Pregenerated sensors for TAF1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059669Ensembl transcript IDs: ENSMUST00000075954.9, ENSMUST00000221372.2, ENSMUST00000222710.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCCTCTGCCAGAGCAAGGAGAGAGAGCAGAGAGCAAGTGTCCTaGGCACCGTCATCTTCACAAGCCCCTTCTCCTTCCGCTCGGAGT | + |
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Preference number: 1 (lower is better) Translates to: FPSARARRESREQVS*APSSSQAPSPSARS Trigger: ACTCCGAGCGGAAGGAGAAGGGGCTTGTGAAGATGACGGTGCCCAGGACACTTGCTCTCTGCTCTCTCTCCTTGCTCTGGCAGAGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 90 bp | CTCGGAGTACTCCACTCCATCAACAGAGCCAGAGCAGACAGACGCTaGCTTTGGGGATCCTTTGGTGACAGGGAAAGGCTTTGGAATCTG | + |
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Preference number: 1 (lower is better) Translates to: LGVLHSINRARADRR*LWGSFGDRERLWNL Trigger: CAGATTCCAAAGCCTTTCCCTGTCACCAAAGGATCCCCAAAGTCAGCGTCTGTCTGCTCTGGCTCTGTTGATGGAGTGGAGTACTCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR GCA 90 bp | CACTTTCAAGGGGGCATGTGGTATCACTTAGCAGCTCAAGATCACTaGCCAAGTCCGAGGACTGCACACTGTCTTCTAATACCTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: HFQGGMWYHLAAQDH*PSPRTAHCLLIPWL Trigger: AAGCCAAGGTATTAGAAGACAGTGTGCAGTCCTCGGACTTGGGCAGTGATCTTGAGCTGCTAAGTGATACCACATGCCCCCTTGAAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR CCA 90 bp | TCAGGGTCCAGGGCTCACCTTGGCTTTCCTTCCACTTGTACGAACTaGGTTTTTACAATAGGCCTGTTTGCTCTTCTGAAGGTAGCGCTT | + |
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Preference number: 1 (lower is better) Translates to: SGSRAHLGFPSTCTN*VFTIGLFALLKVAL Trigger: AAGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTAAAAACCCAGTTCGTACAAGTGGAAGGAAAGCCAAGGTGAGCCCTGGACCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR TCA 90 bp | CCATGGAAACAAGGGCTATCAGTGCCTTCTTCAGTCCAGTTGAACTaGAAACTTGAAGGGGCCTGCTTTTCAACCACGGGTGATGAACCA | + |
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Preference number: 1 (lower is better) Translates to: PWKQGLSVPSSVQLN*KLEGACFSTTGDEP Trigger: TGGTTCATCACCCGTGGTTGAAAAGCAGGCCCCTTCAAGTTTTCAGTTCAACTGGACTGAAGAAGGCACTGATAGCCCTTGTTTCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 90 bp | GTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTaGGAACGCCTGTCAAAGCCCCTCTCTGGTTCTCAGTGTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VCLFNSRLHTVDTLS*ERLSKPLSGSQCLL Trigger: AAGAAGACACTGAGAACCAGAGAGGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR CCA 90 bp | GAGTTCTTGGTTATCATGGACTGGCCTTTCATTATCAGGAGTCCCTaGAGGCTGTGTCCATGGAAACAAGGGCTATCAGTGCCTTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: EFLVIMDWPFIIRSP*RLCPWKQGLSVPSS Trigger: TGAAGAAGGCACTGATAGCCCTTGTTTCCATGGACACAGCCTCCAGGGACTCCTGATAATGAAAGGCCAGTCCATGATAACCAAGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 90 bp | GGGCGTGTCTTCTCTGTGTTGTTCGTTGTACGCTTCAGCAAGATCTaGGTAAGACCATTCCAGCTTGTCATCCAGCAAAAACAGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GRVFSVLFVVRFSKI*VRPFQLVIQQKQQL Trigger: AAGCTGCTGTTTTTGCTGGATGACAAGCTGGAATGGTCTTACTCAGATCTTGCTGAAGCGTACAACGAACAACACAGAGAAGACACGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 90 bp | AACGTCAGAAAATCCACTTCCCCAATTCCAGTCAACTTTACTACTTaGCAGGTTAAAGTGTGCATTTCATCAGGGAGATTGACCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: NVRKSTSPIPVNFTT*QVKVCISSGRLTSS Trigger: ACTGGAGGTCAATCTCCCTGATGAAATGCACACTTTAACCTGTCAAGTAGTAAAGTTGACTGGAATTGGGGAAGTGGATTTTCTGACGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCTGGGCACCGTCATCTTCACAAGCCCCTTCTCCTTCCGCTCGGAGTACTTGGGGATCCTTTGGTaGCAGGGAAAGGCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SVLGTVIFTSPFSFRSEYLGILW*QGKALE Trigger: TTCCAAAGCCTTTCCCTGTCACCAAAGGATCCCCAA...GTACTCCGAGCGGAAGGAGAAGGGGCTTGTGAAGATGACGGTGCCCAGGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR CAA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTaGACACCTTGTCCTGAGAACGCCTGTCAAAGCCCCTCTCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: THAKVYACSTVDFTQ*TPCPENACQSPSLV Trigger: AACCAGAGAGGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
