Pregenerated sensors for TADA2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029196Ensembl transcript IDs: ENSMUST00000031097.8, ENSMUST00000119916.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGTGGTCTCTGGCCTCCACAGCAGAGGGTTCTGTGCACAGCCTaGCTCCCGGTAAAGTGCGGTGTGCCGGGGCTGTGCTTGGGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: GGGLWPPQQRVLCTA*LPVKCGVPGLCLGC Trigger: ACACCCCAAGCACAGCCCCGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGCCAGAGACCACCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | CTCATCTTAAGTGGCTCAGTGGGGAGCGGGCCTGGTGGTGGTCTCTaGCCTCCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTA | + |
|
Preference number: 1 (lower is better) Translates to: LILSGSVGSGPGGGL*PPQQRVLCTACLPV Trigger: TACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGCCAGAGACCACCACCAGGCCCGCTCCCCACTGAGCCACTTAAGATGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 90 bp | ACCCCATTGCTGTTCAGTCACACCAGCTACTGTCCACTATTCAACTaGAGGGGGCAGTGTGGAGCTGGTCCTTTGACACCATTGCTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: TPLLFSHTSYCPLFN*RGQCGAGPLTPLLS Trigger: GCTGAGCAATGGTGTCAAAGGACCAGCTCCACACTGCCCCCTGCAGTTGAATAGTGGACAGTAGCTGGTGTGACTGAACAGCAATGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | GCTTGTGTCACCAGAGAAAAGCTGATGGCAGGAACACACGGCTCCTaGCTCCCACAGCATAACAGCTTCTTAACCCAAACGGGGAAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: ACVTREKLMAGTHGS*LPQHNSFLTQTGKG Trigger: GCCTTTCCCCGTTTGGGTTAAGAAGCTGTTATGCTGTGGGAGCCAGGAGCCGTGTGTTCCTGCCATCAGCTTTTCTCTGGTGACACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | CACCAAGCTGGGATTCTGGTGCTGGAAACACCAGGACAAAACCAGTaGTTCTCAAACTTGAGCTTGCATCCCAGCCACCGGGATGGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: HQAGILVLETPGQNQ*FSNLSLHPSHRDGL Trigger: CAAACCATCCCGGTGGCTGGGATGCAAGCTCAAGTTTGAGAACCACTGGTTTTGTCCTGGTGTTTCCAGCACCAGAATCCCAGCTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | CACCAGCTACTGTCCACTATTCAACTGCAGGGGGCAGTGTGGAGCTaGTCCTTTGACACCATTGCTCAGCATCTTCTGGTGTCAAGAGAA | + |
|
Preference number: 1 (lower is better) Translates to: HQLLSTIQLQGAVWS*SFDTIAQHLLVSRE Trigger: TTCTCTTGACACCAGAAGATGCTGAGCAATGGTGTCAAAGGACCAGCTCCACACTGCCCCCTGCAGTTGAATAGTGGACAGTAGCTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | ATTGAGGGCCTGAAATGGCTGTTGTTAGGTAAGTGGAAGCTCATGTaGTCACTGTGTGCAAATGAGGGGCTCATCTTAAGTGGCTCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: IEGLKWLLLGKWKLM*SLCANEGLILSGSV Trigger: CACTGAGCCACTTAAGATGAGCCCCTCATTTGCACACAGTGACCACATGAGCTTCCACTTACCTAACAACAGCCATTTCAGGCCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | GAAGCAAGCACTATTGAGGGCCTGAAATGGCTGTTGTTAGGTAAGTaGAAGCTCATGTGGTCACTGTGTGCAAATGAGGGGCTCATCTTA | + |
|
Preference number: 1 (lower is better) Translates to: EASTIEGLKWLLLGK*KLMWSLCANEGLIL Trigger: TAAGATGAGCCCCTCATTTGCACACAGTGACCACATGAGCTTCCACTTACCTAACAACAGCCATTTCAGGCCCTCAATAGTGCTTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 90 bp | GTCCTCAGCACCTACTGCTCCATTTCAACATTGCACACTCTGCCTTaGACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGTAAGTGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: VLSTYCSISTLHTLP*TQKGLPSQVYCKCS Trigger: TGAACACTTACAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGGTGCTGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 90 bp | TGGAAGTCCTCAGCACCTACTGCTCCATTTCAACATTGCACACTCTaGCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGTAAGT | + |
|
Preference number: 1 (lower is better) Translates to: WKSSAPTAPFQHCTL*LELKRVFQVRCTVS Trigger: ACTTACAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGGTGCTGAGGACTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 90 bp | GACACCATTGCTCAGCATCTTCTGGTGTCAAGAGAAATCTGGGCCTaGTGGCCCACAATGCACTTTACAACTAAAGCCATTTACAGTATA | + |
|
Preference number: 1 (lower is better) Translates to: DTIAQHLLVSREIWA*WPTMHFTTKAIYSI Trigger: TATACTGTAAATGGCTTTAGTTGTAAAGTGCATTGTGGGCCAGCAGGCCCAGATTTCTCTTGACACCAGAAGATGCTGAGCAATGGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 90 bp | ACCATTGCTCAGCATCTTCTGGTGTCAAGAGAAATCTGGGCCTGCTaGCCCACAATGCACTTTACAACTAAAGCCATTTACAGTATATTT | + |
|
Preference number: 1 (lower is better) Translates to: TIAQHLLVSREIWAC*PTMHFTTKAIYSIF Trigger: AAATATACTGTAAATGGCTTTAGTTGTAAAGTGCATTGTGGGCCAGCAGGCCCAGATTTCTCTTGACACCAGAAGATGCTGAGCAATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 90 bp | AGGTTGGGGACAGTCTTCATAGGAACACAAAGGCAAGCTGTCTTCTaGATGGATTACCTTAGGACTAAGTTAAAAAGACACACGCTTATC | + |
|
