: RSFCGMVSWLFCRSM*PRKRRWEKVGATHN Trigger: ATTGTGGGTCGCCCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | AGGGGGACAGCAGCCAGACCTATGACTGGTGCCTCCAGACGTTCCTaGAGCAGCTGCTGCTTCTTAGGTTCCAGCAGGGGAAAGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RGTAARPMTGASRRS*SSCCFLGSSRGKAE Trigger: CTCTGCCTTTCCCCTGCTGGAACCTAAGAAGCAGCAGCTGCTGCAGGAACGTCTGGAGGCACCAGTCATAGGTCTGGCTGCTGTCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | CAGAAGCCCATTCGTGGCTTCTTCTGGGGAGGCTGGGAGCCAGAGTaGACAGGCGTCTGCTGCCTGAAAGACATGGTCTGGAGGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: QKPIRGFFWGGWEPE*TGVCCLKDMVWRLE Trigger: CTCTAGCCTCCAGACCATGTCTTTCAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCCTCCCCAGAAGAAGCCACGAATGGGCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR TCA 90 bp | ACGAGGGGCACTGCTGGCATCTGGGGAGTCCAGGTAGCTTGTGAATaGGGAGAAGGTGCTAGACAACTGAGTCCGCCGCTTAGGCCGCTT | + |
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Preference number: 1 (lower is better) Translates to: TRGTAGIWGVQVACE*GEGARQLSPPLRPL Trigger: AAGCGGCCTAAGCGGCGGACTCAGTTGTCTAGCACCTTCTCCTCATTCACAAGCTACCTGGACTCCCCAGATGCCAGCAGTGCCCCTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | GGGCTGAGGCTAATACCAGTGGCCCCTTTCTCCACCTGCATCACCTaGAGGAGTGCTGGTGGCCCCTGCTTATCAATCTTCCACGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: GLRLIPVAPFSTCIT*RSAGGPCLSIFHVA Trigger: TGCCACGTGGAAGATTGATAAGCAGGGGCCACCAGCACTCCTGCAGGTGATGCAGGTGGAGAAAGGGGCCACTGGTATTAGCCTCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | GCCAGACCTATGACTGGTGCCTCCAGACGTTCCTGCAGCAGCTGCTaGTTCTTAGGTTCCAGCAGGGGAAAGGCAGAGAGGGATTCGGTG | + |
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Preference number: 1 (lower is better) Translates to: ARPMTGASRRSCSSC*FLGSSRGKAERDSV Trigger: CACCGAATCCCTCTCTGCCTTTCCCCTGCTGGAACCTAAGAAGCAGCAGCTGCTGCAGGAACGTCTGGAGGCACCAGTCATAGGTCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | GCAGCCAGACCTATGACTGGTGCCTCCAGACGTTCCTGCAGCAGCTaGTGCTTCTTAGGTTCCAGCAGGGGAAAGGCAGAGAGGGATTCG | + |
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Preference number: 1 (lower is better) Translates to: AARPMTGASRRSCSS*CFLGSSRGKAERDS Trigger: CGAATCCCTCTCTGCCTTTCCCCTGCTGGAACCTAAGAAGCAGCAGCTGCTGCAGGAACGTCTGGAGGCACCAGTCATAGGTCTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | AGCTCCATGTGGCCCAGAGAATGGCAGTGGGAGAAGGCAGGAGACTaGGGGGACTTGGGACTGCAGGGACTCAGCATTAGCCATCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: SSMWPREWQWEKAGD*GDLGLQGLSISHPD Trigger: ATCAGGATGGCTAATGCTGAGTCCCTGCAGTCCCAAGTCCCCCCAGTCTCCTGCCTTCTCCCACTGCCATTCTCTGGGCCACATGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GGATTCGGTGATGGAGGGCAGAGACTGAGGAGGCCCCGCCAGCTGTaGCATGGAAGTTCCCTCTCCTGTTATATGAAGCAGCTGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: GFGDGGQRLRRPRQL*HGSSLSCYMKQLQL Trigger: CAGCTGCAGCTGCTTCATATAACAGGAGAGGGAACTTCCATGCCACAGCTGGCGGGGCCTCCTCAGTCTCTGCCCTCCATCACCGAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | CTGCTGCCTGAAAGACATGGTCTGGAGGCTAGAGGCCTGGGAGGGTaGTGTAGCCACAGGTCCTGGAGTGTCCCTCTTAAGTGGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LLPERHGLEARGLGG*CSHRSWSVPLKWQL Trigger: AAGCTGCCACTTAAGAGGGACACTCCAGGACCTGTGGCTACACCACCCTCCCAGGCCTCTAGCCTCCAGACCATGTCTTTCAGGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | GGTTCCCCATTGCTTCAGCCTAGTTCTACACTGCTCACGTTTCCATaGGCACACTGCTCTCTGCATGGCAGAGGCAGAGGAGGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GSPLLQPSSTLLTFP*AHCSLHGRGRGGSA Trigger: GGCAGAGCCTCCTCTGCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | TCACCTGCAGGAGTGCTGGTGGCCCCTGCTTATCAATCTTCCACGTaGCACAGTGATAGTCAGAGCGGACGGCCAGAAGCGTTTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SPAGVLVAPAYQSST*HSDSQSGRPEAFLP Trigger: AGGGAGAAACGCTTCTGGCCGTCCGCTCTGACTATCACTGTGCCACGTGGAAGATTGATAAGCAGGGGCCACCAGCACTCCTGCAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | AATACCAGTGGCCCCTTTCTCCACCTGCATCACCTGCAGGAGTGCTaGTGGCCCCTGCTTATCAATCTTCCACGTGGCACAGTGATAGTC | + |
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Preference number: 1 (lower is better) Translates to: NTSGPFLHLHHLQEC*WPLLINLPRGTVIV Trigger: GACTATCACTGTGCCACGTGGAAGATTGATAAGCAGGGGCCACCAGCACTCCTGCAGGTGATGCAGGTGGAGAAAGGGGCCACTGGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR GCA 90 bp | ACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTaGTCACGTTTCCATGGGCACACTGCTCTCTGCATGGCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: TRSGLVPHCFSLVLH*SRFHGHTALCMAEA Trigger: TGCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR CCA 90 bp | TCTGCAGCCAGCTCTCGGGAATATCCTACCATCAAATACACGAAGTaGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTGCTCACG | + |
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Preference number: 1 (lower is better) Translates to: SAASSREYPTIKYTK*TGSPLLQPSSTLLT Trigger: CGTGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATTTGATGGTAGGATATTCCCGAGAGCTGGCTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTCTGGGTCTCGGAGGTCTCACCTCGATGTCTCCTCCACCAGGCAGTCACCCCGGGGGTGGGCAGTaGAGTCTGCCCAGCGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGLGLGGLTSMSPPPGSHPGGGQ*SLPSAR Trigger: CCTGGCGCTGGGCAGACTTCACTGCCCACCCCCGGG...GTGACTGCCTGGTGGAGGAGACATCGAGGTGAGACCTCCGAGACCCAGACCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCCAACGGGCACTGGCCTaGGGGGTCCAAGAGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: GAGPWSWLLGASVAWSPGQRALA*GVQEGV Trigger: CACGCCCTCTTGGACCCCTCAGGCCAGTGCCCGTTG...GCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTGGGGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCTGGCCCTTGGCCATTTCTCCCTGGACGGTaGTGGTCACCACCTGCCGTA | + |
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Preference number: 2 (lower is better) Translates to: LPWGVYSGPQAAGAGPWPFLPGR*WSPPAV Trigger: TACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAA...TGGCCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACTCCCCAGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGCCAGATCCAGGCAGAGGAGGCTCTaGCCTGGAGTGGCTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PAALRCRGWLYPGDVARSRQRRL*PGVAEL Trigger: GAGCTCAGCCACTCCAGGGCAGAGCCTCCTCTGCCT...GGATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTGGCTCTGCCCTGGAGTaGCTGAGCTCAGTGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ELALGRGCSELLWHGLLAGSALE*LSSVQH Trigger: GTGCTGCACTGAGCTCAGCCACTCCAGGGCAGAGCC...AGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCTGGCCCTTGGCCATGGCATGTGGCCCAGAGAATaGCAGTGGGAGAAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PGECTQVPRPQELALGHGMWPRE*QWEKAG Trigger: TCCTGCCTTCTCCCACTGCCATTCTCTGGGCCACAT...GCCATGGCCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACTCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGCCAGATCACAGGAGCTGGCCCTTaGTCGTGGCTGCTCGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PCCTEVQGVALPWRRSQITGAGP*SWLLGA Trigger: AGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGT...GATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTACAGGTCCCCGCAGCTaGACGTGCCCAGGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: ELALGRGCSELLWHGLLATGPRS*TCPGFS Trigger: TGAGAACCCTGGGCACGTCCAGCTGCGGGGACCTGT...AGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCGCTCCATGTGGCCCAGAAAACGGCGATGGGAGAAGGTCGGGGCGACCGGCTGCCCTAGGTACTaGGCAAGCAGCACCCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FCRSMWPRKRRWEKVGATGCPRY*ASSTRS Trigger: AGAGCGGGTGCTGCTTGCCCAGTACCTAGGGCAGCC...GGTCGCCCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCGGCGTTCACGCTTCACACCTTGGCCCCACACCTCCTGTGTCAACTCCTGGCTGCCCTGGAGTGGCTaGGCTCAGTGCAGCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: CRRSRFTPWPHTSCVNSWLPWSG*AQCSTP Trigger: TGGAGTGCTGCACTGAGCTCAGCCACTCCAGGGCAG...CCAGGAGTTGACACAGGAGGTGTGGGGCCAAGGTGTGAAGCGTGAACGCCGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCGGGCACACTGCTCTCTaGATGGCAGAGGCAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GWLYPGDVARSPSYRSWPGHTAL*MAEAEE Trigger: CTCCTCTGCCTCTGCCATGCAGAGAGCAGTGTGCCC...