Pregenerated sensors for TADA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048930Ensembl transcript IDs: ENSMUST00000032410.14, ENSMUST00000043333.9, ENSMUST00000099118.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGCAGTAGGGCCTTGCATACTGGCTGCACAAAGCTCAGCTGGGTaGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: GAVGPCILAAQSSAG*PESVSALRLLSFDR Trigger: CCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTGTGCAGCCAGTATGCAAGGCCCTACTGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR TCA 90 bp | TGGCTGCACAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTaGGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: WLHKAQLGGLRVFQP*DCCHLIGSLWPRLQ Trigger: TTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTGTGCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR-3UTR GCA 90 bp | CGACACACAGGGACATCTGGGACAAGGCCATGGCCAGCTGGCTTTAGGTTTTCCGATGTTGTGGACTTCTaGCAGGCCAGGGGGATAGCC | + |
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Preference number: 2 (lower is better) Translates to: RHTGTSGTRPWPAGFRFSDVVDF*QARGIA Trigger: GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATC...GGAAAACCTAAAGCCAGCTGGCCATGGCCTTGTCCCAGATGTCCCTGTGTGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| 3UTR-3UTR GCA 90 bp | CAATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAACTAAACCCTTCCACCTaGCTGTTCTTCCTACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QSCPRKPGTHPPTTRPSELNPST*LFFLPH Trigger: GTGGGGTAGGAAGAACAGGCAGGTGGAAGGGTTTAG...TTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| 3UTR-3UTR GCA 90 bp | CAATTTGGGCTTAGAAACGACACACAGGGACATCTGGGACAAGGCCATGGCCAGCGGAGACCCCAAGCATaGCCCACTAAACCCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QFGLRNDTQGHLGQGHGQRRPQA*PTKPFH Trigger: GTGGAAGGGTTTAGTGGGGCATGCTTGGGGTCTCCG...CTGGCCATGGCCTTGTCCCAGATGTCCCTGTGTGTCGTTTCTAAGCCCAAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAGATGTTGTGGACTTCTaGCAGGCCAGGGGGATAGCC | + |
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Preference number: 2 (lower is better) Translates to: VSALRLLSFDRQPLAKASDVVDF*QARGIA Trigger: GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATC...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR CAA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTaGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTT | + |
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Preference number: 2 (lower is better) Translates to: QSSAGWPESVSALRL*SFDRQPLAKASKDV Trigger: AACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGCAAAGCTCAGCTGGGTaGCCTGAGAGTGTTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: KFVHYKTSRKKSLRRGVEQSSAG*PESVSA Trigger: GGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR CAA 90 bp | CTGCGAAAGGGTTATTCTAGTCCCAAAAGGGTCATGACCCACAGGTaGACAACCACTGCAGTAAAAGATCCCTTAACCCAAGAGATTGTG | + |
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Preference number: 2 (lower is better) Translates to: LRKGYSSPKRVMTHR*TTTAVKDPLTQEIV Trigger: CACAATCTCTTGGGTTAAGGGATCTTTTACTGCAGTGGTTGTCAACCTGTGGGTCATGACCCTTTTGGGACTAGAATAACCCTTTCGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGTTGATAGGCAGCCTCTaGCCAAGGCTTCAAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: KFVHYKTSRKKSLRRGVELIGSL*PRLQRM Trigger: CATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAA...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTCAAAGCTCAGCTGGGTaGCCTGAGAGTGTTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGQSSAG*PESVSA Trigger: GGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR TCA 72 bp | AGACATCCCAGTGATAGCTGGCATGGAAGAAACACCTaGGGGAACAGGTCCTTGGTGGCCCCGTGCAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: RHPSDSWHGRNT*GNRSLVAPCSS Trigger: GCTACTGCACGGGGCCACCAAGGACCTGTTCCCTCAGGTGTTTCTTCCATGCCAGCTATCACTGGGATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| 3UTR CCA 72 bp | GGGCCTTGCATACTGGCTGCACAAAGCTCAGCTGGGTaGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: GPCILAAQSSAG*PESVSALRLLS Trigger: TGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTGTGCAGCCAGTATGCAAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| 3UTR GCA 72 bp | GCTGGCTTTAGGTTTTCCTCAGTGACAGACCCTGTCTaGCACCCACAGCTGAAGAGACATCCCAGTGATAGC | + |
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Preference number: 3 (lower is better) Translates to: AGFRFSSVTDPV*HPQLKRHPSDS Trigger: GCTATCACTGGGATGTCTCTTCAGCTGTGGGTGGCAGACAGGGTCTGTCACTGAGGAAAACCTAAAGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| 3UTR GCA 72 bp | TCCCAAAAGGGTCATGACCCACAGGTTGACAACCACTaGAGTAAAAGATCCCTTAACCCAAGAGATTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SQKGHDPQVDNH*SKRSLNPRDCA Trigger: AGCACAATCTCTTGGGTTAAGGGATCTTTTACTGCAGTGGTTGTCAACCTGTGGGTCATGACCCTTTTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS-3UTR GCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGGCCATGCGGACCCGCTaGCTTAGCTCCTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQAAMRTR*LSSCRL Trigger: GAGCCGGCAGGAGCTAAGGCAGCGGGTCCGCATGGC...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGTCCCGGGCCAGGGCCTaGCCCATGTCCTGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQASRARA*PMSCLP Trigger: GGGAAGACAGGACATGGGCCAGGCCCTGGCCCGGGA...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS-3UTR GCA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATTGCGCGGGGAGGTaGTCGCTCCATCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AASGQGFKGCCGLLPGQGDCAGR*SLHLPL Trigger: CAGGGGCAGATGGAGCGAGCACCTCCCCGCGCAATC...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGGGGGTGCGCTTCTTCTaGCGGGCAGCCATGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQAGVRFF*RAAMIF Trigger: GAAGATCATGGCTGCCCGGCAGAAGAAGCGCACCCC...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CCA 90 bp | ACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGCAGTGACTCCAGGAGGCCCTaGGCAATCAGCTCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TSPLIWGIRRMLGPGRRSDSRRP*AISSSL Trigger: CAAGGAGGAGCTGATTGCCCAGGGCCTCCTGGAGTC...ACTGCGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGGACTCCAGGAGGCCCTaGGCAATCAGCTCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQADSRRP*AISSSL Trigger: CAAGGAGGAGCTGATTGCCCAGGGCCTCCTGGAGTC...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGGCTCACCTCCTCCTTTaGCAGCCTCAGCAGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQAAHLLL*QPQQVM Trigger: CATGACCTGCTGAGGCTGGCAAAGGAGGAGGTGAGC...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGTCTGCCGGGCAGCCATaGTCTTCCGGAAGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGSAGQP*SSGRHP Trigger: TGGATGCCTTCCGGAAGATCATGGCTGCCCGGCAGA...