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| 3UTR CAA 90 bp | GTGTCTCATGTCAGGGTCCAGGGCTCACCTTGGCTTTCCTTCCACTaGTACGAACTGGGTTTTTACAATAGGCCTGTTTGCTCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VSHVRVQGSPWLSFH*YELGFYNRPVCSSE Trigger: TTCAGAAGAGCAAACAGGCCTATTGTAAAAACCCAGTTCGTACAAGTGGAAGGAAAGCCAAGGTGAGCCCTGGACCCTGACATGAGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTAGTGTCTCATGTCAGGGTCCAGGGCTCACCTTGGCTTTCCTTCCACTTGTACAATAGGCCTGTTTaGTCTTCTGAAGGTAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: ILVSHVRVQGSPWLSFHLYNRPV*SSEGSA Trigger: AGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTA...CAAGTGGAAGGAAAGCCAAGGTGAGCCCTGGACCCTGACATGAGACACTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR CAA 90 bp | CCGAGGACTGCACACTGTCTTCTAATACCTTGGCTTTCCTTCCACTaGTACGAACTGGGTTTTTACAATAGGCCTGTTTGCTCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PRTAHCLLIPWLSFH*YELGFYNRPVCSSE Trigger: TTCAGAAGAGCAAACAGGCCTATTGTAAAAACCCAGTTCGTACAAGTGGAAGGAAAGCCAAGGTATTAGAAGACAGTGTGCAGTCCTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTTTCAAGGGGGCATGTaGTATCACTTAGCAGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: CQSVCLFNSRLHTVDTLSFQGGM*YHLAAQ Trigger: TTGAGCTGCTAAGTGATACCACATGCCCCCTTGAAA...GGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGATGTCTTCATAGTCAGGCCAAGACTCTATAGCAAAGATGCCTTTGTCACGAGAGAGCAAGTGTCCTaGGCACCGTCATCTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: IDVFIVRPRLYSKDAFVTREQVS*APSSSQ Trigger: TTGTGAAGATGACGGTGCCCAGGACACTTGCTCTCT...CGTGACAAAGGCATCTTTGCTATAGAGTCTTGGCCTGACTATGAAGACATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGATCATTCTGGATTGCACCAGGAGCCTCCTCCCTGAAAATCTACAGGCAATTCTGCCACACAAAGTaGATTTTAGTGTCTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: SRSFWIAPGASSLKIYRQFCHTK*ILVSHV Trigger: GACATGAGACACTAAAATTCACTTTGTGTGGCAGAA...TTGCCTGTAGATTTTCAGGGAGGAGGCTCCTGGTGCAATCCAGAATGATCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACACATGCCAAAGTGTATaGCTGTTCAACAGTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: VYACSTVDFTQLTPCPENTCQSV*LFNSRL Trigger: AAGTCTACTGTTGAACAGGCATACACTTTGGCATGT...GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAAACAGCAGCTTCAACACAACCACAATGACAGCCATAGCCTGCACATCAACATGCCAAAGTGTATaGCTGTTCAACAGTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: SKNSSFNTTTMTAIACTSTCQSV*LFNSRL Trigger: AAGTCTACTGTTGAACAGGCATACACTTTGGCATGT...TGATGTGCAGGCTATGGCTGTCATTGTGGTTGTGTTGAAGCTGCTGTTTTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCATATAAAGACACATaGCAAAGTGTATGCCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VYACSTVDFTQLTPCPENAYKDT*QSVCLF Trigger: GAACAGGCATACACTTTGGCATGTGTCTTTATATGC...GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTCAAGTAAGCTCACTTCTTCATGGAGAGCAGAGGTCTTTATTCTCAGTCGCTTCAGCAAGATCTaGGTAAGACCATTCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FFSSKLTSSWRAEVFILSRFSKI*VRPFQL Trigger: AAGCTGGAATGGTCTTACTCAGATCTTGCTGAAGCG...ACTGAGAATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTTACTTGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTTCTTTTCAAGTAAGCTCACTTCTTCATGGAGAGCAGAGGTCTTTATTCTCAGTCCAGTTGAACTaGAAACTTGAAGGGGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: KVSFQVSSLLHGEQRSLFSVQLN*KLEGAC Trigger: GCAGGCCCCTTCAAGTTTTCAGTTCAACTGGACTGA...GAATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTTACTTGAAAAGAAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTTCTTTTCAAGTAAGCTCACTTCTTCATGGAGAGCAGAGGTCTTTATTCTTTTCCAAGCATACCTaGCCCTCGCTTCTTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: KVSFQVSSLLHGEQRSLFFSKHT*PSLLPI Trigger: AATGGGAAGAAGCGAGGGCCAGGTATGCTTGGAAAA...GAATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTTACTTGAAAAGAAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTCAAGTAAGCTCACTTCTTCATGGAGAGCAGAGGTCTTTATTCTCAGTAATACAGGGAGTTCTTaGTTATCATGGACTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: FFSSKLTSSWRAEVFILSNTGSS*LSWTGL Trigger: AAGGCCAGTCCATGATAACCAAGAACTCCCTGTATT...ACTGAGAATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTTACTTGAAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTTACAATAGGCCTGTTTaGTCTTCTGAAGGTAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: ISYNAYKDTCQSVCLFNSYNRPV*SSEGSA Trigger: AGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTA...ACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTCAAGTAAGCTCACTTCTTCATGGAGAGCAGAGGTCTTTATTCTCAGTTGTCTTCTAATACCTTaGCTTTCCTTCCACTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: FFSSKLTSSWRAEVFILSCLLIP*LSFHLY Trigger: GTACAAGTGGAAGGAAAGCCAAGGTATTAGAAGACA...ACTGAGAATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTTACTTGAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | CTCCACTCCATCAACAGAGCCAGAGCAGACAGACGCTaGCTTTGGGGATCCTTTGGTGACAGGGAAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LHSINRARADRR*LWGSFGDRERL Trigger: AAGCCTTTCCCTGTCACCAAAGGATCCCCAAAGTCAGCGTCTGTCTGCTCTGGCTCTGTTGATGGAGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | CAGAGCAGACAGACGCTGACTTTGGGGATCCTTTGGTaGCAGGGAAAGGCTTTGGAATCTGAGGGTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: QSRQTLTLGILW*QGKALESEGQI Trigger: AATCTGACCCTCAGATTCCAAAGCCTTTCCCTGTCACCAAAGGATCCCCAAAGTCAGCGTCTGTCTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR GCA 72 bp | GGGGGCATGTGGTATCACTTAGCAGCTCAAGATCACTaGCCAAGTCCGAGGACTGCACACTGTCTTCTAATA | + |
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Preference number: 3 (lower is better) Translates to: GGMWYHLAAQDH*PSPRTAHCLLI Trigger: TATTAGAAGACAGTGTGCAGTCCTCGGACTTGGGCAGTGATCTTGAGCTGCTAAGTGATACCACATGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | GGGGATCCTTTGGTGACAGGGAAAGGCTTTGGAATCTaGGGGTCAGATTGGAACTCTGCTTCACTTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: GDPLVTGKGFGI*GSDWNSASLSR Trigger: CCTTGAAAGTGAAGCAGAGTTCCAATCTGACCCTCAGATTCCAAAGCCTTTCCCTGTCACCAAAGGATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | CAAGGGCTATCAGTGCCTTCTTCAGTCCAGTTGAACTaGAAACTTGAAGGGGCCTGCTTTTCAACCACGGGT | + |
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Preference number: 3 (lower is better) Translates to: QGLSVPSSVQLN*KLEGACFSTTG Trigger: ACCCGTGGTTGAAAAGCAGGCCCCTTCAAGTTTTCAGTTCAACTGGACTGAAGAAGGCACTGATAGCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | TTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTaGGAACGCCTGTCAAAGCCCCTCTCTGGTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FNSRLHTVDTLS*ERLSKPLSGSQ Trigger: CTGAGAACCAGAGAGGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | CTAGATCATTCTGGATTGCACCAGGAGCCTCCTCCCTaGAAATCTACAGGCAAGCACCACAGTCAAACTCAA | + |
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Preference number: 3 (lower is better) Translates to: LDHSGLHQEPPP*KSTGKHHSQTQ Trigger: TTGAGTTTGACTGTGGTGCTTGCCTGTAGATTTTCAGGGAGGAGGCTCCTGGTGCAATCCAGAATGATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGACTTTGGGGATCCTTaGGTGACAGGGAAAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: VYACSTVDFTQLTPCPENDFGDP*VTGKGF Trigger: AAAGCCTTTCCCTGTCACCAAAGGATCCCCAAAGTC...GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGTAGACTTCACACAGTaGACACCTTGTCCTGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: VYACSTVDFTQLTPCPENVDFTQ*TPCPEN Trigger: GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTAC...GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
