Pregenerated sensors for TAF10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043866Ensembl transcript IDs: ENSMUST00000141116.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCCCTTaGACTGGGCCTGCCGAGAAGGCCGCTCTGCGGTGGTTGAAATGC | + |
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Preference number: 1 (lower is better) Translates to: CLCPFLKGMIMASPP*TGPAEKAALRWLKC Trigger: GCATTTCAACCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 90 bp | GTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCCCTTGCACTaGGCCTGCCGAGAAGGCCGCTCTGCGGTGGTTGAAATGCTGATC | + |
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Preference number: 1 (lower is better) Translates to: VPFSQRDDHGFSPLH*ACREGRSAVVEMLI Trigger: GATCAGCATTTCAACCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR GCA 90 bp | ATGACTGCCCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTaGCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCCCCTGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: MTARISMADVKFSFQ*PGRMYAPAWVAPEG Trigger: ACCTTCAGGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTGGAAAGAAAACTTAACATCAGCCATGCTGATTCGGGCAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR GCA 90 bp | TTTTCTCAAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTaGCGAGAAGGCCGCTCTGCGGTGGTTGAAATGCTGATCATGCGT | + |
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Preference number: 1 (lower is better) Translates to: FSQRDDHGFSPLHWA*REGRSAVVEMLIMR Trigger: ACGCATGATCAGCATTTCAACCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 90 bp | ACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGGTGCTTCTGTaGGAACTGGTGACACGAGAGGTGCCCTTTGCTGACCTCTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: TNRRSADMWSFAVLL*ELVTREVPFADLSN Trigger: ATTAGAGAGGTCAGCAAAGGGCACCTCTCGTGTCACCAGTTCCCACAGAAGCACCGCGAAACTCCACATGTCTGCTGAGCGTCTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 90 bp | GCAGTGAATGAGCACGGCAATGTGCCACTTCACTATGCATGTTTCTaGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: AVNEHGNVPLHYACF*GQDQVAEVSTQTPS Trigger: ACTTGGGGTCTGAGTACTTACCTCTGCCACCTGGTCTTGGCCCCAGAAACATGCATAGTGAAGTGGCACATTGCCGTGCTCATTCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 90 bp | GCCATGGGGCGCAGCTGTTGCAATACAAGGCTGACATCAATGCAGTaGATGAGCACGGCAATGTGCCACTTCACTATGCATGTTTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: AMGRSCCNTRLTSMQ*MSTAMCHFTMHVSG Trigger: CCCAGAAACATGCATAGTGAAGTGGCACATTGCCGTGCTCATTCACTGCATTGATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 90 bp | CCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATaGGAAGCAAACCGAGCACGGAACCATCAATCCATTCTGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PGGRGKYSDPKSYDE*EANRARNHQSILSA Trigger: GGCTGACAGAATGGATTGATGGTTCCGTGCTCGGTTTGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 90 bp | CCTATCCTCTGTCCTTCAGCTTTGGAAAGGCCGCTGGCAGGGCAATaGTATTGTTGTGAAGGTGCTGAAGGTTCGAGACTGGAGTACAAG | + |
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Preference number: 1 (lower is better) Translates to: PILCPSALERPLAGQ*YCCEGAEGSRLEYK Trigger: CTTGTACTCCAGTCTCGAACCTTCAGCACCTTCACAACAATATCATTGCCCTGCCAGCGGCCTTTCCAAAGCTGAAGGACAGAGGATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR GCA 90 bp | GCCTATCTTGGAGAAGATGCAGGACAAGTAGGACCTTCAGGTCCTTaGCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACT | + |
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Preference number: 1 (lower is better) Translates to: AYLGEDAGQVGPSGP*PNSRSVKTWLGEYT Trigger: AGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCTGAAGGTCCTACTTGTCCTGCATCTTCTCCAAGATAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR GCA 90 bp | CTTCCTGTTAGATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTaGTTTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGA | + |
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Preference number: 1 (lower is better) Translates to: LPVRFRCGPEPSCKV*FGHGKRHGFSSHTR Trigger: TCTAGTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTGGTCCACAACGAAATCTAACAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 90 bp | GAAGCTGGGTACATTACCTGCTCATATTTTCAGGAAATGGGACCCTaGACAAACACTCCGGTATTGACTTCAAACAGCTCAACTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: EAGYITCSYFQEMGP*TNTPVLTSNSSTFW Trigger: CCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTTGTTCAGGGTCCCATTTCCTGAAAATATGAGCAGGTAATGTACCCAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 90 bp | AGAAAACAACGCAAACAAAGGATTATAGGTGTGGCTAAAGACGTATaGACTGAAGATAAAGCATGTGTCAAGTATACAAGGTCCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: RKQRKQRIIGVAKDV*TEDKACVKYTRSWV Trigger: TACCCAGGACCTTGTATACTTGACACATGCTTTATCTTCAGTTCATACGTCTTTAGCCACACCTATAATCCTTTGTTTGCGTTGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTCCCTGGGCGCATGTATaGGCCTGCCTGGGTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: KGMIMASPPCTGPAEKAAPWAHV*ACLGGP Trigger: GGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGG...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 90 bp | CTGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCCCTaGCACTGGGCCTGCCGAGAAGGCCGCTCTGCGGTGGTTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: LSVPFSQRDDHGFSP*HWACREGRSAVVEM Trigger: CATTTCAACCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTATGGGACTTGTTCCCTaGTCCCATCCCTACCACTGT | + |
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Preference number: 2 (lower is better) Translates to: KGMIMASPPCTGPAEKAAMGLVP*SHPYHC Trigger: ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCAT...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTTTTCTTTTCAGGACCTaGTGGCTAACGGGGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: KGMIMASPPCTGPAEKAAFLFRT*WLTGLL Trigger: CAAGAGCCCCGTTAGCCACCAGGTCCTGAAAAGAAA...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACATTCTTTCCAGTGCCCTaGGCGCATGTATGCGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VQGKAGTSMRNVPGSGGTFFPVP*AHVCAC Trigger: GCAGGCGCATACATGCGCCCAGGGCACTGGAAAGAA...TGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTTTTCCTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTGACCCAAGTTTGACATaGTTGTGCCTATCTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KGMIMASPPCTGPAEKAADPSLT*LCLSWR Trigger: TCTCCAAGATAGGCACAATCATGTCAAACTTGGGTC...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCACATCTCTCTCACACACACTATGAAGCCAGTAATAGGCACTGTCATGTGCGTGAGTCACTACTGTaGGCAGGGGAGGGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HPHLSHTHYEASNRHCHVRESLL*AGEGLQ Trigger: CTGCAGCCCCTCCCCTGCCCACAGTAGTGACTCACG...CACATGACAGTGCCTATTACTGGCTTCATAGTGTGTGTGAGAGAGATGTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | GTACAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACCTGCAGAAGAAGCCTaGAGACACAAACAGACGCTC | + |
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Preference number: 2 (lower is better) Translates to: VQGKAGTSMRNVPGSGGTPAEEA*RHKQTL Trigger: GAGCGTCTGTTTGTGTCTTCAGGCTTCTTCTGCAGG...TGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTTTTCCTTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTTCATCACACACTGGATaGCATATGGATCTCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: KGMIMASPPCTGPAEKAASSHTG*HMDLST Trigger: TGTAGAGAGATCCATATGGCATCCAGTGTGTGATGA...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGGGGCAGGGGAGGGGCTaGAGCACAAGATTCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: AEKMGQNLNRIPYKDTFWGQGRG*STRFLG Trigger: GCCCAAGAATCTTGTGCTGCAGCCCCTCCCCTGCCC...CCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATTTTCTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGCTTACTGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCTTCTGTGGGAACTGGTaGCACGAGAGGTGCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: TPAYCLCPFLKGMIMASPFCGNW*HERCPL Trigger: CAAAGGGCACCTCTCGTGTCACCAGTTCCCACAGAA...GGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAGTAAGCTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGCTTACTGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCAAGCAGGGACTTCAATaGGGAATGTCCCCGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TPAYCLCPFLKGMIMASPKQGLQ*GMSPAQ Trigger: CTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTT...GGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAGTAAGCTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGCTTCTCCGAGGTTCATTACCTACCCCTAGTTTGTCTCTTGCCCCACCTGGACCTTCAGGTCCTTaGCCAAACTCCAGAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RELLRGSLPTPSLSLAPPGPSGP*PNSRSV Trigger: GACACTTCTGGAGTTTGGGCAAGGACCTGAAGGTCC...AGGTGGGGCAAGAGACAAACTAGGGGTAGGTAATGAACCTCGGAGAAGCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCGCTCCCAGTGCTAGGTaGTTGCCAGGCTCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VCGIIRPISNEKHVCHCTAPSAR*LPGSPS Trigger: GCTGGGGGAGCCTGGCAAGCACCTAGCACTGGGAGC...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTGCTGGGTACATTACCTaGTCATATTTTCAGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: KGMIMASPPCTGPAEKAAAGYIT*SYFQEM Trigger: CATTTCCTGAAAATATGAGCAGGTAATGTACCCAGC...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCATTTGCAGGTGGCACTaGAAGGCCTTCGGCCTACCA | + |
