Pregenerated sensors for TAF12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028899Ensembl transcript IDs: ENSMUST00000030731.11, ENSMUST00000105963.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCAGCCTCCCCCAAACAGCAGAGATGGAGTTCTCTCTTTGGCTaGCCTTCCAGCACTGCCCAGGACCACATGTGGCTGGAGTGGACT | + |
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Preference number: 1 (lower is better) Translates to: VAASPKQQRWSSLFG*PSSTAQDHMWLEWT Trigger: AGTCCACTCCAGCCACATGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACTCCATCTCTGCTGTTTGGGGGAGGCTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | CCTGCCGGTTTCTCTAACAGGATCACTGCCTGTACTGCCACCTGCTaGCTGCAGCGCTCCCAGCCTTGCTGGGACCCTGGCATTTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: PAGFSNRITACTATC*LQRSQPCWDPGISK Trigger: CTTTGAAATGCCAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACAGGCAGTGATCCTGTTAGAGAAACCGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR GCA 90 bp | CCGGTTTCTCTAACAGGATCACTGCCTGTACTGCCACCTGCTGACTaGAGCGCTCCCAGCCTTGCTGGGACCCTGGCATTTCAAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: PVSLTGSLPVLPPAD*SAPSLAGTLAFQRL Trigger: GAGCCTTTGAAATGCCAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACAGGCAGTGATCCTGTTAGAGAAACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR GCA 90 bp | CCACCCTCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTTGTaGTGGGCGTGGGTCAGGATGATGACAGGGAAGAACATCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: PPSPKPMVPHNPQGL*WAWVRMMTGKNILL Trigger: CAGCAGGATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGAGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | TTTGGCTGGCCTTCCAGCACTGCCCAGGACCACATGTGGCTGGAGTaGACTAGCAGGCAGCTTGTGAGGAGGCAGGCTAGAATCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: FGWPSSTAQDHMWLE*TSRQLVRRQARILS Trigger: ACTGAGGATTCTAGCCTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | AGTTCTCTCTTTGGCTGGCCTTCCAGCACTGCCCAGGACCACATGTaGCTGGAGTGGACTAGCAGGCAGCTTGTGAGGAGGCAGGCTAGA | + |
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Preference number: 1 (lower is better) Translates to: SSLFGWPSSTAQDHM*LEWTSRQLVRRQAR Trigger: TCTAGCCTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | CCCTCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTTGTGCTaGGCGTGGGTCAGGATGATGACAGGGAAGAACATCCTGCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: PSPKPMVPHNPQGLC*AWVRMMTGKNILLL Trigger: CAACAGCAGGATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | CTCAGTGTCAGGCGTGACCAGGGAAGAAGCTGGTTGTCCCCTTGCTaGCTCTCCAGGCTGAAACCTCAGCCAAGAAAACGGCAACAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LSVRRDQGRSWLSPC*LSRLKPQPRKRQQK Trigger: CTTCTGTTGCCGTTTTCTTGGCTGAGGTTTCAGCCTGGAGAGTCAGCAAGGGGACAACCAGCTTCTTCCCTGGTCACGCCTGACACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | TACTGCCACCTGCTGACTGCAGCGCTCCCAGCCTTGCTGGGACCCTaGCATTTCAAAGGCTCTCAGCTATGCACCCTGTGTCTTCAATTA | + |
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Preference number: 1 (lower is better) Translates to: YCHLLTAALPALLGP*HFKGSQLCTLCLQL Trigger: TAATTGAAGACACAGGGTGCATAGCTGAGAGCCTTTGAAATGCCAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | CCTAAGCCCATGGTCCCTCACAATCCACAAGGCTTGTGCTGGGCGTaGGTCAGGATGATGACAGGGAAGAACATCCTGCTGTTGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: PKPMVPHNPQGLCWA*VRMMTGKNILLLRE Trigger: CTCTCTCAACAGCAGGATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | CCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGTAGGTTCTaGAGAGTTAAGGCCCTCCTGACGCTAGGCCACATACCCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: PTEHPLRTSSSGCRF*RVKALLTLGHIPRS Trigger: GCTTCTGGGTATGTGGCCTAGCGTCAGGAGGGCCTTAACTCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | GTGACCAGGGAAGAAGCTGGTTGTCCCCTTGCTGACTCTCCAGGCTaGAACCTCAGCCAAGAAAACGGCAACAGAAGCATGGCCTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: VTREEAGCPLADSPG*NLSQENGNRSMAFE Trigger: TTCAAAGGCCATGCTTCTGTTGCCGTTTTCTTGGCTGAGGTTTCAGCCTGGAGAGTCAGCAAGGGGACAACCAGCTTCTTCCCTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR GCA 90 bp | CTGGCATCAGTTACTTGTTCCTATCCGGACTCAGTGGGACCCCTCTaGTGTCTGGTGTCACCAACAGAGCATCCTCTGAGAACATCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LASVTCSYPDSVGPL*CLVSPTEHPLRTSS Trigger: GGAAGATGTTCTCAGAGGATGCTCTGTTGGTGACACCAGACAGCAGAGGGGTCCCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | AGGCTGAAACCTCAGCCAAGAAAACGGCAACAGAAGCATGGCCTTTaGACTCCTCAGATCTATGAACTGTGTCACGTCTCCGACCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: RLKPQPRKRQQKHGL*TPQIYELCHVSDQA Trigger: GGCTTGGTCGGAGACGTGACACAGTTCATAGATCTGAGGAGTTCAAAGGCCATGCTTCTGTTGCCGTTTTCTTGGCTGAGGTTTCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | GTGCTCCAACTCCTACTGCTGGCTTGTTCCTTTGGAGTAAAACAGTaGGAGATCCCTGCCGGTTTCTCTAACAGGATCACTGCCTGTACT | + |
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Preference number: 1 (lower is better) Translates to: VLQLLLLACSFGVKQ*EIPAGFSNRITACT Trigger: AGTACAGGCAGTGATCCTGTTAGAGAAACCGGCAGGGATCTCCCACTGTTTTACTCCAAAGGAACAAGCCAGCAGTAGGAGTTGGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | AAGAAAACGGCAACAGAAGCATGGCCTTTGAACTCCTCAGATCTATaGACTGTGTCACGTCTCCGACCAAGCCTCAGGAGGAAGATGACC | + |
