Pregenerated sensors for TAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031314Ensembl transcript IDs: ENSMUST00000101341.9, ENSMUST00000118878.8, ENSMUST00000143908.8, ENSMUST00000149274.9
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGTTTCTCTGTCCTGGAATGTGCTCTGTAGACCAGGCTGGCCTTaGACTCAGAGATGTGCCTTGGCCATCACACCCAGCTGTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: WVSLSWNVLCRPGWP*TQRCALAITPSCLK Trigger: TTTAAGACAGCTGGGTGTGATGGCCAAGGCACATCTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGCACATTCCAGGACAGAGAAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTCCTGGCTTAGTACGCTaGGCCCAGAGCGCTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PSSNAKLLKICFLSVFQCPGLVR*AQSAAL Trigger: AAGAGCAGCGCTCTGGGCCCAGCGTACTAAGCCAGG...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTTCGTCCTCTGAGAGGTaGACCTGGCTTAGTACGCTG | + |
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Preference number: 2 (lower is better) Translates to: LHSHPSEAITANTLMYILSSSER*TWLSTL Trigger: CAGCGTACTAAGCCAGGTCCACCTCTCAGAGGACGA...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | CATTCATCAGAGTCCAAATCAGTGTCTCCGGCAATGGAGTGGAAATCCTCACTGTCCTTCCTCTTCATCTaGAAGATCACCATCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: HSSESKSVSPAMEWKSSLSFLFI*KITISI Trigger: GATGGAGATGGTGATCTTGCAGATGAAGAGGAAGGA...CAGTGAGGATTTCCACTCCATTGCCGGAGACACTGATTTGGACTCTGATGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTAGGCATGTGCCACCATaGCTAGCTCAAATGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LHSHPSEAITANTLMYILRHVPP*LAQMQS Trigger: GCTTTGCATTTGAGCTAGGCATGGTGGCACATGCCT...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTTGTAATGAGGAAGAGTaGGTCTGCTCTCTCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PSSNAKLLKICFLSVFQCCNEEE*VCSLLL Trigger: CAAAAGGAGAGAGCAGACTCACTCTTCCTCATTACA...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACAGAATTCCAGTCTCACTaGCCCAACTTGATGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SILFLKQGRYKQGTHSVTEFQSH*PNLMAS Trigger: GCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACAAGGCATGTGCCACCATaGCTAGCTCAAATGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SILFLKQGRYKQGTHSVTRHVPP*LAQMQS Trigger: GCTTTGCATTTGAGCTAGGCATGGTGGCACATGCCT...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACACCTCATACAAGACACTaGCTTGGGGCTGTTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: SILFLKQGRYKQGTHSVTPHTRH*LGAVVQ Trigger: CTGTACAACAGCCCCAAGCCAGTGTCTTGTATGAGG...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACTCTGAGAGGTGGACCTaGCTTAGTACGCTGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: MNQAHSNIICWDSVIFKNSERWT*LSTLGP Trigger: TGGGCCCAGCGTACTAAGCCAGGTCCACCTCTCAGA...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCTCTCCGGCAATGGAGTaGAAATCCTCACTGTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VPVCQLESKMVACLYNKSSPAME*KSSLSS Trigger: GGAGGACAGTGAGGATTTCCACTCCATTGCCGGAGA...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTCCAGCATCCTTTTTCTaGAACAAGGCAGGTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: LHSHPSEAITANTLMYILPASFF*NKAGTN Trigger: GTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGG...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACATAGCTCCCATAACTaGTGTTGCTATCCTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: VMSSHSSILFLKQGRYKQHSSHN*CCYPPN Trigger: GTTTGGAGGATAGCAACATCAGTTATGGGAGCTATG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAAAGCTCTTGAAGATATaGTTCCTGTCCGTCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EFQSHCPNLMASSYLTFAKLLKI*FLSVFQ Trigger: CTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTT...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACATCGAACTCAGAAATCTaGCTGCCTCTGTCTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SILFLKQGRYKQGTHSVTSNSEI*LPLSLK Trigger: CTTGAGAGACAGAGGCAGGCAGATTTCTGAGTTCGA...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTACTTATGTAATGAGGAAGAGTaGGTCTGCTCTCTCCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: IPMAPLNFRFHLLSLDYLCNEEE*VCSLLL Trigger: CAAAAGGAGAGAGCAGACTCACTCTTCCTCATTACA...TAAGTAGTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTAAGAGGACATTTACATaGCCACCTATCATTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSSNAKLLKICFLSVFQCKRTFT*PPIIQR Trigger: TCTCTGAATGATAGGTGGTCATGTAAATGTCCTCTT...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCAAGCTCTTGAAGATATaGTTCCTGTCCGTCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSILFLKQGRYKQGTHSVKLLKI*FLSVFQ Trigger: CTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTT...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCTGTAATGAGGAAGAGTaGGTCTGCTCTCTCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VPVCQLESKMVACLYNKSCNEEE*VCSLLL Trigger: CAAAAGGAGAGAGCAGACTCACTCTTCCTCATTACA...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACCACTTTCACTTAGCTaGATAGCAAAGAAAGGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VMSSHSSILFLKQGRYKQPLSLS*IAKKGL Trigger: TAACCCTTTCTTTGCTATTCAGCTAAGTGAAAGTGG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCTCCTTTGTTCCAGTCTaGCAATTAGAAAGTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: PSFSVMSSHSSILFLKQGSFVPV*QLESKM Trigger: CATTTTACTTTCTAATTGGCAGACTGGAACAAAGGA...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTAGAATTCCAGTCTCACTaGCCCAACTTGATGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SEIYSYIPVIYLATRHCLEFQSH*PNLMAS Trigger: GCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCGCCTCTAGAAAACTCTaGTTTTCCACACATGATTCT | + |
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Preference number: 2 (lower is better) Translates to: SSILFLKQGRYKQGTHSVASRKL*FSTHDS Trigger: AGAATCATGTGTGGAAAAGCAGAGTTTTCTAGAGGC...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCTCCTTTGTTCCAGTCTaGCAATTAGAAAGTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SSILFLKQGRYKQGTHSVSFVPV*QLESKM Trigger: CATTTTACTTTCTAATTGGCAGACTGGAACAAAGGA...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGAAGAGGACATTTACATaGCCACCTATCATTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VKWWHVYTTRAINAIKGVKRTFT*PPIIQR Trigger: TCTCTGAATGATAGGTGGTCATGTAAATGTCCTCTT...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACTCCTTTGTTCCAGTCTaGCAATTAGAAAGTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: MNQAHSNIICWDSVIFKNSFVPV*QLESKM Trigger: CATTTTACTTTCTAATTGGCAGACTGGAACAAAGGA...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTaGCTCTGTCTCTCAAGTGCTGGGATTAAAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLSSAGIKGM Trigger: CATGCCTTTAATCCCAGCACTTGAGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR CCA 72 bp | CTCATTCATCAGAGTCCAAATCAGTGTCTCCGGCAATaGAGTGGAAATCCTCACTGTCCTCCTCGTCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LIHQSPNQCLRQ*SGNPHCPPRPL Trigger: CAGAGGACGAGGAGGACAGTGAGGATTTCCACTCCATTGCCGGAGACACTGATTTGGACTCTGATGAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR CCA 72 bp | GTAGACCAGGCTGGCCTTGAACTCAGAGATGTGCCTTaGCCATCACACCCAGCTGTCTTAAACTGCTTTATA | + |