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCTCCTCCACTAGGGCCTaGAGCAGGCGCTGTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIASSTRA*SRRCVR Trigger: CCTGACACAGCGCCTGCTGCAGGCCCTAGTGGAGGA...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCGCCATGCGGACCCGCTaGCTTAGCTCCTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PGNQEPTLLPPDPQKLELAMRTR*LSSCRL Trigger: GAGCCGGCAGGAGCTAAGGCAGCGGGTCCGCATGGC...GAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS-3UTR GCA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGCTTCGTTGTCGGCCATaGGGACCCGCTGCCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: AASGQGFKGCCGLLPGQGLRCRP*GPAALA Trigger: AGCTAAGGCAGCGGGTCCGCATGGCCGACAACGAAG...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGCTAGGAGCTTCAGGATaGTTTCCCGCTCCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQALGASG*FPAPSG Trigger: CCCTGAAGGAGCGGGAAAGCATCCTGAAGCTCCTAG...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCGGAGCGGGCCAGCACTaGCGTGTAGCGGGGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: PESVSALRLLSFDRQPLAGAGQH*RVAGTD Trigger: GTCTGTCCCCGCTACACGGCAGTGCTGGCCCGCTCC...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS-3UTR GCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGAAGGCTTGTTCTGATTaGGCGGGGAGGTGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGKACSD*AGRCSL Trigger: GAGCGAGCACCTCCCCGCGCAATCAGAACAAGCCTT...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGGCTCAGCTTGCCGTTTaGGCAGCTCAGCAAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGAQLAV*AAQQGP Trigger: AGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGC...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGGCTCACCTCCTCCTTTaGCAGCCTCAGCAGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGAHLLL*QPQQVM Trigger: CATGACCTGCTGAGGCTGGCAAAGGAGGAGGTGAGC...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCTCCCGGGCCAGGGCCTaGCCCATGTCCTGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PESVSALRLLSFDRQPLASRARA*PMSCLP Trigger: GGGAAGACAGGACATGGGCCAGGCCCTGGCCCGGGA...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS-3UTR CCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCGGGACACCCGTCTTCTaGCTGTTCATGCTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIAGTPVF*LFMLGL Trigger: GAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCC...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCCTGAAAGGCTTGTTCTaGTTGCGCGGGGAGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIALKGLF*LRGEVL Trigger: GAGCACCTCCCCGCGCAATCAGAACAAGCCTTTCAG...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGTCTTCTGGCTGTTCATaGTGGGCCTCAGACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQASSGCS*WASDFF Trigger: GAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGA...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCTCCTCCACTAGGGCCTaGAGCAGGCGCTGTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGNQEPTLLPPDPQKLELSSTRA*SRRCVR Trigger: CCTGACACAGCGCCTGCTGCAGGCCCTAGTGGAGGA...GAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS-3UTR GCA 90 bp | ATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATCGCTGCCTTAGCTCCTaGCGGCTCACCTCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ILPQETRNPPSYHQTLRNRCLSS*RLTSSF Trigger: AAAGGAGGAGGTGAGCCGGCAGGAGCTAAGGCAGCG...ATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS-3UTR TCA 90 bp | ACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGCAGTTGGTATGTGGCACACTaGAAGGCTTGTTCTGATTGC | + |
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Preference number: 4 (lower is better) Translates to: TSPLIWGIRRMLGPGRRSWYVAH*KACSDC Trigger: GCAATCAGAACAAGCCTTTCAGTGTGCCACATACCA...ACTGCGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CGACACACAGGGACATCTGGGACAAGGCCATGGCCAGCTGGCTTTAGGTTTTCCGTCTCAAGCTCCAGCTaGAGGGTGTCCAGCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RHTGTSGTRPWPAGFRFSVSSSS*RVSSSS Trigger: TGAGGAGCTGGACACCCTGCAGCTGGAGCTTGAGAC...GGAAAACCTAAAGCCAGCTGGCCATGGCCTTGTCCCAGATGTCCCTGTGTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS-3UTR GCA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATTGCGCGGGGAGGTaGTCGCTCCATCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QSSAGWPESVSALRLLSFDCAGR*SLHLPL Trigger: CAGGGGCAGATGGAGCGAGCACCTCCCCGCGCAATC...AAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | CAATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAGCTTTCAGCTCAGCTTaGCGTTTGCGCAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QSCPRKPGTHPPTTRPSEAFSSA*RLRSSA Trigger: TGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGC...TTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS-3UTR GCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGCTTGGTGCGGTTGTGTaGACTGAGTGCTTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGLGAVV*TECFQL Trigger: GAGCTGAAAGCACTCAGTGCACACAACCGCACCAAG...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGGCCATGCGGACCCGCTaGCTTAGCTCCTGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWAMRTR*LSSCRL Trigger: GAGCCGGCAGGAGCTAAGGCAGCGGGTCCGCATGGC...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CCA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGCCAGTTTCTGCTTCTTaGGCTTTCCGTGTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AASGQGFKGCCGLLPGQGPVSAS*AFRVWG Trigger: CCCCCAAACACGGAAAGCCCAAGAAGCAGAAACTGG...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGAGGCCCAGAACCTGTTaGGAGCATCATTCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AASGQGFKGCCGLLPGQGRPRTC*EHHSWG Trigger: TCCCCAAGAATGATGCTCCCAACAGGTTCTGGGCCT...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGAGGGTCTTCCAGGCCTaGTCCTTTTCCTTCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNKPAHLGHQADARSRQARVFQA*SFSFFV Trigger: TACAAAGAAGGAAAAGGACCAGGCCTGGAAGACCCT...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCTGCGGTTGTGTGCACTaGGTGCTTTCAGCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIACGCVH*VLSAQL Trigger: AAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCA...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGGAGCGGGCCAGCACTaGCGTGTAGCGGGGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSLWPRLQRMLWTSGAGQH*RVAGTD Trigger: GTCTGTCCCCGCTACACGGCAGTGCTGGCCCGCTCC...AGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCAGCAGCTGTCCAGCTCCTCAATaGCAATGCCATCGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KASKDVVDFCQARGIASSCPAPQ*QCHRPR Trigger: CCGAGGACGATGGCATTGGCATTGAGGAGCTGGACA...GCTGCTGGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTCGAGCGCCGTCCTTCTaGTCCTCCAGCAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSAGWPESVSALRLLSFRAPSF*SSSRSS Trigger: GGAGGATCTGCTGGAGGAGCAGAAGGACGGCGCTCG...AAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCACTTGTCAGCCACAGCTaGTGCCCGAGCGCCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSALRLLSFDRQPLAKASLVSHS*CPSAVL Trigger: AAGGACGGCGCTCGGGCAGCAGCTGTGGCTGACAAG...