Pregenerated sensors for TAF1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072258Ensembl transcript IDs: ENSMUST00000192076.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAAACAGGTGGGAGGGAGGCCGAGCGCCTCCTCCAGGTCTCAGTaGGGGTCTCAAAGCCAGGCTCCTGCAGCGAGTGACACAGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: NKQVGGRPSASSRSQ*GSQSQAPAASDTAD Trigger: GTCAGCTGTGTCACTCGCTGCAGGAGCCTGGCTTTGAGACCCTCACTGAGACCTGGAGGAGGCGCTCGGCCTCCCTCCCACCTGTTTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR GCA 90 bp | CTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTaGTTACTTACTCAGTGCCTGCAGGACGCTACTTCATGGATAGAG | + |
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Preference number: 1 (lower is better) Translates to: LQSPGCLWPWEAVPL*LLTQCLQDATSWIE Trigger: CTCTATCCATGAAGTAGCGTCCTGCAGGCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR CCA 90 bp | TCTTCTAGCACTCTGACTCAAATCAGTCCTCTAGAGTCAAAGGACTaGAGAGTCACATGGTGTCACCTCCTCCTCCTCCTCGACTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: SSSTLTQISPLESKD*RVTWCHLLLLLDSL Trigger: TAGAGAGTCGAGGAGGAGGAGGAGGTGACACCATGTGACTCTCCAGTCCTTTGACTCTAGAGGACTGATTTGAGTCAGAGTGCTAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR CCA 90 bp | ATGAGGAAATGTGTGGTTTGTCTCCTGAGCCCCAGTGAGCCTTCCTaGAATCCAAGTACTTTAACAATAACTACAAGGCAGCCAAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: MRKCVVCLLSPSEPS*NPSTLTITTRQPRS Trigger: TGACCTTGGCTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCTCAGGAGACAAACCACACATTTCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTCTTCTAGCTTCCACATaGGCATGTGCACAAGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: MSYRAQGVSGLGKLSRCALLAST*ACAQVR Trigger: ACGCACTTGTGCACATGCGCATGTGGAAGCTAGAAG...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCACTCAGAAATCTGCCTaGCTCTGCCTCCTGGGATTA | + |
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Preference number: 2 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCTQKSA*LCLLGL Trigger: TAATCCCAGGAGGCAGAGGCAGGCAGATTTCTGAGT...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTCTGGATTCTCATTTCTaGGGGAACATCCAAGTATCC | + |
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Preference number: 2 (lower is better) Translates to: MSYRAQGVSGLGKLSRCALDSHF*GNIQVS Trigger: GGATACTTGGATGTTCCCTCAGAAATGAGAATCCAG...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTCAGGACGCTACTTCATaGATAGAGATGCTACTGTTG | + |
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Preference number: 2 (lower is better) Translates to: MSYRAQGVSGLGKLSRCAQDATS*IEMLLL Trigger: CAACAGTAGCATCTCTATCCATGAAGTAGCGTCCTG...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTTCCTCCAGGTCTCAGTaGGGGTCTCAAAGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: AGFSFLREHPSILAHHAFSSRSQ*GSQSQA Trigger: AGCCTGGCTTTGAGACCCTCACTGAGACCTGGAGGA...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGGCACCCATCAGCACATaGGCTACAGAGCCCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SPSEPSWNPSTLTITTRQAPIST*ATEPRV Trigger: CACCCTGGGCTCTGTAGCTCATGTGCTGATGGGTGC...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTAGACTGGAGAGTCACATaGTGTCACCTCCTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AFKVNHISSSTLTQISPLDWRVT*CHLLLL Trigger: GAGGAGGAGGAGGTGACACCATGTGACTCTCCAGTC...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR GCA 72 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTaGTTACTTACTCAGTGCCTGCAGGACGCTACTTCA | + |