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCGCTCCATGTGGCCCAGAAAACGGCGATGGGAGAAGGTCGGGGCGACCGCCCTTGGTCGTGGCTaGTCGGAGCTTCTGTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: FCRSMWPRKRRWEKVGATALGRG*SELLWH Trigger: ATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGC...GGTCGCCCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCACACCTTGGCCCCACACCTCCTGTGTCAACTCCTGGGAGGGTGGAACCCCAGCTCCGGAACGGCTaGAGATGGCCAGCTCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASHLGPTPPVSTPGRVEPQLRNG*RWPALL Trigger: CAGGAGAGCTGGCCATCTGCAGCCGTTCCGGAGCTG...GGGTTCCACCCTCCCAGGAGTTGACACAGGAGGTGTGGGGCCAAGGTGTGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATGTGGCCCAGAAAACGGCGATGGGAGAAGGTCGGGGCGACCCACAATGGACAGGAGCTGGCCCTTaGTCGTGGCTGCTCGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LHVAQKTAMGEGRGDPQWTGAGP*SWLLGA Trigger: AGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGT...CCATTGTGGGTCGCCCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CAA 90 bp | CTGGCCCTTGGCCATGGCTGCTCGGAGCTTCTGTGGCATGGTCTCTaGGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACGGCGATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LALGHGCSELLWHGL*ALLPLHVAQKTAMG Trigger: TCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCGAGCTGGGGCATCTTTaGGGACAGGAGGCTAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GWLYPGDVARSPSYRSWPELGHL*GQEAKA Trigger: AGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTC...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCATGGTCTCTTGGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACGGCGATGATGGAGGGCAGAGACTaGGGAGGCCCCGCCAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: WHGLLALLPLHVAQKTAMMEGRD*GGPASC Trigger: ACAGCTGGCGGGGCCTCCTCAGTCTCTGCCCTCCAT...CATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | AGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTAGGCAGAGGAGGCTCTaGCCTGGAGTGGCTGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RSPSYRSWPLVVAARSFCRQRRL*PGVAEL Trigger: GAGCTCAGCCACTCCAGGGCAGAGCCTCCTCTGCCT...ACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGACTGGGTCTGGGTCTCGGAGGTCTCACCTCGATGTCTCCTCCACCAGGCATTGGCTGCACTGAGGTaGAGGGGGTGGCTCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LDWVWVSEVSPRCLLHQALAALR*RGWLCP Trigger: AGGGCAGAGCCACCCCCTGCACCTCAGTGCAGCCAA...TGCCTGGTGGAGGAGACATCGAGGTGAGACCTCCGAGACCCAGACCCAGTCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGGCTCTGCCCTGGAGTaGCTGAGCTCAGTGCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SSNPAALRCRGWLYPGDVGSALE*LSSVQH Trigger: GTGCTGCACTGAGCTCAGCCACTCCAGGGCAGAGCC...TACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGACACTGCTCTCTGCATaGCAGAGGCAGAGGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RSWPLVVAARSFCGMVSWTLLSA*QRQRRL Trigger: GAGCCTCCTCTGCCTCTGCCATGCAGAGAGCAGTGT...CCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCGCGGAACAGCAGCAGCCCACAGCCCGGTGGGCCCTGAATGTCAACCATACACTGCTCTCTGCATaGCAGAGGCAGAGGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SSAEQQQPTARWALNVNHTLLSA*QRQRRL Trigger: GAGCCTCCTCTGCCTCTGCCATGCAGAGAGCAGTGT...ATGGTTGACATTCAGGGCCCACCGGGCTGTGGGCTGCTGCTGTTCCGCGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTGCTCGGAGCTTCTGTaGCATGGTCTCCTGGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GAGPWSWLLGASVAWSPGCSELL*HGLLAL Trigger: AAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCA...GCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCTCACCTCGATGTCTCCTCCACCAGGCAGTCACCCGGCCTTCCCAGGCTTCCAAGCTACAGGAGCTaGCCCTTGGTCGTGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RSHLDVSSTRQSPGLPRLPSYRS*PLVVAA Trigger: AGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGG...AAGCCTGGGAAGGCCGGGTGACTGCCTGGTGGAGGAGACATCGAGGTGAGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCTCACCTCGATGTCTCCTCCACCAGGCAGTCACCCGGCCTTCCCAGGCTTCTGAGGTGCAGGGGGTaGCTCTACCCTGGAGACGTA | + |
|
Preference number: 2 (lower is better) Translates to: RSHLDVSSTRQSPGLPRLLRCRG*LYPGDV Trigger: TACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAG...AAGCCTGGGAAGGCCGGGTGACTGCCTGGTGGAGGAGACATCGAGGTGAGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGCATGGTCTCTTGGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACGGCGCTCCCTGGACGGTGCTaGTCACCACCTGCCGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: LWHGLLALLPLHVAQKTALPGRC*SPPAVQ Trigger: CTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAG...CGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCATTCGTGGCTTCTTCTaGGGAGGCTGGGAGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GWLYPGDVARSPSYRSWPIRGFF*GGWEPE Trigger: CTCTGGCTCCCAGCCTCCCCAGAAGAAGCCACGAAT...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCCTGCTCACGTTTCCATaGGCACACTGCTCTCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GAGPWSWLLGASVAWSPGLLTFP*AHCSLH Trigger: ATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAG...GCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGCCAGATCCTTCTGCAGCTCCATGTaGCCCAGAGAATGGCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PAALRCRGWLYPGDVARSFCSSM*PREWQW Trigger: CCACTGCCATTCTCTGGGCCACATGGAGCTGCAGAA...GGATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTACCAAGCTACAGGAGCTaGCCCTTGGTCGTGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSNPAALRCRGWLYPGDVPSYRS*PLVVAA Trigger: AGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGG...TACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CAA 90 bp | GAAGGCAAGCGTCTCGGTGTCCTTGTAGATCGTCTGCAGCCCAGCTaGTGGGGTCCACAGACAAACAGCTCCGGAACGGCTGCAGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: EGKRLGVLVDRLQPS*WGPQTNSSGTAADG Trigger: GCCATCTGCAGCCGTTCCGGAGCTGTTTGTCTGTGGACCCCACAAGCTGGGCTGCAGACGATCTACAAGGACACCGAGACGCTTGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTTTCTGCAGCTCCATGTGGGCACACTGCTCTCTaGATGGCAGAGGCAGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GCSELLWHGLLALSAAPCGHTAL*MAEAEE Trigger: CTCCTCTGCCTCTGCCATGCAGAGAGCAGTGTGCCC...ACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTTCTCCTGGCTCTTTCTaGAGCTCCATGTGGCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PDPQATGAGPWSWLLGASSPGSF*SSMWPR Trigger: TCTGGGCCACATGGAGCTGCAGAAAGAGCCAGGAGA...AGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCACATGAGCTGGGGCATCTTTGAGGACAGGAGGCTAAGGCTACTTTCTAGCCCAACGCGCCCCCGGTaGAGGCCTCATCCATCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EHMSWGIFEDRRLRLLSSPTRPR*RPHPSA Trigger: TGCTGATGGATGAGGCCTTCACCGGGGGCGCGTTGG...GCTAGAAAGTAGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTCATGTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTCATCACCTGCAGGAGTaGTGGTGGCCCCTGCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: RLLSSNPAALRCRGWLYPHHLQE*WWPLLI Trigger: GATAAGCAGGGGCCACCAGCACTCCTGCAGGTGATG...