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGTCTTCTGGCTGTTCATaGTGGGCCTCAGACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGSSGCS*WASDFF Trigger: GAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGA...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCAGCCTCAGCAGGTCATaGTTCTTGGTGCGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIASLSRS*FLVRLC Trigger: ACACAACCGCACCAAGAAGCATGACCTGCTGAGGCT...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCAGCAGCCTAGGAGCTTCAGGATaGTTTCCCGCTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KASKDVVDFCQARGIASSLGASG*FPAPSG Trigger: CCCTGAAGGAGCGGGAAAGCATCCTGAAGCTCCTAG...GCTGCTGGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCACGCAGTCTCCGGCTTaGAGAGGACAGCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PESVSALRLLSFDRQPLATQSPA*RGQQSL Trigger: GAGACTCTGCTGTCCTCTGCAAGCCGGAGACTGCGT...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGCGCTGCCTTAGCTCCTaGCGGCTCACCTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SALRLLSFDRQPLAKASKRCLSS*RLTSSF Trigger: AAAGGAGGAGGTGAGCCGGCAGGAGCTAAGGCAGCG...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGGACGTTTTTGGATTTaGGTCGTCCCGGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSAGWPESVSALRLLSFGRFWI*VVPGQG Trigger: GCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCC...AAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAGGGACACCCGTCTTCTaGCTGTTCATGCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSALRLLSFDRQPLAKASGTPVF*LFMLGL Trigger: GAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCC...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGGGACACCCGTCTTCTaGCTGTTCATGCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SALRLLSFDRQPLAKASKGTPVF*LFMLGL Trigger: GAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCC...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGAGGGTCTTCCAGGCCTaGTCCTTTTCCTTCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AASGQGFKGCCGLLPGQGRVFQA*SFSFFV Trigger: TACAAAGAAGGAAAAGGACCAGGCCTGGAAGACCCT...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGAGGGTCTTCCAGGCCTaGTCCTTTTCCTTCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGRVFQA*SFSFFV Trigger: TACAAAGAAGGAAAAGGACCAGGCCTGGAAGACCCT...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| 3UTR CAA 72 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTaGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGWPESVSALRL*SFDRQPLAKAS Trigger: TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | CGACACACAGGGACATCTGGGACAAGGCCATGGCCAGCTGGCTTTAGGTTTTCCCTGTCAGTGGTCCTATaGGGCCTTTCTTCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHTGTSGTRPWPAGFRFSLSVVL*GLSSCQ Trigger: CTGACAAGAAGAAAGGCCTCATAGGACCACTGACAG...GGAAAACCTAAAGCCAGCTGGCCATGGCCTTGTCCCAGATGTCCCTGTGTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGCTGAAAGGCTTGTTCTaGTTGCGCGGGGAGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SALRLLSFDRQPLAKASKLKGLF*LRGEVL Trigger: GAGCACCTCCCCGCGCAATCAGAACAAGCCTTTCAG...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCTCCCCTTTCTTATCCTaGCAGTCAGTAAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIASPFLS*QSVRIW Trigger: CCAGATCCTTACTGACTGGCAGGATAAGAAAGGGGA...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTCTTGTCAGCCACAGCTaGTGCCCGAGCGCCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSLWPRLQRMLWTSLVSHS*CPSAVL Trigger: AAGGACGGCGCTCGGGCAGCAGCTGTGGCTGACAAG...AGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGCTTGTTCTGATTaGGCGGGGAGGTGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSALRLLSFDRQPLAKASKACSD*AGRCSL Trigger: GAGCGAGCACCTCCCCGCGCAATCAGAACAAGCCTT...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGCTTCGTTGTCGGCCATaGGGACCCGCTGCCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWLRCRP*GPAALA Trigger: AGCTAAGGCAGCGGGTCCGCATGGCCGACAACGAAG...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGCAGTCAGTAAGGATCTaGGTTTCAGCTTCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QPLAKASKDVVDFCQARGQSVRI*VSASST Trigger: TGTACTGGAAGCTGAAACCCAGATCCTTACTGACTG...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGGGACGTTTTTGGATTTaGGTCGTCCCGGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWGRFWI*VVPGQG Trigger: GCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCC...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGCCGAGGCACGTCGATTaGGTCATCAGTAAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: AASGQGFKGCCGLLPGQGPRHVD*VISKFI Trigger: TATGAATTTACTGATGACCCAATCGACGTGCCTCGG...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCGTCCAGTTCTGTCAGTaGTCCTATGAGGCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAKASKDVVDFCQARGIAVQFCQ*SYEAFL Trigger: AAGAAAGGCCTCATAGGACCACTGACAGAACTGGAC...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGCGCTCCATCTGCCCCTaGCTCTTTCCCAGACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWRSICP*LFPRHV Trigger: GACATGTCTGGGAAAGAGTCAGGGGCAGATGGAGCG...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTTCTGCCGGGCAGCCATaGTCTTCCGGAAGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTLQNLKEEVPEERCGDGSAGQP*SSGRHP Trigger: TGGATGCCTTCCGGAAGATCATGGCTGCCCGGCAGA...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGTGTCCAGCTCCTCAATaGCAATGCCATCGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SALRLLSFDRQPLAKASKCPAPQ*QCHRPR Trigger: CCGAGGACGATGGCATTGGCATTGAGGAGCTGGACA...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGCTTTCAGCTCAGCTTaGCGTTTGCGCAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSAGWPESVSALRLLSFAFSSA*RLRSSA Trigger: TGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGC...AAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGGTTGTGTGCACTGAGTaGTTTCAGCTCAGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGWPESVSALRLLSFDRQVVCTE*FQLSLP Trigger: CGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAAC...CTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTGGGGTGCGCTTCTTCTaGCGGGCAGCCATGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTLQNLKEEVPEERCGDGGVRFF*RAAMIF Trigger: GAAGATCATGGCTGCCCGGCAGAAGAAGCGCACCCC...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCGGACAGACCTTCAGGTaGTCCACAGACTTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGNQEPTLLPPDPQKLELGQTFR*STDLKS Trigger: TGACTTCAAGTCTGTGGACCACCTGAAGGTCTGTCC...GAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCATGGGAGCATCATTCTTaGGGATCCGAGGCACGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSALRLLSFDRQPLAKASWEHHS*GSEARR Trigger: TCGACGTGCCTCGGATCCCCAAGAATGATGCTCCCA...