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Preference number: 3 (lower is better) Translates to: VDQAGLELRDVP*PSHPAVLNCFI Trigger: TATAAAGCAGTTTAAGACAGCTGGGTGTGATGGCCAAGGCACATCTCTGAGTTCAAGGCCAGCCTGGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
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| 3UTR-3UTR CAA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCACTGGCTTGGGGCTGTaGTACAGTTCCTTCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PSFSVMSSHSSILFLKQGTGLGL*YSSFLF Trigger: GAAGAGGAAGGAACTGTACAACAGCCCCAAGCCAGT...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| 3UTR TCA 72 bp | CATGTGCCACCATGCCTAGCTCAAATGCAAAGCTCTTaGAGATATGCTTCCTGTCCGTCTTTCAGTGTCATG | + |
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Preference number: 3 (lower is better) Translates to: HVPPCLAQMQSS*RYASCPSFSVM Trigger: CATGACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGGCATGGTGGCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCTCTCACTGCCCCAACTaGATGGCAAGCTCTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: PSFSVMSSHSSILFLKQGSHCPN*MASSYL Trigger: TAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGA...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| 3UTR-3UTR CAA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAATCTCACTGCCCCAACTaGATGGCAAGCTCTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: VMSSHSSILFLKQGRYKQSHCPN*MASSYL Trigger: TAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGA...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCACCGCCACCCTTGTCCTaGAGCAGCCCAGCCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAPPPLS*SSPAHP Trigger: GGGGTGGGCTGGGCTGCTGCAGGACAAGGGTGGCGG...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCCCGCCACCCTTGTCCTaGAGCAGCCCAGCCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVPPPLS*SSPAHP Trigger: GGGGTGGGCTGGGCTGCTGCAGGACAAGGGTGGCGG...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR GCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAACCGCCACCCTTGTCCTaGAGCAGCCCAGCCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQPPPLS*SSPAHP Trigger: GGGGTGGGCTGGGCTGCTGCAGGACAAGGGTGGCGG...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR GCA 90 bp | CCCTTCATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACAGTTCCTTCCGTTCCTaGTCCTCCCGCTCCCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PFIPMAPLNFRFHLLSLDSSFRS*SSRSRD Trigger: GTCTCGGGAGCGGGAGGAGCAGGAACGGAAGGAACT...GTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
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| CDS-3UTR GCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAAGTTCCTTCCGTTCCTaGTCCTCCCGCTCCCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQSSFRS*SSRSRD Trigger: GTCTCGGGAGCGGGAGGAGCAGGAACGGAAGGAACT...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR GCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAAGTTCCTTCCGTTCCTaGTCCTCCCGCTCCCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQSSFRS*SSRSRD Trigger: GTCTCGGGAGCGGGAGGAGCAGGAACGGAAGGAACT...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACCTGGCTTAGTACGCTaGGCCCAGAGCGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQPGLVR*AQSAAL Trigger: AAGAGCAGCGCTCTGGGCCCAGCGTACTAAGCCAGG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
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| CDS-3UTR TCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTTGCTTCAGCAAAGGCTaGACTGAGTGTGGACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCCFSKG*TECGPG Trigger: GCCAGGTCCACACTCAGTTCAGCCTTTGCTGAAGCA...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CCA 90 bp | CATTCATCAGAGTCCAAATCAGTGTCTCCGGCAATGGAGTGGAAATCCTCACTGTCATCAGAGAGACACTaGTCTGGAAGTGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: HSSESKSVSPAMEWKSSLSSERH*SGSGGG Trigger: TCCTCCTCCACTTCCAGACCAGTGTCTCTCTGATGA...CAGTGAGGATTTCCACTCCATTGCCGGAGACACTGATTTGGACTCTGATGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
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| CDS-3UTR CCA 90 bp | CATTCATCAGAGTCCAAATCAGTGTCTCCGGCAATGGAGTGGAAATCCTCACTGTCCGGCGCCGGTGGATaGATTTATGAGGTCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSESKSVSPAMEWKSSLSGAGG*IYEVYS Trigger: TGAATAGACCTCATAAATCCATCCACCGGCGCCGGA...CAGTGAGGATTTCCACTCCATTGCCGGAGACACTGATTTGGACTCTGATGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAATCTGAGAGGTGGACCTaGCTTAGTACGCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQSERWT*LSTLGP Trigger: TGGGCCCAGCGTACTAAGCCAGGTCCACCTCTCAGA...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCTCTGAGAGGTGGACCTaGCTTAGTACGCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVSERWT*LSTLGP Trigger: TGGGCCCAGCGTACTAAGCCAGGTCCACCTCTCAGA...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAATGCTTCAGCAAAGGCTaGACTGAGTGTGGACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQCFSKG*TECGPG Trigger: GCCAGGTCCACACTCAGTTCAGCCTTTGCTGAAGCA...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTGAGCACTCCTCTTCCTaGACCTGCCCTTCCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCEHSSS*TCPSCI Trigger: TATACAGGAAGGGCAGGTCCAGGAAGAGGAGTGCTC...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTTCATCCAATGTAGTGTaGAGTGAGCCTGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILSSNVV*SEPEGW Trigger: CCAGCCCTCAGGCTCACTTCACACTACATTGGATGA...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCAGTAACTGGCCAGGATaGAGAGAACCCAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVSNWPG*REPRKG Trigger: GCCTTTCCTGGGTTCTCTTCATCCTGGCCAGTTACT...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAAGTAACTGGCCAGGATaGAGAGAACCCAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQSNWPG*REPRKG Trigger: GCCTTTCCTGGGTTCTCTTCATCCTGGCCAGTTACT...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCATACAAATCAGGAGGCTaGGGTGTATATGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAYKSGG*GVYGPG Trigger: TCCAGGGCCATATACACCTCAGCCTCCTGATTTGTA...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACATCTTCTTCCTCCTCTaGTACCTCATACCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFIPMAPLNFRFHLLSLDIFFLL*YLIPTD Trigger: ATCGGTGGGTATGAGGTATCAGAGGAGGAAGAAGAT...GTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR GCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTCCGCAAGATGCTTCTTaGACTCGTCATCCAAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILPQDAS*TRHPRR Trigger: GCGTCTTGGATGACGAGTGCAAGAAGCATCTTGCGG...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACCGCAAGATGCTTCTTaGACTCGTCATCCAAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQPQDAS*TRHPRR Trigger: GCGTCTTGGATGACGAGTGCAAGAAGCATCTTGCGG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTCCTCTGATACCTCATACCCACCGATGCTGCTGAAGCTGGTATCCTGGTCAAATAAGGGACACTaGTGGCCAACAACAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSDTSYPPMLLKLVSWSNKGH*WPTTKI Trigger: TATTTTTGTTGTTGGCCAGCAGTGTCCCTTATTTGA...CCAGGATACCAGCTTCAGCAGCATCGGTGGGTATGAGGTATCAGAGGAGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