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Preference number: 2 (lower is better) Translates to: LDMARGMAFLHTLEPLIPICRWH*KAFGLP Trigger: TGGTAGGCCGAAGGCCTTCCAGTGCCACCTGCAAAT...GGGTATGAGAGGCTCTAGTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCTTCGCGGTGCTTCTGTaGGAACTGGTGACACGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LDMARGMAFLHTLEPLIPFAVLL*ELVTRE Trigger: CTCTCGTGTCACCAGTTCCCACAGAAGCACCGCGAA...GGGTATGAGAGGCTCTAGTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGCTTCTCCGAGGTTCATTACCTACCCCTAGTTTGTCTCTTGCCCCACCTAAGTTTTCTTTCCAGTaGCCTGGGCGCATGTATGCG | + |
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Preference number: 2 (lower is better) Translates to: RELLRGSLPTPSLSLAPPKFSFQ*PGRMYA Trigger: CGCATACATGCGCCCAGGGCACTGGAAAGAAAACTT...AGGTGGGGCAAGAGACAAACTAGGGGTAGGTAATGAACCTCGGAGAAGCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTTCTTGGCCATGGGGCGCAGCTGTTGCAATACAAGGCTGACATCAATGCGCTCAGCAGACATGTaGAGTTTCGCGGTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLFLAMGRSCCNTRLTSMRSADM*SFAVLL Trigger: CAGAAGCACCGCGAAACTCCACATGTCTGCTGAGCG...CATTGATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATGGCCAAGAAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGATGCGCCTGCCTGGGTaGCCCCTGAAGGTAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: AEKMGQNLNRIPYKDTFWMRLPG*PLKVGK Trigger: TTTACCTACCTTCAGGGGCCACCCAGGCAGGCGCAT...CCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATTTTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCATACAAGGACACATTCTaGAAGGGGACCACTCGCACA | + |
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Preference number: 2 (lower is better) Translates to: PGGRGKYSDPKSYDEWEAYKDTF*KGTTRT Trigger: TGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTA...TGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCTTGTCACTTGCCACATaGTGTCTCCCAACATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LDMARGMAFLHTLEPLIPLSLAT*CLPTWE Trigger: CTCCCATGTTGGGAGACATCATGTGGCAAGTGACAA...GGGTATGAGAGGCTCTAGTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGCTTCTCCGAGGTTCATTACCTACCCCTAGTTTGTCTCTTGCCCCACCTGAAGATTTGCATGAATaGAGACCCTGCAAAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: RELLRGSLPTPSLSLAPPEDLHE*RPCKAT Trigger: GGTCGCTTTGCAGGGTCTTCATTCATGCAAATCTTC...AGGTGGGGCAAGAGACAAACTAGGGGTAGGTAATGAACCTCGGAGAAGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACTATCTTGGAGAAGATaGAGGACAAGTAGGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: VQGKAGTSMRNVPGSGGTLSWRR*RTSRTF Trigger: GAAGGTCCTACTTGTCCTGCATCTTCTCCAAGATAG...TGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTTTTCCTTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACTTGTAATTTGCAGGTaGCACTGGAAGGCCTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: AASHGHRDIVQKVHANPSLVICR*HWKAFG Trigger: GCCGAAGGCCTTCCAGTGCCACCTGCAAATTACAAG...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACCGAAAAGCCCTTTGCTaGCCTAGAATAGGACCCACC | + |
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Preference number: 2 (lower is better) Translates to: QLVMDTVTLYRRYMQTLHRKALC*PRIGPT Trigger: GGTGGGTCCTATTCTAGGCCAGCAAAGGGCTTTTCG...GTGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGCTTACTGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCGGTGGGACACTGAATTaGAAGCTGTTGTGTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TPAYCLCPFLKGMIMASPGGTLN*KLLCPR Trigger: CCTTGGACACAACAGCTTCCAATTCAGTGTCCCACC...GGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAGTAAGCTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGTGTCCCCGGCTCAGGTaGGACACTGAATTGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: AEKMGQNLNRIPYKDTFWCPRLR*DTELEA Trigger: AGCTTCCAATTCAGTGTCCCACCTGAGCCGGGGACA...CCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATTTTCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | GTACAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACAGAAGGAGACCCTAAATaGATGATTCTTGCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VQGKAGTSMRNVPGSGGTEGDPK*MILASC Trigger: ACAGGAAGCAAGAATCATTCATTTAGGGTCTCCTTC...TGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTTTTCCTTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACCTGACATCAATGCAGTaGATGAGCACGGCAATGTGC | + |