Preference number: 1 (lower is better) Translates to: RLGTVFIGTQRQAVF*MDYLRTKLKRHTLI Trigger: GATAAGCGTGTGTCTTTTTAACTTAGTCCTAAGGTAATCCATTCAGAAGACAGCTTGCCTTTGTGTTCCTATGAAGACTGTCCCCAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTGCCGACGGGGAAAGGCTCATaGAATAAAGGGGACACGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQQRVLCTACLPVKCGVPTGKGS*NKGDTS Trigger: GGACGTGTCCCCTTTATTTCATGAGCCTTTCCCCGT...CGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATGCTCTAGTGGGGAGCGGGCCTaGTGGTGGTCTCTGGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QDHIQKQCTGSKAQAGCSSGERA*WWSLAS Trigger: GGAGGCCAGAGACCACCACCAGGCCCGCTCCCCACT...AGAGCATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTGTGGTCACTCCAGGACTCTAAAGCAGGGTCTGGGCGTGAGAGCCCTGAGCACATACAAAAGCAGTaGACAGGCTCCAAGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: GLWSLQDSKAGSGRESPEHIQKQ*TGSKAQ Trigger: CTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTG...CTCAGGGCTCTCACGCCCAGACCCTGCTTTAGAGTCCTGGAGTGACCACAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTTAACCTGGGGTATGACTGTATTTCTGACAGTGCCTGGGGAACCCTACTTTGGGGAGCGGGCCTGGTaGTGGTCTCTGGCCTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: DLTWGMTVFLTVPGEPYFGERAW*WSLAST Trigger: TGTGGAGGCCAGAGACCACCACCAGGCCCGCTCCCC...AAAGTAGGGTTCCCCAGGCACTGTCAGAAATACAGTCATACCCCAGGTTAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATCAGCAGAGGGTTCTGTaGACAGCCTGCCTCCCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: CCKITYKSSAQAPRHRQDQQRVL*TACLPV Trigger: TACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTG...ATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGTCATTTTGTAGAAGACACACTGAAACTTCAAACCTCACCAAGCTGGGATTGCCGGGGCTGTGCTTaGGGTGTCAGCTGGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GCHFVEDTLKLQTSPSWDCRGCA*GVSWGG Trigger: CCCTCCCCAGCTGACACCCCAAGCACAGCCCCGGCA...ATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTGTCTTCTACAAAATGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACTGCTCCATTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCAAGGCAGCCCTCATCTaGCCCTGTGGCCCTTCCGTT | + |
|
Preference number: 2 (lower is better) Translates to: PTAPFQHCTLCLELKRVFKAALI*PCGPSV Trigger: AACGGAAGGGCCACAGGGTCAGATGAGGGCTGCCTT...GAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTCTGGTGTCAAGAGAAATCTGGGCCTGCTGGCCCACAATGCACTTTACAAAGGGTACAGGAATGTaGCAGGAGAGCCTGTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLLVSREIWACWPTMHFTKGTGM*QESLSR Trigger: CCTGGACAGGCTCTCCTGGCACATTCCTGTACCCTT...TGTAAAGTGCATTGTGGGCCAGCAGGCCCAGATTTCTCTTGACACCAGAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 90 bp | GTGCTGGAAACACCAGGACAAAACCAGTGGTTCTCAAACTTGAGCTaGCATCCCAGCCACCGGGATGGTTTGAAAAACACCCTGCTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VLETPGQNQWFSNLS*HPSHRDGLKNTLLV Trigger: GACTAGCAGGGTGTTTTTCAAACCATCCCGGTGGCTGGGATGCAAGCTCAAGTTTGAGAACCACTGGTTTTGTCCTGGTGTTTCCAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGAAGGAGGCCCCAGAAACAAGCTTTTCAGTAGGGCTGGGAAGGAGCCATTTAGACCCCAGATCATTTaGCTCACAAGCTGCTTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: REGGPRNKLFSRAGKEPFRPQII*LTSCFS Trigger: GCTAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCT...AAATGGCTCCTTCCCAGCCCTACTGAAAAGCTTGTTTCTGGGGCCTCCTTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGTCATTTTGTAGAAGACACACTGAAACTTCAAACCTCACCAAGCTGGGATCCTGGTGGTGGTCTCTaGCCTCCACAGCAGAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GCHFVEDTLKLQTSPSWDPGGGL*PPQQRV Trigger: AACCCTCTGCTGTGGAGGCCAGAGACCACCACCAGG...ATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTGTCTTCTACAAAATGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 90 bp | CAGTGGTTCTCAAACTTGAGCTTGCATCCCAGCCACCGGGATGGTTaGAAAAACACCCTGCTAGTCCCTGTTAATGAAGCCCCCAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: QWFSNLSLHPSHRDG*KNTLLVPVNEAPKS Trigger: AGATTTGGGGGCTTCATTAACAGGGACTAGCAGGGTGTTTTTCAAACCATCCCGGTGGCTGGGATGCAAGCTCAAGTTTGAGAACCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 90 bp | ATTCTGGTGCTGGAAACACCAGGACAAAACCAGTGGTTCTCAAACTaGAGCTTGCATCCCAGCCACCGGGATGGTTTGAAAAACACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ILVLETPGQNQWFSN*SLHPSHRDGLKNTL Trigger: CAGGGTGTTTTTCAAACCATCCCGGTGGCTGGGATGCAAGCTCAAGTTTGAGAACCACTGGTTTTGTCCTGGTGTTTCCAGCACCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTGAAGGAGGCCCCAGAAACAAGCTTTTCAGTAGGGCTGGGAAGGAGCCATTTGCTCCATTTCAACATTaGACACTCTGCCTTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: REGGPRNKLFSRAGKEPFAPFQH*TLCLEL Trigger: GAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGC...AAATGGCTCCTTCCCAGCCCTACTGAAAAGCTTGTTTCTGGGGCCTCCTTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGTCATTTTGTAGAAGACACACTGAAACTTCAAACCTCACCAAGCTGGGATAGGGGGCAGGGGCTGTaGTCACTCCAGGACTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: GCHFVEDTLKLQTSPSWDRGQGL*SLQDSK Trigger: TTTAGAGTCCTGGAGTGACCACAGCCCCTGCCCCCT...ATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTGTCTTCTACAAAATGACAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 90 bp | AACAAGCTTTTCAGTAGGGCTGGGAAGGAGCCATTTCTGAGTTTGTaGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: NKLFSRAGKEPFLSL*QDHIQKQCTGSKAQ Trigger: CTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACAAACTCAGAAATGGCTCCTTCCCAGCCCTACTGAAAAGCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTGTCATTTTGTAGAAGACACACTGAAACTTCAAACCTCACCAAGCTGGGATAGTGGTTCTCAAACTTaGGCTTGCATCCCAGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: GCHFVEDTLKLQTSPSWDSGSQT*ACIPAT Trigger: GGTGGCTGGGATGCAAGCTCAAGTTTGAGAACCACT...ATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTGTCTTCTACAAAATGACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 90 bp | AGAAACAAGCTTTTCAGTAGGGCTGGGAAGGAGCCATTTCTGAGTTaGTTGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RNKLFSRAGKEPFLS*LQDHIQKQCTGSKA Trigger: TGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACAAACTCAGAAATGGCTCCTTCCCAGCCCTACTGAAAAGCTTGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGTCATTTTGTAGAAGACACACTGAAACTTCAAACCTCACCAAGCTGGGATAGAGAAATCTGGGCCTaGTGGCCCACAATGCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: GCHFVEDTLKLQTSPSWDREIWA*WPTMHF Trigger: AAAGTGCATTGTGGGCCAGCAGGCCCAGATTTCTCT...ATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTGTCTTCTACAAAATGACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTGCTCCATTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCAAAGAGCAACAATGTTaGGGGAGACCCCAGATCATT | + |