||
| 3UTR CAA 72 bp | GCATGTGCCACCATGCCTAGCTCAAATGCAAAGCTCTaGAAGATATGCTTCCTGTCCGTCTTTCAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACATMPSSNAKL*KICFLSVFQCH Trigger: ATGACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGGCATGGTGGCACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAATCTGTGTCTCCAGTTaGCTGGGAAAACTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAICVSS*LGKLGL Trigger: GAGTCCAAGTTTTCCCAGTCAACTGGAGACACAGAT...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTATCTTCTTCCTCCTCTaGTACCTCATACCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCIFFLL*YLIPTD Trigger: ATCGGTGGGTATGAGGTATCAGAGGAGGAAGAAGAT...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTCTTTCGCCTTCCAACTaGCCTGCTCCATTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILLSPSN*PAPLML Trigger: CAACATCAATGGAGCAGGGCAGTTGGAAGGCGAAAG...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACACCGCAAGATGCTTCTTaGACTCGTCATCCAAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SILFLKQGRYKQGTHSVTPQDAS*TRHPRR Trigger: GCGTCTTGGATGACGAGTGCAAGAAGCATCTTGCGG...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACGGATAAAGGCGTTTaGGCACGTTTTCACGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVTDKGV*ARFHGV Trigger: CACTCCGTGAAAACGTGCGCAAACGCCTTTATCCGT...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCCATTCGGCCACTCTTaGCTTGGTATCCATTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGPFGHS*LGIHYF Trigger: AAAGTAATGGATACCAAGCCAAGAGTGGCCGAATGG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGTCACAGTGAACAGTaGTTCCAACCCGTCGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGSHSEQ*FQPVVF Trigger: AAAAACGACGGGTTGGAACCACTGTTCACTGTGACT...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCTCCGGCGCCGGTGGATaGATTTATGAGGTCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVSGAGG*IYEVYS Trigger: TGAATAGACCTCATAAATCCATCCACCGGCGCCGGA...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACCCTGGCTTAGTACGCTaGGCCCAGAGCGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNPGLVR*AQSAAL Trigger: AAGAGCAGCGCTCTGGGCCCAGCGTACTAAGCCAGG...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
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| CDS-3UTR CCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAACAGTGTCTCCGGCAATaGAGTGGAAATCCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQQCLRQ*SGNPHC Trigger: ACAGTGAGGATTTCCACTCCATTGCCGGAGACACTG...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
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| CDS-3UTR TCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCACAGAGATTTCTGGTTaGCTTCTAATTCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGTEISG*LLIPLS Trigger: GCTCAGTGGAATTAGAAGTCAACCAGAAATCTCTGT...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR TCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAATCTGTGTCTCCAGTTaGCTGGGAAAACTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQICVSS*LGKLGL Trigger: GAGTCCAAGTTTTCCCAGTCAACTGGAGACACAGAT...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR TCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTGTTAAGGCTGGTCACTaGAGCTGTGTCATCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILVKAGH*SCVIIS Trigger: AGAGATGATGACACAGCTTCAGTGACCAGCCTTAAC...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACATACAAATCAGGAGGCTaGGGTGTATATGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SILFLKQGRYKQGTHSVTYKSGG*GVYGPG Trigger: TCCAGGGCCATATACACCTCAGCCTCCTGATTTGTA...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCGTAGGAAAGAAGGGCTaGCGTAATTCTACAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVVGKKG*RNSTAG Trigger: TCCAGCTGTAGAATTACGGCAGCCCTTCTTTCCTAC...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAGGACCAGAGATTTTCTaGGAACTTCATCTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAGPEIF*ELHLHS Trigger: AGAGTGCAGATGAAGTTCGCAGAAAATCTCTGGTCC...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR GCA 90 bp | ATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTACTTAACGGATAAAGGCGTTTaGGCACGTTTTCACGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPMAPLNFRFHLLSLDYLTDKGV*ARFHGV Trigger: CACTCCGTGAAAACGTGCGCAAACGCCTTTATCCGT...TAAGTAGTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTGTATTCTCTTGAAGCACACGGGGCTGTTTGGGTCTTAAACTGCCAGATTTCTACCTGTGTTAGCTaGTTTTCTGAAGTAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYSLEAHGAVWVLNCQISTCVS*FSEVAL Trigger: CAGTGCTACTTCAGAAAAGCAGCTAACACAGGTAGA...AATCTGGCAGTTTAAGACCCAAACAGCCCCGTGTGCTTCAAGAGAATACAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTAAGTTCTGTGACACTTaGCAACAGCTTCGTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILKFCDT*QQLRGI Trigger: GATGCCACGAAGCTGTTGCCAAGTGTCACAGAACTT...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCAAGTTCTGTGACACTTaGCAACAGCTTCGTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVKFCDT*QQLRGI Trigger: GATGCCACGAAGCTGTTGCCAAGTGTCACAGAACTT...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCGAGCACTCCTCTTCCTaGACCTGCCCTTCCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSEHSSS*TCPSCI Trigger: TATACAGGAAGGGCAGGTCCAGGAAGAGGAGTGCTC...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTAGTCACAGTGAACAGTaGTTCCAACCCGTCGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCSHSEQ*FQPVVF Trigger: AAAAACGACGGGTTGGAACCACTGTTCACTGTGACT...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAACAGGAGCCATCATTGTaGTTTCATCATCAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQQEPSL*FHHQRD Trigger: GTCTCTCTGATGATGAAATCACAATGATGGCTCCTG...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCAGTCTTCTTCATTTTaGAGCCATAATCAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGQSSSF*SHNQSH Trigger: GTGGCTTTGATTATGGCTTCAAAATGAAGAAGACTG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGTGCTTCAGCAAAGGCTaGACTGAGTGTGGACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKWWHVYTTRAINAIKGVCFSKG*TECGPG Trigger: GCCAGGTCCACACTCAGTTCAGCCTTTGCTGAAGCA...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACAGTTAAGGCTGGTCACTaGAGCTGTGTCATCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SILFLKQGRYKQGTHSVTVKAGH*SCVIIS Trigger: AGAGATGATGACACAGCTTCAGTGACCAGCCTTAAC...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CATTCATCAGAGTCCAAATCAGTGTCTCCGGCAATGGAGTGGAAATCCTCACTGTATCCTCTTTCTCTTTaGGTTTTTCATCGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSESKSVSPAMEWKSSLYPLSL*VFHRRD Trigger: ATCTCTGCGATGAAAAACTCAAAGAGAAAGAGGATA...CAGTGAGGATTTCCACTCCATTGCCGGAGACACTGATTTGGACTCTGATGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCTACAAATCAGGAGGCTaGGGTGTATATGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSYKSGG*GVYGPG Trigger: TCCAGGGCCATATACACCTCAGCCTCCTGATTTGTA...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCCACTTTCACTTAGCTaGATAGCAAAGAAAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGPLSLS*IAKKGL Trigger: TAACCCTTTCTTTGCTATTCAGCTAAGTGAAAGTGG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTCATAATCAAAGCCACTaGCATCTTCAGGAACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCHNQSH*HLQEHL Trigger: TAGGTGTTCCTGAAGATGGCAGTGGCTTTGATTATG...