Pregenerated sensors for TAF11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024218Ensembl transcript IDs: ENSMUST00000025057.5, ENSMUST00000114848.8, ENSMUST00000233439.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGCATGCCTTGTAGGTGTGACCGAAACATTAAAATCGGCATCCTaGGTCCCGAGCTCACCACCACCAAAGCCCCAGGACAGAAGCCCG | + |
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Preference number: 1 (lower is better) Translates to: TACLVGVTETLKSAS*VPSSPPPKPQDRSP Trigger: CGGGCTTCTGTCCTGGGGCTTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACAAGGCATGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR TCA 90 bp | GAACAGTCTCCCTTAGATTTAGAAGAAGGTGATCTTCTTGTGCTTTaGGTTGGGGATTTGCCCCTTGGACTTCAACCTCCGGACGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: EQSPLDLEEGDLLVL*VGDLPLGLQPPDGL Trigger: GAGGCCGTCCGGAGGTTGAAGTCCAAGGGGCAAATCCCCAACTCAAAGCACAAGAAGATCACCTTCTTCTAAATCTAAGGGAGACTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR TCA 90 bp | GACTCTGAGAAGTCTGGAACAGTCTCCCTTAGATTTAGAAGAAGGTaGTCTTCTTGTGCTTTGAGTTGGGGATTTGCCCCTTGGACTTCA | + |
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Preference number: 1 (lower is better) Translates to: DSEKSGTVSLRFRRR*SSCALSWGFAPWTS Trigger: TGAAGTCCAAGGGGCAAATCCCCAACTCAAAGCACAAGAAGATCACCTTCTTCTAAATCTAAGGGAGACTGTTCCAGACTTCTCAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCAACGGCCTCCCTCATGTaGTTGGGCTGCAGGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSTASLM*LGCRGG Trigger: GCCACCCCTGCAGCCCAAGCACATGAGGGAGGCCGT...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCGAGCAAGAAACAACCTaGATCTTAGCAACTTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: TTTKAPGQKPDSEKSGTVEQETT*ILATLG Trigger: ACCTAAAGTTGCTAAGATTCAGGTTGTTTCTTGCTC...GACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTCTTTCCCACACAGGTTaGAAAAGTTTAATGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSLSHTG*KSLMIP Trigger: AGGGATCATTAAACTTTTCCAACCTGTGTGGGAAAG...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCCTTTCCCACACAGGTTaGAAAAGTTTAATGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: TTTKAPGQKPDSEKSGTVLSHTG*KSLMIP Trigger: AGGGATCATTAAACTTTTCCAACCTGTGTGGGAAAG...GACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAAAAGAAGAGACCAGGATTTGCATCTTCTGAATCTCATCTTCGTCCACGGCTGCTGTTACATCTaGGACATCCTGACTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LRKRRDQDLHLLNLIFVHGCCYI*DILTLE Trigger: CTCAAGAGTCAGGATGTCTCAGATGTAACAGCAGCC...GTGGACGAAGATGAGATTCAGAAGATGCAAATCCTGGTCTCTTCTTTTTCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAAAGGACAGTCCATGACTaGGTGAAGGCAAGTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SNFRFQYEATRVVLFFSERTVHD*VKASLS Trigger: ACTCAGACTTGCCTTCACTCAGTCATGGACTGTCCT...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAACGCCTTGGGGAAAGCTaGCCTGCGATACATTTCATA | + |
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Preference number: 2 (lower is better) Translates to: SNFRFQYEATRVVLFFSERLGES*PAIHFI Trigger: TATGAAATGTATCGCAGGTCAGCTTTCCCCAAGGCG...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCAAGATTTAGAAGAAGGTaGTCTTCTTGTGCTTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSRFRRR*SSCALS Trigger: ACTCAAAGCACAAGAAGATCACCTTCTTCTAAATCT...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAATGGGGAAAGCTGACCTaGGATACATTTCATAACGGT | + |