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Preference number: 1 (lower is better) Translates to: KKTATEAWPLNSSDL*TVSRLRPSLRRKMT Trigger: GGTCATCTTCCTCCTGAGGCTTGGTCGGAGACGTGACACAGTTCATAGATCTGAGGAGTTCAAAGGCCATGCTTCTGTTGCCGTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | CTCAAAAGAGGACTCAAGAGTCATTCCAGATTCCATCTTGGCTGCTaGCATCAGTTACTTGTTCCTATCCGGACTCAGTGGGACCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LKRGLKSHSRFHLGC*HQLLVPIRTQWDPS Trigger: AGAGGGGTCCCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAATGACTCTTGAGTCCTCTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | AGGACTTCCCCCAGAGCTATTCACATCCTTCCTCAGGGACAAGGATaGATACAATCTTCTATGGAGATCCAGAGAGGTCTAAAGGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: RTSPRAIHILPQGQG*IQSSMEIQRGLKGL Trigger: GAGCCCCTTTAGACCTCTCTGGATCTCCATAGAAGATTGTATTCATCCTTGTCCCTGAGGAAGGATGTGAATAGCTCTGGGGGAAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | GAATGCTTGTTTATTTTGGGGCTTAGCAGAGGTCACTGTGTCTGGTaGCAGAGAAAGTGCTCCAACTCCTACTGCTGGCTTGTTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: ECLFILGLSRGHCVW*QRKCSNSYCWLVPL Trigger: CAAAGGAACAAGCCAGCAGTAGGAGTTGGAGCACTTTCTCTGCCACCAGACACAGTGACCTCTGCTAAGCCCCAAAATAAACAAGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CCA 90 bp | TTCGGTCCTCAAAAGAGGACTCAAGAGTCATTCCAGATTCCATCTTaGCTGCTGGCATCAGTTACTTGTTCCTATCCGGACTCAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: FGPQKRTQESFQIPS*LLASVTCSYPDSVG Trigger: TCCCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAATGACTCTTGAGTCCTCTTTTGAGGACCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | AGGACTGTCCACCCCTTTCTTCCTTTTATTATGGCTTCTGCCTACTaGAGGAATGGGCACAGCTTACAGAGACATGAACAGTCCTTCGGT | + |
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Preference number: 1 (lower is better) Translates to: RTVHPFLPFIMASAY*RNGHSLQRHEQSFG Trigger: ACCGAAGGACTGTTCATGTCTCTGTAAGCTGTGCCCATTCCTTCAGTAGGCAGAAGCCATAATAAAAGGAAGAAAGGGGTGGACAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR GCA 90 bp | AACAAGGCTGGTGATGTGCTAGTCAGTATTCAGCCTGCTATTCCTTaGAGTGTATTCAATAAATCTGTTTACCTCAAGACAACGGCAACT | + |
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Preference number: 1 (lower is better) Translates to: NKAGDVLVSIQPAIP*SVFNKSVYLKTTAT Trigger: AGTTGCCGTTGTCTTGAGGTAAACAGATTTATTGAATACACTGCAAGGAATAGCAGGCTGAATACTGACTAGCACATCACCAGCCTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR TCA 90 bp | AGACACATAACAAAGTCAACATCAAAAGAACTGAAACAAGGCTGGTaGTGTGCTAGTCAGTATTCAGCCTGCTATTCCTTGCAGTGTATT | + |
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Preference number: 1 (lower is better) Translates to: RHITKSTSKELKQGW*CASQYSACYSLQCI Trigger: AATACACTGCAAGGAATAGCAGGCTGAATACTGACTAGCACATCACCAGCCTTGTTTCAGTTCTTTTGATGTTGACTTTGTTATGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGACCACATGTGGCTGGAGTGGACTAGCAGGCAGCTTGTGAGGAGGCAGGGTGTGGCTGTGCTGTaGCCCCTAGGAGGAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: AQDHMWLEWTSRQLVRRQGVAVL*PLGGAA Trigger: GGCTGCTCCTCCTAGGGGCCACAGCACAGCCACACC...CTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGTCCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGACCACATGTGGCTGGAGTGGACTAGCAGGCAGCTTGTGAGGAGGCAGTGTACTGCCACCTGCTaGCTGCAGCGCTCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: AQDHMWLEWTSRQLVRRQCTATC*LQRSQP Trigger: AGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACA...CTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGTCCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CAA 90 bp | GATCACTGCCTGTACTGCCACCTGCTGACTGCAGCGCTCCCAGCCTaGCTGGGACCCTGGCATTTCAAAGGCTCTCAGCTATGCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: DHCLYCHLLTAALPA*LGPWHFKGSQLCTL Trigger: CAGGGTGCATAGCTGAGAGCCTTTGAAATGCCAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACAGGCAGTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTGTACTGCCACCTGCTGACTGCAGCGCTCCCAGCCTTGCTGGGACCCTGTACACTGCTTCTCTTTaGGACGGCAGGGAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LPVLPPADCSAPSLAGTLYTASL*DGREKG Trigger: TCCCTTTTCCCTGCCGTCTCAAAGAGAAGCAGTGTA...CAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGATGGAGTTCTCTCTTTGGCTGGCCTTCCAGCACTGCCCAGGACCACACTGCCACCTGCTGACTaGAGCGCTCCCAGCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: SRDGVLSLAGLPALPRTTLPPAD*SAPSLA Trigger: AGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAG...TGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACTCCATCTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGACCACATGTGGCTGGAGTGGACTAGCAGGCAGCTTGTGAGGAGGCAGGGTCATCCCAGCACTTaGGTGTGGAGACAGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: AQDHMWLEWTSRQLVRRQGHPST*VWRQLD Trigger: ATCCAGCTGTCTCCACACCCAAGTGCTGGGATGACC...CTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGTCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CAA 90 bp | CAGCCACCCTCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTaGTGCTGGGCGTGGGTCAGGATGATGACAGGGAAGAACATCCTG | + |
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Preference number: 2 (lower is better) Translates to: QPPSPKPMVPHNPQG*CWAWVRMMTGKNIL Trigger: CAGGATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGAGGGTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCTGGTTGTCCCCTTGCTaGCTCTCCAGGCTGAAACCT | + |
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Preference number: 2 (lower is better) Translates to: QTAASLRSPTPALVAASPWLSPC*LSRLKP Trigger: AGGTTTCAGCCTGGAGAGTCAGCAAGGGGACAACCA...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGATGGAGTTCTCTCTTTGGCTGGCCTTCCAGCACTGCCCAGGACCACACCTATCCGGACTCAGTaGGACCCCTCTGCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRDGVLSLAGLPALPRTTPIRTQ*DPSAVW Trigger: CCAGACAGCAGAGGGGTCCCACTGAGTCCGGATAGG...TGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACTCCATCTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCAAGACATGGCTCAGCTaGGTAGTGGTGGCACACACC | + |