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Preference number: 2 (lower is better) Translates to: QLVMDTVTLYRRYMQTLHLTSMQ*MSTAMC Trigger: GCACATTGCCGTGCTCATTCACTGCATTGATGTCAG...GTGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCATTATTCCTTGTAATTTaGAGGTGGCACTGGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGGRGKYSDPKSYDEWEALFLVI*RWHWKA Trigger: GGCCTTCCAGTGCCACCTGCAAATTACAAGGAATAA...TGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCTCTCTTGCCCCACCTTaGATCTCCTCCCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: VCGIIRPISNEKHVCHCTSLAPP*ISSLHS Trigger: GCTGTGGAGGGAGGAGATGCAAGGTGGGGCAAGAGA...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | AATTATGTACTGCATCTGTGTTCATGCTTGTTTGTGACTGGCCCCCTGAACAATTCTGTCCTTCAGCTTTaGAAAGGCCGCTGGCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: NYVLHLCSCLFVTGPLNNSVLQL*KGRWQG Trigger: GCCCTGCCAGCGGCCTTTCCAAAGCTGAAGGACAGA...ATTGTTCAGGGGGCCAGTCACAAACAAGCATGAACACAGATGCAGTACATAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGCTTCTCCGAGGTTCATTACCTACCCCTAGTTTGTCTCTTGCCCCACCTAGTAGTACTGAAAAGTaGGATTCTGTTGGGTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RELLRGSLPTPSLSLAPPSSTEK*DSVGSH Trigger: GTGAGACCCAACAGAATCTCACTTTTCAGTACTACT...AGGTGGGGCAAGAGACAAACTAGGGGTAGGTAATGAACCTCGGAGAAGCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCAGTCTCTCACAGGGACTaGCTGACTGCCTTTTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AASHGHRDIVQKVHANPSVSHRD*LTAFFF Trigger: AAAGAAAAAGGCAGTCAGTCAGTCCCTGTGAGAGAC...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACCAGGGACTGACTGACTaGCTTTTTCTTTTCTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QLVMDTVTLYRRYMQTLHQGLTD*LFLFLA Trigger: GGCCAAGAAAAGAAAAAGGCAGTCAGTCAGTCCCTG...GTGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTTCTTGGCCATGGGGCGCAGCTGTTGCAATACAAGGCTGACATCAATGACCACAGTTCACTTCTaGTCCGAAAAGCCCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLFLAMGRSCCNTRLTSMTTVHF*SEKPFA Trigger: AGCAAAGGGCTTTTCGGACCAGAAGTGAACTGTGGT...CATTGATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATGGCCAAGAAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCAGCAGCACAAGATTCTTaGGCTACTGGGGTCATGTTA | + |
|
Preference number: 2 (lower is better) Translates to: AASHGHRDIVQKVHANPSAAQDS*ATGVML Trigger: TAACATGACCCCAGTAGCCCAAGAATCTTGTGCTGC...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCCACATCTCTCTCACACACACTATGAAGCCAGTAATAGGCACTGTCATGTGTCTTCCTCAGATCGATaGAGATATGACTGCCCGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HPHLSHTHYEASNRHCHVSSSDR*RYDCPN Trigger: ATTCGGGCAGTCATATCTTCATCGATCTGAGGAAGA...CACATGACAGTGCCTATTACTGGCTTCATAGTGTGTGTGAGAGAGATGTGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCCAGCTTACTGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCAGAAACAGTACAGCCTaGGATAATGCTTCCTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: TPAYCLCPFLKGMIMASPRNSTA*DNASYP Trigger: AGGATAGGAAGCATTATCTCAGGCTGTACTGTTTCT...GGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAGTAAGCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGCAGAGCTTTGTCACTTaGCACATGATGTCTCCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: AEKMGQNLNRIPYKDTFWQSFVT*HMMSPN Trigger: GTTGGGAGACATCATGTGGCAAGTGACAAAGCTCTG...CCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATTTTCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCCACATCTCTCTCACACACACTATGAAGCCAGTAATAGGCACTGTCATGTGAGTTTGCTTTGGACATaGCAAGAGGCATGGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HPHLSHTHYEASNRHCHVSLLWT*QEAWLF Trigger: GAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACT...CACATGACAGTGCCTATTACTGGCTTCATAGTGTGTGTGAGAGAGATGTGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTTCTTGGCCATGGGGCGCAGCTGTTGCAATACAAGGCTGACATCAATGAGATTCTTGGGCTACTaGGGTCATGTTAAGGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLFLAMGRSCCNTRLTSMRFLGY*GHVKVK Trigger: CTTCACCTTAACATGACCCCAGTAGCCCAAGAATCT...CATTGATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATGGCCAAGAAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCAGCTTACTGTCTGTGCCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCGGTAAAGGCATCGTATaGGAAATTGAAAAGAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: TPAYCLCPFLKGMIMASPGKGIV*EIEKNQ Trigger: CTGGTTCTTTTCAATTTCCCATACGATGCCTTTACC...GGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAGTAAGCTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACGTCTTTCTTTCTTTATaGCTGGACACAAGTCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QLVMDTVTLYRRYMQTLHVFLSL*LDTSLS Trigger: TGAGAGACTTGTGTCCAGGCATAAAGAAAGAAAGAC...GTGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCAACACTGGATGCCATATaGATCTCTCTACAATGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AASHGHRDIVQKVHANPSTLDAI*ISLQCS Trigger: AGAACATTGTAGAGAGATCCATATGGCATCCAGTGT...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACATATTTTCAGGAAATaGGACCCTGAACAAACACTC | + |
|