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Preference number: 2 (lower is better) Translates to: TSPQIIASLCFENQSKKQWGKLT*DTFHNG Trigger: ACCGTTATGAAATGTATCGCAGGTCAGCTTTCCCCA...TTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR TCA 90 bp | CCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAACCTGAAGAGCAAGAAACAACCTaGATCTTAGCAACTTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: PQIIASLCFENQSKKQPEEQETT*ILATLG Trigger: ACCTAAAGTTGCTAAGATTCAGGTTGTTTCTTGCTC...TTCAGGTTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR GCA 72 bp | CTTGTAGGTGTGACCGAAACATTAAAATCGGCATCCTaGGTCCCGAGCTCACCACCACCAAAGCCCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LVGVTETLKSAS*VPSSPPPKPQD Trigger: GTCCTGGGGCTTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCAGCCTCCCTCATGTGCTaGGGCTGCAGGGGTGGCGTT | + |
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Preference number: 3 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSASLMC*GCRGGV Trigger: AACGCCACCCCTGCAGCCCAAGCACATGAGGGAGGC...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCACTTTTAATGGCCGCCTaGGGGAAAGCTGACCTGCGA | + |
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Preference number: 3 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSLLMAA*GKADLR Trigger: TCGCAGGTCAGCTTTCCCCAAGGCGGCCATTAAAAG...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR TCA 72 bp | CCCTTAGATTTAGAAGAAGGTGATCTTCTTGTGCTTTaGGTTGGGGATTTGCCCCTTGGACTTCAACCTCCG | + |
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Preference number: 3 (lower is better) Translates to: PLDLEEGDLLVL*VGDLPLGLQPP Trigger: CGGAGGTTGAAGTCCAAGGGGCAAATCCCCAACTCAAAGCACAAGAAGATCACCTTCTTCTAAATCTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR TCA 72 bp | AAGTCTGGAACAGTCTCCCTTAGATTTAGAAGAAGGTaGTCTTCTTGTGCTTTGAGTTGGGGATTTGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: KSGTVSLRFRRR*SSCALSWGFAP Trigger: AGGGGCAAATCCCCAACTCAAAGCACAAGAAGATCACCTTCTTCTAAATCTAAGGGAGACTGTTCCAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCAAAGAAGGTGATCTTCTaGTGCTTTGAGTTGGGGATT | + |
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Preference number: 3 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSKKVIF*CFELGI Trigger: AATCCCCAACTCAAAGCACAAGAAGATCACCTTCTT...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCATCGCAAGTTTATGTTTaGAAAACCAGAGCAAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSSQVYV*KTRARN Trigger: GTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGA...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAACCTGAAATGAAGCCACTAGAGTaGTTCTGTTTTTCTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PQIIASLCFENQSKKQPEMKPLE*FCFSLK Trigger: TTTCAGAGAAAAACAGAACAACTCTAGTGGCTTCAT...TTCAGGTTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAACCTGAATCGCAAGTTTATGTTTaGAAAACCAGAGCAAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: PQIIASLCFENQSKKQPESQVYV*KTRARN Trigger: GTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGA...TTCAGGTTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAATCTAGTTTCAGCTTTTaGGCTGCAGGAGTAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: SNFRFQYEATRVVLFFSESSFSF*AAGVSK Trigger: CTTACTTACTCCTGCAGCCAAAAAGCTGAAACTAGA...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR GCA 90 bp | CTCACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAACGGCCTCCCTCATGTaGTTGGGCTGCAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LTTTKAPGQKPDSEKSGTTASLM*LGCRGG Trigger: GCCACCCCTGCAGCCCAAGCACATGAGGGAGGCCGT...TGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTTCCCTCAGTGTCGGCTaGCACCAAAGCCCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSSLSVG*HQSPRS Trigger: ACTCCTGGGGCTTTGGTGGCAGCCGACACTGAGGGA...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| CDS-3UTR CCA 90 bp | ACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCCCTCCCTCATGTGCTTaGGCTGCAGGGGTGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: TTTKAPGQKPDSEKSGTVPPSCA*AAGVAF Trigger: AAACGCCACCCCTGCAGCCCAAGCACATGAGGGAGG...GACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTAGACATCCTGACTCTTaGGCTCGCTTTCCTCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSRHPDS*ARFPPP Trigger: CGGCGGAGGAAAGCGAGCTCAAGAGTCAGGATGTCT...