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| 3UTR CCA 72 bp | AGGGCTCACCTTGGCTTTCCTTCCACTTGTACGAACTaGGTTTTTACAATAGGCCTGTTTGCTCTTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RAHLGFPSTCTN*VFTIGLFALLK Trigger: CTTCAGAAGAGCAAACAGGCCTATTGTAAAAACCCAGTTCGTACAAGTGGAAGGAAAGCCAAGGTGAGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR CCA 72 bp | ATTTTAGTGTCTCATGTCAGGGTCCAGGGCTCACCTTaGCTTTCCTTCCACTTGTACGAACTGGGTTTTTAC | + |
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Preference number: 3 (lower is better) Translates to: ILVSHVRVQGSP*LSFHLYELGFY Trigger: GTAAAAACCCAGTTCGTACAAGTGGAAGGAAAGCCAAGGTGAGCCCTGGACCCTGACATGAGACACTAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR CCA 72 bp | CCAAGTCCGAGGACTGCACACTGTCTTCTAATACCTTaGCTTTCCTTCCACTTGTACGAACTGGGTTTTTAC | + |
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Preference number: 3 (lower is better) Translates to: PSPRTAHCLLIP*LSFHLYELGFY Trigger: GTAAAAACCCAGTTCGTACAAGTGGAAGGAAAGCCAAGGTATTAGAAGACAGTGTGCAGTCCTCGGACTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGATGTCTTCATAGTCAGGCCAAGACTCTATAGCAAAGATGCCTTTGTCACGGTAGACTTCACACAGTaGACACCTTGTCCTGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: IDVFIVRPRLYSKDAFVTVDFTQ*TPCPEN Trigger: GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTAC...CGTGACAAAGGCATCTTTGCTATAGAGTCTTGGCCTGACTATGAAGACATCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR CCA 72 bp | AAATGGCCACAATTCACTGTAAAGTCTAGATCATTCTaGATTGCACCAGGAGCCTCCTCCCTGAAAATCTAC | + |
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Preference number: 3 (lower is better) Translates to: KWPQFTVKSRSF*IAPGASSLKIY Trigger: GTAGATTTTCAGGGAGGAGGCTCCTGGTGCAATCCAGAATGATCTAGACTTTACAGTGAATTGTGGCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
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| 3UTR TCA 72 bp | TTCTCTGTGTTGTTCGTTGTACGCTTCAGCAAGATCTaGGTAAGACCATTCCAGCTTGTCATCCAGCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: FSVLFVVRFSKI*VRPFQLVIQQK Trigger: TTTTTGCTGGATGACAAGCTGGAATGGTCTTACTCAGATCTTGCTGAAGCGTACAACGAACAACACAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR GCA 72 bp | CACTTGTACGAACTGGGTTTTTACAATAGGCCTGTTTaGTCTTCTGAAGGTAGCGCTTCCAAAAATTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: HLYELGFYNRPV*SSEGSASKNCV Trigger: TACACAATTTTTGGAAGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTAAAAACCCAGTTCGTACAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000221372.2 ENSMUST00000222710.2 |
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| 3UTR GCA 72 bp | AGCAGCTTCAACACAACCACAATGACAGCCATAGCCTaGACATCATATTTAACTGTCCTTTTCGTTTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SSFNTTTMTAIA*TSYLTVLFVLA Trigger: AGCTAAAACGAAAAGGACAGTTAAATATGATGTGCAGGCTATGGCTGTCATTGTGGTTGTGTTGAAGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR TCA 72 bp | AAATCCACTTCCCCAATTCCAGTCAACTTTACTACTTaGCAGGTTAAAGTGTGCATTTCATCAGGGAGATTG | + |