Preference number: 2 (lower is better) Translates to: AASHGHRDIVQKVHANPSHIFRK*DPEQTL Trigger: GAGTGTTTGTTCAGGGTCCCATTTCCTGAAAATATG...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 90 bp | CAAACCGAGCACGGAACCATCAATCCATTCTGTCAGCCCTACTGTTaGACATTTACAGAATTATGTACTGCATCTGTGTTCATGCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: QTEHGTINPFCQPYC*TFTELCTASVFMLV Trigger: AACAAGCATGAACACAGATGCAGTACATAATTCTGTAAATGTCAAACAGTAGGGCTGACAGAATGGATTGATGGTTCCGTGCTCGGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCAAAGCGACCCAAGTTTaGCATGATTGTGCCTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: VCGIIRPISNEKHVCHCTKATQV*HDCAYL Trigger: AAGATAGGCACAATCATGTCAAACTTGGGTCGCTTT...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCGAGACCCTAAATGAATaGTTCTTGCTTCCTGTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: VCGIIRPISNEKHVCHCTETLNE*FLLPVR Trigger: TCTAACAGGAAGCAAGAATCATTCATTTAGGGTCTC...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR CAA 90 bp | ACAGTCAAGATAGCTCACATTAACAGATTCTTACAATCCAGTCAGTaGAACTCTACAGTAAGGAGAAAACAACGCAAACAAAGGATTATA | + |
|
Preference number: 2 (lower is better) Translates to: TVKIAHINRFLQSSQ*NSTVRRKQRKQRII Trigger: TATAATCCTTTGTTTGCGTTGTTTTCTCCTTACTGTAGAGTTCAACTGACTGGATTGTAAGAATCTGTTAATGTGAGCTATCTTGACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR GCA 72 bp | AGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTaGCGAGAAGGCCGCTCTGCGGTGGTTGAAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RDDHGFSPLHWA*REGRSAVVEML Trigger: CAGCATTTCAACCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR GCA 72 bp | CCTTTTCTCAAAGGGATGATCATGGCTTCTCCCCCTTaGACTGGGCCTGCCGAGAAGGCCGCTCTGCGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PFLKGMIMASPP*TGPAEKAALRW Trigger: CCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGAAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR CCA 72 bp | TCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTaGCCCCTGAAGGTAGGTAAAGGCATCGTATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSALGACMRLPG*PLKVGKGIVWE Trigger: TTCCCATACGATGCCTTTACCTACCTTCAGGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR CCA 72 bp | TCTCAAAGGGATGATCATGGCTTCTCCCCCTTGCACTaGGCCTGCCGAGAAGGCCGCTCTGCGGTGGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQRDDHGFSPLH*ACREGRSAVVE Trigger: TTCAACCACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR CCA 72 bp | CGCTCAGCAGACATGTGGAGTTTCGCGGTGCTTCTGTaGGAACTGGTGACACGAGAGGTGCCCTTTGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSADMWSFAVLL*ELVTREVPFAD Trigger: GTCAGCAAAGGGCACCTCTCGTGTCACCAGTTCCCACAGAAGCACCGCGAAACTCCACATGTCTGCTGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTTGCAGCACAAGATTCTaGGGCTACTGGGGTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: KGMIMASPPCTGPAEKAACSTRF*GYWGHV Trigger: AACATGACCCCAGTAGCCCAAGAATCTTGTGCTGCA...AGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR GCA 72 bp | CGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTaGCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RISMADVKFSFQ*PGRMYAPAWVA Trigger: GGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTGGAAAGAAAACTTAACATCAGCCATGCTGATTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 72 bp | CAGGGGAGGGGCTGCAGCACAAGATTCTTGGGCTACTaGGGTCATGTTAAGGTGAAGCTGGGTACATTACCT | + |
|
Preference number: 3 (lower is better) Translates to: QGRGCSTRFLGY*GHVKVKLGTLP Trigger: AGGTAATGTACCCAGCTTCACCTTAACATGACCCCAGTAGCCCAAGAATCTTGTGCTGCAGCCCCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 72 bp | CCTCCCCTGTCTCTAATCATGGTACTACCCCAGTTATaGGACTTGTTCCCTGCTCCCATCCCTACCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PPLSLIMVLPQL*DLFPAPIPTTV Trigger: TACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAGAGACAGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTTTCTTGGCCATGGGGCGCAGCTGTTGCAATACAAGGCTGACATCAATGCCCCTAGTTTGTCTCTaGCCCCACCTTGCATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLFLAMGRSCCNTRLTSMPLVCL*PHLASP Trigger: AGGAGATGCAAGGTGGGGCAAGAGACAAACTAGGGG...CATTGATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATGGCCAAGAAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACATGGGGCGCAGCTGTaGCAATACAAGGCTGACATC | + |
|
Preference number: 3 (lower is better) Translates to: AASHGHRDIVQKVHANPSHGAQL*QYKADI Trigger: GATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATG...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 72 bp | GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTaGTTGCCTCCCCTGTCTCTAATCATGGTACTACCC | + |
|