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTACACAGAGGTGCCAGTaGTGGACTGGATCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSTQRCQ*WTGSAF Trigger: AAAGGCTGATCCAGTCCATCACTGGCACCTCTGTGT...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAATCCCTCAGTGTCGGCTaGCACCAAAGCCCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: CDRNIKIGILRPELTTTKSLSVG*HQSPRS Trigger: ACTCCTGGGGCTTTGGTGGCAGCCGACACTGAGGGA...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| CDS-3UTR CCA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAACCTCCCTCATGTGCTTaGGCTGCAGGGGTGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: CDRNIKIGILRPELTTTKPPSCA*AAGVAF Trigger: AAACGCCACCCCTGCAGCCCAAGCACATGAGGGAGG...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | AAGCGTGTCACGGTGACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACAGCCCTCGTCTCCTCTaGCTCCCCTGGCTCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KRVTVTSPQIIASLCFENSPRLL*LPWLPA Trigger: GGCGGGGAGCCAGGGGAGTCAGAGGAGACGAGGGCT...GTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGTCACCGTGACACGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| CDS-3UTR TCA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAAAGACATCCTGACTCTTaGGCTCGCTTTCCTCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: CDRNIKIGILRPELTTTKRHPDS*ARFPPP Trigger: CGGCGGAGGAAAGCGAGCTCAAGAGTCAGGATGTCT...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | CTCACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGGCTGCTGTTACATCTaGGACATCCTGACTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LTTTKAPGQKPDSEKSGTGCCYI*DILTLE Trigger: CTCAAGAGTCAGGATGTCTCAGATGTAACAGCAGCC...TGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTTTGGGAGCTCCACACTaGACAGAGCTCTGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSLGAPH*TELCSS Trigger: AGAAGAACAGAGCTCTGTTCAGTGTGGAGCTCCCAA...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR CCA 90 bp | ACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCGTGCCAGTGATGGACTaGATCAGCCTTTTAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTTKAPGQKPDSEKSGTVVPVMD*ISLLMA Trigger: GGCCATTAAAAGGCTGATCCAGTCCATCACTGGCAC...GACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTGATCTTCTTGTGCTTTaGGTTGGGGATTTGCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSDLLVL*VGDLPL Trigger: AAGGGGCAAATCCCCAACTCAAAGCACAAGAAGATC...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | CTCACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACATCTTCGTCCACCTTCTaGTTCTTCTCCTTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LTTTKAPGQKPDSEKSGTSSSTF*FFSFLS Trigger: GGACAAGAAGGAGAAGAAGCAGAAGGTGGACGAAGA...TGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | ACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTGGGGAAAGCTGACCTaGGATACATTTCATAACGGT | + |
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Preference number: 4 (lower is better) Translates to: TTTKAPGQKPDSEKSGTVWGKLT*DTFHNG Trigger: ACCGTTATGAAATGTATCGCAGGTCAGCTTTCCCCA...GACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | ACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAAAGCCCTCGTCTCCTCTaGCTCCCCTGGCTCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TSPQIIASLCFENQSKKQSPRLL*LPWLPA Trigger: GGCGGGGAGCCAGGGGAGTCAGAGGAGACGAGGGCT...TTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| CDS-3UTR TCA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAACGCCTTGGGGAAAGCTaGCCTGCGATACATTTCATA | + |