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCACAGCTGGAATTGAGTaGTGGATAATATTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGTAGIE*WIIFPP Trigger: TGGAGGAAATATTATCCAGCACTCAATTCCAGCTGT...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCGACTCTGGTATTTGTaGTTGGAGATATTCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGRLWYL*LEIFLR Trigger: ACGTAAGAATATCTCCAAGCACAAATACCAGAGTCG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACCTTCCTGTGTTAGCTaGTTTTCTGAAGTAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQPSCVS*FSEVAL Trigger: CAGTGCTACTTCAGAAAAGCAGCTAACACAGGAAGG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAATCCTTCCTCTTCATCTaGAAGATCACCATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQSFLFI*KITISI Trigger: GATGGAGATGGTGATCTTGCAGATGAAGAGGAAGGA...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACCTTCCCATTGTCTGCTaGTATCTTCTACTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFIPMAPLNFRFHLLSLDLPIVC*YLLLSS Trigger: AGATGAAAGTAGAAGATACCAGCAGACAATGGGAAG...GTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCTTCCCATTGTCTGCTaGTATCTTCTACTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGLPIVC*YLLLSS Trigger: AGATGAAAGTAGAAGATACCAGCAGACAATGGGAAG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTAGAAACCTATTCTAGTTCTCCTTTTGAGTCTCAAGTGCCAACTGGTGAGCACTCCTCTTCCTaGACCTGCCCTTCCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KILETYSSSPFESQVPTGEHSSS*TCPSCI Trigger: TATACAGGAAGGGCAGGTCCAGGAAGAGGAGTGCTC...ACCAGTTGGCACTTGAGACTCAAAAGGAGAACTAGAATAGGTTTCTAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCTCATCAGAGAGACACTaGTCTGGAAGTGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSSSERH*SGSGGG Trigger: TCCTCCTCCACTTCCAGACCAGTGTCTCTCTGATGA...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTCCATTCGGCCACTCTTaGCTTGGTATCCATTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILPFGHS*LGIHYF Trigger: AAAGTAATGGATACCAAGCCAAGAGTGGCCGAATGG...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAACCATTCGGCCACTCTTaGCTTGGTATCCATTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQPFGHS*LGIHYF Trigger: AAAGTAATGGATACCAAGCCAAGAGTGGCCGAATGG...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CATTCATCAGAGTCCAAATCAGTGTCTCCGGCAATGGAGTGGAAATCCTCACTGAGTCTCCAAATCCATTaGACTGACAATCACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSSESKSVSPAMEWKSSLSLQIH*TDNHFV Trigger: TACAAAGTGATTGTCAGTCCAATGGATTTGGAGACT...CAGTGAGGATTTCCACTCCATTGCCGGAGACACTGATTTGGACTCTGATGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCGTCCTCTGAGAGGTaGACCTGGCTTAGTACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLSSSER*TWLSTL Trigger: CAGCGTACTAAGCCAGGTCCACCTCTCAGAGGACGA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGTCGTCCTCTGAGAGGTaGACCTGGCTTAGTACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKSSSER*TWLSTL Trigger: CAGCGTACTAAGCCAGGTCCACCTCTCAGAGGACGA...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACAGTAACTGGCCAGGATaGAGAGAACCCAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNSNWPG*REPRKG Trigger: GCCTTTCCTGGGTTCTCTTCATCCTGGCCAGTTACT...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTGGGCAAATTTTCGAATaGACTCTTCATCTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCGQIFE*TLHLLW Trigger: CCACAAAAGATGAAGAGTTCATTCGAAAATTTGCCC...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAAGAAATCTGAGTCAGTaGGTGCTTTGGTCCATTATA | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFARNLSQ*VLWSII Trigger: TATAATGGACCAAAGCACTCACTGACTCAGATTTCT...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAAAGCTTCCCATTGTCTaGTGGTATCTTCTACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAKLPIV*WYLLLS Trigger: TGAAAGTAGAAGATACCAGCAGACAATGGGAAGCTT...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAACATAATCAAAGCCACTaGCATCTTCAGGAACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQHNQSH*HLQEHL Trigger: TAGGTGTTCCTGAAGATGGCAGTGGCTTTGATTATG...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCACTTCCCATTGTCTGCTaGTATCTTCTACTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFALPIVC*YLLLSS Trigger: AGATGAAAGTAGAAGATACCAGCAGACAATGGGAAG...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCACACTGGTCTGGAAGTaGAGGAGGAGCATAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSTLVWK*RRSIVI Trigger: TATGACTATGCTCCTCCTCCACTTCCAGACCAGTGT...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCGCATTAACTGGAGTATaGAAAGGGTATGTATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSVMSSHSSILFLKQGALTGV*KGYVFG Trigger: TCCAAATACATACCCTTTCCATACTCCAGTTAATGC...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTAGAAACCTATTCTAGTTCTCCTTTTGAGTCTCAAGTGCCAACTGGTCCTCATACAAGACACTaGCTTGGGGCTGTTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KILETYSSSPFESQVPTGPHTRH*LGAVVQ Trigger: CTGTACAACAGCCCCAAGCCAGTGTCTTGTATGAGG...ACCAGTTGGCACTTGAGACTCAAAAGGAGAACTAGAATAGGTTTCTAGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCTCCGGCAATGGAGTaGAAATCCTCACTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLSPAME*KSSLSS Trigger: GGAGGACAGTGAGGATTTCCACTCCATTGCCGGAGA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTCAGTCTTCTTCATTTTaGAGCCATAATCAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILQSSSF*SHNQSH Trigger: GTGGCTTTGATTATGGCTTCAAAATGAAGAAGACTG...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCGGGCAAATTTTCGAATaGACTCTTCATCTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVGQIFE*TLHLLW Trigger: CCACAAAAGATGAAGAGTTCATTCGAAAATTTGCCC...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTCCACTTTCACTTAGCTaGATAGCAAAGAAAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHSHPSEAITANTLMYILPLSLS*IAKKGL Trigger: TAACCCTTTCTTTGCTATTCAGCTAAGTGAAAGTGG...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGCTTTCGCCTTCCAACTaGCCTGCTCCATTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKWWHVYTTRAINAIKGVLSPSN*PAPLML Trigger: CAACATCAATGGAGCAGGGCAGTTGGAAGGCGAAAG...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | AAAATTCTAGAAACCTATTCTAGTTCTCCTTTTGAGTCTCAAGTGCCAACTGGTGTAGGAAAGAAGGGCTaGCGTAATTCTACAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KILETYSSSPFESQVPTGVGKKG*RNSTAG Trigger: TCCAGCTGTAGAATTACGGCAGCCCTTCTTTCCTAC...ACCAGTTGGCACTTGAGACTCAAAAGGAGAACTAGAATAGGTTTCTAGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCGGACCAGAGATTTTCTaGGAACTTCATCTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSGPEIF*ELHLHS Trigger: AGAGTGCAGATGAAGTTCGCAGAAAATCTCTGGTCC...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGACGGATAAAGGCGTTTaGGCACGTTTTCACGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKTDKGV*ARFHGV Trigger: CACTCCGTGAAAACGTGCGCAAACGCCTTTATCCGT...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACGACTCTGGTATTTGTaGTTGGAGATATTCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQRLWYL*LEIFLR Trigger: ACGTAAGAATATCTCCAAGCACAAATACCAGAGTCG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCACCAGTAATATCATCTTaGTCCTTCTCTTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAPVISS*SFSFFS Trigger: ACTGAAGAAAGAGAAGGACCAAGATGATATTACTGG...