Preference number: 3 (lower is better) Translates to: AGGVHFSKVKDL*LPPLSLIMVLP Trigger: GGGTAGTACCATGATTAGAGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 72 bp | ATTCTGAAGCTCACCTTATTCCTTGTAATTTGCAGGTaGCACTGGAAGGCCTTCGGCCTACCATCCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ILKLTLFLVICR*HWKAFGLPSHQ Trigger: CTGGTGGGATGGTAGGCCGAAGGCCTTCCAGTGCCACCTGCAAATTACAAGGAATAAGGTGAGCTTCAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTTTCTTGGCCATGGGGCGCAGCTGTTGCAATACAAGGCTGACATCAATGCACGAGAGGTGCCCTTaGCTGACCTCTCTAATATGG | + |
|
Preference number: 3 (lower is better) Translates to: FLFLAMGRSCCNTRLTSMHERCP*LTSLIW Trigger: CCATATTAGAGAGGTCAGCAAAGGGCACCTCTCGTG...CATTGATGTCAGCCTTGTATTGCAACAGCTGCGCCCCATGGCCAAGAAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCACATCTCTCTCACACACACTATGAAGCCAGTAATAGGCACTGTCATGTGCATCTGTGTTCATGCTaGTTTGTGACTGGCCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HPHLSHTHYEASNRHCHVHLCSC*FVTGPL Trigger: CAGGGGGCCAGTCACAAACAAGCATGAACACAGATG...CACATGACAGTGCCTATTACTGGCTTCATAGTGTGTGTGAGAGAGATGTGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR TCA 72 bp | TTTCTTTTCAGGACCTGGTGGCTAACGGGGCTCTTGTaGGCATCTGTAACAAGTATGGAGAGATGCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLFRTWWLTGLL*ASVTSMERCLW Trigger: CCACAGGCATCTCTCCATACTTGTTACAGATGCTCACAAGAGCCCCGTTAGCCACCAGGTCCTGAAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CCA 72 bp | AAGCTCACCTTATTCCTTGTAATTTGCAGGTGGCACTaGAAGGCCTTCGGCCTACCATCCCACCAGGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KLTLFLVICRWH*KAFGLPSHQVF Trigger: AAATACCTGGTGGGATGGTAGGCCGAAGGCCTTCCAGTGCCACCTGCAAATTACAAGGAATAAGGTGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATTCAGAGCTTTGTCACTaGCCACATGATGTCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RCGPEPSCKVCFGHGKRHSELCH*PHDVSQ Trigger: TTGGGAGACATCATGTGGCAAGTGACAAAGCTCTGA...ATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTGGTCCACAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACAGGTGGGACACTGAATaGGAAGCTGTTGTGTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLVMDTVTLYRRYMQTLHRWDTE*EAVVSK Trigger: CTTGGACACAACAGCTTCCAATTCAGTGTCCCACCT...GTGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR TCA 72 bp | CGCAGCTGTTGCAATACAAGGCTGACATCAATGCAGTaGATGAGCACGGCAATGTGCCACTTCACTATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RSCCNTRLTSMQ*MSTAMCHFTMH Trigger: ATGCATAGTGAAGTGGCACATTGCCGTGCTCATTCACTGCATTGATGTCAGCCTTGTATTGCAACAGCTGCG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR GCA 72 bp | AAGCTTTTGTCCTTCCCAACTCCAGCTTACTGTCTGTaGCCTTTTCTCAAAGGGATGATCATGGCTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KLLSFPTPAYCL*PFLKGMIMASP Trigger: GGGAGAAGCCATGATCATCCCTTTGAGAAAAGGGCACAGACAGTAAGCTGGAGTTGGGAAGGACAAAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCCAGAACTACAGATACTaGTTTAGGGGTGGTGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: LDMARGMAFLHTLEPLIPQNYRY*FRGGGT Trigger: AGTACCACCACCCCTAAACAAGTATCTGTAGTTCTG...GGGTATGAGAGGCTCTAGTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGTACTGCATCTGTGTTCATGCTTGTTTGTGACTGGCCCCCTGAACAATTTACCTACCCCTAGTTaGTCTCTTGCCCCACCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NYVLHLCSCLFVTGPLNNLPTPS*SLAPPC Trigger: GCAAGGTGGGGCAAGAGACAAACTAGGGGTAGGTAA...ATTGTTCAGGGGGCCAGTCACAAACAAGCATGAACACAGATGCAGTACATAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCGTTAAAGACCTCTGGTaGCCTCCCCTGTCTCTAATC | + |
|
Preference number: 3 (lower is better) Translates to: VCGIIRPISNEKHVCHCTVKDLW*PPLSLI Trigger: GATTAGAGACAGGGGAGGCAACCAGAGGTCTTTAAC...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCAACAAACACTCCGGTATaGACTTCAAACAGCTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: AASHGHRDIVQKVHANPSTNTPV*TSNSST Trigger: AGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTTGT...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR TCA 72 bp | GCACAAGATTCTTGGGCTACTGGGGTCATGTTAAGGTaGAGCTGGGTACATTACCTGCTCATATTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AQDSWATGVMLR*SWVHYLLIFSG Trigger: TCCTGAAAATATGAGCAGGTAATGTACCCAGCTTCACCTTAACATGACCCCAGTAGCCCAAGAATCTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR CCA 72 bp | CCTGGGTGGCCCCTGAAGGTAGGTAAAGGCATCGTATaGGAAATTGAAAAGAACCAGCTGAATAACAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGWPLKVGKGIV*EIEKNQLNNNR Trigger: TCTATTGTTATTCAGCTGGTTCTTTTCAATTTCCCATACGATGCCTTTACCTACCTTCAGGGGCCACCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCCTTATTCCTTGTAATTaGCAGGTGGCACTGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VCGIIRPISNEKHVCHCTLIPCN*QVALEG Trigger: GCCTTCCAGTGCCACCTGCAAATTACAAGGAATAAG...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