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Preference number: 4 (lower is better) Translates to: CDRNIKIGILRPELTTTKRLGES*PAIHFI Trigger: TATGAAATGTATCGCAGGTCAGCTTTCCCCAAGGCG...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | TGTAGGTGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCTTTGAGTTGGGGATTTaGCCCTTGGACTTCAACCTC | + |
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Preference number: 4 (lower is better) Translates to: CRCDRNIKIGILRPELTTFELGI*PLDFNL Trigger: GAGGTTGAAGTCCAAGGGGCAAATCCCCAACTCAAA...GGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | CCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCTAAGGTGATCTTCTTGTaGTTTGAGTTGGGGATTTGC | + |
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Preference number: 4 (lower is better) Translates to: PPPKPQDRSPTLRSLEQSKVIFL*FELGIC Trigger: GCAAATCCCCAACTCAAAGCACAAGAAGATCACCTT...AGACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CCA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAAGTGCCAGTGATGGACTaGATCAGCCTTTTAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: CDRNIKIGILRPELTTTKVPVMD*ISLLMA Trigger: GGCCATTAAAAGGCTGATCCAGTCCATCACTGGCAC...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CCA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAACTTCCATGTGTGTCTTaGGAGCTCCACACTGAACAG | + |
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Preference number: 4 (lower is better) Translates to: CDRNIKIGILRPELTTTKLPCVS*ELHTEQ Trigger: CTGTTCAGTGTGGAGCTCCCAAGACACACATGGAAG...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR TCA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAAAGCCCTCGTCTCCTCTaGCTCCCCTGGCTCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SNFRFQYEATRVVLFFSESPRLL*LPWLPA Trigger: GGCGGGGAGCCAGGGGAGTCAGAGGAGACGAGGGCT...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| CDS-3UTR TCA 90 bp | TGTAGGTGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCAGAGCTCTGTTCTTCTaGTCCTTTCTCTACTGGATC | + |
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Preference number: 4 (lower is better) Translates to: CRCDRNIKIGILRPELTTRALFF*SFLYWI Trigger: GATCCAGTAGAGAAAGGATCAGAAGAACAGAGCTCT...GGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAAAAAGAAGAGACCAGGATTTGCATCTTCTGAATCTCATCTTCGTCCACTCCCTCAGTGTCGGCTaGCACCAAAGCCCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LRKRRDQDLHLLNLIFVHSLSVG*HQSPRS Trigger: ACTCCTGGGGCTTTGGTGGCAGCCGACACTGAGGGA...GTGGACGAAGATGAGATTCAGAAGATGCAAATCCTGGTCTCTTCTTTTTCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR GCA 90 bp | ACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAAACGGCCTCCCTCATGTaGTTGGGCTGCAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TSPQIIASLCFENQSKKQTASLM*LGCRGG Trigger: GCCACCCCTGCAGCCCAAGCACATGAGGGAGGCCGT...TTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | TCCCTCACAAAATCCATAGGAGAACCTGAAATGTTAATGGTGAGAAGCGTGTCAGGCTGCTGTTACATCTaGGACATCCTGACTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SLTKSIGEPEMLMVRSVSGCCYI*DILTLE Trigger: CTCAAGAGTCAGGATGTCTCAGATGTAACAGCAGCC...TGACACGCTTCTCACCATTAACATTTCAGGTTCTCCTATGGATTTTGTGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | AAGCGTGTCACGGTGACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACTTTGAGTTGGGGATTTaGCCCTTGGACTTCAACCTC | + |
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Preference number: 4 (lower is better) Translates to: KRVTVTSPQIIASLCFENFELGI*PLDFNL Trigger: GAGGTTGAAGTCCAAGGGGCAAATCCCCAACTCAAA...GTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGTCACCGTGACACGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CCA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAATGGGGATTTGCCCCTTaGACTTCAACCTCCGGACGG | + |