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Preference number: 3 (lower is better) Translates to: PGCLWPWEAVPL*LLTQCLQDATS Trigger: TGAAGTAGCGTCCTGCAGGCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR CCA 72 bp | CCATCAGCACATGAGCTACAGAGCCCAGGGTGTCTCTaGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACT | + |
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Preference number: 3 (lower is better) Translates to: PSAHELQSPGCL*PWEAVPLCLLT Trigger: AGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCATGTGCTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR CCA 72 bp | ATCAGTCCTCTAGAGTCAAAGGACTGGAGAGTCACATaGTGTCACCTCCTCCTCCTCCTCGACTCTCTACCC | + |
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Preference number: 3 (lower is better) Translates to: ISPLESKDWRVT*CHLLLLLDSLP Trigger: GGGTAGAGAGTCGAGGAGGAGGAGGAGGTGACACCATGTGACTCTCCAGTCCTTTGACTCTAGAGGACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGAGGGTGTCTCTGGCCTaGGGAAGCTGTCCCGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SPSEPSWNPSTLTITTRQRVSLA*GSCPAV Trigger: CACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCT...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR CCA 72 bp | ACTCTGACTCAAATCAGTCCTCTAGAGTCAAAGGACTaGAGAGTCACATGGTGTCACCTCCTCCTCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: TLTQISPLESKD*RVTWCHLLLLL Trigger: GAGGAGGAGGAGGAGGTGACACCATGTGACTCTCCAGTCCTTTGACTCTAGAGGACTGATTTGAGTCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| 3UTR CCA 72 bp | TGTGTGGTTTGTCTCCTGAGCCCCAGTGAGCCTTCCTaGAATCCAAGTACTTTAACAATAACTACAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: CVVCLLSPSEPS*NPSTLTITTRQ Trigger: CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCTCAGGAGACAAACCACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTCGCCCAAAAGAAGCTaGAGTGAAAAGCTGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: MSYRAQGVSGLGKLSRCASPKRS*SEKLAT Trigger: GGTGGCCAGCTTTTCACTTCAGCTTCTTTTGGGCGA...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCAGCCAAGTCAGTGTCTaGCTTCCAGTCACTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCSQVSV*LPVTLR Trigger: GCGAAGAGTGACTGGAAGGCAGACACTGACTTGGCT...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCATATACTCTGCAGCTTaGTGCCACTGGTGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCIYSAA*CHWCFS Trigger: GCTGAAGCACCAGTGGCAGCAAGCTGCAGAGTATAT...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTGCTTGCTGCCACTGGTaGTTCAGCAGGGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGFSFLREHPSILAHHAFACCHW*FSRASW Trigger: CCAGGAAGCCCTGCTGAAGCACCAGTGGCAGCAAGC...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCGGGGGTTTTGACCAGTaGACAGATATTTGTAGACGT | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCGGFDQ*TDICRR Trigger: ACGTCTACAAATATCTGTGCACTGGTCAAAACCCCC...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCCCGTTATGTTCTTATTaGATCCAGCGAAGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCPLCSY*IQRSPG Trigger: TCCTGGACTTCGCTGGATGCAATAAGAACATAACGG...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTGCAGCTTGCTGCCACTaGTGCTTCAGCAGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGFSFLREHPSILAHHAFAACCH*CFSRAS Trigger: GGAAGCCCTGCTGAAGCACCAGTGGCAGCAAGCTGC...