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGCCAGATCCATACACGAAGTGGACTaGTTCCCCATTGCTTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PAALRCRGWLYPGDVARSIHEVD*FPIASA Trigger: GGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTAT...GGATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGGCGTTCACGCTTCACACCTTGGCCCCACACCTCCTGTGTCAACTCCTGGTGTGGCATGGTCTCCTaGCTCTTTCTGCAGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: CRRSRFTPWPHTSCVNSWCGMVS*LFLQLH Trigger: ATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACA...CCAGGAGTTGACACAGGAGGTGTGGGGCCAAGGTGTGAAGCGTGAACGCCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCACATGAGCTGGGGCATCTTTGAGGACAGGAGGCTAAGGCTACTTTCTAGCCTGCCCTGGAGTGGCTaGGCTCAGTGCAGCACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: EHMSWGIFEDRRLRLLSSLPWSG*AQCSTP Trigger: TGGAGTGCTGCACTGAGCTCAGCCACTCCAGGGCAG...GCTAGAAAGTAGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTCATGTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGGAGGCCCCGCCAGCTGTGGCATGGAAGTTCCCTCTCCTGTTATATGAAACCTCGGGGAGCACATaGGCTGGGGCATCTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TEEAPPAVAWKFPLLLYETSGST*AGASLR Trigger: CCTCAAAGATGCCCCAGCTCATGTGCTCCCCGAGGT...TTCATATAACAGGAGAGGGAACTTCCATGCCACAGCTGGCGGGGCCTCCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGCACAATCAACCTCCAACAGCTGACCCACACTGGGCTACCTCGGGGAGCATTTCCATGGGCACACTaGTCTCTGCATGGCAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: CGTINLQQLTHTGLPRGAFPWAH*SLHGRG Trigger: GCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAA...TGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTATGTGGCCCAGAGAATaGCAGTGGGAGAAGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RLLSSNPAALRCRGWLYPMWPRE*QWEKAG Trigger: TCCTGCCTTCTCCCACTGCCATTCTCTGGGCCACAT...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGCTGACCCACACTGGGCTACCTCGGGGAGCACATGAGCTGGGGCATCTTTGTGGCATGGTCTCCTaGCTCTTTCTGCAGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QQLTHTGLPRGAHELGHLCGMVS*LFLQLH Trigger: ATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACA...AAGATGCCCCAGCTCATGTGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGCTTCTGTGGCATaGTCTCCTGGCTCTTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RLLSSNPAALRCRGWLYPGASVA*SPGSFC Trigger: GCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCC...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTTCAGAAGCCCATTCGTaGCTTCTTCTGGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RLLSSNPAALRCRGWLYPSEAHS*LLLGRL Trigger: CAGCCTCCCCAGAAGAAGCCACGAATGGGCTTCTGA...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGACTGGGTCTGGGTCTCGGAGGTCTCACCTCGATGTCTCCTCCACCAGGCATGCTGTTGCTTGCTCTaGCACCTTTCTAGGACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LDWVWVSEVSPRCLLHQACCCLL*HLSRTG Trigger: TCCAGTCCTAGAAAGGTGCCAGAGCAAGCAACAGCA...TGCCTGGTGGAGGAGACATCGAGGTGAGACCTCCGAGACCCAGACCCAGTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCTAGGTTCTCAGATATGGCTTTCCCCACTCAGAAGCCCATTCGTGGCTTCAAGGTGCTAGACAACTaGGTCCGCCGCTTAGGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: KARFSDMAFPTQKPIRGFKVLDN*VRRLGR Trigger: GCGGCCTAAGCGGCGGACTCAGTTGTCTAGCACCTT...GAAGCCACGAATGGGCTTCTGAGTGGGGAAAGCCATATCTGAGAACCTAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCACATGAGCTGGGGCATCTTTGAGGACAGGAGGCTAAGGCTACTTTCTAGCTGCTCGGAGCTTCTGTaGCATGGTCTCCTGGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: EHMSWGIFEDRRLRLLSSCSELL*HGLLAL Trigger: AAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCA...GCTAGAAAGTAGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTCATGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCTAGGTTCTCAGATATGGCTTTCCCCACTCAGAAGCCCATTCGTGGCTTCTGCAGCACTCCAGGATaGAGGCTAGGTTCTCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KARFSDMAFPTQKPIRGFCSTPG*RLGSQI Trigger: TATCTGAGAACCTAGCCTTCATCCTGGAGTGCTGCA...GAAGCCACGAATGGGCTTCTGAGTGGGGAAAGCCATATCTGAGAACCTAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCATCAAATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACATGCAGCACTCCAGGATaGAGGCTAGGTTCTCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: TIKYTKWTGSPLLQPSSTCSTPG*RLGSQI Trigger: TATCTGAGAACCTAGCCTTCATCCTGGAGTGCTGCA...TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATTTGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | ACACCCGTGCGGTCCCCCACAGTCAGCACCCGGGGGTaGGCAGTGAAGTCTGCCCAGCGCCAGGGAGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: TPVRSPTVSTRG*AVKSAQRQGDG Trigger: TCCGTCTCCCTGGCGCTGGGCAGACTTCACTGCCCACCCCCGGGTGCTGACTGTGGGGGACCGCACGGGTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CTGGGGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCTaGCCCTTGGCCATGGCTGCTCGGAGCTTCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGSVLRSPGRRS*PLAMAARSFCG Trigger: GCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACTCCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GTTGGCTGCACTGAGGTGCAGGGGGTGGCTCTGCCCTaGGGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VGCTEVQGVALP*GVYSGPQAAGA Trigger: AGCTCCTGCGGCCTGGGGACCTGAGTACACTCCCCAGGGCAGAGCCACCCCCTGCACCTCAGTGCAGCCAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | AGAAGCGTTTCTCCCTGGACGGTGCTGGTCACCACCTaGCGTACAGGTCCCCGCAGCTGGACGTGCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSVSPWTVLVTT*RTGPRSWTCPG Trigger: CCCTGGGCACGTCCAGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAACGCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | CAGAGCGGACGGCCAGAAGCGTTTCTCCCTGGACGGTaGTGGTCACCACCTGCCGTACAGGTCCCCGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSGRPEAFLPGR*WSPPAVQVPAA Trigger: AGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAACGCTTCTGGCCGTCCGCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | TGGGGGACAACTCCATCAGGTCCTCCAACCAGCGGCTaGAACGGGCACTGGCCTGAGGGGTCCAAGAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: WGTTPSGPPTSG*NGHWPEGSKRA Trigger: CGCCCTCTTGGACCCCTCAGGCCAGTGCCCGTTGCAGCCGCTGGTTGGAGGACCTGATGGAGTTGTCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GTGCTGGTCACCACCTGCCGTACAGGTCCCCGCAGCTaGACGTGCCCAGGGTTCTCAAGGATCCGGGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VLVTTCRTGPRS*TCPGFSRIRGL Trigger: CAACCCCCGGATCCTTGAGAACCCTGGGCACGTCCAGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | AGCGGACGGCCAGAAGCGTTTCTCCCTGGACGGTGCTaGTCACCACCTGCCGTACAGGTCCCCGCAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGRPEAFLPGRC*SPPAVQVPAAG Trigger: TCCAGCTGCGGGGACCTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAACGCTTCTGGCCGTCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | GTCCCCAGGCCGCAGGAGCTGGCCCTTGGCCATGGCTaGTCGGAGCTTCTGTGGCATGGTCTCTTGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPRPQELALGHG*SELLWHGLLAL Trigger: AAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGCGGCCTGGGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CCTAGGTACTGGGCAAGCAGCACCCGCTCTCCTTTCTaGCAGGCAGCCTCTGCTCCAGCGCGGAACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PRYWASSTRSPF*QAASAPARNSS Trigger: GCTGCTGTTCCGCGCTGGAGCAGAGGCTGCCTGCCAGAAAGGAGAGCGGGTGCTGCTTGCCCAGTACCTAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TCCCGGAGGGTCTGCCGGCGTTCACGCTTCACACCTTaGCCCCACACCTCCTGTGTCAACTCCTGGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRRVCRRSRFTP*PHTSCVNSWEG Trigger: ACCCTCCCAGGAGTTGACACAGGAGGTGTGGGGCCAAGGTGTGAAGCGTGAACGCCGGCAGACCCTCCGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTCCGCCGCTTAGGCCGCTTGGACTGGGTCTGGGTCTCGGAGGTCTCACCCGTCTGCAGCCCAGCTaGTGGGGTCCACAGACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSPPLRPLGLGLGLGGLTRLQPS*WGPQTN Trigger: GTTTGTCTGTGGACCCCACAAGCTGGGCTGCAGACG...GGTGAGACCTCCGAGACCCAGACCCAGTCCAAGCGGCCTAAGCGGCGGACTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | TGGGGAGGCTGGGAGCCAGAGTGGACAGGCGTCTGCTaGCTGAAAGACATGGTCTGGAGGCTAGAGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGGWEPEWTGVC*LKDMVWRLEAW Trigger: CCAGGCCTCTAGCCTCCAGACCATGTCTTTCAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCCTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTaGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PDPQATGAGPWS*LLGASVAWSPG Trigger: GCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTaGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGDVARSPSYRS*PLVVAARSFCG Trigger: GCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTaGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCCTEVQGVALP*RRSQIPKLQEL Trigger: CAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TGCAACGGGCACTGGCCTGAGGGGTCCAAGAGGGCGTaGACACCTGGTCCACTGAGGGTGCTGTTGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CNGHWPEGSKRA*TPGPLRVLLLA Trigger: AGCAAGCAACAGCACCCTCAGTGGACCAGGTGTCCACGCCCTCTTGGACCCCTCAGGCCAGTGCCCGTTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR TCA 72 bp | AAGGCAGAGAGGGATTCGGTGATGGAGGGCAGAGACTaGGGAGGCCCCGCCAGCTGTGGCATGGAAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KAERDSVMEGRD*GGPASCGMEVP Trigger: GGGAACTTCCATGCCACAGCTGGCGGGGCCTCCTCAGTCTCTGCCCTCCATCACCGAATCCCTCTCTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR TCA 72 bp | TCACCCGGCCTTCCCAGGCTTCTGTCAAGCGCTCAGTaGGCTCATCCTGTTGGCTGCACTGAGGTGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SPGLPRLLSSAQ*AHPVGCTEVQG Trigger: CCCCTGCACCTCAGTGCAGCCAACAGGATGAGCTCACTGAGCGCTTGACAGAAGCCTGGGAAGGCCGGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | TTCTGGGGAGGCTGGGAGCCAGAGTGGACAGGCGTCTaGTGCCTGAAAGACATGGTCTGGAGGCTAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FWGGWEPEWTGV*CLKDMVWRLEA Trigger: GGCCTCTAGCCTCCAGACCATGTCTTTCAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCCTCCCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CTCTTCTGCCGCTCCATGTGGCCCAGAAAACGGCGATaGGAGAAGGTCGGGGCGACCCACAATGGACGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFCRSMWPRKRR*EKVGATHNGRV Trigger: CACTCGTCCATTGTGGGTCGCCCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TGTGGCATGGTCTCTTGGCTCTTCTGCCGCTCCATGTaGCCCAGAAAACGGCGATGGGAGAAGGTCGGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: CGMVSWLFCRSM*PRKRRWEKVGA Trigger: CGCCCCGACCTTCTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GAGCTGGCCCTTGGCCATGGCTGCTCGGAGCTTCTGTaGCATGGTCTCTTGGCTCTTCTGCCGCTCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELALGHGCSELL*HGLLALLPLHV Trigger: CACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR TCA 72 bp | CCTGGAGTGTCCCTCTTAAGTGGCAGCTTGTCCGTGTaGTCCCGGAGGGTCTGCCGGCGTTCACGCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PGVSLLSGSLSV*SRRVCRRSRFT Trigger: TGTGAAGCGTGAACGCCGGCAGACCCTCCGGGATCACACGGACAAGCTGCCACTTAAGAGGGACACTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | GGGCTGAGGCTAATACCAGTGGCCCCTTTCTCCACCTaGATCACCTGCAGGAGTGCTGGTGGCCCCTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLRLIPVAPFST*ITCRSAGGPCL Trigger: TAAGCAGGGGCCACCAGCACTCCTGCAGGTGATGCAGGTGGAGAAAGGGGCCACTGGTATTAGCCTCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | GCTCGGAGCTTCTGTGGCATGGTCTCTTGGCTCTTCTaGCGCTCCATGTGGCCCAGAAAACGGCGATGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARSFCGMVSWLF*RSMWPRKRRWE Trigger: CTCCCATCGCCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTaGCATGGTCTCCTGGCTCTTTCTGCAGCTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: ELALGRGCSELL*HGLLALSAAPC Trigger: ACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | CTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTaGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSNPAALRCRG*LYPGDVARSPS Trigger: GCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GCCATGGCTGCTCGGAGCTTCTGTGGCATGGTCTCTTaGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACGG | + |
|
Preference number: 3 (lower is better) Translates to: AMAARSFCGMVS*LFCRSMWPRKR Trigger: CCGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TGGTGTAGCCACAGGTCCTGGAGTGTCCCTCTTAAGTaGCAGCTTGTCCGTGTGATCCCGGAGGGTCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: WCSHRSWSVPLK*QLVRVIPEGLP Trigger: CGGCAGACCCTCCGGGATCACACGGACAAGCTGCCACTTAAGAGGGACACTCCAGGACCTGTGGCTACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GCTAGAGGCCTGGGAGGGTGGTGTAGCCACAGGTCCTaGAGTGTCCCTCTTAAGTGGCAGCTTGTCCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARGLGGWCSHRS*SVPLKWQLVRV Trigger: CACACGGACAAGCTGCCACTTAAGAGGGACACTCCAGGACCTGTGGCTACACCACCCTCCCAGGCCTCTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TGCTGCCTGAAAGACATGGTCTGGAGGCTAGAGGCCTaGGAGGGTGGTGTAGCCACAGGTCCTGGAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CCLKDMVWRLEA*EGGVATGPGVS Trigger: GGACACTCCAGGACCTGTGGCTACACCACCCTCCCAGGCCTCTAGCCTCCAGACCATGTCTTTCAGGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTCCGCCGCTTAGGCCGCTTGGACTGGGTCTGGGTCTCGGAGGTCTCACCTGGACTGGTTCCCCATaGCTTCAGCCTAGTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LSPPLRPLGLGLGLGGLTWTGSP*LQPSST Trigger: TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCA...GGTGAGACCTCCGAGACCCAGACCCAGTCCAAGCGGCCTAAGCGGCGGACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | CTACACTGCTCACGTTTCCATGGGCACACTGCTCTCTaGATGGCAGAGGCAGAGGAGGCTCTGCCCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LHCSRFHGHTAL*MAEAEEALPWS Trigger: ACTCCAGGGCAGAGCCTCCTCTGCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTaGCTCTTTCTGCAGCTCCATGTGGCCCAGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VVAARSFCGMVS*LFLQLHVAQRM Trigger: CATTCTCTGGGCCACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GGAGTGCTGGTGGCCCCTGCTTATCAATCTTCCACGTaGCACAGTGATAGTCAGAGCGGACGGCCAGAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: GVLVAPAYQSST*HSDSQSGRPEA Trigger: CGCTTCTGGCCGTCCGCTCTGACTATCACTGTGCCACGTGGAAGATTGATAAGCAGGGGCCACCAGCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | GGCCCCTTTCTCCACCTGCATCACCTGCAGGAGTGCTaGTGGCCCCTGCTTATCAATCTTCCACGTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: GPFLHLHHLQEC*WPLLINLPRGT Trigger: TGTGCCACGTGGAAGATTGATAAGCAGGGGCCACCAGCACTCCTGCAGGTGATGCAGGTGGAGAAAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | ATTCGTGGCTTCTTCTGGGGAGGCTGGGAGCCAGAGTaGACAGGCGTCTGCTGCCTGAAAGACATGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IRGFFWGGWEPE*TGVCCLKDMVW Trigger: CCAGACCATGTCTTTCAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCCTCCCCAGAAGAAGCCACGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | CCTAGTTCTACACTGCTCACGTTTCCATGGGCACACTaGTCTCTGCATGGCAGAGGCAGAGGAGGCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSSTLLTFPWAH*SLHGRGRGGSA Trigger: GGCAGAGCCTCCTCTGCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAGAACTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | ATGACTGGTGCCTCCAGACGTTCCTGCAGCAGCTGCTaGTTCTTAGGTTCCAGCAGGGGAAAGGCAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MTGASRRSCSSC*FLGSSRGKAER Trigger: CCTCTCTGCCTTTCCCCTGCTGGAACCTAAGAAGCAGCAGCTGCTGCAGGAACGTCTGGAGGCACCAGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | ATCCGGGGGTTGCCACCTGAAGTCACACTGACCTCCTaGAAATACAGCTTGTCCAAGGCACCTCCACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IRGLPPEVTLTS*KYSLSKAPPLG Trigger: CCCTAGTGGAGGTGCCTTGGACAAGCTGTATTTCCAGGAGGTCAGTGTGACTTCAGGTGGCAACCCCCGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTTGGACTGGTTCCCCATaGCTTCAGCCTAGTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: RLLSSNPAALRCRGWLYPWTGSP*LQPSST Trigger: TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCA...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | CTAATACCAGTGGCCCCTTTCTCCACCTGCATCACCTaGAGGAGTGCTGGTGGCCCCTGCTTATCAATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LIPVAPFSTCIT*RSAGGPCLSIF Trigger: GAAGATTGATAAGCAGGGGCCACCAGCACTCCTGCAGGTGATGCAGGTGGAGAAAGGGGCCACTGGTATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | GGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTaGTCACGTTTCCATGGGCACACTGCTCTCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: GLVPHCFSLVLH*SRFHGHTALCM Trigger: CATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TTGCTTCAGCCTAGTTCTACACTGCTCACGTTTCCATaGGCACACTGCTCTCTGCATGGCAGAGGCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLQPSSTLLTFP*AHCSLHGRGRG Trigger: TCCTCTGCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAGAACTAGGCTGAAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | TCAAAGCGTCAATGCCTACTGAACCAATGTACACTGTaGCACAATCAACCTCCAACAGCTGACCCACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKRQCLLNQCTL*HNQPPTADPHW Trigger: CCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCACAGTGTACATTGGTTCAGTAGGCATTGACGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR CCA 72 bp | AGCTCTCGGGAATATCCTACCATCAAATACACGAAGTaGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: SSREYPTIKYTK*TGSPLLQPSST Trigger: TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATTTGATGGTAGGATATTCCCGAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| 3UTR GCA 72 bp | GGACAGGTTTATTCAGTCCCAGAGTCAAAGCGTCAATaGCTACTGAACCAATGTACACTGTGGCACAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQVYSVPESKRQ*LLNQCTLWHNQ Trigger: TTGATTGTGCCACAGTGTACATTGGTTCAGTAGGCATTGACGCTTTGACTCTGGGACTGAATAAACCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCGACGCAGCCGGCGGCTaGGGGAAGCCCAGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GWLYPGDVARSPSYRSWPDAAGG*GKPRDT Trigger: GGTGTCCCTGGGCTTCCCTCAGCCGCCGGCTGCGTC...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCCCCGGGGGTGGGCAGTaGAGTCTGCCCAGCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWLYPGDVARSPSYRSWPPGGGQ*SLPSAR Trigger: CCTGGCGCTGGGCAGACTTCACTGCCCACCCCCGGG...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCGGCAGCTTGTCCGTGTaGTCCCGGAGGGTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GWLYPGDVARSPSYRSWPGSLSV*SRRVCR Trigger: CCGGCAGACCCTCCGGGATCACACGGACAAGCTGCC...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | CCGCGCTGTCCTTCCGGGCAGCCAGGCCAACGCGCCCCCGGTGAAGGCCTCATCACAAGGTCGGATCCTTaGAGTTCTGTGGCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSGQPGQRAPGEGLITRSDP*SSVAGT Trigger: GGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGT...GATGAGGCCTTCACCGGGGGCGCGTTGGCCTGGCTGCCCGGAAGGACAGCGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGCAGCCAGGCCAACGCGCCCCCGGTGAAGGCCTCATCCATCAGCAGCTGCCGGCAGGCCAGTCCATaGCTGCTCTCTCATTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGSQANAPPVKASSISSCRQASP*LLSHWL Trigger: TAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCG...GCAGCTGCTGATGGATGAGGCCTTCACCGGGGGCGCGTTGGCCTGGCTGCCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTCAACGGGCACTGGCCTaGGGGGTCCAAGAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGDVARSPSYRSWPLVVAQRALA*GVQEGV Trigger: CACGCCCTCTTGGACCCCTCAGGCCAGTGCCCGTTG...AGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| 3UTR CAA 72 bp | AGTGTACTCAGGTCCCCAGGCCGCAGGAGCTGGCCCTaGGCCATGGCTGCTCGGAGCTTCTGTGGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLRSPGRRSWP*AMAARSFCGMV Trigger: GACCATGCCACAGAAGCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| 3UTR CAA 72 bp | ATCCCGGAGGGTCTGCCGGCGTTCACGCTTCACACCTaGGCCCCACACCTCCTGTGTCAACTCCTGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPEGLPAFTLHT*APHLLCQLLGG Trigger: CCCTCCCAGGAGTTGACACAGGAGGTGTGGGGCCAAGGTGTGAAGCGTGAACGCCGGCAGACCCTCCGGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCCCAACGCGCCCCCGGTaGAGGCCTCATCCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WRRSQIPKLQELALGRGCPTRPR*RPHPSA Trigger: TGCTGATGGATGAGGCCTTCACCGGGGGCGCGTTGG...GCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTTCCTGTTGGCTGCACTaGGGTGCAGGGGGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELALGRGCSELLWHGLLASCWLH*GAGGGS Trigger: AGAGCCACCCCCTGCACCTCAGTGCAGCCAACAGGA...AGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCCAGCTCCGGAACGGCTaGAGATGGCCAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWLYPGDVARSPSYRSWPQLRNG*RWPALL Trigger: CAGGAGAGCTGGCCATCTGCAGCCGTTCCGGAGCTG...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCGTCAGCACCCGGGGGTaGGCAGTGAAGTCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRRSQIPKLQELALGRGCVSTRG*AVKSAQ Trigger: CTGGGCAGACTTCACTGCCCACCCCCGGGTGCTGAC...GCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | CAACAGCTGACCCACACTGGGCTACCTCGGGGAGCACATGAGCTGGGGCATCTTCCAGGCCGCAGGAGCTaGCCCTTGGCCATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLTHTGLPRGAHELGHLPGRRS*PLAMAA Trigger: AGCAGCCATGGCCAAGGGCCAGCTCCTGCGGCCTGG...AAGATGCCCCAGCTCATGTGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTGTCCGCCGAGGTCCTaGAGCAGCTTCTTCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRRSQIPKLQELALGRGCCPPRS*SSFFAL Trigger: CAGCGCGAAGAAGCTGCTTCAGGACCTCGGCGGACA...GCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCGGCTGCCCTAGGTACTaGGCAAGCAGCACCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WRRSQIPKLQELALGRGCGCPRY*ASSTRS Trigger: AGAGCGGGTGCTGCTTGCCCAGTACCTAGGGCAGCC...GCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | AGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTCCGGCTGCTGAGAGCTaGAAGAGCAACAGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPSYRSWPLVVAARSFCPAAES*KSNSPG Trigger: CCCGGGGCTGTTGCTCTTCCAGCTCTCAGCAGCCGG...ACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | CCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTAGAGGCCTGGGAGGGTaGTGTAGCCACAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDPQATGAGPWSWLLGASRGLGG*CSHRSW Trigger: CCAGGACCTGTGGCTACACCACCCTCCCAGGCCTCT...AGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCCGGAAAAGGAAGTCCTaGGCTGTCACACCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWLYPGDVARSPSYRSWPRKRKS*AVTPGS Trigger: GGACCCTGGTGTGACAGCTCAGGACTTCCTTTTCCG...GGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGGGTAGAGCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACATGAGCTGGGGCATCTTTGAGGACAGGAGGCTAAGGCTACTTTCTAGCGACGCAGCCGGCGGCTaGGGGAAGCCCAGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: EHMSWGIFEDRRLRLLSSDAAGG*GKPRDT Trigger: GGTGTCCCTGGGCTTCCCTCAGCCGCCGGCTGCGTC...GCTAGAAAGTAGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTCATGTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGCCAGATCGCCCCTTTCTCCACCTaGATCACCTGCAGGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCCTEVQGVALPWRRSQIAPFST*ITCRSA Trigger: AGCACTCCTGCAGGTGATGCAGGTGGAGAAAGGGGC...GATCTGGCTACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTCTCATTGGCTACTTaGCCCCAGGGTTGGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELALGRGCSELLWHGLLALSLAT*PQGWCP Trigger: CGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAG...AGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR CCA 90 bp | CGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGAGAAGCGTTTCTCCCTaGACGGTGCTGGTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSQIPKLQELALGRGCSERSVSP*TVLVTT Trigger: GGTGGTGACCAGCACCGTCCAGGGAGAAACGCTTCT...CTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | CGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTGCAGCCCAGCTTGTaGGGTCCACAGACAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQIPKLQELALGRGCSELQPSL*GPQTNS Trigger: GCTGTTTGTCTGTGGACCCCACAAGCTGGGCTGCAG...CTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTACCCGCTCTCCTTTCTaGCAGGCAGCCTCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGDVARSPSYRSWPLVVATRSPF*QAASAP Trigger: TGGAGCAGAGGCTGCCTGCCAGAAAGGAGAGCGGGT...AGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCTGGAGTGGCTGAGCTCAGTGCAGCACTCCAGGATGAAGGCTAGGTTCGCAGGAGCTGGCCCTTaGCCATGGCTGCTCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SALEWLSSVQHSRMKARFAGAGP*PWLLGA Trigger: AGCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGC...GAACCTAGCCTTCATCCTGGAGTGCTGCACTGAGCTCAGCCACTCCAGGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGCTGGGAGCCAGAGTaGACAGGCGTCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPGWEPE*TGVCCL Trigger: CAGGCAGCAGACGCCTGTCCACTCTGGCTCCCAGCC...