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Preference number: 2 (lower is better) Translates to: QTAASLRSPTPALVAASPKTWLS*VVVAHT Trigger: GGTGTGTGCCACCACTACCCAGCTGAGCCATGTCTT...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCGTGGTCTCAGCTCACTaGGAGGGTCAGTTCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: QTAASLRSPTPALVAASPVVSAH*EGQFKD Trigger: ATCCTTGAACTGACCCTCTCAGTGAGCTGAGACCAC...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCGCAACAGTTAAGACATaGCTCAGCTGGGTAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QTAASLRSPTPALVAASPATVKT*LSWVVV Trigger: CACCACTACCCAGCTGAGCCATGTCTTAACTGTTGC...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CAA 90 bp | TGCTGGGCGTGGGTCAGGATGATGACAGGGAAGAACATCCTGCTGTaGAGAGAGGCCCTGCTTTCCTCCGATGACAGAATCCCAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: CWAWVRMMTGKNILL*REALLSSDDRIPAT Trigger: TGTTGCTGGGATTCTGTCATCGGAGGAAAGCAGGGCCTCTCTCAACAGCAGGATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCCACCCTCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTTGTGCAAAGGGACCAGAAGGTaGGCAGGAGGCTTTATTCTT | + |
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Preference number: 2 (lower is better) Translates to: EQPPSPKPMVPHNPQGLCKGTRR*AGGFIL Trigger: AAGAATAAAGCCTCCTGCCCACCTTCTGGTCCCTTT...GCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGAGGGTGGCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGATGGAGTTCTCTCTTTGGCTGGCCTTCCAGCACTGCCCAGGACCACAAGAGGTCACTGTGTCTaGTGGCAGAGAAAGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SRDGVLSLAGLPALPRTTRGHCV*WQRKCS Trigger: GGAGCACTTTCTCTGCCACCAGACACAGTGACCTCT...TGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACTCCATCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR GCA 90 bp | CAATCCACAAGGCTTGTGCTGGGCGTGGGTCAGGATGATGACAGGGAAGAACATGCCTACCCCAGAGCTTaGCTCAAAACACACACACCC | + |
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Preference number: 2 (lower is better) Translates to: QSTRLVLGVGQDDDREEHAYPRA*LKTHTP Trigger: GGGTGTGTGTGTTTTGAGGCAAGCTCTGGGGTAGGC...ATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGTCTGGTGTCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGAATCCACAAGGCTTGTaGTGGGCGTGGGTCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LLSGVTNRASSENIFQWLNPQGL*WAWVRM Trigger: CATCCTGACCCACGCCCAGCACAAGCCTTGTGGATT...CAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGACACCAGACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTACTGAAGGAATGGGCACAGCTTACAGAGACATGAACAGTCCTTCGGTGCCACAAGGCTTGTGCTaGGCGTGGGTCAGGATGATG | + |
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Preference number: 2 (lower is better) Translates to: LPTEGMGTAYRDMNSPSVPQGLC*AWVRMM Trigger: CATCATCCTGACCCACGCCCAGCACAAGCCTTGTGG...CACCGAAGGACTGTTCATGTCTCTGTAAGCTGTGCCCATTCCTTCAGTAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGACCACATGTGGCTGGAGTGGACTAGCAGGCAGCTTGTGAGGAGGCAGTACACAGAGAAACCCTaGCTTGAAAAACCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: AQDHMWLEWTSRQLVRRQYTEKP*LEKPKT Trigger: TGTCTTTGGTTTTTCAAGGCAGGGTTTCTCTGTGTA...CTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGTCCTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR CAA 90 bp | TCAAGAGTCATTCCAGATTCCATCTTGGCTGCTGGCATCAGTTACTaGTTCCTATCCGGACTCAGTGGGACCCCTCTGCTGTCTGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SRVIPDSILAAGISY*FLSGLSGTPLLSGV Trigger: GACACCAGACAGCAGAGGGGTCCCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAATGACTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCAATGCTTGTTTATTTTaGGGCTTAGCAGAGGTCACT | + |
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Preference number: 2 (lower is better) Translates to: QTAASLRSPTPALVAASPNACLF*GLAEVT Trigger: AGTGACCTCTGCTAAGCCCCAAAATAAACAAGCATT...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTACTGAAGGAATGGGCACAGCTTACAGAGACATGAACAGTCCTTCGGTGGATGATGCACACCTGTaGTCTCAGCTCACTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPTEGMGTAYRDMNSPSVDDAHL*SQLTER Trigger: CCTCTCAGTGAGCTGAGACCACAGGTGTGCATCATC...CACCGAAGGACTGTTCATGTCTCTGTAAGCTGTGCCCATTCCTTCAGTAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR TCA 90 bp | TCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGTAGGTTCTGGAGAAAGATACCAAGAGTTTaGAGCCAGCCTGGCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: SPTEHPLRTSSSGCRFWRKIPRV*SQPGLP Trigger: GGGTAGGCCAGGCTGGCTTCAAACTCTTGGTATCTT...TCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
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| 3UTR-3UTR TCA 90 bp | AATTCCCCTGTCCCTTTCGGTCCTCAAAAGAGGACTCAAGAGTCATTCCAGATTGCCTCAGGAGGAAGATaGCCAGAGCAGGGACCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NSPVPFGPQKRTQESFQIASGGR*PEQGPK Trigger: CTTTGGTCCCTGCTCTGGTCATCTTCCTCCTGAGGC...AATCTGGAATGACTCTTGAGTCCTCTTTTGAGGACCGAAAGGGACAGGGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTGTCTGGTGTCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGAACTCCTCAGATCTATaGACTGTGTCACGTCTCCGA | + |
|