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCGACAAGCCCAGTTTCTaGTGTTCTTCTGTGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCDKPSF*CSSVSD Trigger: ATCAGACACAGAAGAACACCAGAAACTGGGCTTGTC...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTCATCAAGCATTCCATaGTGTAAAAGATACAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: MSYRAQGVSGLGKLSRCASSSIP*CKRYKA Trigger: CGCCTTGTATCTTTTACATCATGGAATGCTTGATGA...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCTTCAGCAGGGCTTCCTaGATAAAGCTTAAACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCFSRAS*IKLKQA Trigger: TGCTTGTTTAAGCTTTATCCAGGAAGCCCTGCTGAA...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTTACTTACTCAGTGCGTGTTCTTCTGTGTCTaGTTTTCTAAGCAATGTATG | + |
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Preference number: 4 (lower is better) Translates to: PGCLWPWEAVPLCLLTQCVFFCV*FSKQCM Trigger: CATACATTGCTTAGAAAATCAGACACAGAAGAACAC...GCACTGAGTAAGTAAGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTACTGTGCATATACTCTaGAGCTTGCTGCCACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGFSFLREHPSILAHHAFTVHIL*SLLPLV Trigger: CACCAGTGGCAGCAAGCTGCAGAGTATATGCACAGT...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTATTCCAAGCTTCCAAATaGTCTCAGGGGCAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AFKVNHISSSTLTQISPLFQASK*SQGQPV Trigger: GACAGGCTGCCCCTGAGATCATTTGGAAGCTTGGAA...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTCATATGCATAATTGGTaGGCATCTCTCGGGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: AGFSFLREHPSILAHHAFHMHNW*ASLGLH Trigger: ATGGAGCCCGAGAGATGCTCACCAATTATGCATATG...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTTTCTGGGTTATCCTCTaGCACAGCCAGCTTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: AGFSFLREHPSILAHHAFFWVIL*HSQLCQ Trigger: TTGACAAAGCTGGCTGTGGCAGAGGATAACCCAGAA...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | GCTGGATTCTCATTTCTGAGGGAACATCCAAGTATCCTAGCACACCACGCCTTTATACCTCCACGTCTCTaGCTTACTCAGGTTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: AGFSFLREHPSILAHHAFIPPRL*LTQVPV Trigger: AACAGGAACCTGAGTAAGGCAGAGACGTGGAGGTAT...AAAGGCGTGGTGTGCTAGGATACTTGGATGTTCCCTCAGAAATGAGAATCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGCAAAAGAAGCTGAAGTaGAAAGCTGGCCACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SPSEPSWNPSTLTITTRQQKKLK*KAGHQF Trigger: GAACTGGTGGCCAGCTTTTCACTTCAGCTTCTTTTG...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTATCTTCAACCCACTCGTaGTGGCTTCCCACTAATATC | + |
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Preference number: 4 (lower is better) Translates to: AFKVNHISSSTLTQISPLSSTHS*WLPTNI Trigger: GATATTAGTGGGAAGCCATCACGAGTGGGTTGAAGA...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGGTGCTTGTGAAGCCATaGGAAATGCATTCCCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SPSEPSWNPSTLTITTRQVLVKP*EMHSRF Trigger: AAAACGGGAATGCATTTCCCATGGCTTCACAAGCAC...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTAAAGCCTGAACAAGGTTaGTCAACACTTCCTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AFKVNHISSSTLTQISPLKPEQG*STLPEK Trigger: CTTCTCAGGAAGTGTTGATCAACCTTGTTCAGGCTT...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGACTCCATCTTCTTTCTaGTCCAAGTGTAGTACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SPSEPSWNPSTLTITTRQTPSSF*SKCSTA Trigger: TGCAGTACTACACTTGGACCAGAAAGAAGATGGAGT...