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAGGCCCAGAACCTGTTaGGAGCATCATTCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PESVSALRLLSFDRQPLARPRTC*EHHSWG Trigger: TCCCCAAGAATGATGCTCCCAACAGGTTCTGGGCCT...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTGACTCCAGGAGGCCCTaGGCAATCAGCTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTLQNLKEEVPEERCGDGDSRRP*AISSSL Trigger: CAAGGAGGAGCTGATTGCCCAGGGCCTCCTGGAGTC...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTCTGAAAGGCTTGTTCTaGTTGCGCGGGGAGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTLQNLKEEVPEERCGDGLKGLF*LRGEVL Trigger: GAGCACCTCCCCGCGCAATCAGAACAAGCCTTTCAG...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCATGCCCCACTAAACCCTTCCACCTGCCTGTTCTTCCTACCCCACAAATATGCGGTTGTGTGCACTaGGTGCTTTCAGCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QACPTKPFHLPVLPTPQICGCVH*VLSAQL Trigger: AAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCA...TATTTGTGGGGTAGGAAGAACAGGCAGGTGGAAGGGTTTAGTGGGGCATGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCATGCGGTTGTGTGCACTaGGTGCTTTCAGCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSALRLLSFDRQPLAKASCGCVH*VLSAQL Trigger: AAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCA...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTACGCAGTCTCCGGCTTaGAGAGGACAGCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSLWPRLQRMLWTSTQSPA*RGQQSL Trigger: GAGACTCTGCTGTCCTCTGCAAGCCGGAGACTGCGT...AGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCTCCCCTTTCTTATCCTaGCAGTCAGTAAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGNQEPTLLPPDPQKLELSPFLS*QSVRIW Trigger: CCAGATCCTTACTGACTGGCAGGATAAGAAAGGGGA...GAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGCGAGCGCCGTCCTTCTaGTCCTCCAGCAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFVHYKTSRKKSLRRGVERAPSF*SSSRSS Trigger: GGAGGATCTGCTGGAGGAGCAGAAGGACGGCGCTCG...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCGTCCAGTTCTGTCAGTaGTCCTATGAGGCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGNQEPTLLPPDPQKLELVQFCQ*SYEAFL Trigger: AAGAAAGGCCTCATAGGACCACTGACAGAACTGGAC...GAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCTTTCAGCTCAGCTTaGCGTTTGCGCAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSLWPRLQRMLWTSAFSSA*RLRSSA Trigger: TGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGC...AGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | GAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCAAAAATAAATGTCTTCGTTGTCGGCCATaGGGACCCGCTGCCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLPPDPQKLELKNKCLRCRP*GPAALA Trigger: AGCTAAGGCAGCGGGTCCGCATGGCCGACAACGAAG...ACATTTATTTTTGAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR GCA 90 bp | GAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCAAAAATAAATGTGGGGTGCGCTTCTTCTaGCGGGCAGCCATGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLPPDPQKLELKNKCGVRFF*RAAMIF Trigger: GAAGATCATGGCTGCCCGGCAGAAGAAGCGCACCCC...ACATTTATTTTTGAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCAGGGACTTGGTATGTaGCACACTGAAAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGWPESVSALRLLSFDRQQGLGM*HTERLV Trigger: AACAAGCCTTTCAGTGTGCCACATACCAAGTCCCTG...CTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCATGCCCCACTAAACCCTTCCACCTGCCTGTTCTTCCTACCCCACAAATAACAGACTTGAAGTCATaGAACTGCAGTGGACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QACPTKPFHLPVLPTPQITDLKS*NCSGQS Trigger: GGACTGTCCACTGCAGTTTCATGACTTCAAGTCTGT...TATTTGTGGGGTAGGAAGAACAGGCAGGTGGAAGGGTTTAGTGGGGCATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGACAGACTTGAAGTCATaGAACTGCAGTGGACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SALRLLSFDRQPLAKASKTDLKS*NCSGQS Trigger: GGACTGTCCACTGCAGTTTCATGACTTCAAGTCTGT...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR TCA 90 bp | GAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCAAAAATAAATGTCGCTCCATCTGCCCCTaGCTCTTTCCCAGACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLPPDPQKLELKNKCRSICP*LFPRHV Trigger: GACATGTCTGGGAAAGAGTCAGGGGCAGATGGAGCG...ACATTTATTTTTGAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR GCA 90 bp | GAACCCACCCTCCTACCACCAGACCCTCAGAAATTAGAGCTCAAAAATAAATGTAAGGCTTGTTCTGATTaGGCGGGGAGGTGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLPPDPQKLELKNKCKACSD*AGRCSL Trigger: GAGCGAGCACCTCCCCGCGCAATCAGAACAAGCCTT...ACATTTATTTTTGAGCTCTAATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGTTGTGTGCACTGAGTaGTTTCAGCTCAGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSLWPRLQRMLWTSVVCTE*FQLSLP Trigger: CGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAAC...AGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGGGACAGACCTTCAGGTaGTCCACAGACTTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWGQTFR*STDLKS Trigger: TGACTTCAAGTCTGTGGACCACCTGAAGGTCTGTCC...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCTCCTGGATCTTGGGTTaGACGTTTTTGGATTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PESVSALRLLSFDRQPLASWILG*TFLDLG Trigger: ACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGA...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATCATATTCCTGGATCTTaGGTTGGACGTTTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ILPQETRNPPSYHQTLRNHIPGS*VGRFWI Trigger: AATCCAAAAACGTCCAACCCAAGATCCAGGAATATG...ATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCGAGGCACGTCGATTaGGTCATCAGTAAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: AGWPESVSALRLLSFDRQPRHVD*VISKFI Trigger: TATGAATTTACTGATGACCCAATCGACGTGCCTCGG...CTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCACAGGGACTTGGTATGTaGCACACTGAAAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSALRLLSFDRQPLAKASQGLGM*HTERLV Trigger: AACAAGCCTTTCAGTGTGCCACATACCAAGTCCCTG...TGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGGTGGTCCACAGACTTaGAGTCATGAAACTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSLWPRLQRMLWTSGGPQT*SHETAV Trigger: CACTGCAGTTTCATGACTTCAAGTCTGTGGACCACC...AGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTCGAGCGCCGTCCTTCTaGTCCTCCAGCAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGRAPSF*SSSRSS Trigger: GGAGGATCTGCTGGAGGAGCAGAAGGACGGCGCTCG...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGTGGGAGCATCATTCTTaGGGATCCGAGGCACGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KFVHYKTSRKKSLRRGVEWEHHS*GSEARR Trigger: TCGACGTGCCTCGGATCCCCAAGAATGATGCTCCCA...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS-3UTR CCA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGCAGGGACTTGGTATGTaGCACACTGAAAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWQGLGM*HTERLV Trigger: AACAAGCCTTTCAGTGTGCCACATACCAAGTCCCTG...