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| 3UTR CAA 72 bp | GACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTaGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVARSPSYRSWP*VVAARSFCGMV Trigger: GACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCACCTCGATGTCTCCTCCACCAGGCAGTCACCCGGCCTTCCCAGGCTTCTCTCCAGCTGCACATaGAGGACAGGTCAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHLDVSSTRQSPGLPRLLSSCT*RTGQGH Trigger: ATGGCCCTGACCTGTCCTTCATGTGCAGCTGGAGAG...AAGCCTGGGAAGGCCGGGTGACTGCCTGGTGGAGGAGACATCGAGGTGAGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCACAATCAACCTCCAACAGCTGACCCACACTGGGCTACCTCGGGGAGCATGCAGGGGGTGGCTCTaGCCTGGGGAGTGTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGTINLQQLTHTGLPRGACRGWL*PGECTQ Trigger: CTGAGTACACTCCCCAGGGCAGAGCCACCCCCTGCA...TGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | TGTGGCACAATCAACCTCCAACAGCTGACCCACACTGGGCTACCTCGGGGAGCATTGGCTGCACTGAGGTaGAGGGGGTGGCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGTINLQQLTHTGLPRGALAALR*RGWLCP Trigger: AGGGCAGAGCCACCCCCTGCACCTCAGTGCAGCCAA...TGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTTTCTGCAGCTCCATGTGGCTACGAGGGGCACTaGTGGCATCTGGGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCSELLWHGLLALSAAPCGYEGH*WHLGSP Trigger: TGGACTCCCCAGATGCCAGCAGTGCCCCTCGTAGCC...ACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTATCCTTGCAGTTCTGTaGCTGGGACCCTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGDVARSPSYRSWPLVVAILAVL*LGPWQG Trigger: ACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGAT...AGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTACAGGTCCCCGCAGCTaGACGTGCCCAGGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPTGPRS*TCPGFS Trigger: TGAGAACCCTGGGCACGTCCAGCTGCGGGGACCTGT...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTCTCCCTGGACGGTGCTaGTCACCACCTGCCGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPLPGRC*SPPAVQ Trigger: CTGTACGGCAGGTGGTGACCAGCACCGTCCAGGGAG...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | AGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCCGCCAGCTGTGGCATaGAAGTTCCCTCTCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSWPLVVAARSFCGMVSWPPAVA*KFPLLL Trigger: TAACAGGAGAGGGAACTTCCATGCCACAGCTGGCGG...CCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | CCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTTCCTGTGTCAACTCCTaGGAGGGTGGAACCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDPQATGAGPWSWLLGASSCVNS*EGGTLG Trigger: ACCCAGGGTTCCACCCTCCCAGGAGTTGACACAGGA...AGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | CCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTTCACGCTTCACACCTTaGCCCCACACCTCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGDVARSPSYRSWPLVVASRFTP*PHTSCV Trigger: GACACAGGAGGTGTGGGGCCAAGGTGTGAAGCGTGA...AGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | TGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCATTCGTGGCTTCTTCTaGGGAGGCTGGGAGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WRRSQIPKLQELALGRGCIRGFF*GGWEPE Trigger: CTCTGGCTCCCAGCCTCCCCAGAAGAAGCCACGAAT...GCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTGCCCAGCGCCAGGGAGACGGATCACGGAAGGCAAGCGTCTCGGTGTCCTGGCTGCTCTCTCATTaGCTACTTGCCCCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSAQRQGDGSRKASVSVSWLLSH*LLAPRV Trigger: AACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCA...GGACACCGAGACGCTTGCCTTCCGTGATCCGTCTCCCTGGCGCTGGGCAGACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| 3UTR CAA 72 bp | GGCCATGGCTGCTCGGAGCTTCTGTGGCATGGTCTCTaGGCTCTTCTGCCGCTCCATGTGGCCCAGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: GHGCSELLWHGL*ALLPLHVAQKT Trigger: CGTTTTCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAGAAGCTCCGAGCAGCCATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCAGTAGCTTCCCCATaGGTAGTGACACTGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGDVARSPSYRSWPLVVAAVASP*VVTLTC Trigger: GCAGGTCAGTGTCACTACTCATGGGGAAGCTACTGC...AGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGACGTAGCCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCAGCTCTCCTGACAGGTaGGGGCTGAGGCTAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: WRRSQIPKLQELALGRGCSSPDR*GLRLIP Trigger: TGGTATTAGCCTCAGCCCTCACCTGTCAGGAGAGCT...GCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGGCTACGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR TCA 90 bp | CCAGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTCAGCCCGGTGGGCCCTaGATGTCAACCATTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PDPQATGAGPWSWLLGASQPGGP*MSTIFT Trigger: TGTGAAAATGGTTGACATTCAGGGCCCACCGGGCTG...AGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | CAACAGCTGACCCACACTGGGCTACCTCGGGGAGCACATGAGCTGGGGCATCTTATCCTTGCAGTTCTGTaGCTGGGACCCTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQLTHTGLPRGAHELGHLILAVL*LGPWQG Trigger: ACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGAT...AAGATGCCCCAGCTCATGTGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACAATCAACCTCCAACAGCTGACCCACACTGGGCTACCTCGGGGAGCACAGCCCACAGCCCGGTaGGCCCTGAATGTCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGTINLQQLTHTGLPRGAQPTAR*ALNVNH Trigger: ATGGTTGACATTCAGGGCCCACCGGGCTGTGGGCTG...TGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTTGGAGGCTAGAGGCCTaGGAGGGTGGTGTAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPWRLEA*EGGVAT Trigger: TGTGGCTACACCACCCTCCCAGGCCTCTAGCCTCCA...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| 3UTR CAA 72 bp | CGTCTCGGTGTCCTTGTAGATCGTCTGCAGCCCAGCTaGTGGGGTCCACAGACAAACAGCTCCGGAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLGVLVDRLQPS*WGPQTNSSGTA Trigger: AGCCGTTCCGGAGCTGTTTGTCTGTGGACCCCACAAGCTGGGCTGCAGACGATCTACAAGGACACCGAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTCTCTCCAGCTGCACATaGAGGACAGGTCAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPLSSCT*RTGQGH Trigger: ATGGCCCTGACCTGTCCTTCATGTGCAGCTGGAGAG...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGCAGTAGCTTCCCCATaGGTAGTGACACTGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPSYRSWPLVVAARSFCAVASP*VVTLTC Trigger: GCAGGTCAGTGTCACTACTCATGGGGAAGCTACTGC...ACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCTGGAGTGGCTGAGCTCAGTGCAGCACTCCAGGATGAAGGCTAGGTTCCATCACCTGCAGGAGTaGTGGTGGCCCCTGCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SALEWLSSVQHSRMKARFHHLQE*WWPLLI Trigger: GATAAGCAGGGGCCACCAGCACTCCTGCAGGTGATG...GAACCTAGCCTTCATCCTGGAGTGCTGCACTGAGCTCAGCCACTCCAGGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACAATCAACCTCCAACAGCTGACCCACACTGGGCTACCTCGGGGAGCAGCTGCTCCCAGCGCATaGCCAGCTCTTCATGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CGTINLQQLTHTGLPRGAAAPSA*PALHAV Trigger: TACTGCATGAAGAGCTGGCCATGCGCTGGGAGCAGC...TGCTCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | TCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTACACCTGCAGGAGTGCTaGTGGCCCCTGCTTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNPAALRCRGWLYPGDVHLQEC*WPLLIN Trigger: ATTGATAAGCAGGGGCCACCAGCACTCCTGCAGGTG...TACGTCTCCAGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCTGGAGTGGCTGAGCTCAGTGCAGCACTCCAGGATGAAGGCTAGGTTCGGCACTGCTGGCATCTaGGGAGTCCAGGTAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SALEWLSSVQHSRMKARFGTAGI*GVQVAC Trigger: ACAAGCTACCTGGACTCCCCAGATGCCAGCAGTGCC...GAACCTAGCCTTCATCCTGGAGTGCTGCACTGAGCTCAGCCACTCCAGGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTACAAGGTCGGATCCTTaGAGTTCTGTGGCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPTRSDP*SSVAGT Trigger: GGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGT...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTTCCTGCAGCAGCTGCTaGTTCTTAGGTTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPSCSSC*FLGSSR Trigger: CCTGCTGGAACCTAAGAAGCAGCAGCTGCTGCAGGA...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR GCA 90 bp | TCTGCCCTGGAGTGGCTGAGCTCAGTGCAGCACTCCAGGATGAAGGCTAGGTTCGCCTCCAGACGTTCCTaGAGCAGCTGCTGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SALEWLSSVQHSRMKARFASRRS*SSCCFL Trigger: TAAGAAGCAGCAGCTGCTGCAGGAACGTCTGGAGGC...GAACCTAGCCTTCATCCTGGAGTGCTGCACTGAGCTCAGCCACTCCAGGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | GAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTGTCACACTGACCTCCTaGAAATACAGCTTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELALGRGCSELLWHGLLAVTLTS*KYSLSK Trigger: CTTGGACAAGCTGTATTTCCAGGAGGTCAGTGTGAC...AGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTGATGAGATGCAGAGATaGAGGGGTCTGACCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNPAALRCRGWLYPDEMQR*RGLTWL Trigger: CAGCCAGGTCAGACCCCTCCATCTCTGCATCTCATC...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| 3UTR CAA 72 bp | AGCTGGACGTGCCCAGGGTTCTCAAGGATCCGGGGGTaGCCACCTGAAGTCACACTGACCTCCTGGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SWTCPGFSRIRG*PPEVTLTSWKY Trigger: GTATTTCCAGGAGGTCAGTGTGACTTCAGGTGGCAACCCCCGGATCCTTGAGAACCCTGGGCACGTCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS-3UTR TCA 90 bp | GAGCACATGAGCTGGGGCATCTTTGAGGACAGGAGGCTAAGGCTACTTTCTAGCCGGAAAAGGAAGTCCTaGGCTGTCACACCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHMSWGIFEDRRLRLLSSRKRKS*AVTPGS Trigger: GGACCCTGGTGTGACAGCTCAGGACTTCCTTTTCCG...GCTAGAAAGTAGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTCATGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| CDS-3UTR CCA 90 bp | GGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTTTCTGCAGCTCCATGTTGCTGTTGCTTGCTCTaGCACCTTTCTAGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCSELLWHGLLALSAAPCCCCLL*HLSRTG Trigger: TCCAGTCCTAGAAAGGTGCCAGAGCAAGCAACAGCA...ACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CCA 90 bp | TCTACACTGCTCACGTTTCCATGGGCACACTGCTCTCTGCATGGCAGAGGCAGATCAGAAGCCCATTCGTaGCTTCTTCTGGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLLTFPWAHCSLHGRGRSEAHS*LLLGRL Trigger: CAGCCTCCCCAGAAGAAGCCACGAATGGGCTTCTGA...TCTGCCTCTGCCATGCAGAGAGCAGTGTGCCCATGGAAACGTGAGCAGTGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR TCA 90 bp | ACCATCAAATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACAATGGAGGGCAGAGACTaGGGAGGCCCCGCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TIKYTKWTGSPLLQPSSTMEGRD*GGPASC Trigger: ACAGCTGGCGGGGCCTCCTCAGTCTCTGCCCTCCAT...TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATTTGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR TCA 90 bp | AATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTGCTCAGACATCCCCGGCTGCTaGGAGCTGGAAGAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRSGLVPHCFSLVLHCSDIPGC*ELEEQQ Trigger: CTGTTGCTCTTCCAGCTCTCAGCAGCCGGGGATGTC...TGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR TCA 90 bp | AATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTGCTCAAAGGTGCTAGACAACTaGGTCCGCCGCTTAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NTRSGLVPHCFSLVLHCSKVLDN*VRRLGR Trigger: GCGGCCTAAGCGGCGGACTCAGTTGTCTAGCACCTT...TGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | ACCATCAAATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACATTTCTCCCTGGACGGTaGTGGTCACCACCTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TIKYTKWTGSPLLQPSSTFLPGR*WSPPAV Trigger: TACGGCAGGTGGTGACCAGCACCGTCCAGGGAGAAA...TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATTTGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR GCA 90 bp | AATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTGCTCACGTTCCTGCAGCAGCTaGTGCTTCTTAGGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTRSGLVPHCFSLVLHCSRSCSS*CFLGSS Trigger: GCTGGAACCTAAGAAGCAGCAGCTGCTGCAGGAACG...TGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR GCA 90 bp | ACCATCAAATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACAGTCTCTTGGCTCTTCTaGCGCTCCATGTGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TIKYTKWTGSPLLQPSSTVSWLF*RSMWPR Trigger: TCTGGGCCACATGGAGCGGCAGAAGAGCCAAGAGAC...TGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATTTGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS-3UTR CAA 90 bp | CCGGGCAGCCAGGCCAACGCGCCCCCGGTGAAGGCCTCATCCATCAGCAGCTGCTCTCTCATTGGCTACTaGCCCCCAGGGTTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSQANAPPVKASSISSCSLIGY*PPGLVS Trigger: GGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGA...GCAGCTGCTGATGGATGAGGCCTTCACCGGGGGCGCGTTGGCCTGGCTGCCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS TCA 90 bp | TCAGGACAGGACCCCCAACGATGGAGAAGCGACGCAGCCGGCGGCTaGGGGAAGCCCAGGGACACCTGGTCAGTGTCCCAGGTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGQDPQRWRSDAAGG*GKPRDTWSVSQVLP Trigger: TGGAAGGACCTGGGACACTGACCAGGTGTCCCTGGGCTTCCCTCAGCCGCCGGCTGCGTCGCTTCTCCATCGTTGGGGGTCCTGTCCTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCCTGGGGAGTGTACTCAGGTCCCCAGGCCGCAGGAGCTGGCCCTTGGCCAATGGCTGCTCTCTCATaGGCTACTTGCCCCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPWGVYSGPQAAGAGPWPMAALS*ATCPQG Trigger: ACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCAT...TGGCCAAGGGCCAGCTCCTGCGGCCTGGGGACCTGAGTACACTCCCCAGGGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS GCA 90 bp | AGCCAGGCCAACGCGCCCCCGGTGAAGGCCTCATCCATCAGCAGCTaGTCCCAGCGCATGGCCAGCTCTTCATGCAGTAGCTTCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SQANAPPVKASSISS*SQRMASSSCSSFPM Trigger: CATGGGGAAGCTACTGCATGAAGAGCTGGCCATGCGCTGGGAGCAGCTGCTGATGGATGAGGCCTTCACCGGGGGCGCGTTGGCCTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CAA 90 bp | GGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTTTCTGCAGCTCCATGTCGCAGGAGCTGGCCCTaGGCCATGGCTGCTCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCSELLWHGLLALSAAPCRRSWP*AMAARS Trigger: GCTCCGAGCAGCCATGGCCAAGGGCCAGCTCCTGCG...ACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS TCA 90 bp | GTGGCTGGGACCCTGGCAGGGTCAGTGCATCTCTCCAGCTGCACATaGAGGACAGGTCAGGGCCATCAGTCATGCCAAGTGGACCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VAGTLAGSVHLSSCT*RTGQGHQSCQVDRP Trigger: AGGCCGGTCCACTTGGCATGACTGATGGCCCTGACCTGTCCTTCATGTGCAGCTGGAGAGATGCACTGACCCTGCCAGGGTCCCAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| CDS GCA 90 bp | AGTGTCCCAGGTCCTTCCACATCTCACGGCAGGCCAGTCCATGGCTaGTCTCTCATTGGCTACTTGCCCCCAGGGTTGGTGTCCGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVPGPSTSHGRPVHG*SLIGYLPPGLVSAE Trigger: CTCGGCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCGTGAGATGTGGAAGGACCTGGGACACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS CCA 90 bp | GGTCAGTGTCCCAGGTCCTTCCACATCTCACGGCAGGCCAGTCCATaGCTGCTCTCTCATTGGCTACTTGCCCCCAGGGTTGGTGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GQCPRSFHISRQASP*LLSHWLLAPRVGVR