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGATCTTCATCAAGCTTTaGCAACTCCATCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPSEPSWNPSTLTITTRQIFIKL*QLHLLS Trigger: AGAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGAT...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGGAACTTCTCATCATATaGATAATTGGTGAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: SPSEPSWNPSTLTITTRQELLII*IIGEHL Trigger: GAGATGCTCACCAATTATGCATATGATGAGAAGTTC...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR GCA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTACTTCCCACTAATATCTaGTTCAGATACTTTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: AFKVNHISSSTLTQISPLLPTNI*FRYFAK Trigger: CTTGGCAAAGTATCTGAAGCAGATATTAGTGGGAAG...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CCA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTATCTCCACATTGCTTTTaGGGTGGTAAAATAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: AFKVNHISSSTLTQISPLSPHCF*GGKIEF Trigger: AAATTCTATTTTACCACCCCAAAAGCAATGTGGAGA...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTGCCGTTATGTTCTTATaGCATCCAGCGAAGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MSYRAQGVSGLGKLSRCAAVMFL*HPAKSR Trigger: CCTGGACTTCGCTGGATGCAATAAGAACATAACGGC...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTCATCTTCATCAAGCTTaGACAACTCCATCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: MSYRAQGVSGLGKLSRCAHLHQA*TTPSSF Trigger: GAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGATG...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS TCA 90 bp | GGGCGTTGGGGTTCGACGGGAACTTCTCATCATATGCATAATTGGTaGGCATCTCTCGGGCTCCATCTTGATCACCATAGAACTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GRWGSTGTSHHMHNW*ASLGLHLDHHRTPA Trigger: TGCTGGAGTTCTATGGTGATCAAGATGGAGCCCGAGAGATGCTCACCAATTATGCATATGATGAGAAGTTCCCGTCGAACCCCAACGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CCA 90 bp | TGCCTTCCAGTCACTCTTCGCCCAAAAGAAGCTGAAGTGAAAAGCTaGCCACCAGTTCCTCCTAGACTTCCACTCTTCTTCAACCCACTC | + |
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Preference number: 5 (lower is better) Translates to: CLPVTLRPKEAEVKS*PPVPPRLPLFFNPL Trigger: GAGTGGGTTGAAGAAGAGTGGAAGTCTAGGAGGAACTGGTGGCCAGCTTTTCACTTCAGCTTCTTTTGGGCGAAGAGTGACTGGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | ATGAGCTACAGAGCCCAGGGTGTCTCTGGCCTTGGGAAGCTGTCCCGCTGTGCTGACTTCTTCATTCGCTaGATTTTCTTCTTCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: MSYRAQGVSGLGKLSRCADFFIR*IFFFKV Trigger: AACCTTGAAGAAGAAAATCAAGCGAATGAAGAAGTC...AGCACAGCGGGACAGCTTCCCAAGGCCAGAGACACCCTGGGCTCTGTAGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS TCA 90 bp | TCAGTGTCTGCCTTCCAGTCACTCTTCGCCCAAAAGAAGCTGAAGTaGAAAGCTGGCCACCAGTTCCTCCTAGACTTCCACTCTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SVSAFQSLFAQKKLK*KAGHQFLLDFHSSS Trigger: TGAAGAAGAGTGGAAGTCTAGGAGGAACTGGTGGCCAGCTTTTCACTTCAGCTTCTTTTGGGCGAAGAGTGACTGGAAGGCAGACACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGCTCTCGGGCTCCATCTaGATCACCATAGAACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SPSEPSWNPSTLTITTRQLSGSI*ITIELQ Trigger: CTGGAGTTCTATGGTGATCAAGATGGAGCCCGAGAG...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS GCA 90 bp | CAACACTTCCTGAGAAGACGACTTTTCTCCATACCTCCACGTCTCTaGCTTACTCAGGTTCCTGTTCGCATCATCAAGCATTCCATGATG | + |