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR TCA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTTGGTATGTGGCACACTaGAAGGCTTGTTCTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTLQNLKEEVPEERCGDGWYVAH*KACSDC Trigger: GCAATCAGAACAAGCCTTTCAGTGTGCCACATACCA...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGCTTGGTGCGGTTGTGTaGACTGAGTGCTTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFVHYKTSRKKSLRRGVELGAVV*TECFQL Trigger: GAGCTGAAAGCACTCAGTGCACACAACCGCACCAAG...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTCGCTGCCTTAGCTCCTaGCGGCTCACCTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGRCLSS*RLTSSF Trigger: AAAGGAGGAGGTGAGCCGGCAGGAGCTAAGGCAGCG...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR TCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGGGTGGTCCACAGACTTaGAGTCATGAAACTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFVHYKTSRKKSLRRGVEGGPQT*SHETAV Trigger: CACTGCAGTTTCATGACTTCAAGTCTGTGGACCACC...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS-3UTR TCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTCGCTCCATCTGCCCCTaGCTCTTTCCCAGACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGRSICP*LFPRHV Trigger: GACATGTCTGGGAAAGAGTCAGGGGCAGATGGAGCG...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGCTCAGCTTGCCGTTTaGGCAGCTCAGCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGAQLAV*AAQQGP Trigger: AGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGC...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CCA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTCAGTCAGTAAGGATCTaGGTTTCAGCTTCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CTLQNLKEEVPEERCGDGQSVRI*VSASST Trigger: TGTACTGGAAGCTGAAACCCAGATCCTTACTGACTG...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTCATATTCCTGGATCTTaGGTTGGACGTTTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QSSAGWPESVSALRLLSFHIPGS*VGRFWI Trigger: AATCCAAAAACGTCCAACCCAAGATCCAGGAATATG...AAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTCTAGGAGCTTCAGGATaGTTTCCCGCTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGLGASG*FPAPSG Trigger: CCCTGAAGGAGCGGGAAAGCATCCTGAAGCTCCTAG...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGGTCCAGTTCTGTCAGTaGTCCTATGAGGCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KFVHYKTSRKKSLRRGVEVQFCQ*SYEAFL Trigger: AAGAAAGGCCTCATAGGACCACTGACAGAACTGGAC...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| 3UTR CAA 72 bp | GGTTATTCTAGTCCCAAAAGGGTCATGACCCACAGGTaGACAACCACTGCAGTAAAAGATCCCTTAACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GYSSPKRVMTHR*TTTAVKDPLTQ Trigger: TTGGGTTAAGGGATCTTTTACTGCAGTGGTTGTCAACCTGTGGGTCATGACCCTTTTGGGACTAGAATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR GCA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTAGCCTCAGCAGGTCATaGTTCTTGGTGCGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGSLSRS*FLVRLC Trigger: ACACAACCGCACCAAGAAGCATGACCTGCTGAGGCT...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS GCA 90 bp | GAGTCTCAAGCTCCAGCTGCAGGGTGTCCAGCTCCTCAATGCCAATaGCATCGTCCTCGGAGCGGGCCAGCACTGCCGTGTAGCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESQAPAAGCPAPQCQ*HRPRSGPALPCSGD Trigger: GTCCCCGCTACACGGCAGTGCTGGCCCGCTCCGAGGACGATGGCATTGGCATTGAGGAGCTGGACACCCTGCAGCTGGAGCTTGAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS GCA 90 bp | ACAGCAGAGTCTCAAGCTCCAGCTGCAGGGTGTCCAGCTCCTCAATaGCAATGCCATCGTCCTCGGAGCGGGCCAGCACTGCCGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TAESQAPAAGCPAPQ*QCHRPRSGPALPCS Trigger: GCTACACGGCAGTGCTGGCCCGCTCCGAGGACGATGGCATTGGCATTGAGGAGCTGGACACCCTGCAGCTGGAGCTTGAGACTCTGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS GCA 90 bp | CAGCTCCTCAATGCCAATGCCATCGTCCTCGGAGCGGGCCAGCACTaGCGTGTAGCGGGGACAGACCTTCAGGTGGTCCACAGACTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLLNANAIVLGAGQH*RVAGTDLQVVHRLE Trigger: TTCAAGTCTGTGGACCACCTGAAGGTCTGTCCCCGCTACACGGCAGTGCTGGCCCGCTCCGAGGACGATGGCATTGGCATTGAGGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS GCA 90 bp | CGCAGTCTCCGGCTTGCAGAGGACAGCAGAGTCTCAAGCTCCAGCTaGAGGGTGTCCAGCTCCTCAATGCCAATGCCATCGTCCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLRLAEDSRVSSSS*RVSSSSMPMPSSSE Trigger: CTCCGAGGACGATGGCATTGGCATTGAGGAGCTGGACACCCTGCAGCTGGAGCTTGAGACTCTGCTGTCCTCTGCAAGCCGGAGACTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS CCA 90 bp | CTGCAGCAGGCGCTGTGTCAGGGCTCCAAAGGGACACCCGTCTTCTaGCTGTTCATGCTGGGCCTCAGACTTCTTCAGCAGGGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQQALCQGSKGTPVF*LFMLGLRLLQQGIH Trigger: GTGGATGCCCTGCTGAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCCTTTGGAGCCCTGACACAGCGCCTGCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCCACGCAGTCTCCGGCTaGCAGAGGACAGCAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAKASKDVVDFCQARGIAHAVSG*QRTAES Trigger: AGACTCTGCTGTCCTCTGCAAGCCGGAGACTGCGTG...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGTCCAGTTTCTGCTTCTaGGGCTTTCCGTGTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNKPAHLGHQADARSRQASSFCF*GFPCLG Trigger: CCCCAAACACGGAAAGCCCAAGAAGCAGAAACTGGA...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACAAGCCCGCTCATCTGGGGCATCAGGCGGATGCTAGGTCCAGGCAGGCGTGCTTCTTGGTGCGGTaGTGTGCACTGAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNKPAHLGHQADARSRQACFLVR*CALSAF Trigger: GAAAGCACTCAGTGCACACAACCGCACCAAGAAGCA...CGCCTGCCTGGACCTAGCATCCGCCTGATGCCCCAGATGAGCGGGCTTGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS GCA 90 bp | TTCTGTCAGTGGTCCTATGAGGCCTTTCTTCTTGTCAGCCACAGCTaGTGCCCGAGCGCCGTCCTTCTGCTCCTCCAGCAGATCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FCQWSYEAFLLVSHS*CPSAVLLLLQQILL Trigger: CAGGAGGATCTGCTGGAGGAGCAGAAGGACGGCGCTCGGGCAGCAGCTGTGGCTGACAAGAAGAAAGGCCTCATAGGACCACTGACAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCAGCAGCTGGACGTTTTTGGATTaGGGTCGTCCCGGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KASKDVVDFCQARGIASSWTFLD*GRPGPG Trigger: CCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCA...GCTGCTGGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGTTGGGTTGGACGTTTTaGGATTTGGGTCGTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPLAKASKDVVDFCQARGLGWTF*DLGRPG Trigger: CCCGGGACGACCCAAATCCAAAAACGTCCAACCCAA...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGATGAGGCCTTTCTTCTaGTCAGCCACAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AASGQGFKGCCGLLPGQGMRPFF*SATAAA Trigger: GGCAGCAGCTGTGGCTGACAAGAAGAAAGGCCTCAT...