|
Preference number: 2 (lower is better) Translates to: PTAPFQHCTLCLELKRVFKEQQC*GRPQII Trigger: AATGATCTGGGGTCTCCCCCAACATTGTTGCTCTTT...GAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTGCTCCATTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCAAGTGGAAGCTCATGTaGTCACTGTGTGCAAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: PTAPFQHCTLCLELKRVFKWKLM*SLCANE Trigger: CTCATTTGCACACAGTGACCACATGAGCTTCCACTT...GAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTGCTCCATTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCTGTTGTTAGGTAAGTaGAAGCTCATGTGGTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: PTAPFQHCTLCLELKRVFLLLGK*KLMWSL Trigger: CAGTGACCACATGAGCTTCCACTTACCTAACAACAG...GAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATAAGCTGTCTTCTGAATaGATTACCTTAGGACTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CCKITYKSSAQAPRHRQDKLSSE*ITLGLS Trigger: ACTTAGTCCTAAGGTAATCCATTCAGAAGACAGCTT...ATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTAAAGAGCAACAATGTTaGGGGAGACCCCAGATCATT | + |
|
Preference number: 2 (lower is better) Translates to: YLPYESNLRLLLLLLPEGKEQQC*GRPQII Trigger: AATGATCTGGGGTCTCCCCCAACATTGTTGCTCTTT...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| 3UTR GCA 72 bp | CTCTGGCCTCCACAGCAGAGGGTTCTGTGCACAGCCTaGCTCCCGGTAAAGTGCGGTGTGCCGGGGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LWPPQQRVLCTA*LPVKCGVPGLC Trigger: GCACAGCCCCGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGCCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | CAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTaGGGTGTGCCGGGGCTGTGCTTGGGGTGTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QRVLCTACLPVK*GVPGLCLGCQL Trigger: CAGCTGACACCCCAAGCACAGCCCCGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | GGTGGTGGTCTCTGGCCTCCACAGCAGAGGGTTCTGTaGACAGCCTGCCTCCCGGTAAAGTGCGGTGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GGGLWPPQQRVL*TACLPVKCGVP Trigger: CGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGCCAGAGACCACCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | GCTCTTGTACCTCTCAGGGACAGGGGGCAGGGGCTGTaGTCACTCCAGGACTCTAAAGCAGGGTCTGGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: ALVPLRDRGQGL*SLQDSKAGSGR Trigger: ACGCCCAGACCCTGCTTTAGAGTCCTGGAGTGACCACAGCCCCTGCCCCCTGTCCCTGAGAGGTACAAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTGCCGGGGACACGTCCAAGGTaGGGGACAGTCTTCATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQQRVLCTACLPVKCGVPGTRPR*GTVFIG Trigger: TCCTATGAAGACTGTCCCCAACCTTGGACGTGTCCC...CGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | CTGTTCAGTCACACCAGCTACTGTCCACTATTCAACTaGAGGGGGCAGTGTGGAGCTGGTCCTTTGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: LFSHTSYCPLFN*RGQCGAGPLTP Trigger: TGGTGTCAAAGGACCAGCTCCACACTGCCCCCTGCAGTTGAATAGTGGACAGTAGCTGGTGTGACTGAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | GGAGCTGGTCCTTTGACACCATTGCTCAGCATCTTCTaGTGTCAAGAGAAATCTGGGCCTGCTGGCCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GAGPLTPLLSIF*CQEKSGPAGPQ Trigger: TTGTGGGCCAGCAGGCCCAGATTTCTCTTGACACCAGAAGATGCTGAGCAATGGTGTCAAAGGACCAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | TGTAAGTGTTCACAGCAGCGAAAGGCAGCCCTCATCTaGCCCTGTGGCCCTTCCGTTAACTGCTTTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: CKCSQQRKAALI*PCGPSVNCFPI Trigger: AATGGGAAAGCAGTTAACGGAAGGGCCACAGGGTCAGATGAGGGCTGCCTTTCGCTGCTGTGAACACTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | TATTCAACTGCAGGGGGCAGTGTGGAGCTGGTCCTTTaGCACCATTGCTCAGCATCTTCTGGTGTCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YSTAGGSVELVL*HHCSASSGVKR Trigger: TCTCTTGACACCAGAAGATGCTGAGCAATGGTGTCAAAGGACCAGCTCCACACTGCCCCCTGCAGTTGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | GACTGTATTTCTGACAGTGCCTGGGGAACCCTACTTTaGGAACCACTGGCTCACCTAGGCATTGAGTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: DCISDSAWGTLL*EPLAHLGIEYQ Trigger: TTGGTACTCAATGCCTAGGTGAGCCAGTGGTTCTCAAAGTAGGGTTCCCCAGGCACTGTCAGAAATACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | TGCCTGCTTAAGCACAGCTTTTTGTCCAACAGCCCTTaGCCACATGTTGACAGAATCCTCTGCTTCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CLLKHSFLSNSP*PHVDRILCFSS Trigger: GCTTGAGAAGCAGAGGATTCTGTCAACATGTGGCCAAGGGCTGTTGGACAAAAAGCTGTGCTTAAGCAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | GCTCAGCATCTTCTGGTGTCAAGAGAAATCTGGGCCTaGTGGCCCACAATGCACTTTACAACTAAAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: AQHLLVSREIWA*WPTMHFTTKAI Trigger: AATGGCTTTAGTTGTAAAGTGCATTGTGGGCCAGCAGGCCCAGATTTCTCTTGACACCAGAAGATGCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | CACACTGAAACTTCAAACCTCACCAAGCTGGGATTCTaGTGCTGGAAACACCAGGACAAAACCAGTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTETSNLTKLGF*CWKHQDKTSGS Trigger: AGAACCACTGGTTTTGTCCTGGTGTTTCCAGCACCAGAATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | TCAGCACCTACTGCTCCATTTCAACATTGCACACTCTaGCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SAPTAPFQHCTL*LELKRVFQVRC Trigger: ACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | ACTGAAACTTCAAACCTCACCAAGCTGGGATTCTGGTaGTGGAAACACCAGGACAAAACCAGTGGTTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TETSNLTKLGFW*WKHQDKTSGSQ Trigger: TTGAGAACCACTGGTTTTGTCCTGGTGTTTCCAGCACCAGAATCCCAGCTTGGTGAGGTTTGAAGTTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | CAGCATCTTCTGGTGTCAAGAGAAATCTGGGCCTGCTaGCCCACAATGCACTTTACAACTAAAGCCATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: QHLLVSREIWAC*PTMHFTTKAIY Trigger: GTAAATGGCTTTAGTTGTAAAGTGCATTGTGGGCCAGCAGGCCCAGATTTCTCTTGACACCAGAAGATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | AATGAAGCCCCCAAATCTCTGCTTCGAGATTTAACCTaGGGTATGACTGTATTTCTGACAGTGCCTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NEAPKSLLRDLT*GMTVFLTVPGE Trigger: TTCCCCAGGCACTGTCAGAAATACAGTCATACCCCAGGTTAAATCTCGAAGCAGAGATTTGGGGGCTTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | GTAGAAGACACACTGAAACTTCAAACCTCACCAAGCTaGGATTCTGGTGCTGGAAACACCAGGACAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VEDTLKLQTSPS*DSGAGNTRTKP Trigger: TGGTTTTGTCCTGGTGTTTCCAGCACCAGAATCCCAGCTTGGTGAGGTTTGAAGTTTCAGTGTGTCTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | ACCTACTGCTCCATTTCAACATTGCACACTCTGCCTTaGACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: TYCSISTLHTLP*TQKGLPSQVYC Trigger: ACAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | ATAACTTCACTTTTACTTCCGAGCCCAAACACTCTATaGGGTAAACAGGCTCTTGTACCTCTCAGGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ITSLLLPSPNTL*GKQALVPLRDR Trigger: CCTGTCCCTGAGAGGTACAAGAGCCTGTTTACCTCATAGAGTGTTTGGGCTCGGAAGTAAAAGTGAAGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CCA 72 bp | CTGAAATGGCTGTTGTTAGGTAAGTGGAAGCTCATGTaGTCACTGTGTGCAAATGAGGGGCTCATCTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LKWLLLGKWKLM*SLCANEGLILS Trigger: ACTTAAGATGAGCCCCTCATTTGCACACAGTGACCACATGAGCTTCCACTTACCTAACAACAGCCATTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | ACAAGCTTTTCAGTAGGGCTGGGAAGGAGCCATTTCTaGGTTTGTTGCAAGATCACATACAAAAGCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSFSVGLGRSHF*VCCKITYKSSA Trigger: TGCACTGCTTTTGTATGTGATCTTGCAACAAACTCAGAAATGGCTCCTTCCCAGCCCTACTGAAAAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTGCTCCATTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCTTAAGATTGCTACTATaGCTTCTTCCAGAAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PTAPFQHCTLCLELKRVFLRLLL*LLPEGH Trigger: ATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAA...GAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR GCA 72 bp | TTTATATCATCGAAAGATGTACACACACTATATGCCTaGTTAAGCACAGCTTTTTGTCCAACAGCCCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FISSKDVHTLYA*LSTAFCPTALG Trigger: GCCAAGGGCTGTTGGACAAAAAGCTGTGCTTAAGCAGGCATATAGTGTGTGTACATCTTTCGATGATATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR TCA 72 bp | ACAGTCTTCATAGGAACACAAAGGCAAGCTGTCTTCTaGATGGATTACCTTAGGACTAAGTTAAAAAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: TVFIGTQRQAVF*MDYLRTKLKRH Trigger: GTGTCTTTTTAACTTAGTCCTAAGGTAATCCATTCAGAAGACAGCTTGCCTTTGTGTTCCTATGAAGACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTATGTTCTTCCGGCGCTaGCTCTCCTTCAGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASTAEGSVHSLPPGKVRCMFFRR*LSFSFR Trigger: GCGGAAGCTGAAGGAGAGGCAGCGCCGGAAGAACAT...ACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTAGAGTGGCCGTAGTTTaGGCCGCAGCTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTAEGSVHSLPPGKVRCRVAVV*AAALSP Trigger: AGGAGAAAGAGCTGCGGCTCAAACTACGGCCACTCT...ACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTGCCGAGGACTCAAGTTCAATaGACTACAGAGAACCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQQRVLCTACLPVKCGVPRTQVQ*TTENLL Trigger: GAGAAGGTTCTCTGTAGTTCATTGAACTTGAGTCCT...CGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | CGTGAAGGAGGCCCCAGAAACAAGCTTTTCAGTAGGGCTGGGAAGGAGCCATTTGATCTGTCACCCGGTTaGGGATGGTGTCAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: REGGPRNKLFSRAGKEPFDLSPG*GWCQGC Trigger: GCATCCCTGACACCATCCCCAACCGGGTGACAGATC...AAATGGCTCCTTCCCAGCCCTACTGAAAAGCTTGTTTCTGGGGCCTCCTTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATTTGCCGAAGCCGAACTaGTCGATGGCGTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CCKITYKSSAQAPRHRQDLPKPN*SMASSS Trigger: GCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGCAA...ATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | CAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATGCTCTTCTCCCGTTTGTGTCTaGCGGCCTCATATTCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDHIQKQCTGSKAQAGCSSPVCV*RPHIRP Trigger: CGGCCGAATATGAGGCCGCCAGACACAAACGGGAGA...AGAGCATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTTCCACCCACTTTCTGTaGGGAAATTTAAAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASTAEGSVHSLPPGKVRCSTHFL*GNLKSF Trigger: AAAGGATTTTAAATTTCCTCACAGAAAGTGGGTGGA...ACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTATGTTCTTCCGGCGCTaGCTCTCCTTCAGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KEQQCWGRPQIIWLTSCFMFFRR*LSFSFR Trigger: GCGGAAGCTGAAGGAGAGGCAGCGCCGGAAGAACAT...AAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCGAGATTTAACCTGGGGTATGACTGTATTTCTGACAGTGCCTGGGGAACACAGCTCGATGTCCTaGCACTCTGTGCAGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRDLTWGMTVFLTVPGEHSSMS*HSVQRK Trigger: CTTCCGCTGCACAGAGTGCCAGGACATCGAGCTGTG...TTCCCCAGGCACTGTCAGAAATACAGTCATACCCCAGGTTAAATCTCGAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTGCTGCTCCTCGCGGCTaGTCCAGCCGCCCTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGAAPRG*SSRPPP Trigger: AGGCGGAGGGCGGCTGGACCAGCCGCGAGGAGCAGC...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | AACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGAGCCGAACTGCTCGATaGCGTCCAGCAGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIAHSALNSKGSSKSGVLSRTAR*RPAAAA Trigger: AGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCT...CAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTATCACCCGGTTGGGGATaGTGTCAGGGATGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSNNVGGDPRSFGSQAALSPGWG*CQGCRL Trigger: AAGCCTGCATCCCTGACACCATCCCCAACCGGGTGA...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTATCTCCCGTTTGTGTCTaGCGGCCTCATATTCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSNNVGGDPRSFGSQAALSPVCV*RPHIRP Trigger: CGGCCGAATATGAGGCCGCCAGACACAAACGGGAGA...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATGCTCTCTACATGGGCACGCTTaGGCTCTATCTCCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDHIQKQCTGSKAQAGCSLHGHA*ALSPHH Trigger: ATGATGTGGAGATAGAGCTCAAGCGTGCCCATGTAG...AGAGCATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGGACAGTCTTCATAGGAACACAAAGGCAAGCTGTCTTCTGAATGGATTATTCCTGGGGAGTCCGTaGAGCACCAACATGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGDSLHRNTKASCLLNGLFLGSP*STNMCS Trigger: GCTGCACATGTTGGTGCTTCACGGACTCCCCAGGAA...TAATCCATTCAGAAGACAGCTTGCCTTTGTGTTCCTATGAAGACTGTCCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTAACCTTCTCCCTATCTaGCAGCAGCTCAAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEQQCWGRPQIIWLTSCFNLLPI*QQLKPR Trigger: CCTGGGTTTGAGCTGCTGTCAGATAGGGAGAAGGTT...AAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR GCA 90 bp | CCTACTGCTCCATTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCCATGTCTTCCCAGTTaGCGAAGCCGAACTGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTAPFQHCTLCLELKRVFPCLPS*RSRTAR Trigger: TCGAGCAGTTCGGCTTCGGCAACTGGGAAGACATGG...GAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | AACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGTGCTCCATCACTTCCTaGGGAGTCCGTGAAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NIAHSALNSKGSSKSGVLCSITS*GVREAP Trigger: TGGTGCTTCACGGACTCCCCAGGAAGTGATGGAGCA...CAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTAGAGAGGGCCTCCACTaGGGCAGGTGTGATCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQHCTLCLELKRVFQVRCREGLH*GRCDLS Trigger: TGACAGATCACACCTGCCCCAGTGGAGGCCCTCTCT...ACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATATAATCATCTCGCAGTaGCATGTAGCCCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCKITYKSSAQAPRHRQDIIISQ*HVAQLL Trigger: CAGCAGCTGGGCTACATGCCACTGCGAGATGATTAT...ATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 72 bp | TCAAACTTGAGCTTGCATCCCAGCCACCGGGATGGTTaGAAAAACACCCTGCTAGTCCCTGTTAATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNLSLHPSHRDG*KNTLLVPVNEA Trigger: GGCTTCATTAACAGGGACTAGCAGGGTGTTTTTCAAACCATCCCGGTGGCTGGGATGCAAGCTCAAGTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 72 bp | ACACCAGGACAAAACCAGTGGTTCTCAAACTTGAGCTaGCATCCCAGCCACCGGGATGGTTTGAAAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: TPGQNQWFSNLS*HPSHRDGLKNT Trigger: GGTGTTTTTCAAACCATCCCGGTGGCTGGGATGCAAGCTCAAGTTTGAGAACCACTGGTTTTGTCCTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTTGTCCTGGCACTCTGTaGAGCGGAAGCGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGCPGTL*SGSAAG Trigger: GCCCGCTGCGCTTCCGCTGCACAGAGTGCCAGGACA...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTGGATGGTGTCAGGGATaGAGGCTTTGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQHCTLCLELKRVFQVRCGWCQG*RLCPSS Trigger: GGAACTTGGGCAAAGCCTGCATCCCTGACACCATCC...ACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGCAAGATCACATACAAAAGCAGTGCACAGGCTCCAAGGCACAGGCAGGATAAGGTTCTCAATGGCTaGAAACTCGCTGTCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCKITYKSSAQAPRHRQDKVLNG*KLAVFA Trigger: GGCAAAGACAGCGAGTTTGCAGCCATTGAGAACCTT...ATCCTGCCTGTGCCTTGGAGCCTGTGCACTGCTTTTGTATGTGATCTTGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTAATAATCATCTCGCAGTaGCATGTAGCCCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSNNVGGDPRSFGSQAALIIISQ*HVAQLL Trigger: CAGCAGCTGGGCTACATGCCACTGCGAGATGATTAT...