Preference number: 2 (lower is better) Translates to: LLSGVTNRASSENIFQWLNSSDL*TVSRLR Trigger: TCGGAGACGTGACACAGTTCATAGATCTGAGGAGTT...CAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGACACCAGACAGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR TCA 90 bp | CAATCCACAAGGCTTGTGCTGGGCGTGGGTCAGGATGATGACAGGGAAGAACATCCTCAGGGACAAGGATaGATACAATCTTCTATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QSTRLVLGVGQDDDREEHPQGQG*IQSSME Trigger: CTCCATAGAAGATTGTATTCATCCTTGTCCCTGAGG...ATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR TCA 90 bp | TTTACCTCAAGACAACGGCAACTAAACAATCAAGATGGTAACTGGGGCTTGGGAGCTCAGTGTCAGGCGTaGCCAGGGAAGAAGCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FTSRQRQLNNQDGNWGLGAQCQA*PGKKLV Trigger: AACCAGCTTCTTCCCTGGTCACGCCTGACACTGAGC...TCCCAAGCCCCAGTTACCATCTTGATTGTTTAGTTGCCGTTGTCTTGAGGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGAGATGGAGTTCTCTCTTTGGCTGGCCTTCCAGCACTGCCCAGGACCACAAGTCAGTATTCAGCCTaGTATTCCTTGCAGTGTATT | + |
|
Preference number: 2 (lower is better) Translates to: SRDGVLSLAGLPALPRTTSQYSA*YSLQCI Trigger: AATACACTGCAAGGAATAGCAGGCTGAATACTGACT...TGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACTCCATCTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTGTCTGGTGTCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGGCTGGCTTGTTCCTTTaGAGTAAAACAGTGGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLSGVTNRASSENIFQWLAGLFL*SKTVGD Trigger: ATCTCCCACTGTTTTACTCCAAAGGAACAAGCCAGC...CAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGACACCAGACAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 90 bp | CAGAGAAACCCTGCCTTGAAAAACCAAAGACACTGTTCAAGTGAATaGGGTGGGAAGCCAAGAACAGCCTGCTGCCAACATAGCTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: QRNPALKNQRHCSSE*GGKPRTACCQHSSP Trigger: TGGTGAGCTATGTTGGCAGCAGGCTGTTCTTGGCTTCCCACCCAATTCACTTGAACAGTGTCTTTGGTTTTTCAAGGCAGGGTTTCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR GCA 90 bp | AATTCCCCTGTCCCTTTCGGTCCTCAAAAGAGGACTCAAGAGTCATTCCAGATTTGGTGGCAGAGAAAGTaGTCCAACTCCTACTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NSPVPFGPQKRTQESFQIWWQRK*SNSYCW Trigger: CCAGCAGTAGGAGTTGGAGCACTTTCTCTGCCACCA...AATCTGGAATGACTCTTGAGTCCTCTTTTGAGGACCGAAAGGGACAGGGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CCA 90 bp | TCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGTAGGTTCTGGAGATTTGGAGTAAAACAGTaGGAGATCCCTGCCGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SPTEHPLRTSSSGCRFWRFGVKQ*EIPAGF Trigger: GAAACCGGCAGGGATCTCCCACTGTTTTACTCCAAA...TCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR TCA 90 bp | TTTACCTCAAGACAACGGCAACTAAACAATCAAGATGGTAACTGGGGCTTGGGAGCTGACTCTCCAGGCTaGAACCTCAGCCAAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FTSRQRQLNNQDGNWGLGADSPG*NLSQEN Trigger: GTTTTCTTGGCTGAGGTTTCAGCCTGGAGAGTCAGC...TCCCAAGCCCCAGTTACCATCTTGATTGTTTAGTTGCCGTTGTCTTGAGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTACCTCAAGACAACGGCAACTAAACAATCAAGATGGTAACTGGGGCTTGGGAGGTCACTGTGTCTGGTaGCAGAGAAAGTGCTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: FTSRQRQLNNQDGNWGLGGHCVW*QRKCSN Trigger: GTTGGAGCACTTTCTCTGCCACCAGACACAGTGACC...TCCCAAGCCCCAGTTACCATCTTGATTGTTTAGTTGCCGTTGTCTTGAGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR GCA 90 bp | TTTACCTCAAGACAACGGCAACTAAACAATCAAGATGGTAACTGGGGCTTGGGACCAACACGACCAAAATaGTCTTCCTACAGCCAATCA | + |
|
Preference number: 2 (lower is better) Translates to: FTSRQRQLNNQDGNWGLGPTRPK*SSYSQS Trigger: TGATTGGCTGTAGGAAGAGCATTTTGGTCGTGTTGG...TCCCAAGCCCCAGTTACCATCTTGATTGTTTAGTTGCCGTTGTCTTGAGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CCA 90 bp | CACACACACAAAAAGGTCCTATGGACACTAACATTATCAAAACTAGAATGCTTGGCCTTGCTGGGACCCTaGCATTTCAAAGGCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HTHKKVLWTLTLSKLECLALLGP*HFKGSQ Trigger: CTGAGAGCCTTTGAAATGCCAGGGTCCCAGCAAGGC...CAAGCATTCTAGTTTTGATAATGTTAGTGTCCATAGGACCTTTTTGTGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 90 bp | GTCCTATGGACACTAACATTATCAAAACTAGAATGCTTGTTTATTTaGGGGCTTAGCAGAGGTCACTGTGTCTGGTGGCAGAGAAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VLWTLTLSKLECLFI*GLSRGHCVWWQRKC Trigger: GCACTTTCTCTGCCACCAGACACAGTGACCTCTGCTAAGCCCCAAAATAAACAAGCATTCTAGTTTTGATAATGTTAGTGTCCATAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGCCACCCTCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTTGTGCGGCCTACCCCAGAGCTaGCCTCAAAACACACACACC | + |
|
Preference number: 3 (lower is better) Translates to: EQPPSPKPMVPHNPQGLCGLPQS*PQNTHT Trigger: GGTGTGTGTGTTTTGAGGCAAGCTCTGGGGTAGGCC...GCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGAGGGTGGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | CTAACAGGATCACTGCCTGTACTGCCACCTGCTGACTaGAGCGCTCCCAGCCTTGCTGGGACCCTGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LTGSLPVLPPAD*SAPSLAGTLAF Trigger: AAATGCCAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACAGGCAGTGATCCTGTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | CTGCTGACTGCAGCGCTCCCAGCCTTGCTGGGACCCTaGCATTTCAAAGGCTCTCAGCTATGCACCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTAALPALLGP*HFKGSQLCTLC Trigger: ACACAGGGTGCATAGCTGAGAGCCTTTGAAATGCCAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | CTGTGTCACGTCTCCGACCAAGCCTCAGGAGGAAGATaGCCAGAGCAGGGACCAAAGGTAGGTGTGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LCHVSDQASGGR*PEQGPKVGVAV Trigger: CACAGCCACACCTACCTTTGGTCCCTGCTCTGGTCATCTTCCTCCTGAGGCTTGGTCGGAGACGTGACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | ACCACATGTGGCTGGAGTGGACTAGCAGGCAGCTTGTaGGGAGGCAGGCTAGAATCCTCAGTGAGGGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TTCGWSGLAGSL*GGRLESSVRVH Trigger: GTGGACCCTCACTGAGGATTCTAGCCTGCCTCCTCACAAGCTGCCTGCTAGTCCACTCCAGCCACATGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | TCACTCACAGCTGCTCTGAGTGGGATGGTGACAGCCTaGAAGGTTGGCAGTACACAGCGGTCATCCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLTAALSGMVTA*KVGSTQRSSQH Trigger: GTGCTGGGATGACCGCTGTGTACTGCCAACCTTGCAGGCTGTCACCATCCCACTCAGAGCAGCTGTGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | TCCCCCAAACAGCAGAGATGGAGTTCTCTCTTTGGCTaGCCTTCCAGCACTGCCCAGGACCACATGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPKQQRWSSLFG*PSSTAQDHMWL Trigger: CAGCCACATGTGGTCCTGGGCAGTGCTGGAAGGCCAGCCAAAGAGAGAACTCCATCTCTGCTGTTTGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | AGGCGTGACCAGGGAAGAAGCTGGTTGTCCCCTTGCTaGCTCTCCAGGCTGAAACCTCAGCCAAGAAAACGG | + |