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Preference number: 4 (lower is better) Translates to: SNFRFQYEATRVVLFFSEWGFAP*TSTSGR Trigger: CCGTCCGGAGGTTGAAGTCCAAGGGGCAAATCCCCA...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAAACACAGAGGTGCCAGTaGTGGACTGGATCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SNFRFQYEATRVVLFFSETQRCQ*WTGSAF Trigger: AAAGGCTGATCCAGTCCATCACTGGCACCTCTGTGT...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | CCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAACCTGAATCTTCGTCCACCTTCTaGTTCTTCTCCTTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PQIIASLCFENQSKKQPESSSTF*FFSFLS Trigger: GGACAAGAAGGAGAAGAAGCAGAAGGTGGACGAAGA...TTCAGGTTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR GCA 90 bp | CCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAACCTGAATGGGGAAAGCTGACCTaGGATACATTTCATAACGGT | + |
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Preference number: 4 (lower is better) Translates to: PQIIASLCFENQSKKQPEWGKLT*DTFHNG Trigger: ACCGTTATGAAATGTATCGCAGGTCAGCTTTCCCCA...TTCAGGTTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR TCA 90 bp | AGCAACTTTAGGTTTCAATATGAAGCCACTAGAGTTGTTCTGTTTTTCTCTGAAGATCTTCTTGTGCTTTaGGTTGGGGATTTGCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: SNFRFQYEATRVVLFFSEDLLVL*VGDLPL Trigger: AAGGGGCAAATCCCCAACTCAAAGCACAAGAAGATC...TTCAGAGAAAAACAGAACAACTCTAGTGGCTTCATATTGAAACCTAAAGTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | TGTAGGTGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCGCCTCCCTCATGTGCTaGGGCTGCAGGGGTGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: CRCDRNIKIGILRPELTTASLMC*GCRGGV Trigger: AACGCCACCCCTGCAGCCCAAGCACATGAGGGAGGC...GGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | ACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAGTCCTTTTAATGGCCGCCTaGGGGAAAGCTGACCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: TTTKAPGQKPDSEKSGTVLLMAA*GKADLR Trigger: TCGCAGGTCAGCTTTCCCCAAGGCGGCCATTAAAAG...GACTGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | TGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCACCAAACTTTTAATGGCCGCCTaGGGGAAAGCTGACCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: CDRNIKIGILRPELTTTKLLMAA*GKADLR Trigger: TCGCAGGTCAGCTTTCCCCAAGGCGGCCATTAAAAG...TTTGGTGGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | CTCACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACAAAGAAGGTGATCTTCTaGTGCTTTGAGTTGGGGATT | + |
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Preference number: 5 (lower is better) Translates to: LTTTKAPGQKPDSEKSGTKKVIF*CFELGI Trigger: AATCCCCAACTCAAAGCACAAGAAGATCACCTTCTT...TGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | CTCACCACCACCAAAGCCCCAGGACAGAAGCCCGACTCTGAGAAGTCTGGAACATGCTTCTTCTCCTTCTaGTCCTTAATGTCTAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LTTTKAPGQKPDSEKSGTCFFSF*SLMSSF Trigger: GAAACTAGACATTAAGGACAAGAAGGAGAAGAAGCA...TGTTCCAGACTTCTCAGAGTCGGGCTTCTGTCCTGGGGCTTTGGTGGTGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS TCA 90 bp | GATGTCAGTACAGTCCCTTCCATGTGTGTCTTGGGAGCTCCACACTaGACAGAGCTCTGTTCTTCTGATCCTTTCTCTACTGGATCACGA | + |