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | AACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGCTTGCCCAGGAAGGCTaGCACCAGGTTATAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NIAHSALNSKGSSKSGVLLAQEG*HQVIVS Trigger: AGAGACTATAACCTGGTGCCAGCCTTCCTGGGCAAG...CAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 72 bp | GGAAAGGCTCATGAAATAAAGGGGACACGTCCAAGGTaGGGGACAGTCTTCATAGGAACACAAAGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKAHEIKGTRPR*GTVFIGTQRQA Trigger: AGCTTGCCTTTGTGTTCCTATGAAGACTGTCCCCAACCTTGGACGTGTCCCCTTTATTTCATGAGCCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTAAAGGTTCTCAATGGCTaGAAACTCGCTGTCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSNNVGGDPRSFGSQAALKVLNG*KLAVFA Trigger: GGCAAAGACAGCGAGTTTGCAGCCATTGAGAACCTT...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTACAGGAAGGTTCTCAATaGCTGCAAACTCGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSNNVGGDPRSFGSQAALQEGSQ*LQTRCL Trigger: AAGACAGCGAGTTTGCAGCCATTGAGAACCTTCCTG...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | AACATTGCACACTCTGCCTTGAACTCAAAAGGGTCTTCCAAGTCAGGTGTACTGCAGGAAGGTTCTCAATaGCTGCAAACTCGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIAHSALNSKGSSKSGVLQEGSQ*LQTRCL Trigger: AAGACAGCGAGTTTGCAGCCATTGAGAACCTTCCTG...CAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 72 bp | GATGAAGCAAGCACTATTGAGGGCCTGAAATGGCTGTaGTTAGGTAAGTGGAAGCTCATGTGGTCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DEASTIEGLKWL*LGKWKLMWSLC Trigger: ACACAGTGACCACATGAGCTTCCACTTACCTAACAACAGCCATTTCAGGCCCTCAATAGTGCTTGCTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| 3UTR CAA 72 bp | CACCTACTGCTCCATTTCAACATTGCACACTCTGCCTaGAACTCAAAAGGGTCTTCCAAGTCAGGTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLLLHFNIAHSA*NSKGSSKSGVL Trigger: CAGTACACCTGACTTGGAAGACCCTTTTGAGTTCAAGGCAGAGTGTGCAATGTTGAAATGGAGCAGTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR TCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTTTCCTGGGGAGTCCGTaGAGCACCAACATGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGFLGSP*STNMCS Trigger: GCTGCACATGTTGGTGCTTCACGGACTCCCCAGGAA...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTTCACCCGGTTGGGGATaGTGTCAGGGATGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGSPGWG*CQGCRL Trigger: AAGCCTGCATCCCTGACACCATCCCCAACCGGGTGA...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTGATCTGTCACCCGGTTaGGGATGGTGTCAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGDLSPG*GWCQGC Trigger: GCATCCCTGACACCATCCCCAACCGGGTGACAGATC...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTAGAGAGGGCCTCCACTaGGGCAGGTGTGATCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGREGLH*GRCDLS Trigger: TGACAGATCACACCTGCCCCAGTGGAGGCCCTCTCT...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| 3UTR CAA 72 bp | TGTACACACACTATATGCCTGCTTAAGCACAGCTTTTaGTCCAACAGCCCTTGGCCACATGTTGACAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CTHTICLLKHSF*SNSPWPHVDRI Trigger: GATTCTGTCAACATGTGGCCAAGGGCTGTTGGACAAAAAGCTGTGCTTAAGCAGGCATATAGTGTGTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR GCA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAAGGATGGTGTCAGGGATaGAGGCTTTGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PYESNLRLLLLLLPEGHEGWCQG*RLCPSS Trigger: GGAACTTGGGCAAAGCCTGCATCCCTGACACCATCC...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | TATCTCCCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTTGCTCCATCACTTCCTaGGGAGTCCGTGAAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPYESNLRLLLLLLPEGCSITS*GVREAP Trigger: TGGTGCTTCACGGACTCCCCAGGAAGTGATGGAGCA...ACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGGACAGTCTTCATAGGAACACAAAGGCAAGCTGTCTTCTGAATGGATTAACATACATGTCTACATaGGCACGCTTGAGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VGDSLHRNTKASCLLNGLTYMST*ARLSSI Trigger: GATAGAGCTCAAGCGTGCCCATGTAGACATGTATGT...TAATCCATTCAGAAGACAGCTTGCCTTTGTGTTCCTATGAAGACTGTCCCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CCA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAACTTGCCCAGGAAGGCTaGCACCAGGTTATAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYESNLRLLLLLLPEGHELAQEG*HQVIVS Trigger: AGAGACTATAACCTGGTGCCAGCCTTCCTGGGCAAG...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR TCA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAACTACATGGGCACGCTTaGGCTCTATCTCCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PYESNLRLLLLLLPEGHELHGHA*ALSPHH Trigger: ATGATGTGGAGATAGAGCTCAAGCGTGCCCATGTAG...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CCA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAAACATACATGTCTACATaGGCACGCTTGAGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PYESNLRLLLLLLPEGHETYMST*ARLSSI Trigger: GATAGAGCTCAAGCGTGCCCATGTAGACATGTATGT...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR TCA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAAAGGACTCAAGTTCAATaGACTACAGAGAACCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PYESNLRLLLLLLPEGHERTQVQ*TTENLL Trigger: GAGAAGGTTCTCTGTAGTTCATTGAACTTGAGTCCT...