||
| 3UTR TCA 72 bp | TTCAGGAAATGGGACCCTGAACAAACACTCCGGTATTaGCTTCAAACAGCTCAACTTTCTGGCAAAGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FRKWDPEQTLRY*LQTAQLSGKAQ Trigger: TTGAGCTTTGCCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTTGTTCAGGGTCCCATTTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CAA 90 bp | AATTATGTACTGCATCTGTGTTCATGCTTGTTTGTGACTGGCCCCCTGAACAATATGATTGTGCCTATCTaGGAGAAGATGCAGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: NYVLHLCSCLFVTGPLNNMIVPI*EKMQDK Trigger: CTTGTCCTGCATCTTCTCCAAGATAGGCACAATCAT...ATTGTTCAGGGGGCCAGTCACAAACAAGCATGAACACAGATGCAGTACATAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCATGTCAGCCCTACTGTTaGACATTTACAGAATTATGT | + |
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Preference number: 3 (lower is better) Translates to: AASHGHRDIVQKVHANPSCQPYC*TFTELC Trigger: ACATAATTCTGTAAATGTCAAACAGTAGGGCTGACA...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 72 bp | TACATTACCTGCTCATATTTTCAGGAAATGGGACCCTaGACAAACACTCCGGTATTGACTTCAAACAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: YITCSYFQEMGP*TNTPVLTSNSS Trigger: TGAGCTGTTTGAAGTCAATACCGGAGTGTTTGTTCAGGGTCCCATTTCCTGAAAATATGAGCAGGTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 72 bp | ACACACACTATGAAGCCAGTAATAGGCACTGTCATGTaGAGAATGTGTGCTAGTCTTTCTTTCTTTATGCCT | + |
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Preference number: 3 (lower is better) Translates to: THTMKPVIGTVM*RMCASLSFFMP Trigger: AGGCATAAAGAAAGAAAGACTAGCACACATTCTTCACATGACAGTGCCTATTACTGGCTTCATAGTGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR TCA 72 bp | GTAAAGGCATCGTATGGGAAATTGAAAAGAACCAGCTaGATAACAATAGATGAGGTACAGACTAGACAGGTT | + |
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Preference number: 3 (lower is better) Translates to: VKASYGKLKRTS*ITIDEVQTRQV Trigger: AACCTGTCTAGTCTGTACCTCATCTATTGTTATTCAGCTGGTTCTTTTCAATTTCCCATACGATGCCTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 72 bp | CCCTTTTCTCAAAGGGATGATCATGGCTTCTCCCCCTaGCACTGGGCCTGCCGAGAAGGCCGCTCTGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: PFSQRDDHGFSP*HWACREGRSAV Trigger: CACCGCAGAGCGGCCTTCTCGGCAGGCCCAGTGCAAGGGGGAGAAGCCATGATCATCCCTTTGAGAAAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAGCTTCACTTCTCCGTTaGCCGCGCTCGGTAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: PGGRGKYSDPKSYDEWEAASLLR*PRSVGR Trigger: ACGCCCTACCGAGCGCGGCCAACGGAGAAGTGAAGC...TGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 72 bp | CCCTGCACCTGGCAGCTAGTCATGGACACCGTGACATaGTACAGAAGGTACATGCAAACCCTTCACCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PCTWQLVMDTVT*YRRYMQTLHHP Trigger: TGGGTGGTGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGCCAGGTGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 72 bp | CTGTCTCTAATCATGGTACTACCCCAGTTATGGGACTaGTTCCCTGCTCCCATCCCTACCACTGTAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSLIMVLPQLWD*FPAPIPTTVAP Trigger: TGGGGCTACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 72 bp | AATGAGGAATGTCCCCGGCTCAGGTGGGACACTGAATaGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: NEECPRLRWDTE*EAVVSKAPQVV Trigger: TACTACTTGGGGTGCCTTGGACACAACAGCTTCCAATTCAGTGTCCCACCTGAGCCGGGGACATTCCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAAATTATGCGTGGGTCTaGAGCTTCAAAGCCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PGGRGKYSDPKSYDEWEANYAWV*SFKASA Trigger: CGCGCTGGCTTTGAAGCTTCAGACCCACGCATAATT...TGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAGGGTCAAGTCCTCCATaGTTAGGGTGTACTTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: PGGRGKYSDPKSYDEWEAGSSPP*LGCTCD Trigger: ATCGCAAGTACACCCTAACCATGGAGGACTTGACCC...TGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGGTGCTTCCCTTCATTTTGCAGTaGTGTAGGGCATCATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: KPEDTNRRSADMWSFAVLPFILQ*CRASLA Trigger: TGCCAATGATGCCCTACAGCACTGCAAAATGAAGGG...AAGCACCGCGAAACTCCACATGTCTGCTGAGCGTCTGTTTGTGTCTTCAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGTGTACTTGCGATCCTTaGTCTTGCTCCGGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AEKMGQNLNRIPYKDTFWCTCDP*SCSGSC Trigger: GCAGCTCCCGGAGCAAGAGCAAGGATCGCAAGTACA...CCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATTTTCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTAGTCATGGACACCGTGACATTGTACAGAAGGTACATGCAAACCCTTCACCACTAGAGGTGTGCTaGACACTACGGGCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: AASHGHRDIVQKVHANPSPLEVC*TLRASL Trigger: AAGTGAAGCCCGTAGTGTCCAGCACACCTCTAGTGG...TGAAGGGTTTGCATGTACCTTCTGTACAATGTCACGGTGTCCATGACTAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR GCA 90 bp | TTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCGTAGTAACCAGTCACTaGATCTGGGATCGTAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LDMARGMAFLHTLEPLIPVVTSH*IWDRRC Trigger: ACACCTACGATCCCAGATGCAGTGACTGGTTACTAC...GGGTATGAGAGGCTCTAGTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR TCA 90 bp | TCTAATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACTGGCAATATCTGAGATaGATTTCTGGGCAGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SNHGTTPVMGLVPCSHPYWQYLR*ISGQLV Trigger: CACTAGCTGCCCAGAAATTCATCTCAGATATTGCCA...GTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CCA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCACCAGTCACTGCATCTaGGATCGTAGGTGTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: VCGIIRPISNEKHVCHCTTSHCI*DRRCVI Trigger: GATTACACACCTACGATCCCAGATGCAGTGACTGGT...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR TCA 90 bp | AATTATGTACTGCATCTGTGTTCATGCTTGTTTGTGACTGGCCCCCTGAACAATATCATTGGCAATATCTaGGATGAATTTCTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NYVLHLCSCLFVTGPLNNIIGNI*DEFLGS Trigger: GCTGCCCAGAAATTCATCTCAGATATTGCCAATGAT...ATTGTTCAGGGGGCCAGTCACAAACAAGCATGAACACAGATGCAGTACATAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| 3UTR CAA 72 bp | ATAGCTCACATTAACAGATTCTTACAATCCAGTCAGTaGAACTCTACAGTAAGGAGAAAACAACGCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: IAHINRFLQSSQ*NSTVRRKQRKQ Trigger: TTGTTTGCGTTGTTTTCTCCTTACTGTAGAGTTCAACTGACTGGATTGTAAGAATCTGTTAATGTGAGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS GCA 90 bp | CGCGGCCGTGCTAGTGGGCAGCGCAGCGGGAGCCGACACCAGGGGTaGCGGACCCGCGACCGAGGCGGCACAGGCGGTCGCCGCCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: RGRASGQRSGSRHQG*RTRDRGGTGGRRLG Trigger: CCCGAGGCGGCGACCGCCTGTGCCGCCTCGGTCGCGGGTCCGGCACCCCTGGTGTCGGCTCCCGCTGCGCTGCCCACTAGCACGGCCGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CAA 90 bp | CACCCACATCTCTCTCACACACACTATGAAGCCAGTAATAGGCACTGTCATGTGCCCGCGGGGCTGGCCTaGCTCTCCGCGGCCGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: HPHLSHTHYEASNRHCHVPAGLA*LSAAVL Trigger: TAGCACGGCCGCGGAGAGCAAGGCCAGCCCCGCGGG...CACATGACAGTGCCTATTACTGGCTTCATAGTGTGTGTGAGAGAGATGTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CAA 90 bp | TCTAATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACGGCTTCACTTCTCCGTaGGCCGCGCTCGGTAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: SNHGTTPVMGLVPCSHPYGFTSP*AALGRA Trigger: CGCCCTACCGAGCGCGGCCAACGGAGAAGTGAAGCC...GTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS CCA 90 bp | GTGTGTAATCCTCCAACTGCATCAAGAAGTCCACTAGAGGTGTGCTaGACACTACGGGCTTCACTTCTCCGTTGGCCGCGCTCGGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: VCNPPTASRSPLEVC*TLRASLLRWPRSVG Trigger: CCCTACCGAGCGCGGCCAACGGAGAAGTGAAGCCCGTAGTGTCCAGCACACCTCTAGTGGACTTCTTGATGCAGTTGGAGGATTACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CAA 90 bp | CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTTTGCGATCCTTGCTCTaGCTCCGGGAGCTGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PKLQKCQNMAGGVHFSKVLRSLL*LRELPE Trigger: CTCTGGCAGCTCCCGGAGCAAGAGCAAGGATCGCAA...AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS-3UTR CAA 90 bp | GTTTGTGGGATTATCCGCCCCATCAGTAATGAAAAGCATGTTTGTCATTGTACCGTGTACTTGCGATCCTaGCTCTTGCTCCGGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: VCGIIRPISNEKHVCHCTVYLRS*LLLREL Trigger: CAGCTCCCGGAGCAAGAGCAAGGATCGCAAGTACAC...GGTACAATGACAAACATGCTTTTCATTACTGATGGGGCGGATAATCCCACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS GCA 72 bp | GCTAGTGGGCAGCGCAGCGGGAGCCGACACCAGGGGTaGCGGACCCGCGACCGAGGCGGCACAGGCGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: ASGQRSGSRHQG*RTRDRGGTGGR Trigger: GCGACCGCCTGTGCCGCCTCGGTCGCGGGTCCGGCACCCCTGGTGTCGGCTCCCGCTGCGCTGCCCACTAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS CCA 72 bp | CCTCCAACTGCATCAAGAAGTCCACTAGAGGTGTGCTaGACACTACGGGCTTCACTTCTCCGTTGGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PPTASRSPLEVC*TLRASLLRWPR Trigger: GCGCGGCCAACGGAGAAGTGAAGCCCGTAGTGTCCAGCACACCTCTAGTGGACTTCTTGATGCAGTTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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| CDS GCA 72 bp | AATCCTCCAACTGCATCAAGAAGTCCACTAGAGGTGTaGTGGACACTACGGGCTTCACTTCTCCGTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: NPPTASRSPLEV*WTLRASLLRWP Trigger: CGGCCAACGGAGAAGTGAAGCCCGTAGTGTCCAGCACACCTCTAGTGGACTTCTTGATGCAGTTGGAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141116.2 |
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