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Preference number: 3 (lower is better) Translates to: KSTSPIPVNFTT*QVKVCISSGRL Trigger: CAATCTCCCTGATGAAATGCACACTTTAACCTGTCAAGTAGTAAAGTTGACTGGAATTGGGGAAGTGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR-3UTR CAA 90 bp | TGCACATCATATTTAACTGTCCTTTTCGTTTTAGCTATAGGATCAAACGTCAGAAATCTGAGGGTCAGATaGGAACTCTGCTTCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: CTSYLTVLFVLAIGSNVRNLRVR*ELCFTF Trigger: GAAAGTGAAGCAGAGTTCCAATCTGACCCTCAGATT...TCTGACGTTTGATCCTATAGCTAAAACGAAAAGGACAGTTAAATATGATGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR CCA 72 bp | TCAAAAAGTTTCTTTTCAAGTAAGCTCACTTCTTCATaGAGAGCAGAGGTCTTTATTCTCAGTAAGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SKSFFSSKLTSS*RAEVFILSKKE Trigger: CTCCTTCTTACTGAGAATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTTACTTGAAAAGAAACTTTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
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| 3UTR GCA 72 bp | ATTCAAAGCATTTCTTACAATGCATATAAAGACACATaGCAAAGTGTATGCCTGTTCAACAGTAGACTTCAC | + |
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Preference number: 3 (lower is better) Translates to: IQSISYNAYKDT*QSVCLFNSRLH Trigger: GTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAATGCTTTGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
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| CDS-3UTR TCA 90 bp | TGGGCACCGTCATCTTCACAAGCCCCTTCTCCTTCCGCTCGGAGTACTCCACTCGAGACAGCAGCACACTaGGAACAGCGGTCTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WAPSSSQAPSPSARSTPLETAAH*EQRSLN Trigger: GTTCAGAGACCGCTGTTCTCAGTGTGCTGCTGTCTC...GAGTGGAGTACTCCGAGCGGAAGGAGAAGGGGCTTGTGAAGATGACGGTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCAAGATCACTGCCCAAGTCCGAGGACTGCACACTGTCTTCTAATACCTTGGGTGTTGGGGATATCTaGAGCGCTCACCACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSLPKSEDCTLSSNTLGVGDI*SAHHFL Trigger: GAGGAAGTGGTGAGCGCTGCAGATATCCCCAACACC...CAAGGTATTAGAAGACAGTGTGCAGTCCTCGGACTTGGGCAGTGATCTTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTAGTGTCTCATGTCAGGGTCCAGGGCTCACCTTGGCTTTCCTTCCACTTGGGTGTTGGGGATATCTaGAGCGCTCACCACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILVSHVRVQGSPWLSFHLGVGDI*SAHHFL Trigger: GAGGAAGTGGTGAGCGCTGCAGATATCCCCAACACC...CAAGTGGAAGGAAAGCCAAGGTGAGCCCTGGACCCTGACATGAGACACTAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
||
| 3UTR CAA 72 bp | GGTGACAGGGAAAGGCTTTGGAATCTGAGGGTCAGATaGGAACTCTGCTTCACTTTCAAGGGGGCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDRERLWNLRVR*ELCFTFKGACG Trigger: ACCACATGCCCCCTTGAAAGTGAAGCAGAGTTCCAATCTGACCCTCAGATTCCAAAGCCTTTCCCTGTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221372.2 |
||
| CDS-3UTR GCA 90 bp | GTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCCTGTCAAAGCCCCTCTGTAATTGTTTCCCTCTaGCAGAGCAAGGAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDFTQLTPCPENACQSPSVIVSL*QSKERE Trigger: CTCTCTCTCCTTGCTCTGGCAGAGGGAAACAATTAC...AGAGGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTGAGACAGCAGCACACTaGGAACAGCGGTCTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HAKVYACSTVDFTQLTPCETAAH*EQRSLN Trigger: GTTCAGAGACCGCTGTTCTCAGTGTGCTGCTGTCTC...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
||
| 3UTR CAA 72 bp | AAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTaGACACCTTGTCCTGAGAACGCCTGTCAAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVYACSTVDFTQ*TPCPENACQSP Trigger: GGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
||
| CDS-3UTR TCA 90 bp | GTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACTCAGTCCAGTTGAACTaGAAACTTGAAGGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYACSTVDFTQLTPCPENSVQLN*KLEGAC Trigger: GCAGGCCCCTTCAAGTTTTCAGTTCAACTGGACTGA...GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | TCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCCTGTCAAAGCATTATCAGGAGTCCCTaGAGGCTGTGTCCATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STVDFTQLTPCPENACQSIIRSP*RLCPWK Trigger: TTTCCATGGACACAGCCTCCAGGGACTCCTGATAAT...GCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR GCA 90 bp | GTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCCTGTCAAAGCCCCTCTCTTGGTGATAAAGTATaGACTGGAAACCTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VDFTQLTPCPENACQSPSLGDKV*TGNLHT Trigger: TGTGTGAAGGTTTCCAGTGCATACTTTATCACCAAG...AGAGGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGGAGGCTGTGTCCATaGAAACAAGGGCTATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: THAKVYACSTVDFTQLTPWRLCP*KQGLSV Trigger: CACTGATAGCCCTTGTTTCCATGGACACAGCCTCCA...AGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | AAAAACGCCTTTGTCTTTCTGCCACACAAAGTGAATTTTAGTGTCTCATGTCAGGAGACAGCAGCACACTaGGAACAGCGGTCTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNAFVFLPHKVNFSVSCQETAAH*EQRSLN Trigger: GTTCAGAGACCGCTGTTCTCAGTGTGCTGCTGTCTC...CTGACATGAGACACTAAAATTCACTTTGTGTGGCAGAAAGACAAAGGCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222710.2 |
||
| CDS-3UTR TCA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTGGACTTATCGATGTGTaGACGGTAGAGTGGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: THAKVYACSTVDFTQLTPGLIDV*TVEWPF Trigger: AAAAGGCCACTCTACCGTTCACACATCGATAAGTCC...AGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR GCA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTAAACTTGAAGGGGCCTaGTTTTCAACCACGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: THAKVYACSTVDFTQLTPKLEGA*FSTTGD Trigger: ATCACCCGTGGTTGAAAAGCAGGCCCCTTCAAGTTT...AGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTTTTTCCAAGCATACCTaGCCCTCGCTTCTTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HAKVYACSTVDFTQLTPCFSKHT*PSLLPI Trigger: AATGGGAAGAAGCGAGGGCCAGGTATGCTTGGAAAA...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR GCA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTTACAATAGGCCTGTTTaGTCTTCTGAAGGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAKVYACSTVDFTQLTPCYNRPV*SSEGSA Trigger: AGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTA...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTTTTCAAGGGGGCATGTaGTATCACTTAGCAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HAKVYACSTVDFTQLTPCFQGGM*YHLAAQ Trigger: TTGAGCTGCTAAGTGATACCACATGCCCCCTTGAAA...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | TCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCCTGTCAAAGCAAACCTCAAAAGGTCTaGAACTGTAATTGTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STVDFTQLTPCPENACQSKPQKV*NCNCFP Trigger: AGGGAAACAATTACAGTTTCAGACCTTTTGAGGTTT...GCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | TGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTTTCATCAGGGAGATTaGCCTCCAGTAAGTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CQSVCLFNSRLHTVDTLSFHQGD*PPVSIS Trigger: TGAAATACTTACTGGAGGTCAATCTCCCTGATGAAA...GGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAGGTGTTGGGGATATCTaGAGCGCTCACCACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVGVGDI*SAHHFL Trigger: GAGGAAGTGGTGAGCGCTGCAGATATCCCCAACACC...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCAAGCTCACTTCTTCATaGAGAGCAGAGGTCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CQSVCLFNSRLHTVDTLSKLTSS*RAEVFI Trigger: AATAAAGACCTCTGCTCTCCATGAAGAAGTGAGCTT...GGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR GCA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTATGACAGCCATAGCCTaGACATCATATTTAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: THAKVYACSTVDFTQLTPMTAIA*TSYLTV Trigger: GACAGTTAAATATGATGTGCAGGCTATGGCTGTCAT...AGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTTGTCTTCTAATACCTTaGCTTTCCTTCCACTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HAKVYACSTVDFTQLTPCCLLIP*LSFHLY Trigger: GTACAAGTGGAAGGAAAGCCAAGGTATTAGAAGACA...