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Preference number: 5 (lower is better) Translates to: DVSTVPSMCVLGAPH*TELCSSDPFSTGSR Trigger: TCGTGATCCAGTAGAGAAAGGATCAGAAGAACAGAGCTCTGTTCAGTGTGGAGCTCCCAAGACACACATGGAAGGGACTGTACTGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR CAA 90 bp | TGTAGGTGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCTCTAGTTTCAGCTTTTaGGCTGCAGGAGTAAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: CRCDRNIKIGILRPELTTSSFSF*AAGVSK Trigger: CTTACTTACTCCTGCAGCCAAAAAGCTGAAACTAGA...GGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | ACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAAGCCTCCCTCATGTGCTaGGGCTGCAGGGGTGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: TSPQIIASLCFENQSKKQASLMC*GCRGGV Trigger: AACGCCACCCCTGCAGCCCAAGCACATGAGGGAGGC...TTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS TCA 90 bp | CATGTGTGTCTTGGGAGCTCCACACTGAACAGAGCTCTGTTCTTCTaGTCCTTTCTCTACTGGATCACGAGATCTTTCCCAATACTCGCT | + |
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Preference number: 5 (lower is better) Translates to: HVCLGSSTLNRALFF*SFLYWITRSFPILA Trigger: AGCGAGTATTGGGAAAGATCTCGTGATCCAGTAGAGAAAGGATCAGAAGAACAGAGCTCTGTTCAGTGTGGAGCTCCCAAGACACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS-3UTR CAA 90 bp | TGTAGGTGTGACCGAAACATTAAAATCGGCATCCTGCGTCCCGAGCTCACCACCTGCTTCTTCTCCTTCTaGTCCTTAATGTCTAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CRCDRNIKIGILRPELTTCFFSF*SLMSSF Trigger: GAAACTAGACATTAAGGACAAGAAGGAGAAGAAGCA...GGTGGTGAGCTCGGGACGCAGGATGCCGATTTTAATGTTTCGGTCACACCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | CCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAACCTGAATTCTTGTGCTTTGAGTaGGGGATTTGCCCCTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: PQIIASLCFENQSKKQPEFLCFE*GICPLD Trigger: GTCCAAGGGGCAAATCCCCAACTCAAAGCACAAGAA...TTCAGGTTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | ACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAATTCTTGTGCTTTGAGTaGGGGATTTGCCCCTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: TSPQIIASLCFENQSKKQFLCFE*GICPLD Trigger: GTCCAAGGGGCAAATCCCCAACTCAAAGCACAAGAA...TTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS-3UTR CAA 90 bp | ACTTCACCGCAGATAATCGCAAGTTTATGTTTTGAAAACCAGAGCAAGAAACAAAGAAGAGACCAGGATTaGCATCTTCTGAATCTCATC | + |
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Preference number: 5 (lower is better) Translates to: TSPQIIASLCFENQSKKQRRDQD*HLLNLI Trigger: GATGAGATTCAGAAGATGCAAATCCTGGTCTCTTCT...TTGTTTCTTGCTCTGGTTTTCAAAACATAAACTTGCGATTATCTGCGGTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS GCA 72 bp | CCTGTCGGTTTCCTCCGGGATTCCCTCAGTGTCGGCTaGCACCAAAGCCCCAGGAGTAGCCCTCGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVGFLRDSLSVG*HQSPRSSPRLL Trigger: GAGGAGACGAGGGCTACTCCTGGGGCTTTGGTGGCAGCCGACACTGAGGGAATCCCGGAGGAAACCGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 ENSMUST00000233439.2 |
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| CDS TCA 72 bp | TTTTCCCTCTCGGCTGCTGTTACATCTGAGACATCCTaGCTCTTGAGCTCGCTTTCCTCCGCCGCGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSLSAAVTSETS*LLSSLSSAAAS Trigger: AGAAGCCGCGGCGGAGGAAAGCGAGCTCAAGAGTCAGGATGTCTCAGATGTAACAGCAGCCGAGAGGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025057.5 ENSMUST00000114848.8 |
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| CDS TCA 72 bp | CTTGGGAGCTCCACACTGAACAGAGCTCTGTTCTTCTaGTCCTTTCTCTACTGGATCACGAGATCTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGSSTLNRALFF*SFLYWITRSFP Trigger: TGGGAAAGATCTCGTGATCCAGTAGAGAAAGGATCAGAAGAACAGAGCTCTGTTCAGTGTGGAGCTCCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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| CDS TCA 72 bp | ACAGTCCCTTCCATGTGTGTCTTGGGAGCTCCACACTaGACAGAGCTCTGTTCTTCTGATCCTTTCTCTACT | + |
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Preference number: 6 (lower is better) Translates to: TVPSMCVLGAPH*TELCSSDPFST Trigger: AGTAGAGAAAGGATCAGAAGAACAGAGCTCTGTTCAGTGTGGAGCTCCCAAGACACACATGGAAGGGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233439.2 |
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