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGAGCAGGTCATGCTTCTaGGTGCGGTTGTGTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AASGQGFKGCCGLLPGQGSRSCF*VRLCAL Trigger: CAGTGCACACAACCGCACCAAGAAGCATGACCTGCT...CCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS GCA 90 bp | TGCTTCTTGGTGCGGTTGTGTGCACTGAGTGCTTTCAGCTCAGCTTaGCGTTTGCGCAGCTCAGCAAGGACCTCGTCCTCTGAGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLVRLCALSAFSSA*RLRSSARTSSSESS Trigger: GGAGGACTCAGAGGACGAGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCACCAAGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS CCA 90 bp | GTCCTGTCTTCCCTTCCAGTTTCTGCTTCTTGGGCTTTCCGTGTTTaGGGGGAGCACCGAGCTCGTGGTCGCGACCTAGCTTCAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: VLSSLPVSASWAFRV*GEHRARGRDLASGI Trigger: GATTCCTGAAGCTAGGTCGCGACCACGAGCTCGGTGCTCCCCCCAAACACGGAAAGCCCAAGAAGCAGAAACTGGAAGGGAAGACAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | CGACACACAGGGACATCTGGGACAAGGCCATGGCCAGCTGGCTTTAGGTTTTCCTGCTTTCAGCTCAGCTaGCCGTTTGCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHTGTSGTRPWPAGFRFSCFQLS*PFAQLS Trigger: GCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCA...GGAAAACCTAAAGCCAGCTGGCCATGGCCTTGTCCCAGATGTCCCTGTGTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS TCA 90 bp | GCAGGGCATCCACATCTTTTGTGTCCAGTTCTGTCAGTGGTCCTATaGGGCCTTTCTTCTTGTCAGCCACAGCTGCTGCCCGAGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGHPHLLCPVLSVVL*GLSSCQPQLLPERR Trigger: ACGGCGCTCGGGCAGCAGCTGTGGCTGACAAGAAGAAAGGCCTCATAGGACCACTGACAGAACTGGACACAAAAGATGTGGATGCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS GCA 90 bp | CGCTGTGTCAGGGCTCCAAAGGGACACCCGTCTTCTGGCTGTTCATaGTGGGCCTCAGACTTCTTCAGCAGGGCATCCACATCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCVRAPKGHPSSGCS*WASDFFSRASTSFV Trigger: CACAAAAGATGTGGATGCCCTGCTGAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCCTTTGGAGCCCTGACACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATATGAGGCCTTTCTTCTaGTCAGCCACAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILPQETRNPPSYHQTLRNMRPFF*SATAAA Trigger: GGCAGCAGCTGTGGCTGACAAGAAGAAAGGCCTCAT...ATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCAGCAGCATGAGGCCTTTCTTCTaGTCAGCCACAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KASKDVVDFCQARGIASSMRPFF*SATAAA Trigger: GGCAGCAGCTGTGGCTGACAAGAAGAAAGGCCTCAT...GCTGCTGGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGGGGCATCCACATCTTTaGTGTCCAGTTCTGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPLAKASKDVVDFCQARGGHPHL*CPVLSV Trigger: CACTGACAGAACTGGACACAAAAGATGTGGATGCCC...CCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAGAGGCTG 57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGGCAATCAGCTCCTCCTaGATGCGGCTCTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGWPESVSALRLLSFDRQAISSS*MRLSRD Trigger: GTCCCTGGAGAGCCGCATCAAGGAGGAGCTGATTGC...CTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGAGCTCAGCTTGCCGTTaGCGCAGCTCAGCAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AGWPESVSALRLLSFDRQSSACR*RSSART Trigger: GGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCT...CTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCTGCTTCTTGGTGCGGTaGTGTGCACTGAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAKASKDVVDFCQARGIACFLVR*CALSAF Trigger: GAAAGCACTCAGTGCACACAACCGCACCAAGAAGCA...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAAAGCAGGTCATGCTTCTaGGTGCGGTTGTGTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: NPAPGNQEPTLLPPDPQKSRSCF*VRLCAL Trigger: CAGTGCACACAACCGCACCAAGAAGCATGACCTGCT...TTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS GCA 90 bp | TTCCAGGCCTGGTCCTTTTCCTTCTTTGTAGGGGTGCGCTTCTTCTaGCGGGCAGCCATGATCTTCCGGAAGGCATCCATGACTTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQAWSFSFFVGVRFF*RAAMIFRKASMTSL Trigger: CAACGAAGTCATGGATGCCTTCCGGAAGATCATGGCTGCCCGGCAGAAGAAGCGCACCCCTACAAAGAAGGAAAAGGACCAGGCCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS CCA 90 bp | TGTGTCAGGGCTCCAAAGGGACACCCGTCTTCTGGCTGTTCATGCTaGGCCTCAGACTTCTTCAGCAGGGCATCCACATCTTTTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVRAPKGHPSSGCSC*ASDFFSRASTSFVS Trigger: GGACACAAAAGATGTGGATGCCCTGCTGAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCCTTTGGAGCCCTGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGCACGCAGTCTCCGGCTaGCAGAGGACAGCAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SALRLLSFDRQPLAKASKHAVSG*QRTAES Trigger: AGACTCTGCTGTCCTCTGCAAGCCGGAGACTGCGTG...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTCCAGTTTCTGCTTCTaGGGCTTTCCGTGTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILPQETRNPPSYHQTLRNSSFCF*GFPCLG Trigger: CCCCAAACACGGAAAGCCCAAGAAGCAGAAACTGGA...ATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCGGGCATCCACATCTTTaGTGTCCAGTTCTGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAKASKDVVDFCQARGIAGHPHL*CPVLSV Trigger: CACTGACAGAACTGGACACAAAAGATGTGGATGCCC...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGCAATCAGCTCCTCCTaGATGCGGCTCTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SALRLLSFDRQPLAKASKAISSS*MRLSRD Trigger: GTCCCTGGAGAGCCGCATCAAGGAGGAGCTGATTGC...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCATGCCCCACTAAACCCTTCCACCTGCCTGTTCTTCCTACCCCACAAATAAGCTCAGCTTGCCGTTaGCGCAGCTCAGCAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QACPTKPFHLPVLPTPQISSACR*RSSART Trigger: GGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCT...TATTTGTGGGGTAGGAAGAACAGGCAGGTGGAAGGGTTTAGTGGGGCATGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS CCA 90 bp | AGGAATCGTCGGTCCCCTTTCTTATCCTGCCAGTCAGTAAGGATCTaGGTTTCAGCTTCCAGTACACGCAGTCTCCGGCTTGCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNRRSPFLSCQSVRI*VSASSTRSLRLAED Trigger: GTCCTCTGCAAGCCGGAGACTGCGTGTACTGGAAGCTGAAACCCAGATCCTTACTGACTGGCAGGATAAGAAAGGGGACCGACGATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCCGGCTCTCCAGGGACTaGGTATGTGGCACACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PESVSALRLLSFDRQPLARLSRD*VCGTLK Trigger: TTTCAGTGTGCCACATACCAAGTCCCTGGAGAGCCG...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCGGCTCTCCAGGGACTaGGTATGTGGCACACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGWPESVSALRLLSFDRQRLSRD*VCGTLK Trigger: TTTCAGTGTGCCACATACCAAGTCCCTGGAGAGCCG...CTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGCTCAGCTGGGTGGCCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTTGCTTTCAGCTCAGCTaGCCGTTTGCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSAGWPESVSALRLLSFCFQLS*PFAQLS Trigger: GCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCA...AAATGACAACAGTCTCAGGGCTGAAACACTCTCAGGCCACCCAGCTGAGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAGCAGGTCATGCTTCTaGGTGCGGTTGTGTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PESVSALRLLSFDRQPLASRSCF*VRLCAL Trigger: CAGTGCACACAACCGCACCAAGAAGCATGACCTGCT...