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTTGGTTATCATGGACTaGCCTTTCATTATCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: THAKVYACSTVDFTQLTPLVIMD*PFIIRS Trigger: ACTCCTGATAATGAAAGGCCAGTCCATGATAACCAA...AGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTTTGGGGATCCTTTGGTaGCAGGGAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISYNAYKDTCQSVCLFNSLGILW*QGKALE Trigger: TTCCAAAGCCTTTCCCTGTCACCAAAGGATCCCCAA...ACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAAGAGAGCAAGTGTCCTaGGCACCGTCATCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVREQVS*APSSSQ Trigger: TTGTGAAGATGACGGTGCCCAGGACACTTGCTCTCT...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTACGCTTCAGCAAGATCTaGGTAAGACCATTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVRFSKI*VRPFQL Trigger: AAGCTGGAATGGTCTTACTCAGATCTTGCTGAAGCG...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAGGTAGAGTGGCCTTTTaGTTTTCCAAGCATACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVGRVAF*FSKHTW Trigger: CCAGGTATGCTTGGAAAACCAAAAGGCCACTCTACC...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAGGTCTCCAGGGCTTTTaGTTGGTGATAAAGTATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVGLQGF*LVIKYA Trigger: TGCATACTTTATCACCAAGCAAAAGCCCTGGAGACC...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAAATACAGGGAGTTCTTaGTTATCATGGACTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVNTGSS*LSWTGL Trigger: AAGGCCAGTCCATGATAACCAAGAACTCCCTGTATT...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTATTTATGTACGGAATATaGTCCTCTTCAACAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVFMYGI*SSSTNL Trigger: GAGGTTTGTTGAAGAGGATCATATTCCGTACATAAA...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAAGTTCTTGGTTATCATaGACTGGCCTTTCATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTMHIKTHAKVYACSTVSSWLS*TGLSLS Trigger: TGATAATGAAAGGCCAGTCCATGATAACCAAGAACT...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS GCA 90 bp | GGCTTACTCCGAGGGTCTCCAGGGCTTTTGCTTGGTGATAAAGTATaGACTGGAAACCTTCACACACATACCAATCCCAGCCTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLLRGSPGLLLGDKV*TGNLHTHTNPSLSH Trigger: ATGAGAAAGGCTGGGATTGGTATGTGTGTGAAGGTTTCCAGTGCATACTTTATCACCAAGCAAAAGCCCTGGAGACCCTCGGAGTAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | TCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCCTGTCAAAGCCCCCTGTTGATGGAGTaGATCTTGGTGTTGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: STVDFTQLTPCPENACQSPLLME*ILVLGI Trigger: TATCCCCAACACCAAGATCAACTCCATCAACAGGGG...GCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCAGCCTTTCTCATGCTaGCTTCTCTGTCTCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HAKVYACSTVDFTQLTPCQPFSC*LLCLSP Trigger: GGGGCTGAGACAGAGAAGCAAGCATGAGAAAGGCTG...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | GTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGCCTGTCAAAGCCCCTCTAATCTGAGGGTCAGATaGGAACTCTGCTTCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VDFTQLTPCPENACQSPSNLRVR*ELCFTF Trigger: GAAAGTGAAGCAGAGTTCCAATCTGACCCTCAGATT...AGAGGGGCTTTGACAGGCGTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | GTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCTGAGAACGGGTCTCCAGGGCTTTaGCTTGGTGATAAAGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: VYACSTVDFTQLTPCPENGSPGL*LGDKVC Trigger: GCATACTTTATCACCAAGCAAAAGCCCTGGAGACCC...GTTCTCAGGACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | CATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTGTCCCCTGTTGATGGAGTaGATCTTGGTGTTGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HAKVYACSTVDFTQLTPCPLLME*ILVLGI Trigger: TATCCCCAACACCAAGATCAACTCCATCAACAGGGG...ACAAGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTTTACAATAGGCCTGTTTGCTCTTCTGAAGGTAGCGCTTCCAAAAATTGTCCCCTGTTGATGGAGTaGATCTTGGTGTTGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: GFYNRPVCSSEGSASKNCPLLME*ILVLGI Trigger: TATCCCCAACACCAAGATCAACTCCATCAACAGGGG...ACAATTTTTGGAAGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTAAAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000221372.2 ENSMUST00000222710.2 |
