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Pregenerated sensors for TAF15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020680

Ensembl transcript IDs: ENSMUST00000021018.11, ENSMUST00000133170.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TCTTCCATCCTTGTCATATCCCCCACGCCCTCTACCTCCTCCCTGTaGCCCGCCATATCCTCTATTATCTTCTCCATACCTACTCACATC +
Preference number: 5 (lower is better)
Translates to: SSILVISPTPSTSSL*PAISSIIFSIPTHI
Trigger: GATGTGAGTAGGTATGGAGAAGATAATAGAGGATATGGCGGGTCACAGGGAGGAGGTAGAGGGCGTGGGGGATATGACAAGGATGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS TCA 90 bp TCTCCCCCTGAGGGACGTGAGTCCTCTGGTCTAGGCTCATTGCACTaGTTACAGGAGTTTCTTCGAGCAAAGTTCATATTTCCACATGAC +
Preference number: 5 (lower is better)
Translates to: SPPEGRESSGLGSLH*LQEFLRAKFIFPHD
Trigger: GTCATGTGGAAATATGAACTTTGCTCGAAGAAACTCCTGTAATCAGTGCAATGAGCCTAGACCAGAGGACTCACGTCCCTCAGGGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021018.11
ENSMUST00000133170.2
CDS GCA 90 bp GCCCATAGCCAGAATAACCTTGTGGTGTTTGTCCATAGCCTTGACTaGCTTGATTTCCATAAGAAGAATAACTTTGCTGCTCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: AHSQNNLVVFVHSLD*LDFHKKNNFAAHPQ
Trigger: CTGGGGGTGAGCAGCAAAGTTATTCTTCTTATGGAAATCAAGGCAGTCAAGGCTATGGACAAACACCACAAGGTTATTCTGGCTATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS TCA 90 bp ATCACGACGGTCATCTTGTGTGTGGTGGCTGTAGTTTTCCCTTTGTaGATGGTAAGACTGTTGGTTTTGATTATAGGAATCATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: ITTVILCVVAVVFPL*MVRLLVLIIGIMLL
Trigger: CAGCAACATGATTCCTATAATCAAAACCAACAGTCTTACCATTCACAAAGGGAAAACTACAGCCACCACACACAAGATGACCGTCGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 90 bp CCGCGGTCACCACCACTTGATCCTGTCATAGGACCTCTTCCATCCTaGTCATATCCCCCACGCCCTCTACCTCCTCCCTGTGACCCGCCA +
Preference number: 6 (lower is better)
Translates to: PRSPPLDPVIGPLPS*SYPPRPLPPPCDPP
Trigger: TGGCGGGTCACAGGGAGGAGGTAGAGGGCGTGGGGGATATGACAAGGATGGAAGAGGTCCTATGACAGGATCAAGTGGTGGTGACCGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS TCA 72 bp GTCTGGGTCCATAATCCCTGTGACCACCAAAATTTTTaGAGCCACCGCGGTCACCACCACTTGATCCTGTCA +
Preference number: 6 (lower is better)
Translates to: VWVHNPCDHQNF*SHRGHHHLILS
Trigger: TGACAGGATCAAGTGGTGGTGACCGCGGTGGCTTCAAAAATTTTGGTGGTCACAGGGATTATGGACCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021018.11
ENSMUST00000133170.2
CDS CAA 90 bp ACCGGAGTAACCACCATAGTTTTGTCCATACGAAGAATCAGTCGTTaGCCCATAGCCAGAATAACCTTGTGGTGTTTGTCCATAGCCTTG +
Preference number: 6 (lower is better)
Translates to: TGVTTIVLSIRRISR*PIARITLWCLSIAL
Trigger: CAAGGCTATGGACAAACACCACAAGGTTATTCTGGCTATGGGCAAACGACTGATTCTTCGTATGGACAAAACTATGGTGGTTACTCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 72 bp GCCTTGACTGCCTTGATTTCCATAAGAAGAATAACTTaGCTGCTCACCCCCAGACTGACTGTAACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: ALTALISIRRIT*LLTPRLTVTSR
Trigger: TCTGGAAGTTACAGTCAGTCTGGGGGTGAGCAGCAAAGTTATTCTTCTTATGGAAATCAAGGCAGTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 90 bp CGTTTGCCCATAGCCAGAATAACCTTGTGGTGTTTGTCCATAGCCTaGACTGCCTTGATTTCCATAAGAAGAATAACTTTGCTGCTCACC +
Preference number: 6 (lower is better)
Translates to: RLPIARITLWCLSIA*TALISIRRITLLLT
Trigger: GGTGAGCAGCAAAGTTATTCTTCTTATGGAAATCAAGGCAGTCAAGGCTATGGACAAACACCACAAGGTTATTCTGGCTATGGGCAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 72 bp AGTCGTTTGCCCATAGCCAGAATAACCTTGTGGTGTTaGTCCATAGCCTTGACTGCCTTGATTTCCATAAGA +
Preference number: 6 (lower is better)
Translates to: SRLPIARITLWC*SIALTALISIR
Trigger: TCTTATGGAAATCAAGGCAGTCAAGGCTATGGACAAACACCACAAGGTTATTCTGGCTATGGGCAAACGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 72 bp ACCACCATAGTTTTGTCCATACGAAGAATCAGTCGTTaGCCCATAGCCAGAATAACCTTGTGGTGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: TTIVLSIRRISR*PIARITLWCLS
Trigger: GGACAAACACCACAAGGTTATTCTGGCTATGGGCAAACGACTGATTCTTCGTATGGACAAAACTATGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 72 bp TTGATTTTGTCCATAACCGGAGTAACCACCATAGTTTaGTCCATACGAAGAATCAGTCGTTTGCCCATAGCC +
Preference number: 6 (lower is better)
Translates to: LILSITGVTTIV*SIRRISRLPIA
Trigger: GGCTATGGGCAAACGACTGATTCTTCGTATGGACAAAACTATGGTGGTTACTCCGGTTATGGACAAAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 72 bp ATAACCTTGTGGTGTTTGTCCATAGCCTTGACTGCCTaGATTTCCATAAGAAGAATAACTTTGCTGCTCACC +
Preference number: 6 (lower is better)
Translates to: ITLWCLSIALTA*ISIRRITLLLT
Trigger: GGTGAGCAGCAAAGTTATTCTTCTTATGGAAATCAAGGCAGTCAAGGCTATGGACAAACACCACAAGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS TCA 72 bp GTCATCTTGTGTGTGGTGGCTGTAGTTTTCCCTTTGTaGATGGTAAGACTGTTGGTTTTGATTATAGGAATC +
Preference number: 6 (lower is better)
Translates to: VILCVVAVVFPL*MVRLLVLIIGI
Trigger: GATTCCTATAATCAAAACCAACAGTCTTACCATTCACAAAGGGAAAACTACAGCCACCACACACAAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11
CDS CAA 72 bp ATAGCCAGAATAACCTTGTGGTGTTTGTCCATAGCCTaGACTGCCTTGATTTCCATAAGAAGAATAACTTTG +
Preference number: 6 (lower is better)
Translates to: IARITLWCLSIA*TALISIRRITL
Trigger: CAAAGTTATTCTTCTTATGGAAATCAAGGCAGTCAAGGCTATGGACAAACACCACAAGGTTATTCTGGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021018.11