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CCA 90 bp | ACGTCGATTGGGTCATCAGTAAATTCATATTCCTGGATCTTGGGTTaGACGTTTTTGGATTTGGGTCGTCCCGGGCCAGGGCCTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSIGSSVNSYSWILG*TFLDLGRPGPGPGP Trigger: TGGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCAATCGACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGTTGGGTTGGACGTTTTaGGATTTGGGTCGTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SALRLLSFDRQPLAKASKLGWTF*DLGRPG Trigger: CCCGGGACGACCCAAATCCAAAAACGTCCAACCCAA...CTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | GACTGTTGTCATTTGATAGGCAGCCTCTGGCCAAGGCTTCAAAGGATGTTGTGGGAGGCCCAGAACCTGTaGGGAGCATCATTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DCCHLIGSLWPRLQRMLWEAQNL*GASFLG Trigger: CCCCAAGAATGATGCTCCCAACAGGTTCTGGGCCTC...CCACAACATCCTTTGAAGCCTTGGCCAGAGGCTGCCTATCAAATGACAACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCATGCCCCACTAAACCCTTCCACCTGCCTGTTCTTCCTACCCCACAAATACGGCTCTCCAGGGACTaGGTATGTGGCACACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QACPTKPFHLPVLPTPQIRLSRD*VCGTLK Trigger: TTTCAGTGTGCCACATACCAAGTCCCTGGAGAGCCG...TATTTGTGGGGTAGGAAGAACAGGCAGGTGGAAGGGTTTAGTGGGGCATGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS CCA 90 bp | GGGATCCGAGGCACGTCGATTGGGTCATCAGTAAATTCATATTCCTaGATCTTGGGTTGGACGTTTTTGGATTTGGGTCGTCCCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GIRGTSIGSSVNSYS*ILGWTFLDLGRPGP Trigger: TGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCAATCGACGTGCCTCGGATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAAGGCTTCAAAGGATGTTGTGGACTTCTGCCAGGCCAGGGGGATAGCCTCATATTCCTGGATCTaGGGTTGGACGTTTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LAKASKDVVDFCQARGIASYSWI*GWTFLD Trigger: ATCCAAAAACGTCCAACCCAAGATCCAGGAATATGA...GGCTATCCCCCTGGCCTGGCAGAAGTCCACAACATCCTTTGAAGCCTTGGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTGAGGCCCAGAACCTGTaGGGAGCATCATTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTLQNLKEEVPEERCGDGEAQNL*GASFLG Trigger: CCCCAAGAATGATGCTCCCAACAGGTTCTGGGCCTC...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | TGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGACGGTTGCTTTCAGCTCAGCTaGCCGTTTGCGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTLQNLKEEVPEERCGDGCFQLS*PFAQLS Trigger: GCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCA...ACCGTCTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | CAATTTGGGCTTAGAAACGACACACAGGGACATCTGGGACAAGGCCATGGCCAGTTCCTGGATCTTGGGTaGGACGTTTTTGGATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QFGLRNDTQGHLGQGHGQFLDLG*DVFGFG Trigger: CCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAA...CTGGCCATGGCCTTGTCCCAGATGTCCCTGTGTGTCGTTTCTAAGCCCAAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CAA 90 bp | CCTGAGAGTGTTTCAGCCCTGAGACTGTTGTCATTTGATAGGCAGCCTCTGGCCTTCCTGGATCTTGGGTaGGACGTTTTTGGATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PESVSALRLLSFDRQPLAFLDLG*DVFGFG Trigger: CCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAA...GGCCAGAGGCTGCCTATCAAATGACAACAGTCTCAGGGCTGAAACACTCTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCCCCAGGAAACCAGGAACCCACCCTCCTACCACCAGACCCTCAGAAATTCATATTCCTGGATCTaGGGTTGGACGTTTTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILPQETRNPPSYHQTLRNSYSWI*GWTFLD Trigger: ATCCAAAAACGTCCAACCCAAGATCCAGGAATATGA...ATTTCTGAGGGTCTGGTGGTAGGAGGGTGGGTTCCTGGTTTCCTGGGGCAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
||
| CDS-3UTR CAA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGGCAATCAGCTCCTCCTaGATGCGGCTCTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KFVHYKTSRKKSLRRGVEAISSS*MRLSRD Trigger: GTCCCTGGAGAGCCGCATCAAGGAGGAGCTGATTGC...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS CCA 90 bp | GAACCTGTTGGGAGCATCATTCTTGGGGATCCGAGGCACGTCGATTaGGTCATCAGTAAATTCATATTCCTGGATCTTGGGTTGGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPVGSIILGDPRHVD*VISKFIFLDLGLDV Trigger: AACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCAATCGACGTGCCTCGGATCCCCAAGAATGATGCTCCCAACAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTTAAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTAGCTCAGCTTGCCGTTaGCGCAGCTCAGCAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ILKFVHYKTSRKKSLRRGSSACR*RSSART Trigger: GGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCT...ACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTTAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGTGCTTCTTGGTGCGGTaGTGTGCACTGAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KFVHYKTSRKKSLRRGVECFLVR*CALSAF Trigger: GAAAGCACTCAGTGCACACAACCGCACCAAGAAGCA...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTTGTACATTACAAAACCTCAAGGAAGAAGTCCCTGAGGAGAGGTGTGGAGGGGCATCCACATCTTTaGTGTCCAGTTCTGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFVHYKTSRKKSLRRGVEGHPHL*CPVLSV Trigger: CACTGACAGAACTGGACACAAAAGATGTGGATGCCC...CTCCACACCTCTCCTCAGGGACTTCTTCCTTGAGGTTTTGTAATGTACAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS GCA 72 bp | GCTCCAGCTGCAGGGTGTCCAGCTCCTCAATGCCAATaGCATCGTCCTCGGAGCGGGCCAGCACTGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: APAAGCPAPQCQ*HRPRSGPALPC Trigger: ACACGGCAGTGCTGGCCCGCTCCGAGGACGATGGCATTGGCATTGAGGAGCTGGACACCCTGCAGCTGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS GCA 72 bp | AATGCCAATGCCATCGTCCTCGGAGCGGGCCAGCACTaGCGTGTAGCGGGGACAGACCTTCAGGTGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NANAIVLGAGQH*RVAGTDLQVVH Trigger: GTGGACCACCTGAAGGTCTGTCCCCGCTACACGGCAGTGCTGGCCCGCTCCGAGGACGATGGCATTGGCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 90 bp | TTCTGCCGGGCAGCCATGATCTTCCGGAAGGCATCCATGACTTCGTaGTCGGCCATGCGGACCCGCTGCCTTAGCTCCTGCCGGCTCACC | + |