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAATCCAGGCCTAAATTCTaGAAAAAGTTCTGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQSRPKF*KKFCDT Trigger: AGTGTCACAGAACTTTTTCCAGAATTTAGGCCTGGA...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACTCATCAGAGAGACACTaGTCTGGAAGTGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNSSERH*SGSGGG Trigger: TCCTCCTCCACTTCCAGACCAGTGTCTCTCTGATGA...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTACTTAAGCTTTTCCTTTTCCTaGTTCCGTTTAAGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPMAPLNFRFHLLSLDYLSFSFS*FRLSLL Trigger: GAGGAGACTTAAACGGAACCAGGAAAAGGAAAAGCT...TAAGTAGTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCGGCGCCGGTGGATaGATTTATGAGGTCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLSGAGG*IYEVYS Trigger: TGAATAGACCTCATAAATCCATCCACCGGCGCCGGA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGCCTCATACAAGACACTaGCTTGGGGCTGTTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKPHTRH*LGAVVQ Trigger: CTGTACAACAGCCCCAAGCCAGTGTCTTGTATGAGG...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACCAGTGTCTCCGGCAATaGAGTGGAAATCCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNQCLRQ*SGNPHC Trigger: ACAGTGAGGATTTCCACTCCATTGCCGGAGACACTG...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCACAGAGATTTCTGGTTaGCTTCTAATTCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSTEISG*LLIPLS Trigger: GCTCAGTGGAATTAGAAGTCAACCAGAAATCTCTGT...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACACAGTCTTCTTCATTTTaGAGCCATAATCAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SILFLKQGRYKQGTHSVTQSSSF*SHNQSH Trigger: GTGGCTTTGATTATGGCTTCAAAATGAAGAAGACTG...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACGTTAAGGCTGGTCACTaGAGCTGTGTCATCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNVKAGH*SCVIIS Trigger: AGAGATGATGACACAGCTTCAGTGACCAGCCTTAAC...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACAAGAAATCTGAGTCAGTaGGTGCTTTGGTCCATTATA | + |
|
Preference number: 4 (lower is better) Translates to: SILFLKQGRYKQGTHSVTRNLSQ*VLWSII Trigger: TATAATGGACCAAAGCACTCACTGACTCAGATTTCT...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCTATCCTCTTTCTCTTTaGGTTTTTCATCGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVYPLSL*VFHRRD Trigger: ATCTCTGCGATGAAAAACTCAAAGAGAAAGAGGATA...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTCTAGAAACCTATTCTAGTTCTCCTTTTGAGTCTCAAGTGCCAACTGGTCATAGCTCCCATAACTaGTGTTGCTATCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KILETYSSSPFESQVPTGHSSHN*CCYPPN Trigger: GTTTGGAGGATAGCAACATCAGTTATGGGAGCTATG...ACCAGTTGGCACTTGAGACTCAAAAGGAGAACTAGAATAGGTTTCTAGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCTGTGTATGTGTGTTTTaGTTTGTTTGGCTAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVCVCVF*FVWLVG Trigger: ACCAACTAGCCAAACAAAGCAAAACACACATACACA...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR GCA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAGTAGGAAAGAAGGGCTaGCGTAATTCTACAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTTYHSEIYSYIPVIYLAVGKKG*RNSTAG Trigger: TCCAGCTGTAGAATTACGGCAGCCCTTCTTTCCTAC...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCATTGTTCTCTCATCTTTaGCTTCTTTTTGATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFALFSHL*LLFDVL Trigger: AAGCACATCAAAAAGAAGGCAAAGATGAGAGAACAA...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCCCAGTAATATCATCTTaGTCCTTCTCTTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVPVISS*SFSFFS Trigger: ACTGAAGAAAGAGAAGGACCAAGATGATATTACTGG...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTAAAGTTCTGTGACACTTaGCAACAGCTTCGTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLKFCDT*QQLRGI Trigger: GATGCCACGAAGCTGTTGCCAAGTGTCACAGAACTT...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGACACTGGTCTGGAAGTaGAGGAGGAGCATAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VKWWHVYTTRAINAIKGVTLVWK*RRSIVI Trigger: TATGACTATGCTCCTCCTCCACTTCCAGACCAGTGT...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACACACTGGTCTGGAAGTaGAGGAGGAGCATAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNTLVWK*RRSIVI Trigger: TATGACTATGCTCCTCCTCCACTTCCAGACCAGTGT...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAGAAAGGGTATGTATTTaGAAGATCTCTCATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: EFQSHCPNLMASSYLTFAERVCI*KISHVI Trigger: AATGACATGAGAGATCTTCCAAATACATACCCTTTC...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTGAAAGGGTATGTATTTaGAAGATCTCTCATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: PSSNAKLLKICFLSVFQCERVCI*KISHVI Trigger: AATGACATGAGAGATCTTCCAAATACATACCCTTTC...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCGCATTAACTGGAGTATaGAAAGGGTATGTATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSILFLKQGRYKQGTHSVALTGV*KGYVFG Trigger: TCCAAATACATACCCTTTCCATACTCCAGTTAATGC...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAAGTCTCCAAATCCATTaGACTGACAATCACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VMSSHSSILFLKQGRYKQSLQIH*TDNHFV Trigger: TACAAAGTGATTGTCAGTCCAATGGATTTGGAGACT...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| 3UTR CAA 72 bp | TTAACATTGTTTGAATTCCAGTCTCACTGCCCCAACTaGATGGCAAGCTCTTATTTAACCTTTGCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLFEFQSHCPN*MASSYLTFALQ Trigger: TTGCAGTGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTCAAACAATGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCACAGGAGCCATCATTGTaGTTTCATCATCAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MTTYHSEIYSYIPVIYLAQEPSL*FHHQRD Trigger: GTCTCTCTGATGATGAAATCACAATGATGGCTCCTG...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCGGGCAAATTTTCGAATaGACTCTTCATCTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSGQIFE*TLHLLW Trigger: CCACAAAAGATGAAGAGTTCATTCGAAAATTTGCCC...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTACTTATATCCTCTTTCTCTTTaGGTTTTTCATCGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPMAPLNFRFHLLSLDYLYPLSL*VFHRRD Trigger: ATCTCTGCGATGAAAAACTCAAAGAGAAAGAGGATA...TAAGTAGTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR TCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGCATAGCTCCCATAACTaGTGTTGCTATCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKWWHVYTTRAINAIKGVHSSHN*CCYPPN Trigger: GTTTGGAGGATAGCAACATCAGTTATGGGAGCTATG...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAATTGTTCTCTCATCTTTaGCTTCTTTTTGATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPSFSVMSSHSSILFLKQLFSHL*LLFDVL Trigger: AAGCACATCAAAAAGAAGGCAAAGATGAGAGAACAA...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAGGACCAGAGATTTTCTaGGAACTTCATCTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTTYHSEIYSYIPVIYLAGPEIF*ELHLHS Trigger: AGAGTGCAGATGAAGTTCGCAGAAAATCTCTGGTCC...