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| 3UTR CAA 72 bp | ACACACGCTTATCTCCCCTATGAGTCAAATTTAAGATaGCTACTATTGCTTCTTCCAGAAGGTCATGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: THAYLPYESNLR*LLLLLPEGHEK Trigger: TTTTTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGGGAGATAAGCGTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR TCA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAATCCACCCACTTTCTGTaGGGAAATTTAAAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PYESNLRLLLLLLPEGHESTHFL*GNLKSF Trigger: AAAGGATTTTAAATTTCCTCACAGAAAGTGGGTGGA...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS TCA 90 bp | CCTCGCGGCTGGTCCAGCCGCCCTCCGCCTCAGGACCCCAGAGTGTaGATCGTCCGCCGTCTACCAGCTGGTAGCCGTGGTAGCGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRGWSSRPPPQDPRV*IVRRLPAGSRGSGG Trigger: ACCGCCGCTACCACGGCTACCAGCTGGTAGACGGCGGACGATTCACACTCTGGGGTCCTGAGGCGGAGGGCGGCTGGACCAGCCGCGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS GCA 90 bp | TCCCAGTTGCCGAAGCCGAACTGCTCGATGGCGTCCAGCAGCAGCTaGTCCTCGCGGCTGGTCCAGCCGCCCTCCGCCTCAGGACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQLPKPNCSMASSSS*SSRLVQPPSASGPQ Trigger: CTGGGGTCCTGAGGCGGAGGGCGGCTGGACCAGCCGCGAGGAGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGCAACTGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS CCA 90 bp | ATCTCCGCGCCGGCCGAGAAGCACTCGGGGCACAGCTCGATGTCCTaGCACTCTGTGCAGCGGAAGCGCAGCGGGCTCACCTCGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISAPAEKHSGHSSMS*HSVQRKRSGLTSAK Trigger: CTTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACAGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCGGCGCGGAGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS GCA 90 bp | CGGCCGAGAAGCACTCGGGGCACAGCTCGATGTCCTGGCACTCTGTaGAGCGGAAGCGCAGCGGGCTCACCTCGGCCAAGCAGTACACGC | + |
|
Preference number: 5 (lower is better) Translates to: RPRSTRGTARCPGTL*SGSAAGSPRPSSTR Trigger: GCGTGTACTGCTTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACAGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTGCCGGCCATGTCTTCCCAGTaGCCGAAGCCGAACTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PQQRVLCTACLPVKCGVPAMSSQ*PKPNCS Trigger: CGAGCAGTTCGGCTTCGGCAACTGGGAAGACATGGC...CGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS TCA 90 bp | GGTGTGGTAAGGCTAGGCGAGAGAGGGCCTCCACTGGGGCAGGTGTaGTCTGTCACCCGGTTGGGGATGGTGTCAGGGATGCAGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVVRLGERGPPLGQV*SVTRLGMVSGMQAL Trigger: CAAAGCCTGCATCCCTGACACCATCCCCAACCGGGTGACAGATCACACCTGCCCCAGTGGAGGCCCTCTCTCGCCTAGCCTTACCACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTTTTAGAGGGGATCCCTaGCCGCTTCTGGAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: ASTAEGSVHSLPPGKVRCFRGDP*PLLEVI Trigger: GATCACCTCCAGAAGCGGCAAGGGATCCCCTCTAAA...ACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS CCA 90 bp | GAGGGCCTCCACTGGGGCAGGTGTGATCTGTCACCCGGTTGGGGATaGTGTCAGGGATGCAGGCTTTGCCCAAGTTCCCATGGATATACA | + |
|
Preference number: 5 (lower is better) Translates to: EGLHWGRCDLSPGWG*CQGCRLCPSSHGYT Trigger: TGTATATCCATGGGAACTTGGGCAAAGCCTGCATCCCTGACACCATCCCCAACCGGGTGACAGATCACACCTGCCCCAGTGGAGGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGCAGAGGGTTCTGTGCACAGCCTGCCTCCCGGTAAAGTGCGGTGTGCCGTCTACATGGGCACGCTaGAGCTCTATCTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: PQQRVLCTACLPVKCGVPSTWAR*SSISTS Trigger: TGATGTGGAGATAGAGCTCAAGCGTGCCCATGTAGA...CGGCACACCGCACTTTACCGGGAGGCAGGCTGTGCACAGAACCCTCTGCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS CCA 90 bp | CCTTCTTGTCCTTGCCCAGGAAGGCTGGCACCAGGTTATAGTCTCTaGCAATGTTCTTCCGGCGCTGCCTCTCCTTCAGCTTCCGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PSCPCPGRLAPGYSL*QCSSGAASPSASAH Trigger: ATGTGCGGAAGCTGAAGGAGAGGCAGCGCCGGAAGAACATTGCCAGAGACTATAACCTGGTGCCAGCCTTCCTGGGCAAGGACAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS TCA 90 bp | GATATACATGCTAACGTAGTGCTCCATCACTTCCTGGGGAGTCCGTaGAGCACCAACATGTGCAGCCATGTCTTCCCAGTTGCCGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DIHANVVLHHFLGSP*STNMCSHVFPVAEA Trigger: GGCTTCGGCAACTGGGAAGACATGGCTGCACATGTTGGTGCTTCACGGACTCCCCAGGAAGTGATGGAGCACTACGTTAGCATGTATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS TCA 90 bp | GATATACATGCTAACGTAGTGCTCCATCACTTCCTGGGGAGTCCGTaGAGCACCAACATGTGCAGCCATGTCTTCCTCGGCCAAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DIHANVVLHHFLGSP*STNMCSHVFLGQAV Trigger: TACTGCTTGGCCGAGGAAGACATGGCTGCACATGTTGGTGCTTCACGGACTCCCCAGGAAGTGATGGAGCACTACGTTAGCATGTATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119916.2 |
||