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Preference number: 6 (lower is better) Translates to: FCRAAMIFRKASMTS*SAMRTRCLSSCRLT Trigger: GGTGAGCCGGCAGGAGCTAAGGCAGCGGGTCCGCATGGCCGACAACGAAGTCATGGATGCCTTCCGGAAGATCATGGCTGCCCGGCAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CAA 90 bp | TTGGTGCGGTTGTGTGCACTGAGTGCTTTCAGCTCAGCTTGCCGTTaGCGCAGCTCAGCAAGGACCTCGTCCTCTGAGTCCTCCGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVRLCALSAFSSACR*RSSARTSSSESSAG Trigger: GCCCGCGGAGGACTCAGAGGACGAGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CAA 72 bp | GCAGCCATGATCTTCCGGAAGGCATCCATGACTTCGTaGTCGGCCATGCGGACCCGCTGCCTTAGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AAMIFRKASMTS*SAMRTRCLSSC Trigger: GCAGGAGCTAAGGCAGCGGGTCCGCATGGCCGACAACGAAGTCATGGATGCCTTCCGGAAGATCATGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CCA 72 bp | GCGCTGTGTCAGGGCTCCAAAGGGACACCCGTCTTCTaGCTGTTCATGCTGGGCCTCAGACTTCTTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALCQGSKGTPVF*LFMLGLRLLQQ Trigger: CTGCTGAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCCTTTGGAGCCCTGACACAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CAA 72 bp | GGTGCGGTTGTGTGCACTGAGTGCTTTCAGCTCAGCTaGCCGTTTGCGCAGCTCAGCAAGGACCTCGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAVVCTECFQLS*PFAQLSKDLVL Trigger: GAGGACGAGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS TCA 72 bp | TCAGGAGCTCCTCTAGTGTCCGTACCTCCTCACTGGTaGTGTCGGCACAATAGGGCTCCACAGAGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGAPLVSVPPHW*CRHNRAPQRPR Trigger: TCTGGGCCTCTGTGGAGCCCTATTGTGCCGACATCACCAGTGAGGAGGTACGGACACTAGAGGAGCTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032410.14 |
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| CDS GCA 72 bp | AGGGCTCCAAAGGGACACCCGTCTTCTGGCTGTTCATaGTGGGCCTCAGACTTCTTCAGCAGGGCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: RAPKGHPSSGCS*WASDFFSRAST Trigger: TGTGGATGCCCTGCTGAAGAAGTCTGAGGCCCAGCATGAACAGCCAGAAGACGGGTGTCCCTTTGGAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS GCA 72 bp | GTGCGGTTGTGTGCACTGAGTGCTTTCAGCTCAGCTTaGCGTTTGCGCAGCTCAGCAAGGACCTCGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VRLCALSAFSSA*RLRSSARTSSS Trigger: AGAGGACGAGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CCA 72 bp | CATATTCCTGGATCTTGGGTTGGACGTTTTTGGATTTaGGTCGTCCCGGGCCAGGGCCTGGCCCATGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HIPGSWVGRFWI*VVPGQGLAHVL Trigger: CAGGACATGGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS GCA 72 bp | CAGGTCATGCTTCTTGGTGCGGTTGTGTGCACTGAGTaGTTTCAGCTCAGCTTGCCGTTTGCGCAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: QVMLLGAVVCTE*FQLSLPFAQLS Trigger: GCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCACCAAGAAGCATGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CAA 72 bp | TCTGGGTTTCAGCTTCCAGTACACGCAGTCTCCGGCTaGCAGAGGACAGCAGAGTCTCAAGCTCCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGFQLPVHAVSG*QRTAESQAPAA Trigger: TGCAGCTGGAGCTTGAGACTCTGCTGTCCTCTGCAAGCCGGAGACTGCGTGTACTGGAAGCTGAAACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 72 bp | TCATATTCCTGGATCTTGGGTTGGACGTTTTTGGATTaGGGTCGTCCCGGGCCAGGGCCTGGCCCATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SYSWILGWTFLD*GRPGPGPGPCP Trigger: AGGACATGGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 72 bp | TTGTGTGCACTGAGTGCTTTCAGCTCAGCTTGCCGTTaGCGCAGCTCAGCAAGGACCTCGTCCTCTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LCALSAFSSACR*RSSARTSSSES Trigger: GGACTCAGAGGACGAGGTCCTTGCTGAGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS TCA 72 bp | TCAGCAGGTCATGCTTCTTGGTGCGGTTGTGTGCACTaGGTGCTTTCAGCTCAGCTTGCCGTTTGCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SAGHASWCGCVH*VLSAQLAVCAA Trigger: AGCTGCGCAAACGGCAAGCTGAGCTGAAAGCACTCAGTGCACACAACCGCACCAAGAAGCATGACCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS CAA 72 bp | TCCACAGAGGCCCAGAACCTGTTGGGAGCATCATTCTaGGGGATCCGAGGCACGTCGATTGGGTCATCAGTA | + |
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Preference number: 6 (lower is better) Translates to: STEAQNLLGASF*GIRGTSIGSSV Trigger: TACTGATGACCCAATCGACGTGCCTCGGATCCCCAAGAATGATGCTCCCAACAGGTTCTGGGCCTCTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 90 bp | GGGTCATCAGTAAATTCATATTCCTGGATCTTGGGTTGGACGTTTTaGGATTTGGGTCGTCCCGGGCCAGGGCCTGGCCCATGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GSSVNSYSWILGWTF*DLGRPGPGPGPCPV Trigger: GACAGGACATGGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 90 bp | CACGTCGATTGGGTCATCAGTAAATTCATATTCCTGGATCTTGGGTaGGACGTTTTTGGATTTGGGTCGTCCCGGGCCAGGGCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HVDWVISKFIFLDLG*DVFGFGSSRARAWP Trigger: GGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCAATCGACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CCA 72 bp | CGGTCCCCTTTCTTATCCTGCCAGTCAGTAAGGATCTaGGTTTCAGCTTCCAGTACACGCAGTCTCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RSPFLSCQSVRI*VSASSTRSLRL Trigger: AAGCCGGAGACTGCGTGTACTGGAAGCTGAAACCCAGATCCTTACTGACTGGCAGGATAAGAAAGGGGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 72 bp | GTAAATTCATATTCCTGGATCTTGGGTTGGACGTTTTaGGATTTGGGTCGTCCCGGGCCAGGGCCTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VNSYSWILGWTF*DLGRPGPGPGP Trigger: TGGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 90 bp | TCAGTAAATTCATATTCCTGGATCTTGGGTTGGACGTTTTTGGATTaGGGTCGTCCCGGGCCAGGGCCTGGCCCATGTCCTGTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SVNSYSWILGWTFLD*GRPGPGPGPCPVFP Trigger: AGGGAAGACAGGACATGGGCCAGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 90 bp | CGAGGCACGTCGATTGGGTCATCAGTAAATTCATATTCCTGGATCTaGGGTTGGACGTTTTTGGATTTGGGTCGTCCCGGGCCAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RGTSIGSSVNSYSWI*GWTFLDLGRPGPGP Trigger: AGGCCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCAATCGACGTGCCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS TCA 72 bp | CCACATCTTTTGTGTCCAGTTCTGTCAGTGGTCCTATaGGGCCTTTCTTCTTGTCAGCCACAGCTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PHLLCPVLSVVL*GLSSCQPQLLP Trigger: GGGCAGCAGCTGTGGCTGACAAGAAGAAAGGCCTCATAGGACCACTGACAGAACTGGACACAAAAGATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 ENSMUST00000099118.8 |
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| CDS GCA 72 bp | CCTAGCTTCAGGAATCGTCGGTCCCCTTTCTTATCCTaGCAGTCAGTAAGGATCTGGGTTTCAGCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PSFRNRRSPFLS*QSVRIWVSASS Trigger: ACTGGAAGCTGAAACCCAGATCCTTACTGACTGGCAGGATAAGAAAGGGGACCGACGATTCCTGAAGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CCA 72 bp | GGGTCATCAGTAAATTCATATTCCTGGATCTTGGGTTaGACGTTTTTGGATTTGGGTCGTCCCGGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GSSVNSYSWILG*TFLDLGRPGPG Trigger: CCCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 72 bp | TGGGTCATCAGTAAATTCATATTCCTGGATCTTGGGTaGGACGTTTTTGGATTTGGGTCGTCCCGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WVISKFIFLDLG*DVFGFGSSRAR Trigger: CCTGGCCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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| CDS CAA 72 bp | TCGATTGGGTCATCAGTAAATTCATATTCCTGGATCTaGGGTTGGACGTTTTTGGATTTGGGTCGTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SIGSSVNSYSWI*GWTFLDLGRPG Trigger: CCCGGGACGACCCAAATCCAAAAACGTCCAACCCAAGATCCAGGAATATGAATTTACTGATGACCCAATCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032410.14 ENSMUST00000043333.9 |
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