|
Preference number: 3 (lower is better) Translates to: RRDQGRSWLSPC*LSRLKPQPRKR Trigger: CCGTTTTCTTGGCTGAGGTTTCAGCCTGGAGAGTCAGCAAGGGGACAACCAGCTTCTTCCCTGGTCACGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | ATGGTCCCTCACAATCCACAAGGCTTGTGCTGGGCGTaGGTCAGGATGATGACAGGGAAGAACATCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MVPHNPQGLCWA*VRMMTGKNILL Trigger: CAGCAGGATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | AAGCCCATGGTCCCTCACAATCCACAAGGCTTGTGCTaGGCGTGGGTCAGGATGATGACAGGGAAGAACATC | + |
|
Preference number: 3 (lower is better) Translates to: KPMVPHNPQGLC*AWVRMMTGKNI Trigger: GATGTTCTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | TGCTGGCATCAGTTACTTGTTCCTATCCGGACTCAGTaGGACCCCTCTGCTGTCTGGTGTCACCAACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CWHQLLVPIRTQ*DPSAVWCHQQS Trigger: GCTCTGTTGGTGACACCAGACAGCAGAGGGGTCCCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | CCCTCTGCTGTCTGGTGTCACCAACAGAGCATCCTCTaGGAACATCTTCCAGTGGCTGTAGGTTCTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSAVWCHQQSIL*EHLPVAVGSGE Trigger: CTCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGACACCAGACAGCAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | GCAACAGAAGCATGGCCTTTGAACTCCTCAGATCTATaGACTGTGTCACGTCTCCGACCAAGCCTCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ATEAWPLNSSDL*TVSRLRPSLRR Trigger: CCTCCTGAGGCTTGGTCGGAGACGTGACACAGTTCATAGATCTGAGGAGTTCAAAGGCCATGCTTCTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | GAAGAAGCTGGTTGTCCCCTTGCTGACTCTCCAGGCTaGAACCTCAGCCAAGAAAACGGCAACAGAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: EEAGCPLADSPG*NLSQENGNRSM Trigger: CATGCTTCTGTTGCCGTTTTCTTGGCTGAGGTTTCAGCCTGGAGAGTCAGCAAGGGGACAACCAGCTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | ACCAAACCAAGGGCTCCAATGCCTGAGATGTCAGAATaGAGCCACACACTGAATCTGAGGACTGTCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TKPRAPMPEMSE*SHTLNLRTVHP Trigger: GGGGTGGACAGTCCTCAGATTCAGTGTGTGGCTTCATTCTGACATCTCAGGCATTGGAGCCCTTGGTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | CTTAGCAGAGGTCACTGTGTCTGGTGGCAGAGAAAGTaGTCCAACTCCTACTGCTGGCTTGTTCCTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSRGHCVWWQRK*SNSYCWLVPLE Trigger: CTCCAAAGGAACAAGCCAGCAGTAGGAGTTGGAGCACTTTCTCTGCCACCAGACACAGTGACCTCTGCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | TCAAGTGAATTGGGTGGGAAGCCAAGAACAGCCTGCTaGCAACATAGCTCACCAAACCAAGGGCTCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: SSELGGKPRTAC*QHSSPNQGLQC Trigger: GCATTGGAGCCCTTGGTTTGGTGAGCTATGTTGGCAGCAGGCTGTTCTTGGCTTCCCACCCAATTCACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | CATCCTCTGAGAACATCTTCCAGTGGCTGTAGGTTCTaGAGAGTTAAGGCCCTCCTGACGCTAGGCCACATA | + |
|
Preference number: 3 (lower is better) Translates to: HPLRTSSSGCRF*RVKALLTLGHI Trigger: TATGTGGCCTAGCGTCAGGAGGGCCTTAACTCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | GCAAGGTTGGCAGTACACAGCGGTCATCCCAGCACTTaGGTGTGGAGACAGCTGGATCTTAGACACATAACA | + |
|
Preference number: 3 (lower is better) Translates to: ARLAVHSGHPST*VWRQLDLRHIT Trigger: TGTTATGTGTCTAAGATCCAGCTGTCTCCACACCCAAGTGCTGGGATGACCGCTGTGTACTGCCAACCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGTCTGGTGTCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGAGACCCTCTACAAACTaGCTAACACTGTCTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSGVTNRASSENIFQWLRPSTN*LTLSHP Trigger: TGGGTGAGACAGTGTTAGCAAGTTTGTAGAGGGTCT...CAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGACACCAGACAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACGTTCTGCAGAGGCAGAACAGGCCACTGTTCAAGTGAATaGGGTGGGAAGCCAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTFCRGRTGHCSSE*GGKPRT Trigger: TGTTCTTGGCTTCCCACCCAATTCACTTGAACAGTG...GCCTGTTCTGCCTCTGCAGAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | CAGTTCAAGGATAGTCTCAGCAAGATACCAAGAGTTTaGAGCCAGCCTGGCCTACCCCAGAGCTTGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QFKDSLSKIPRV*SQPGLPQSLPQ Trigger: TTGAGGCAAGCTCTGGGGTAGGCCAGGCTGGCTTCAAACTCTTGGTATCTTGCTGAGACTATCCTTGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | TGTTCAAGTGAATTGGGTGGGAAGCCAAGAACAGCCTaGTGCCAACATAGCTCACCAAACCAAGGGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CSSELGGKPRTA*CQHSSPNQGLQ Trigger: TTGGAGCCCTTGGTTTGGTGAGCTATGTTGGCAGCAGGCTGTTCTTGGCTTCCCACCCAATTCACTTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | GAAAGTGCTCCAACTCCTACTGCTGGCTTGTTCCTTTaGAGTAAAACAGTGGGAGATCCCTGCCGGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ESAPTPTAGLFL*SKTVGDPCRFL Trigger: GAGAAACCGGCAGGGATCTCCCACTGTTTTACTCCAAAGGAACAAGCCAGCAGTAGGAGTTGGAGCACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACGTTCTGCAGAGGCAGAACAGGCACTCCTACTGCTGGCTaGTTCCTTTGGAGTAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTFCRGRTGTPTAG*FLWSKT Trigger: TGTTTTACTCCAAAGGAACAAGCCAGCAGTAGGAGT...GCCTGTTCTGCCTCTGCAGAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | CCTCAGCCAAGAAAACGGCAACAGAAGCATGGCCTTTaGACTCCTCAGATCTATGAACTGTGTCACGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PQPRKRQQKHGL*TPQIYELCHVS Trigger: GGAGACGTGACACAGTTCATAGATCTGAGGAGTTCAAAGGCCATGCTTCTGTTGCCGTTTTCTTGGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | CTCCTACTGCTGGCTTGTTCCTTTGGAGTAAAACAGTaGGAGATCCCTGCCGGTTTCTCTAACAGGATCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLLLACSFGVKQ*EIPAGFSNRIT Trigger: AGTGATCCTGTTAGAGAAACCGGCAGGGATCTCCCACTGTTTTACTCCAAAGGAACAAGCCAGCAGTAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | GGACTCAAGAGTCATTCCAGATTCCATCTTGGCTGCTaGCATCAGTTACTTGTTCCTATCCGGACTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GLKSHSRFHLGC*HQLLVPIRTQW Trigger: CCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAATGACTCTTGAGTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | AGAGGACTCAAGAGTCATTCCAGATTCCATCTTGGCTaGTGGCATCAGTTACTTGTTCCTATCCGGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGLKSHSRFHLG*WHQLLVPIRTQ Trigger: CTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAATGACTCTTGAGTCCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTACCTCAAGACAACGGCAACTAAACAATCAAGATGGTAACTGGGGCTTGGGAATACACTGCTTCTCTTaGAGACGGCAGGGAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTSRQRQLNNQDGNWGLGIHCFS*RRQGKG Trigger: CCCTTTTCCCTGCCGTCTCAAAGAGAAGCAGTGTAT...TCCCAAGCCCCAGTTACCATCTTGATTGTTTAGTTGCCGTTGTCTTGAGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTCAGCTCACTGAGAGGGTCAGTTCAAGGATAGTCTCAGCAAGATACCAAGAATGCTTGTTTATTTaGGGGCTTAGCAGAGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WSQLTERVSSRIVSARYQECLFI*GLSRGH Trigger: GTGACCTCTGCTAAGCCCCAAAATAAACAAGCATTC...TTGGTATCTTGCTGAGACTATCCTTGAACTGACCCTCTCAGTGAGCTGAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | GACTGTCCACCCCTTTCTTCCTTTTATTATGGCTTCTaGCTACTGAAGGAATGGGCACAGCTTACAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DCPPLSSFYYGF*LLKEWAQLTET Trigger: TGTCTCTGTAAGCTGTGCCCATTCCTTCAGTAGGCAGAAGCCATAATAAAAGGAAGAAAGGGGTGGACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | CAAAAGAGGACTCAAGAGTCATTCCAGATTCCATCTTaGCTGCTGGCATCAGTTACTTGTTCCTATCCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QKRTQESFQIPS*LLASVTCSYPD Trigger: GTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAATGACTCTTGAGTCCTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | CACCCCTTTCTTCCTTTTATTATGGCTTCTGCCTACTaGAGGAATGGGCACAGCTTACAGAGACATGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HPFLPFIMASAY*RNGHSLQRHEQ Trigger: CTGTTCATGTCTCTGTAAGCTGTGCCCATTCCTTCAGTAGGCAGAAGCCATAATAAAAGGAAGAAAGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | CACCTGAGGTTTCTCTTTGGCCTCCACATCTACAAGTaGATATGCATCTGTGAGTATAACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HLRFLFGLHIYK*ICICEYNTHTH Trigger: GTGTGTGTGTGTGTTATACTCACAGATGCATATTCACTTGTAGATGTGGAGGCCAAAGAGAAACCTCAGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | TTGCTGGGACCCTGGCATTTCAAAGGCTCTCAGCTATaGACCCTGTGTCTTCAATTAATAACTCCTTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLGPWHFKGSQL*TLCLQLITPLF Trigger: GAATAAAGGAGTTATTAATTGAAGACACAGGGTGCATAGCTGAGAGCCTTTGAAATGCCAGGGTCCCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR TCA 72 bp | ACAAAGTCAACATCAAAAGAACTGAAACAAGGCTGGTaGTGTGCTAGTCAGTATTCAGCCTGCTATTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TKSTSKELKQGW*CASQYSACYSL Trigger: CAAGGAATAGCAGGCTGAATACTGACTAGCACATCACCAGCCTTGTTTCAGTTCTTTTGATGTTGACTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR GCA 72 bp | GGTGATGTGCTAGTCAGTATTCAGCCTGCTATTCCTTaGAGTGTATTCAATAAATCTGTTTACCTCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GDVLVSIQPAIP*SVFNKSVYLKT Trigger: TGTCTTGAGGTAAACAGATTTATTGAATACACTGCAAGGAATAGCAGGCTGAATACTGACTAGCACATCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CCA 72 bp | ACACACGCACACACACACACACACAAAAAGGTCCTATaGACACTAACATTATCAAAACTAGAATGCTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: THAHTHTHKKVL*TLTLSKLECLF Trigger: AAACAAGCATTCTAGTTTTGATAATGTTAGTGTCCATAGGACCTTTTTGTGTGTGTGTGTGTGTGCGTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR GCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCTCTTCCCCACGGTGGTaGTATTGGCCATGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTAASLRSPTPALVAASPSSPRW*YWPWSL Trigger: AAGGCTCCATGGCCAATAGCACCACCGTGGGGAAGA...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | GAGCAGCCACCCTCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTTGTGCATCCACATGTTCCACTaGCGCTCTAGATGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQPPSPKPMVPHNPQGLCIHMFH*RSRCSW Trigger: CCAGCTGCATCTAGAGCGCCAGTGGAACATGTGGAT...GCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGAGGGTGGCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 72 bp | TCCCCTAAGCCCATGGTCCCTCACAATCCACAAGGCTaGTGCTGGGCGTGGGTCAGGATGATGACAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPKPMVPHNPQG*CWAWVRMMTGK Trigger: CTTCCCTGTCATCATCCTGACCCACGCCCAGCACAAGCCTTGTGGATTGTGAGGGACCATGGGCTTAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCGCCATTCTCTGTTTGTaGGCCTCTGTGGTACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTAASLRSPTPALVAASPAILCL*ASVVHA Trigger: AGCATGTACCACAGAGGCTCACAAACAGAGAATGGC...