| CDS TCA 90 bp | GCCTCTCCTTCAGCTTCCGCACATACATGTCTACATGGGCACGCTTaGGCTCTATCTCCACATCATCATCGTCATAGTTCACAGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASPSASAHTCLHGHA*ALSPHHHRHSSQTA Trigger: GGCTGTCTGTGAACTATGACGATGATGATGTGGAGATAGAGCTCAAGCGTGCCCATGTAGACATGTATGTGCGGAAGCTGAAGGAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTAGCAAACTCGCTGTCTTaGCCATCCTCCTTCCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSNNVGGDPRSFGSQAALANSLS*PSSFPL Trigger: AAGGGGGAAGGAGGATGGCAAAGACAGCGAGTTTGC...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTTCAGGGATGCAGGCTTaGCCCAAGTTCCCATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KEQQCWGRPQIIWLTSCFSGMQA*PKFPWI Trigger: TATCCATGGGAACTTGGGCAAAGCCTGCATCCCTGA...AAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTATCAGGGATGCAGGCTTaGCCCAAGTTCCCATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KSNNVGGDPRSFGSQAALSGMQA*PKFPWI Trigger: TATCCATGGGAACTTGGGCAAAGCCTGCATCCCTGA...TAAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCAACAATGTTGGGGGAGACCCCAGATCATTTGGCTCACAAGCTGCTTTTCTACATGGGCACGCTaGAGCTCTATCTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: KEQQCWGRPQIIWLTSCFSTWAR*SSISTS Trigger: TGATGTGGAGATAGAGCTCAAGCGTGCCCATGTAGA...AAAGCAGCTTGTGAGCCAAATGATCTGGGGTCTCCCCCAACATTGTTGCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS-3UTR CAA 90 bp | CCCTATGAGTCAAATTTAAGATTGCTACTATTGCTTCTTCCAGAAGGTCATGAATTTAGAGGGGATCCCTaGCCGCTTCTGGAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PYESNLRLLLLLLPEGHEFRGDP*PLLEVI Trigger: GATCACCTCCAGAAGCGGCAAGGGATCCCCTCTAAA...TTCATGACCTTCTGGAAGAAGCAATAGTAGCAATCTTAAATTTGACTCATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CCA 72 bp | CCGGCCGAGAAGCACTCGGGGCACAGCTCGATGTCCTaGCACTCTGTGCAGCGGAAGCGCAGCGGGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PAEKHSGHSSMS*HSVQRKRSGLT Trigger: GGTGAGCCCGCTGCGCTTCCGCTGCACAGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS GCA 72 bp | AGCACTCGGGGCACAGCTCGATGTCCTGGCACTCTGTaGAGCGGAAGCGCAGCGGGCTCACCTCGGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: STRGTARCPGTL*SGSAAGSPRPS Trigger: GCTTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACAGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS TCA 72 bp | TGGTCCAGCCGCCCTCCGCCTCAGGACCCCAGAGTGTaGATCGTCCGCCGTCTACCAGCTGGTAGCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WSSRPPPQDPRV*IVRRLPAGSRG Trigger: ACCACGGCTACCAGCTGGTAGACGGCGGACGATTCACACTCTGGGGTCCTGAGGCGGAGGGCGGCTGGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS TCA 72 bp | AGGCTAGGCGAGAGAGGGCCTCCACTGGGGCAGGTGTaGTCTGTCACCCGGTTGGGGATGGTGTCAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RLGERGPPLGQV*SVTRLGMVSGM Trigger: CATCCCTGACACCATCCCCAACCGGGTGACAGATCACACCTGCCCCAGTGGAGGCCCTCTCTCGCCTAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CCA 72 bp | GGCCTCCACTGGGGCAGGTGTGATCTGTCACCCGGTTaGGGATGGTGTCAGGGATGCAGGCTTTGCCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLHWGRCDLSPG*GWCQGCRLCPS Trigger: ACTTGGGCAAAGCCTGCATCCCTGACACCATCCCCAACCGGGTGACAGATCACACCTGCCCCAGTGGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CCA 72 bp | CACTGGGGCAGGTGTGATCTGTCACCCGGTTGGGGATaGTGTCAGGGATGCAGGCTTTGCCCAAGTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HWGRCDLSPGWG*CQGCRLCPSSH Trigger: ATGGGAACTTGGGCAAAGCCTGCATCCCTGACACCATCCCCAACCGGGTGACAGATCACACCTGCCCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CCA 72 bp | CCTTGCCCAGGAAGGCTGGCACCAGGTTATAGTCTCTaGCAATGTTCTTCCGGCGCTGCCTCTCCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCPGRLAPGYSL*QCSSGAASPSA Trigger: AGCTGAAGGAGAGGCAGCGCCGGAAGAACATTGCCAGAGACTATAACCTGGTGCCAGCCTTCCTGGGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS TCA 72 bp | GCTAACGTAGTGCTCCATCACTTCCTGGGGAGTCCGTaGAGCACCAACATGTGCAGCCATGTCTTCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ANVVLHHFLGSP*STNMCSHVFLG Trigger: GCCGAGGAAGACATGGCTGCACATGTTGGTGCTTCACGGACTCCCCAGGAAGTGATGGAGCACTACGTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119916.2 |
||
| CDS TCA 72 bp | GCTAACGTAGTGCTCCATCACTTCCTGGGGAGTCCGTaGAGCACCAACATGTGCAGCCATGTCTTCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ANVVLHHFLGSP*STNMCSHVFPV Trigger: AACTGGGAAGACATGGCTGCACATGTTGGTGCTTCACGGACTCCCCAGGAAGTGATGGAGCACTACGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031097.8 |
||
| CDS CCA 72 bp | TATCTGACAGCAGCTCAAACCCAGGAAGGTTCTCAATaGCTGCAAACTCGCTGTCTTTGCCATCCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YLTAAQTQEGSQ*LQTRCLCHPPS Trigger: GGAAGGAGGATGGCAAAGACAGCGAGTTTGCAGCCATTGAGAACCTTCCTGGGTTTGAGCTGCTGTCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CCA 72 bp | TGCCATTGCGCCGGTAGCGCTGCAGCTCTCGAATCTTaGCGCGAAGCATCTTTTCTTTGTGCATATTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CHCAGSAAALES*REASFLCAYFQ Trigger: TTGAAAATATGCACAAAGAAAAGATGCTTCGCGCCAAGATTCGAGAGCTGCAGCGCTACCGGCGCAATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CAA 90 bp | GACCTTGTCCAGATAACTGGGAAGGCGGCTTTTAGAGGGGATCCCTaGCCGCTTCTGGAGGTGATCTTTAATTATAATAGTCTTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLVQITGKAAFRGDP*PLLEVIFNYNSLHS Trigger: ACTGTGAAGACTATTATAATTAAAGATCACCTCCAGAAGCGGCAAGGGATCCCCTCTAAAAGCCGCCTTCCCAGTTATCTGGACAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS TCA 72 bp | TCAGCTTCCGCACATACATGTCTACATGGGCACGCTTaGGCTCTATCTCCACATCATCATCGTCATAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SASAHTCLHGHA*ALSPHHHRHSS Trigger: TGAACTATGACGATGATGATGTGGAGATAGAGCTCAAGCGTGCCCATGTAGACATGTATGTGCGGAAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||
| CDS CAA 72 bp | CAGATAACTGGGAAGGCGGCTTTTAGAGGGGATCCCTaGCCGCTTCTGGAGGTGATCTTTAATTATAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: QITGKAAFRGDP*PLLEVIFNYNS Trigger: ACTATTATAATTAAAGATCACCTCCAGAAGCGGCAAGGGATCCCCTCTAAAAGCCGCCTTCCCAGTTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031097.8 ENSMUST00000119916.2 |
||