Trigger: GCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCGTGAGATGTGGAAGGACCTGGGACACTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS CCA 90 bp | TCCTTCCACATCTCACGGCAGGCCAGTCCATGGCTGCTCTCTCATTaGCTACTTGCCCCCAGGGTTGGTGTCCGCCGAGGTCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFHISRQASPWLLSH*LLAPRVGVRRGPEA Trigger: TGCTTCAGGACCTCGGCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCGTGAGATGTGGAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS-3UTR CAA 90 bp | GAGCACATGAGCTGGGGCATCTTTGAGGACAGGAGGCTAAGGCTACTTTCTAGCGGGACACCCCCAGGGTaGGTGTCCGCCGAGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EHMSWGIFEDRRLRLLSSGTPPG*VSAEVL Trigger: CAGGACCTCGGCGGACACCAACCCTGGGGGTGTCCC...GCTAGAAAGTAGCCTTAGCCTCCTGTCCTCAAAGATGCCCCAGCTCATGTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CAA 90 bp | AGGCTACTTTCTAGCAACCCTGCTGCACTGAGGTGCAGGGGGTGGCTCTACCCTCGTCTGCAGCCCAGCTaGTGGGGTCCACAGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLSSNPAALRCRGWLYPRLQPS*WGPQTN Trigger: GTTTGTCTGTGGACCCCACAAGCTGGGCTGCAGACG...AGGGTAGAGCCACCCCCTGCACCTCAGTGCAGCAGGGTTGCTAGAAAGTAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CAA 90 bp | AGATCCCCAAGCTACAGGAGCTGGCCCTTGGTCGTGGCTGCTCGGAGCTTCTGTCCACTGAGGGTGCTGTaGCTTGCTCTGGCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSPSYRSWPLVVAARSFCPLRVL*LALAPF Trigger: GAAAGGTGCCAGAGCAAGCAACAGCACCCTCAGTGG...ACAGAAGCTCCGAGCAGCCACGACCAAGGGCCAGCTCCTGTAGCTTGGGGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS CCA 90 bp | GGCAAAGGACAAGGTCGGATCCTTGCAGTTCTGTGGCTGGGACCCTaGCAGGGTCAGTGCATCTCTCCAGCTGCACATGAAGGACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKGQGRILAVLWLGP*QGQCISPAAHEGQV Trigger: GACCTGTCCTTCATGTGCAGCTGGAGAGATGCACTGACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGTCCTTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| CDS-3UTR CAA 90 bp | GGCTGCTCGGAGCTTCTGTGGCATGGTCTCCTGGCTCTTTCTGCAGCTCCATGTCTGTGGCATGGTCTCTaGGCTCTTCTGCCGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCSELLWHGLLALSAAPCLWHGL*ALLPLH Trigger: ATGGAGCGGCAGAAGAGCCAAGAGACCATGCCACAG...ACATGGAGCTGCAGAAAGAGCCAGGAGACCATGCCACAGAAGCTCCGAGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS GCA 90 bp | GCCTCATCCATCAGCAGCTGCTCCCAGCGCATGGCCAGCTCTTCATaGAGTAGCTTCCCCATGAGTAGTGACACTGACCTGCTCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ASSISSCSQRMASSS*SSFPMSSDTDLLRT Trigger: TGTCCTGAGCAGGTCAGTGTCACTACTCATGGGGAAGCTACTGCATGAAGAGCTGGCCATGCGCTGGGAGCAGCTGCTGATGGATGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS-3UTR CAA 90 bp | AAGGCTAGGTTCTCAGATATGGCTTTCCCCACTCAGAAGCCCATTCGTGGCTTCTACTTGCCCCCAGGGTaGGTGTCCGCCGAGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KARFSDMAFPTQKPIRGFYLPPG*VSAEVL Trigger: CAGGACCTCGGCGGACACCAACCCTGGGGGCAAGTA...GAAGCCACGAATGGGCTTCTGAGTGGGGAAAGCCATATCTGAGAACCTAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS CCA 90 bp | AGGTTCTTGGCAAAGGACAAGGTCGGATCCTTGCAGTTCTGTGGCTaGGACCCTGGCAGGGTCAGTGCATCTCTCCAGCTGCACATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RFLAKDKVGSLQFCG*DPGRVSASLQLHMK Trigger: CTTCATGTGCAGCTGGAGAGATGCACTGACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGTCCTTTGCCAAGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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| CDS-3UTR CAA 90 bp | AATACACGAAGTGGACTGGTTCCCCATTGCTTCAGCCTAGTTCTACACTGCTCATTCACGCTTCACACCTaGGCCCCACACCTCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NTRSGLVPHCFSLVLHCSFTLHT*APHLLC Trigger: ACACAGGAGGTGTGGGGCCAAGGTGTGAAGCGTGAA...TGAGCAGTGTAGAACTAGGCTGAAGCAATGGGGAACCAGTCCACTTCGTGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS GCA 72 bp | AACGCGCCCCCGGTGAAGGCCTCATCCATCAGCAGCTaGTCCCAGCGCATGGCCAGCTCTTCATGCAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: NAPPVKASSISS*SQRMASSSCSS Trigger: GCTACTGCATGAAGAGCTGGCCATGCGCTGGGAGCAGCTGCTGATGGATGAGGCCTTCACCGGGGGCGCGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
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| CDS CAA 72 bp | CATCTCACGGCAGGCCAGTCCATGGCTGCTCTCTCATaGGCTACTTGCCCCCAGGGTTGGTGTCCGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLTAGQSMAALS*ATCPQGWCPPR Trigger: CCTCGGCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCGTGAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS GCA 72 bp | GGTCCTTCCACATCTCACGGCAGGCCAGTCCATGGCTaGTCTCTCATTGGCTACTTGCCCCCAGGGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPSTSHGRPVHG*SLIGYLPPGLV Trigger: CACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCGTGAGATGTGGAAGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS CAA 72 bp | CATGGCTGCTCTCTCATTGGCTACTTGCCCCCAGGGTaGGTGTCCGCCGAGGTCCTGAAGCAGCTTCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: HGCSLIGYLPPG*VSAEVLKQLLR Trigger: GCGAAGAAGCTGCTTCAGGACCTCGGCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS CAA 90 bp | AGGCCAGTCCATGGCTGCTCTCTCATTGGCTACTTGCCCCCAGGGTaGGTGTCCGCCGAGGTCCTGAAGCAGCTTCTTCGCGCTGACTAT | + |
|
Preference number: 6 (lower is better) Translates to: RPVHGCSLIGYLPPG*VSAEVLKQLLRADY Trigger: ATAGTCAGCGCGAAGAAGCTGCTTCAGGACCTCGGCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
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| CDS CAA 90 bp | ACATCTCACGGCAGGCCAGTCCATGGCTGCTCTCTCATTGGCTACTaGCCCCCAGGGTTGGTGTCCGCCGAGGTCCTGAAGCAGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSHGRPVHGCSLIGY*PPGLVSAEVLKQLL Trigger: AAGAAGCTGCTTCAGGACCTCGGCGGACACCAACCCTGGGGGCAAGTAGCCAATGAGAGAGCAGCCATGGACTGGCCTGCCGTGAGATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS CCA 72 bp | GCAAAGGACAAGGTCGGATCCTTGCAGTTCTGTGGCTaGGACCCTGGCAGGGTCAGTGCATCTCTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AKDKVGSLQFCG*DPGRVSASLQL Trigger: CAGCTGGAGAGATGCACTGACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGTCCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS TCA 72 bp | CAGGGACACCCCCAGGGTTGGTGTCCGCCGAGGTCCTaGAGCAGCTTCTTCGCGCTGACTATAGTCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QGHPQGWCPPRS*SSFFALTIVIF Trigger: AAAGATGACTATAGTCAGCGCGAAGAAGCTGCTTCAGGACCTCGGCGGACACCAACCCTGGGGGTGTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS TCA 72 bp | AGCGCATGGCCAGCTCTTCATGCAGTAGCTTCCCCATaGGTAGTGACACTGACCTGCTCAGGACAGGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SAWPALHAVASP*VVTLTCSGQDP Trigger: GGGGTCCTGTCCTGAGCAGGTCAGTGTCACTACTCATGGGGAAGCTACTGCATGAAGAGCTGGCCATGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093099.13 |
||
| CDS TCA 72 bp | GCTACTTGCCCCCAGGGTTGGTGTCCGCCGAGGTCCTaGAGCAGCTTCTTCGCGCTGACTATAGTCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ATCPQGWCPPRS*SSFFALTIVIF Trigger: AAAGATGACTATAGTCAGCGCGAAGAAGCTGCTTCAGGACCTCGGCGGACACCAACCCTGGGGGCAAGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147964.8 |
||
| CDS GCA 72 bp | ACAGTAGGTTCTTGGCAAAGGACAAGGTCGGATCCTTaGAGTTCTGTGGCTGGGACCCTGGCAGGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVGSWQRTRSDP*SSVAGTLAGSV Trigger: CACTGACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGTCCTTTGCCAAGAACCTACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
||
| CDS CAA 72 bp | CACAGTAGGTTCTTGGCAAAGGACAAGGTCGGATCCTaGCAGTTCTGTGGCTGGGACCCTGGCAGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSRFLAKDKVGS*QFCGWDPGRVS Trigger: ACTGACCCTGCCAGGGTCCCAGCCACAGAACTGCAAGGATCCGACCTTGTCCTTTGCCAAGAACCTACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093099.13 ENSMUST00000147964.8 |
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