||
| CDS-3UTR CAA 90 bp | ACACATGCCAAAGTGTATGCCTGTTCAACAGTAGACTTCACACAGTTGACACCTTCTCTGTGTTGTTCGTaGTACGCTTCAGCAAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: THAKVYACSTVDFTQLTPSLCCS*YASARS Trigger: AGATCTTGCTGAAGCGTACAACGAACAACACAGAGA...AGGTGTCAACTGTGTGAAGTCTACTGTTGAACAGGCATACACTTTGGCATGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS GCA 90 bp | CTTTCCTTCCACTTGTACGAACTGGGTTTTTACAATAGGCCTGTTTaGTCTTCTGAAGGTAGCGCTTCCAAAAATTGTGTAAGACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSFHLYELGFYNRPV*SSEGSASKNCVRLH Trigger: ATGAAGTCTTACACAATTTTTGGAAGCGCTACCTTCAGAAGAGCAAACAGGCCTATTGTAAAAACCCAGTTCGTACAAGTGGAAGGAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTGACTTTGGGGATCCTTaGGTGACAGGGAAAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISYNAYKDTCQSVCLFNSDFGDP*VTGKGF Trigger: AAAGCCTTTCCCTGTCACCAAAGGATCCCCAAAGTC...ACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTACTCCAGGGCTTTTGCTaGGTGATAAAGTATGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLTMHIKTHAKVYACSTVLQGFC*VIKYAL Trigger: CAGTGCATACTTTATCACCAAGCAAAAGCCCTGGAG...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTTACAATGCATATAAAGACACATGCCAAAGTGTATGCCTGTTCAACAGTAAACCAGGGCACTAAATaGTTTTTGAAGATTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLTMHIKTHAKVYACSTVNQGTK*FLKILH Trigger: GTGGAGAATCTTCAAAAACAATTTAGTGCCCTGGTT...TACTGTTGAACAGGCATACACTTTGGCATGTGTCTTTATATGCATTGTAAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS CAA 90 bp | CCTTTCTCATGCTTGCTTCTCTGTCTCAGCCCCCTGTTGATGGAGTaGATCTTGGTGTTGGGGATATCTGCAGCGCTCACCACTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PFSCLLLCLSPLLME*ILVLGISAALTTSS Trigger: TGAGGAAGTGGTGAGCGCTGCAGATATCCCCAACACCAAGATCAACTCCATCAACAGGGGGCTGAGACAGAGAAGCAAGCATGAGAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
||
| CDS GCA 72 bp | CCTGTTGATGGAGTTGATCTTGGTGTTGGGGATATCTaGAGCGCTCACCACTTCCTCAGATCGATCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVDGVDLGVGDI*SAHHFLRSICD Trigger: GTCACAGATCGATCTGAGGAAGTGGTGAGCGCTGCAGATATCCCCAACACCAAGATCAACTCCATCAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 ENSMUST00000222710.2 |
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| CDS GCA 72 bp | CGAGGGTCTCCAGGGCTTTTGCTTGGTGATAAAGTATaGACTGGAAACCTTCACACACATACCAATCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RGSPGLLLGDKV*TGNLHTHTNPS Trigger: GCTGGGATTGGTATGTGTGTGAAGGTTTCCAGTGCATACTTTATCACCAAGCAAAAGCCCTGGAGACCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
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| CDS CAA 90 bp | CTTCATTCTTTAGTTCTGGGCTTACTCCGAGGGTCTCCAGGGCTTTaGCTTGGTGATAAAGTATGCACTGGAAACCTTCACACACATACC | + |
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Preference number: 6 (lower is better) Translates to: LHSLVLGLLRGSPGL*LGDKVCTGNLHTHT Trigger: GGTATGTGTGTGAAGGTTTCCAGTGCATACTTTATCACCAAGCAAAAGCCCTGGAGACCCTCGGAGTAAGCCCAGAACTAAAGAATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075954.9 |
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| CDS TCA 72 bp | TATCTGCAGCGCTCACCACTTCCTCAGATCGATCTGTaGCATTGTGGCAGGAAGTACAGTAATATTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: YLQRSPLPQIDL*HCGRKYSNICL Trigger: AAGGCAAATATTACTGTACTTCCTGCCACAATGTCACAGATCGATCTGAGGAAGTGGTGAGCGCTGCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075954.9 ENSMUST00000221372.2 ENSMUST00000222710.2 |
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