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCCGACTCTGGTATTTGTaGTTGGAGATATTCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSRLWYL*LEIFLR Trigger: ACGTAAGAATATCTCCAAGCACAAATACCAGAGTCG...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCACCTTCCTGTGTTAGCTaGTTTTCTGAAGTAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MTTYHSEIYSYIPVIYLAPSCVS*FSEVAL Trigger: CAGTGCTACTTCAGAAAAGCAGCTAACACAGGAAGG...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGTCCTTCCTCTTCATCTaGAAGATCACCATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKSFLFI*KITISI Trigger: GATGGAGATGGTGATCTTGCAGATGAAGAGGAAGGA...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCTCCAGGCCTAAATTCTaGAAAAAGTTCTGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: VPVCQLESKMVACLYNKSSRPKF*KKFCDT Trigger: AGTGTCACAGAACTTTTTCCAGAATTTAGGCCTGGA...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGAGTCACAGTGAACAGTaGTTCCAACCCGTCGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKSHSEQ*FQPVVF Trigger: AAAAACGACGGGTTGGAACCACTGTTCACTGTGACT...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTACTTAAGTCTCCAAATCCATTaGACTGACAATCACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPMAPLNFRFHLLSLDYLSLQIH*TDNHFV Trigger: TACAAAGTGATTGTCAGTCCAATGGATTTGGAGACT...TAAGTAGTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTAACAGAGATTTCTGGTTaGCTTCTAATTCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLTEISG*LLIPLS Trigger: GCTCAGTGGAATTAGAAGTCAACCAGAAATCTCTGT...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGCATAATCAAAGCCACTaGCATCTTCAGGAACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: VKWWHVYTTRAINAIKGVHNQSH*HLQEHL Trigger: TAGGTGTTCCTGAAGATGGCAGTGGCTTTGATTATG...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAAGCTTTTCCTTTTCCTaGTTCCGTTTAAGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MTTYHSEIYSYIPVIYLASFSFS*FRLSLL Trigger: GAGGAGACTTAAACGGAACCAGGAAAAGGAAAAGCT...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGAGCTTTTCCTTTTCCTaGTTCCGTTTAAGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKWWHVYTTRAINAIKGVSFSFS*FRLSLL Trigger: GAGGAGACTTAAACGGAACCAGGAAAAGGAAAAGCT...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAAAGCTTCCCATTGTCTaGTGGTATCTTCTACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MTTYHSEIYSYIPVIYLAKLPIV*WYLLLS Trigger: TGAAAGTAGAAGATACCAGCAGACAATGGGAAGCTT...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTAACAGCTGGAATTGAGTaGTGGATAATATTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLTAGIE*WIIFPP Trigger: TGGAGGAAATATTATCCAGCACTCAATTCCAGCTGT...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACTCCAGGCCTAAATTCTaGAAAAAGTTCTGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: MNQAHSNIICWDSVIFKNSRPKF*KKFCDT Trigger: AGTGTCACAGAACTTTTTCCAGAATTTAGGCCTGGA...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR GCA 90 bp | AAAATTCTAGAAACCTATTCTAGTTCTCCTTTTGAGTCTCAAGTGCCAACTGGTTTGTTCTCTCATCTTTaGCTTCTTTTTGATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KILETYSSSPFESQVPTGLFSHL*LLFDVL Trigger: AAGCACATCAAAAAGAAGGCAAAGATGAGAGAACAA...ACCAGTTGGCACTTGAGACTCAAAAGGAGAACTAGAATAGGTTTCTAGAATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCAAATAAGGGACACTaGTGGCCAACAACAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SEIYSYIPVIYLATRHCLSNKGH*WPTTKI Trigger: TATTTTTGTTGTTGGCCAGCAGTGTCCCTTATTTGA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGGCATTAACTGGAGTATaGAAAGGGTATGTATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKALTGV*KGYVFG Trigger: TCCAAATACATACCCTTTCCATACTCCAGTTAATGC...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGGAAAGGGTATGTATTTaGAAGATCTCTCATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: IYSYIPVIYLATRHCLSKERVCI*KISHVI Trigger: AATGACATGAGAGATCTTCCAAATACATACCCTTTC...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS TCA 90 bp | ATGGGCCTCCACCAGCCGACTCTTCGTCGCTGTCTGTGTCGGACATaGCGACGGAAGGGCTACCGCCACCCTTGTCCTGCAGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MGLHQPTLRRCLCRT*RRKGYRHPCPAAAQ Trigger: CTGGGCTGCTGCAGGACAAGGGTGGCGGTAGCCCTTCCGTCGTCATGTCCGACACAGACAGCGACGAAGAGTCGGCTGGTGGAGGCCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTGGGCTACCGCCACCCTaGTCCTGCAGCAGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSSNAKLLKICFLSVFQCGLPPP*SCSSPA Trigger: GGCTGGGCTGCTGCAGGACAAGGGTGGCGGTAGCCC...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCGGGCTACCGCCACCCTaGTCCTGCAGCAGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSILFLKQGRYKQGTHSVGLPPP*SCSSPA Trigger: GGCTGGGCTGCTGCAGGACAAGGGTGGCGGTAGCCC...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCCCGCAAGATGCTTCTaGCACTCGTCATCCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: PSFSVMSSHSSILFLKQGPARCF*HSSSKT Trigger: CGTCTTGGATGACGAGTGCAAGAAGCATCTTGCGGG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS GCA 90 bp | TTCTGGTTGACTTCTAATTCCACTGAGCACTCCTCTTCCTGGACCTaGCCTTCCTGTATAAGCTCACGGTGCTTCTTTTTCCTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FWLTSNSTEHSSSWT*PSCISSRCFFFLFL Trigger: GAGAAAGAGGAAAAAGAAGCACCGTGAGCTTATACAGGAAGGGCAGGTCCAGGAAGAGGAGTGCTCAGTGGAATTAGAAGTCAACCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
||
| CDS CCA 90 bp | AGAGATTTCTGGTTGACTTCTAATTCCACTGAGCACTCCTCTTCCTaGACCTGCCCTTCCTGTATAAGCTCACGGTGCTTCTTTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RDFWLTSNSTEHSSS*TCPSCISSRCFFFL Trigger: GAGGAAAAAGAAGCACCGTGAGCTTATACAGGAAGGGCAGGTCCAGGAAGAGGAGTGCTCAGTGGAATTAGAAGTCAACCAGAAATCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
||
| CDS-3UTR CAA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCACCTGCTCCATTGATGTaGCCGAACAGGAACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EFQSHCPNLMASSYLTFAPAPLM*PNRNPV Trigger: AACTGGGTTCCTGTTCGGCAACATCAATGGAGCAGG...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCCCCGCAAGATGCTTCTaGCACTCGTCATCCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SSILFLKQGRYKQGTHSVPARCF*HSSSKT Trigger: CGTCTTGGATGACGAGTGCAAGAAGCATCTTGCGGG...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCACCTCGAAGGCCCTGTaGCTTGGGATAGTAATACTC | + |
|
Preference number: 5 (lower is better) Translates to: PSFSVMSSHSSILFLKQGTSKAL*LGIVIL Trigger: GAGTATTACTATCCCAAGCAACAGGGCCTTCGAGGT...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCCCTGCTCCATTGATGTaGCCGAACAGGAACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSILFLKQGRYKQGTHSVPAPLM*PNRNPV Trigger: AACTGGGTTCCTGTTCGGCAACATCAATGGAGCAGG...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTGCTGTGGCTCTTCCTaGATGACTCCTGTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFIPMAPLNFRFHLLSLDCCGSS*MTPVFP Trigger: AGGAAAAACAGGAGTCATCAAGGAAGAGCCACAGCA...GTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTCATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTCTCGGATGTGTGTATaGGCCCTTTTGGAGTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PFIPMAPLNFRFHLLSLDSRMCV*ALLELG Trigger: TCCTAACTCCAAAAGGGCCAATACACACATCCGAGA...GTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCCCCGCAAGATGCTTCTaGCACTCGTCATCCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: VPVCQLESKMVACLYNKSPARCF*HSSSKT Trigger: CGTCTTGGATGACGAGTGCAAGAAGCATCTTGCGGG...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAACCTCGAAGGCCCTGTaGCTTGGGATAGTAATACTC | + |