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTGGCAGAGAAAGTGCTCCAACTCCTACTGCTGGCTTGTTCCTTTGGAGCACCTGTCCCAGGAGTaGCTGCTATCTTCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VWWQRKCSNSYCWLVPLEHLSQE*LLSSPR Trigger: CCGTGGGGAAGATAGCAGGCACTCCTGGGACAGGTG...CTCCAAAGGAACAAGCCAGCAGTAGGAGTTGGAGCACTTTCTCTGCCACCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | TCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGTAGGTTCTGGAGAGGCCATGGAGCCTTGTaGCGGGGTGCTAGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTEHPLRTSSSGCRFWRGHGAL*RGASWL Trigger: GAGCCAGCTAGCACCCCGCCACAAGGCTCCATGGCC...TCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGTACTGCCACCTGCTGACTGCAGCGCTCCCAGCCTTGCTGGGACCCTGTTCTTGGTCAATACCTaGTTGTTTTCAGGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPVLPPADCSAPSLAGTLFLVNT*LFSGLR Trigger: TCTCAGCCCTGAAAACAACCAGGTATTGACCAAGAA...CAGGGTCCCAGCAAGGCTGGGAGCGCTGCAGTCAGCAGGTGGCAGTACAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACGTTCTGCAGAGGCAGAACAGGCTGTCCCAGGAGTGCCTaGTATCTTCCCCACGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTFCRGRTGCPRSA*YLPHGG Trigger: ACCACCGTGGGGAAGATAGCAGGCACTCCTGGGACA...GCCTGTTCTGCCTCTGCAGAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | CTGCCTACTGAAGGAATGGGCACAGCTTACAGAGACATGAACAGTCCTTCGGTGTGGTGCTATTGGCCATaGAGCCTTGTGGCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEGMGTAYRDMNSPSVWCYWP*SLVAGC Trigger: GCACCCCGCCACAAGGCTCCATGGCCAATAGCACCA...CACCGAAGGACTGTTCATGTCTCTGTAAGCTGTGCCCATTCCTTCAGTAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCAGCTCACTGAGAGGGTCAGTTCAAGGATAGTCTCAGCAAGATACCAACCACGGTGGTGCTATTaGCCATGGAGCCTTGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WSQLTERVSSRIVSARYQPRWCY*PWSLVA Trigger: CGCCACAAGGCTCCATGGCCAATAGCACCACCGTGG...TTGGTATCTTGCTGAGACTATCCTTGAACTGACCCTCTCAGTGAGCTGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 72 bp | TGGGTCAGGATGATGACAGGGAAGAACATCCTGCTGTaGAGAGAGGCCCTGCTTTCCTCCGATGACAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: WVRMMTGKNILL*REALLSSDDRI Trigger: GATTCTGTCATCGGAGGAAAGCAGGGCCTCTCTCAACAGCAGGATGTTCTTCCCTGTCATCATCCTGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 72 bp | ATTCCAGATTCCATCTTGGCTGCTGGCATCAGTTACTaGTTCCTATCCGGACTCAGTGGGACCCCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPDSILAAGISY*FLSGLSGTPLL Trigger: CAGCAGAGGGGTCCCACTGAGTCCGGATAGGAACAAGTAACTGATGCCAGCAGCCAAGATGGAATCTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR GCA 90 bp | CAAACAGCTGCATCACTGAGAAGTCCCACCCCAGCATTGGTGGCAGCCTCCCCCACATCTTCATCCAGCTaGTCATTAGGATCTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTAASLRSPTPALVAASPTSSSS*SLGSTS Trigger: AGAAGTAGATCCTAATGAGCAGCTGGATGAAGATGT...GGGGGAGGCTGCCACCAATGCTGGGGTGGGACTTCTCAGTGATGCAGCTGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCAGCTCACTGAGAGGGTCAGTTCAAGGATAGTCTCAGCAAGATACCAACTATCTTCCCCACGGTaGTGCTATTGGCCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSQLTERVSSRIVSARYQLSSPR*CYWPWS Trigger: GCTCCATGGCCAATAGCACCACCGTGGGGAAGATAG...TTGGTATCTTGCTGAGACTATCCTTGAACTGACCCTCTCAGTGAGCTGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCAGCTCACTGAGAGGGTCAGTTCAAGGATAGTCTCAGCAAGATACCAACTCAGAGCCAAAGCCTaGGATCCACATGTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WSQLTERVSSRIVSARYQLRAKA*DPHVPL Trigger: CAGTGGAACATGTGGATCCCAGGCTTTGGCTCTGAG...TTGGTATCTTGCTGAGACTATCCTTGAACTGACCCTCTCAGTGAGCTGAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 72 bp | CCTGCCTTGAAAAACCAAAGACACTGTTCAAGTGAATaGGGTGGGAAGCCAAGAACAGCCTGCTGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PALKNQRHCSSE*GGKPRTACCQH Trigger: ATGTTGGCAGCAGGCTGTTCTTGGCTTCCCACCCAATTCACTTGAACAGTGTCTTTGGTTTTTCAAGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR GCA 90 bp | TCACCAACAGAGCATCCTCTGAGAACATCTTCCAGTGGCTGTAGGTTCTGGAGATGTTTTCCGGATCAGTaGCATTCTCTGTTTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTEHPLRTSSSGCRFWRCFPDQ*HSLFVS Trigger: GCTCACAAACAGAGAATGGCACTGATCCGGAAAACA...TCTCCAGAACCTACAGCCACTGGAAGATGTTCTCAGAGGATGCTCTGTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR TCA 90 bp | CACACACACAAAAAGGTCCTATGGACACTAACATTATCAAAACTAGAATGCTTGGGTTGTTTTCAGGGCTaGGACGACCACCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHKKVLWTLTLSKLECLGCFQG*DDHLSQ Trigger: CTGGGACAGGTGGTCGTCTCAGCCCTGAAAACAACC...CAAGCATTCTAGTTTTGATAATGTTAGTGTCCATAGGACCTTTTTGTGTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| 3UTR CAA 72 bp | ACACTAACATTATCAAAACTAGAATGCTTGTTTATTTaGGGGCTTAGCAGAGGTCACTGTGTCTGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTLSKLECLFI*GLSRGHCVWWQ Trigger: CTGCCACCAGACACAGTGACCTCTGCTAAGCCCCAAAATAAACAAGCATTCTAGTTTTGATAATGTTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS GCA 90 bp | TCCACTGGCGCTCTAGATGCAGCTGGACGTCTTTTACCTCTAGGGTaGTGGACTTGCGGTGCCGAGCAAGCTGGCAGGCAGCTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: STGALDAAGRLLPLG*WTCGAEQAGRQLSP Trigger: TGGTGACAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGCGCCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 90 bp | ACTGGCGCTCTAGATGCAGCTGGACGTCTTTTACCTCTAGGGTGCTaGACTTGCGGTGCCGAGCAAGCTGGCAGGCAGCTGTCACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TGALDAAGRLLPLGC*TCGAEQAGRQLSPH Trigger: GTGTGGTGACAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGCGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS GCA 90 bp | CTGGTTGTTTTCAGGGCTGAGACGACCACCTGTCCCAGGAGTGCCTaGTATCTTCCCCACGGTGGTGCTATTGGCCATGGAGCCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVVFRAETTTCPRSA*YLPHGGAIGHGALW Trigger: CCACAAGGCTCCATGGCCAATAGCACCACCGTGGGGAAGATAGCAGGCACTCCTGGGACAGGTGGTCGTCTCAGCCCTGAAAACAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 90 bp | CCAAAGCCTGGGATCCACATGTTCCACTGGCGCTCTAGATGCAGCTaGACGTCTTTTACCTCTAGGGTGCTGGACTTGCGGTGCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKPGIHMFHWRSRCS*TSFTSRVLDLRCRA Trigger: TGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGCGCCAGTGGAACATGTGGATCCCAGGCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS GCA 90 bp | TCAGAGCCAAAGCCTGGGATCCACATGTTCCACTGGCGCTCTAGATaGAGCTGGACGTCTTTTACCTCTAGGGTGCTGGACTTGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SEPKPGIHMFHWRSR*SWTSFTSRVLDLRC Trigger: GCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGCGCCAGTGGAACATGTGGATCCCAGGCTTTGGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 90 bp | ACGTCTTTTACCTCTAGGGTGCTGGACTTGCGGTGCCGAGCAAGCTaGCAGGCAGCTGTCACCACACTCTCAATAAAATCATCAGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: TSFTSRVLDLRCRAS*QAAVTTLSIKSSAI Trigger: GATCGCTGATGATTTTATTGAGAGTGTGGTGACAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS-3UTR CAA 90 bp | AATTCCCCTGTCCCTTTCGGTCCTCAAAAGAGGACTCAAGAGTCATTCCAGATTATTGGCCATGGAGCCTaGTGGCGGGGTGCTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSPVPFGPQKRTQESFQIIGHGA*WRGASW Trigger: CCAGCTAGCACCCCGCCACAAGGCTCCATGGCCAAT...AATCTGGAATGACTCTTGAGTCCTCTTTTGAGGACCGAAAGGGACAGGGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCAAGACAACGGCAACTAAACAATCAAGATGGTAACTGGGGCTTGGGACCCACGGTGGTGCTATaGGCCATGGAGCCTTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FTSRQRQLNNQDGNWGLGPTVVL*AMEPCG Trigger: GCCACAAGGCTCCATGGCCAATAGCACCACCGTGGG...TCCCAAGCCCCAGTTACCATCTTGATTGTTTAGTTGCCGTTGTCTTGAGGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS-3UTR CAA 90 bp | TGGTCTCAGCTCACTGAGAGGGTCAGTTCAAGGATAGTCTCAGCAAGATACCAATTGGTCAATACCTGGTaGTTTTCAGGGCTGAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: WSQLTERVSSRIVSARYQLVNTW*FSGLRR Trigger: TCGTCTCAGCCCTGAAAACAACCAGGTATTGACCAA...TTGGTATCTTGCTGAGACTATCCTTGAACTGACCCTCTCAGTGAGCTGAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030731.11 |
||
| CDS CCA 72 bp | CACCTGTCCCAGGAGTGCCTGCTATCTTCCCCACGGTaGTGCTATTGGCCATGGAGCCTTGTGGCGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HLSQECLLSSPR*CYWPWSLVAGC Trigger: GCACCCCGCCACAAGGCTCCATGGCCAATAGCACCACCGTGGGGAAGATAGCAGGCACTCCTGGGACAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CAA 72 bp | CCAGGAGTGCCTGCTATCTTCCCCACGGTGGTGCTATaGGCCATGGAGCCTTGTGGCGGGGTGCTAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGVPAIFPTVVL*AMEPCGGVLAG Trigger: GCCAGCTAGCACCCCGCCACAAGGCTCCATGGCCAATAGCACCACCGTGGGGAAGATAGCAGGCACTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CAA 90 bp | CCACCTGTCCCAGGAGTGCCTGCTATCTTCCCCACGGTGGTGCTATaGGCCATGGAGCCTTGTGGCGGGGTGCTAGCTGGCTCTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PPVPGVPAIFPTVVL*AMEPCGGVLAGSGF Trigger: AAAACCAGAGCCAGCTAGCACCCCGCCACAAGGCTCCATGGCCAATAGCACCACCGTGGGGAAGATAGCAGGCACTCCTGGGACAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS GCA 72 bp | GCAGCTGGACGTCTTTTACCTCTAGGGTGCTGGACTTaGGGTGCCGAGCAAGCTGGCAGGCAGCTGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AAGRLLPLGCWT*GAEQAGRQLSP Trigger: TGGTGACAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CAA 72 bp | TGCAGCTGGACGTCTTTTACCTCTAGGGTGCTGGACTaGCGGTGCCGAGCAAGCTGGCAGGCAGCTGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CSWTSFTSRVLD*RCRASWQAAVT Trigger: GGTGACAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS GCA 72 bp | GCTCTAGATGCAGCTGGACGTCTTTTACCTCTAGGGTaGTGGACTTGCGGTGCCGAGCAAGCTGGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALDAAGRLLPLG*WTCGAEQAGRQ Trigger: CTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 72 bp | CTAGATGCAGCTGGACGTCTTTTACCTCTAGGGTGCTaGACTTGCGGTGCCGAGCAAGCTGGCAGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LDAAGRLLPLGC*TCGAEQAGRQL Trigger: CAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 72 bp | GGGATCCACATGTTCCACTGGCGCTCTAGATGCAGCTaGACGTCTTTTACCTCTAGGGTGCTGGACTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GIHMFHWRSRCS*TSFTSRVLDLR Trigger: CCGCAAGTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGCGCCAGTGGAACATGTGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS GCA 72 bp | AAGCCTGGGATCCACATGTTCCACTGGCGCTCTAGATaGAGCTGGACGTCTTTTACCTCTAGGGTGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KPGIHMFHWRSR*SWTSFTSRVLD Trigger: GTCCAGCACCCTAGAGGTAAAAGACGTCCAGCTGCATCTAGAGCGCCAGTGGAACATGTGGATCCCAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 72 bp | ACCTCTAGGGTGCTGGACTTGCGGTGCCGAGCAAGCTaGCAGGCAGCTGTCACCACACTCTCAATAAAATCA | + |
|
Preference number: 6 (lower is better) Translates to: TSRVLDLRCRAS*QAAVTTLSIKS Trigger: TGATTTTATTGAGAGTGTGGTGACAGCTGCCTGCCAGCTTGCTCGGCACCGCAAGTCCAGCACCCTAGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS TCA 72 bp | ATTTCTTCTTGGTCAATACCTGGTTGTTTTCAGGGCTaGGACGACCACCTGTCCCAGGAGTGCCTGCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: ISSWSIPGCFQG*DDHLSQECLLS Trigger: AGATAGCAGGCACTCCTGGGACAGGTGGTCGTCTCAGCCCTGAAAACAACCAGGTATTGACCAAGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030731.11 ENSMUST00000105963.2 |
||
| CDS CCA 72 bp | AAACTGGAGAGGTTGATTAGCGCTGAAGGGCCAAACTaGTTCATAATCTGCCGAGCTTTAGACTTCAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: KLERLISAEGPN*FIICRALDFNS Trigger: TGAGTTGAAGTCTAAAGCTCGGCAGATTATGAACCAGTTTGGCCCTTCAGCGCTAATCAACCTCTCCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105963.2 |
||