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Preference number: 5 (lower is better) Translates to: QHFLRRRLFSIPPRL*LTQVPVRIIKHSMM Trigger: CATCATGGAATGCTTGATGATGCGAACAGGAACCTGAGTAAGGCAGAGACGTGGAGGTATGGAGAAAAGTCGTCTTCTCAGGAAGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTACATATACTCTGCAGCTaGCTGCCACTGGTGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: AFKVNHISSSTLTQISPLHILCS*LPLVLQ Trigger: CTGAAGCACCAGTGGCAGCAAGCTGCAGAGTATATG...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS TCA 90 bp | TTCAGCAGGGCTTCCTGGATAAAGCTTAAACAAGCACTTGTCGTCTaGGCAAAATCCTTCCTCTTCTTCCCTCCAGTCACTACAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FSRASWIKLKQALVV*AKSFLFFPPVTTAS Trigger: TGAAGCTGTAGTGACTGGAGGGAAGAAGAGGAAGGATTTTGCTCAGACGACAAGTGCTTGTTTAAGCTTTATCCAGGAAGCCCTGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS TCA 90 bp | GGTTCGGGTTTTGGCGGCGTAAGCGTAATCATCTTCATCAAGCTTTaGCAACTCCATCTTCTTTCTGGTCCAAGTGTAGTACTGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GSGFGGVSVIIFIKL*QLHLLSGPSVVLQK Trigger: CTTCTGCAGTACTACACTTGGACCAGAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGATGATTACGCTTACGCCGCCAAAACCCGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | GCCTTTAAGGTCAACCACATCTCTTCTAGCACTCTGACTCAAATCAGTCCTCTAATATTTGTAGACGTCTaGCAGCTCTGGCTGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: AFKVNHISSSTLTQISPLIFVDV*QLWLSM Trigger: CATGCTCAGCCAGAGCTGCAAGACGTCTACAAATAT...TAGAGGACTGATTTGAGTCAGAGTGCTAGAAGAGATGTGGTTGACCTTAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS GCA 90 bp | GCTTCAGATACTTTGCCAAGTATTTCCAGGCCGTTATGTTCTTATTaGATCCAGCGAAGTCCAGGACTTCAAATAACACAGACAAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: ASDTLPSISRPLCSY*IQRSPGLQITQTSP Trigger: TGGGCTTGTCTGTGTTATTTGAAGTCCTGGACTTCGCTGGATGCAATAAGAACATAACGGCCTGGAAATACTTGGCAAAGTATCTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCAGTGAGCCTTCCTGGAATCCAAGTACTTTAACAATAACTACAAGGCAGAGCTTAAACAAGCACTaGTCGTCTGAGCAAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: SPSEPSWNPSTLTITTRQSLNKH*SSEQNP Trigger: AGGATTTTGCTCAGACGACAAGTGCTTGTTTAAGCT...CTGCCTTGTAGTTATTGTTAAAGTACTTGGATTCCAGGAAGGCTCACTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CCA 90 bp | AAGCGTAATCATCTTCATCAAGCTTTGACAACTCCATCTTCTTTCTaGTCCAAGTGTAGTACTGCAGAAGCCCTTTGTAAGCCTGAACAA | + |
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Preference number: 5 (lower is better) Translates to: KRNHLHQALTTPSSF*SKCSTAEALCKPEQ Trigger: TTGTTCAGGCTTACAAAGGGCTTCTGCAGTACTACACTTGGACCAGAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGATGATTACGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS GCA 72 bp | GTCCTCCAGGGTCTGCAGGTAACTGTGCATATACTCTaGAGCTTGCTGCCACTGGTGCTTCAGCAGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLQGLQVTVHIL*SLLPLVLQQGF Trigger: GAAGCCCTGCTGAAGCACCAGTGGCAGCAAGCTGCAGAGTATATGCACAGTTACCTGCAGACCCTGGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CCA 72 bp | GTCACTCTTCGCCCAAAAGAAGCTGAAGTGAAAAGCTaGCCACCAGTTCCTCCTAGACTTCCACTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VTLRPKEAEVKS*PPVPPRLPLFF Trigger: GAAGAAGAGTGGAAGTCTAGGAGGAACTGGTGGCCAGCTTTTCACTTCAGCTTCTTTTGGGCGAAGAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS TCA 72 bp | TTCTTCCCTCCAGTCACTACAGCTTCAACGTGCTTGTaGAGCCATGGGAAATGCATTCCCGTTTTAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: FFPPVTTASTCL*SHGKCIPVLES Trigger: GCTCTCTAAAACGGGAATGCATTTCCCATGGCTTCACAAGCACGTTGAAGCTGTAGTGACTGGAGGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CAA 90 bp | TGGTTCGGGTTTTGGCGGCGTAAGCGTAATCATCTTCATCAAGCTTaGACAACTCCATCTTCTTTCTGGTCCAAGTGTAGTACTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WFGFWRRKRNHLHQA*TTPSSFWSKCSTAE Trigger: TTCTGCAGTACTACACTTGGACCAGAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGATGATTACGCTTACGCCGCCAAAACCCGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CAA 90 bp | TGCTTCAGATACTTTGCCAAGTATTTCCAGGCCGTTATGTTCTTATaGCATCCAGCGAAGTCCAGGACTTCAAATAACACAGACAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: CFRYFAKYFQAVMFL*HPAKSRTSNNTDKP Trigger: GGGCTTGTCTGTGTTATTTGAAGTCCTGGACTTCGCTGGATGCAATAAGAACATAACGGCCTGGAAATACTTGGCAAAGTATCTGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CAA 72 bp | ATATGCATAATTGGTGAGCATCTCTCGGGCTCCATCTaGATCACCATAGAACTCCAGCATCTCCACATAACT | + |
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Preference number: 6 (lower is better) Translates to: ICIIGEHLSGSI*ITIELQHLHIT Trigger: AGTTATGTGGAGATGCTGGAGTTCTATGGTGATCAAGATGGAGCCCGAGAGATGCTCACCAATTATGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CAA 90 bp | CTTCTCATCATATGCATAATTGGTGAGCATCTCTCGGGCTCCATCTaGATCACCATAGAACTCCAGCATCTCCACATAACTCTTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LLIICIIGEHLSGSI*ITIELQHLHITLHK Trigger: TTTGTGAAGAGTTATGTGGAGATGCTGGAGTTCTATGGTGATCAAGATGGAGCCCGAGAGATGCTCACCAATTATGCATATGATGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS GCA 72 bp | ACTTTGCCAAGTATTTCCAGGCCGTTATGTTCTTATTaGATCCAGCGAAGTCCAGGACTTCAAATAACACAG | + |
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Preference number: 6 (lower is better) Translates to: TLPSISRPLCSY*IQRSPGLQITQ Trigger: CTGTGTTATTTGAAGTCCTGGACTTCGCTGGATGCAATAAGAACATAACGGCCTGGAAATACTTGGCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CCA 72 bp | CATCTTCATCAAGCTTTGACAACTCCATCTTCTTTCTaGTCCAAGTGTAGTACTGCAGAAGCCCTTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: HLHQALTTPSSF*SKCSTAEALCK Trigger: CTTACAAAGGGCTTCTGCAGTACTACACTTGGACCAGAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CAA 72 bp | TTTTGGCGGCGTAAGCGTAATCATCTTCATCAAGCTTaGACAACTCCATCTTCTTTCTGGTCCAAGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: FWRRKRNHLHQA*TTPSSFWSKCS Trigger: ACTACACTTGGACCAGAAAGAAGATGGAGTTGTCAAAGCTTGATGAAGATGATTACGCTTACGCCGCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS TCA 72 bp | TTACTCAGGTTCCTGTTCGCATCATCAAGCATTCCATaGTGTAAAAGATACAAGGCGTGTTGTAAGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: LLRFLFASSSIP*CKRYKACCKEI Trigger: GATCTCCTTACAACACGCCTTGTATCTTTTACATCATGGAATGCTTGATGATGCGAACAGGAACCTGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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| CDS CAA 72 bp | TACTTTGCCAAGTATTTCCAGGCCGTTATGTTCTTATaGCATCCAGCGAAGTCCAGGACTTCAAATAACACA | + |
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Preference number: 6 (lower is better) Translates to: YFAKYFQAVMFL*HPAKSRTSNNT Trigger: TGTGTTATTTGAAGTCCTGGACTTCGCTGGATGCAATAAGAACATAACGGCCTGGAAATACTTGGCAAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192076.3 |
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