|
Preference number: 5 (lower is better) Translates to: CPSFSVMSSHSSILFLKQTSKAL*LGIVIL Trigger: GAGTATTACTATCCCAAGCAACAGGGCCTTCGAGGT...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAATGCTGTGGCTCTTCCTaGATGACTCCTGTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VMSSHSSILFLKQGRYKQCCGSS*MTPVFP Trigger: AGGAAAAACAGGAGTCATCAAGGAAGAGCCACAGCA...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACAACCTCGAAGGCCCTGTaGCTTGGGATAGTAATACTC | + |
|
Preference number: 5 (lower is better) Translates to: SILFLKQGRYKQGTHSVTTSKAL*LGIVIL Trigger: GAGTATTACTATCCCAAGCAACAGGGCCTTCGAGGT...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTATTCTCTTGAAGCACACGGGGCTGTTTGGGTCTTAAACTGCCAGATTATCTTTGCCTTCTTTTaGATGTGCTTCAGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLYSLEAHGAVWVLNCQIIFAFF*MCFSKG Trigger: GCCTTTGCTGAAGCACATCAAAAAGAAGGCAAAGAT...AATCTGGCAGTTTAAGACCCAAACAGCCCCGTGTGCTTCAAGAGAATACAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCTCTCGGATGTGTGTATaGGCCCTTTTGGAGTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSILFLKQGRYKQGTHSVSRMCV*ALLELG Trigger: TCCTAACTCCAAAAGGGCCAATACACACATCCGAGA...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACTACTTATCCATCCCTGTACGTTaGAAGTCGGCACAGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IPMAPLNFRFHLLSLDYLSIPVR*KSAQSF Trigger: AAAGCTCTGTGCCGACTTCAAACGTACAGGGATGGA...TAAGTAGTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACATCCATCCCTGTACGTTaGAAGTCGGCACAGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SILFLKQGRYKQGTHSVTSIPVR*KSAQSF Trigger: AAAGCTCTGTGCCGACTTCAAACGTACAGGGATGGA...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTTATCTGTGTCTCCAGTaGACTGGGAAAACTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LHSHPSEAITANTLMYILYLCLQ*TGKTWT Trigger: AGTCCAAGTTTTCCCAGTCAACTGGAGACACAGATA...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACATGCTGTGGCTCTTCCTaGATGACTCCTGTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SILFLKQGRYKQGTHSVTCCGSS*MTPVFP Trigger: AGGAAAAACAGGAGTCATCAAGGAAGAGCCACAGCA...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAACAGCCACTGAAAACCTaGATCCACGAGCAAATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CPSFSVMSSHSSILFLKQQPLKT*IHEQIY Trigger: GTAAATTTGCTCGTGGATCAAGGTTTTCAGTGGCTG...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGCCTGCTCCATTGATGTaGCCGAACAGGAACCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IYSYIPVIYLATRHCLSKPAPLM*PNRNPV Trigger: AACTGGGTTCCTGTTCGGCAACATCAATGGAGCAGG...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTACCAGTAATATCATCTaGGTCCTTCTCTTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSNAKLLKICFLSVFQCTSNII*VLLFLQ Trigger: CTGAAGAAAGAGAAGGACCAAGATGATATTACTGGT...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | GAATTCCAGTCTCACTGCCCCAACTTGATGGCAAGCTCTTATTTAACCTTTGCAACCAGTAATATCATCTaGGTCCTTCTCTTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EFQSHCPNLMASSYLTFATSNII*VLLFLQ Trigger: CTGAAGAAAGAGAAGGACCAAGATGATATTACTGGT...TGCAAAGGTTAAATAAGAGCTTGCCATCAAGTTGGGGCAGTGAGACTGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACACAGAGATTTCTGGTaGACTTCTAATTCCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VMSSHSSILFLKQGRYKQHRDFW*TSNSTE Trigger: CTCAGTGGAATTAGAAGTCAACCAGAAATCTCTGTG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTGTTGATGACAAAACCTaGTTCTGTAGGTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSSNAKLLKICFLSVFQCVDDKT*FCRSKM Trigger: CATCTTTGACCTACAGAACAAGGTTTTGTCATCAAC...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCATTCCAATGGCACCATTGAACTTTAGATTCCACCTCCTTAGCTTGGACCTCTGGTATTTGTGCTaGGAGATATTCTTACGTATA | + |
|
Preference number: 5 (lower is better) Translates to: PFIPMAPLNFRFHLLSLDLWYLC*EIFLRI Trigger: TATACGTAAGAATATCTCCAAGCACAAATACCAGAG...GTCCAAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCCTCTGGTATTTGTGCTaGGAGATATTCTTACGTATA | + |
|
Preference number: 5 (lower is better) Translates to: PSFSVMSSHSSILFLKQGLWYLC*EIFLRI Trigger: TATACGTAAGAATATCTCCAAGCACAAATACCAGAG...GCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGACTGGCTTGGGGCTGTaGTACAGTTCCTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKWWHVYTTRAINAIKGVTGLGL*YSSFLF Trigger: GAAGAGGAAGGAACTGTACAACAGCCCCAAGCCAGT...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CAA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACACTGGCTTGGGGCTGTaGTACAGTTCCTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MNQAHSNIICWDSVIFKNTGLGL*YSSFLF Trigger: GAAGAGGAAGGAACTGTACAACAGCCCCAAGCCAGT...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGAGGAGGCATCAATTaGCAATCAATATCTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: CPSFSVMSSHSSILFLKQGGGIN*QSISSQ Trigger: TTGTGAAGATATTGATTGCAAATTGATGCCTCCTCC...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACCAGTAATATCATCTaGGTCCTTCTCTTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSILFLKQGRYKQGTHSVTSNII*VLLFLQ Trigger: CTGAAGAAAGAGAAGGACCAAGATGATATTACTGGT...GACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACACACAGAGATTTCTGGTaGACTTCTAATTCCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SILFLKQGRYKQGTHSVTHRDFW*TSNSTE Trigger: CTCAGTGGAATTAGAAGTCAACCAGAAATCTCTGTG...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAATTGTGTATGTGTGTTTaGCTTTGTTTGGCTAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPSFSVMSSHSSILFLKQLCMCV*LCLASW Trigger: CCAACTAGCCAAACAAAGCAAAACACACATACACAA...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
||
| CDS-3UTR CAA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCATCCCTGTACGTTaGAAGTCGGCACAGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEIYSYIPVIYLATRHCLSIPVR*KSAQSF Trigger: AAAGCTCTGTGCCGACTTCAAACGTACAGGGATGGA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTGTTGATGACAAAACCTaGTTCTGTAGGTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LHSHPSEAITANTLMYILVDDKT*FCRSKM Trigger: CATCTTTGACCTACAGAACAAGGTTTTGTCATCAAC...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTTTGATAAGACCTCTGTaGATGACAAAACCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSNAKLLKICFLSVFQCLIRPL*MTKPCS Trigger: AGAACAAGGTTTTGTCATCAACAGAGGTCTTATCAA...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCGTCTTTCAGTGTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGAAAGGGTATGTATTaGGAAGATCTCTCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPSFSVMSSHSSILFLKQGKGMY*EDLSCH Trigger: ATGACATGAGAGATCTTCCAAATACATACCCTTTCC...TTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATTCCCATCCCTCAGAGGCTATCACTGCTAACACTTTAATGTACATTCTTGGAAAGGGTATGTATTaGGAAGATCTCTCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LHSHPSEAITANTLMYILGKGMY*EDLSCH Trigger: ATGACATGAGAGATCTTCCAAATACATACCCTTTCC...AAGAATGTACATTAAAGTGTTAGCAGTGATAGCCTCTGAGGGATGGGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGCTCAAATGCAAAGCTCTTGAAGATATGCTTCCTGTCCGTCTTTCAGTGTTTATCCTCTTTCTCTTaGAGTTTTTCATCGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSSNAKLLKICFLSVFQCLSSFS*SFSSQR Trigger: TCTCTGCGATGAAAAACTCAAAGAGAAAGAGGATAA...ACACTGAAAGACGGACAGGAAGCATATCTTCAAGAGCTTTGCATTTGAGCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCATCTCGGATGTGTGTATaGGCCCTTTTGGAGTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MTTYHSEIYSYIPVIYLASRMCV*ALLELG Trigger: TCCTAACTCCAAAAGGGCCAATACACACATCCGAGA...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGTCTAGTCACTCCAGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAACTCTGGTATTTGTGCTaGGAGATATTCTTACGTATA | + |
|
Preference number: 5 (lower is better) Translates to: VMSSHSSILFLKQGRYKQLWYLC*EIFLRI Trigger: TATACGTAAGAATATCTCCAAGCACAAATACCAGAG...TTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCTGGAGTGACTAGACATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTCTGCCAATTAGAAAGTAAAATGGTGGCATGTTTATACAACAAGAGCGGAGGAGGCATCAATTaGCAATCAATATCTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VPVCQLESKMVACLYNKSGGGIN*QSISSQ Trigger: TTGTGAAGATATTGATTGCAAATTGATGCCTCCTCC...GCTCTTGTTGTATAAACATGCCACCATTTTACTTTCTAATTGGCAGACTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCATATCTGTGTCTCCAGTaGACTGGGAAAACTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: MTTYHSEIYSYIPVIYLAYLCLQ*TGKTWT Trigger: AGTCCAAGTTTTCCCAGTCAACTGGAGACACAGATA...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATATCTGTGTCTCCAGTaGACTGGGAAAACTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: SEIYSYIPVIYLATRHCLYLCLQ*TGKTWT Trigger: AGTCCAAGTTTTCCCAGTCAACTGGAGACACAGATA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGCAGCCACTGAAAACCTaGATCCACGAGCAAATTTAC | + |
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Preference number: 5 (lower is better) Translates to: VKWWHVYTTRAINAIKGVQPLKT*IHEQIY Trigger: GTAAATTTGCTCGTGGATCAAGGTTTTCAGTGGCTG...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTACAGCCACTGAAAACCTaGATCCACGAGCAAATTTAC | + |
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Preference number: 5 (lower is better) Translates to: SEIYSYIPVIYLATRHCLQPLKT*IHEQIY Trigger: GTAAATTTGCTCGTGGATCAAGGTTTTCAGTGGCTG...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | AGCATCCTTTTTCTGAAACAAGGCAGGTACAAACAAGGAACACATTCTGTCACATTATCCTCTTTCTCTTaGAGTTTTTCATCGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SILFLKQGRYKQGTHSVTLSSFS*SFSSQR Trigger: TCTCTGCGATGAAAAACTCAAAGAGAAAGAGGATAA...TGTGACAGAATGTGTTCCTTGTTTGTACCTGCCTTGTTTCAGAAAAAGGATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGCACAGAGATTTCTGGTaGACTTCTAATTCCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: VKWWHVYTTRAINAIKGVHRDFW*TSNSTE Trigger: CTCAGTGGAATTAGAAGTCAACCAGAAATCTCTGTG...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGATCTTTGCCTTCTTTTaGATGTGCTTCAGCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VKWWHVYTTRAINAIKGVIFAFF*MCFSKG Trigger: GCCTTTGCTGAAGCACATCAAAAAGAAGGCAAAGAT...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | ATGAATCAGGCACACAGTAACATTATCTGTTGGGATTCTGTGATTTTTAAGAACATCTTTGCCTTCTTTTaGATGTGCTTCAGCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: MNQAHSNIICWDSVIFKNIFAFF*MCFSKG Trigger: GCCTTTGCTGAAGCACATCAAAAAGAAGGCAAAGAT...GTTCTTAAAAATCACAGAATCCCAACAGATAATGTTACTGTGTGCCTGATTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | ATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATCCAAGGTTGATGACAAAACCTaGTTCTGTAGGTCAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: IYSYIPVIYLATRHCLSKVDDKT*FCRSKM Trigger: CATCTTTGACCTACAGAACAAGGTTTTGTCATCAAC...CTTGGATAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | AAAATTCTAGAAACCTATTCTAGTTCTCCTTTTGAGTCTCAAGTGCCAACTGGTTTGATAAGACCTCTGTaGATGACAAAACCTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KILETYSSSPFESQVPTGLIRPL*MTKPCS Trigger: AGAACAAGGTTTTGTCATCAACAGAGGTCTTATCAA...ACCAGTTGGCACTTGAGACTCAAAAGGAGAACTAGAATAGGTTTCTAGAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101341.9 |
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| CDS-3UTR CAA 90 bp | GTAAAATGGTGGCATGTTTATACAACAAGAGCAATAAATGCCATTAAAGGAGTGGGAAAGGGTATGTATTaGGAAGATCTCTCATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: VKWWHVYTTRAINAIKGVGKGMY*EDLSCH Trigger: ATGACATGAGAGATCTTCCAAATACATACCCTTTCC...CACTCCTTTAATGGCATTTATTGCTCTTGTTGTATAAACATGCCACCATTTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | ATGACCACCTATCATTCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCATTGATAAGACCTCTGTaGATGACAAAACCTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: MTTYHSEIYSYIPVIYLALIRPL*MTKPCS Trigger: AGAACAAGGTTTTGTCATCAACAGAGGTCTTATCAA...TGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGAATGATAGGTGGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGATTTATAGCTACATCCCTGTAATCTATTTAGCAACAAGGCATTGTCTATTATCCTCTTTCTCTTaGAGTTTTTCATCGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SEIYSYIPVIYLATRHCLLSSFS*SFSSQR Trigger: TCTCTGCGATGAAAAACTCAAAGAGAAAGAGGATAA...TAGACAATGCCTTGTTGCTAAATAGATTACAGGGATGTAGCTATAAATCTCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 |
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| CDS TCA 72 bp | CACCAGCCGACTCTTCGTCGCTGTCTGTGTCGGACATaGCGACGGAAGGGCTACCGCCACCCTTGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: HQPTLRRCLCRT*RRKGYRHPCPA Trigger: TGCAGGACAAGGGTGGCGGTAGCCCTTCCGTCGTCATGTCCGACACAGACAGCGACGAAGAGTCGGCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
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| CDS CAA 72 bp | ACGCTTTCGCCTTCCAACTGCCCTGCTCCATTGATGTaGCCGAACAGGAACCCAGTTAGAGAAAATGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TLSPSNCPAPLM*PNRNPVRENGP Trigger: AGGCCCATTTTCTCTAACTGGGTTCCTGTTCGGCAACATCAATGGAGCAGGGCAGTTGGAAGGCGAAAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
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| CDS GCA 72 bp | ACTTCTAATTCCACTGAGCACTCCTCTTCCTGGACCTaGCCTTCCTGTATAAGCTCACGGTGCTTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSNSTEHSSSWT*PSCISSRCFFF Trigger: GAAAAAGAAGCACCGTGAGCTTATACAGGAAGGGCAGGTCCAGGAAGAGGAGTGCTCAGTGGAATTAGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
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| CDS CCA 72 bp | AAGGGCTGCCGTAATTCTACAGCTGGAATTGAGTGCTaGATAATATTTCCTCCAAAAGTACCTCGAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KGCRNSTAGIEC*IIFPPKVPRRP Trigger: GGGCCTTCGAGGTACTTTTGGAGGAAATATTATCCAGCACTCAATTCCAGCTGTAGAATTACGGCAGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 ENSMUST00000143908.8 ENSMUST00000149274.9 |
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| CDS CAA 72 bp | ACTACTGAAGTCCACTTTCTCACCAGTAATATCATCTaGGTCCTTCTCTTTCTTCAGTGGTCCTGGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TTEVHFLTSNII*VLLFLQWSWGW Trigger: CCACCCCCAGGACCACTGAAGAAAGAGAAGGACCAAGATGATATTACTGGTGAGAAAGTGGACTTCAGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101341.9 ENSMUST00000118878.8 |
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