Pregenerated sensors for TADA2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018651Ensembl transcript IDs: ENSMUST00000018795.13, ENSMUST00000141852.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATaGTGCGAGGGCCCGTGGTTCTTGTTTGACTTACAAGAGCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: GEMLWPGSLLLPPKP*CEGPWFLFDLQELL Trigger: TAGCAGCTCTTGTAAGTCAAACAAGAACCACGGGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR CCA 90 bp | GTGTGGGAACTTTACTCTCTAGTGCATGGATCTGAGCTGGCCTCTTaGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: VWELYSLVHGSELAS*GEMLWPGSLLLPPK Trigger: CTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCCATGCACTAGAGAGTAAAGTTCCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR-3UTR GCA 90 bp | TATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCAACCTCTTGGGGTGAAATaGTGTGGCCTGGGTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: YPVPPPQESTAHQTARLQPLGVK*CGLGPF Trigger: GAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGG...TTGCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR-3UTR TCA 90 bp | TATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCAACCCGTGGTTCTTGTTTaGCTTACAAGAGCTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: YPVPPPQESTAHQTARLQPVVLV*LTRAAR Trigger: CCTAGCAGCTCTTGTAAGTCAAACAAGAACCACGGG...TTGCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR-3UTR TCA 90 bp | GACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTCATCATCCTGTGTACATTGCCCTCTaGCTGTTCACATTCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: DNSKQRFTEGREESGHHPVYIAL*LFTFLH Trigger: GTGAAGGAATGTGAACAGTCAGAGGGCAATGTACAC...AGGATGATGACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCGCTGCTAGGAACAAATaGCCACTGGTGTTTAATAAT | + |
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Preference number: 2 (lower is better) Translates to: TVKMKFQTDHHGGELHLFAARNK*PLVFNN Trigger: ATTATTAAACACCAGTGGGCATTTGTTCCTAGCAGC...GAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR TCA 72 bp | CTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATaGTGCGAGGGCCCGTGGTTCTTGTTTGACTTACAA | + |
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Preference number: 3 (lower is better) Translates to: LWPGSLLLPPKP*CEGPWFLFDLQ Trigger: TTGTAAGTCAAACAAGAACCACGGGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR CCA 72 bp | CTTTACTCTCTAGTGCATGGATCTGAGCTGGCCTCTTaGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LYSLVHGSELAS*GEMLWPGSLLL Trigger: AAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCCATGCACTAGAGAGTAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR TCA 72 bp | AATAACTTGGCGAACACACACTCTGACGCACTATCCTaGCAACAGCAAGCAGCGCTTTACAGAGGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: NNLANTHSDALS*QQQAALYRGQR Trigger: TCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTCAGGATAGTGCGTCAGAGTGTGTGTTCGCCAAGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR-3UTR CAA 90 bp | GACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACTCCGGAATGTGTACATaGCCCTCTGACTGTTCACAT | + |
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Preference number: 3 (lower is better) Translates to: DITVKMKFQTDHHGGELHSGMCT*PSDCSH Trigger: ATGTGAACAGTCAGAGGGCAATGTACACATTCCGGA...GTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| 3UTR TCA 72 bp | TCATTTAAAATCTGCCTGCAAGAGGGGAAGGCAGAGTaGGTGTGGGAACTTTACTCTCTAGTGCATGGATCT | + |
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Preference number: 3 (lower is better) Translates to: SFKICLQEGKAE*VWELYSLVHGS Trigger: AGATCCATGCACTAGAGAGTAAAGTTCCCACACTCACTCTGCCTTCCCCTCTTGCAGGCAGATTTTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | GGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGCGGCGGAGCCACTGCTaGCACGCACTGCTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GVKCCGLGPFSFHQSHDARRSHC*HALLSW Trigger: CCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCG...CGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | ATATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCATGCCGGCGGAGCCACTaGTGGCACGCACTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ISGATSSRVDCTSDSQTACRRSH*WHALLS Trigger: GGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCA...TGCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | AAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGGCCTTGGCCGCCTCAGCTTaGTTCAGGTTCAGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KCCGLGPFSFHQSHDARALAASA*FRFSRV Trigger: CACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAA...GGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | GGATCTGAGCTGGCCTCTTGGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCGCTGGCATGTAGCCTaGCATGTCCCGAGACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: GSELASWGEMLWPGSLLLRWHVA*HVPRQQ Trigger: TTGCTGTCTCGGGACATGGCAGGCTACATGCCAGCG...AAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | GTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGAGGAGGAGCAGCCTCTaGAGGGCGGCTTATCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VKCCGLGPFSFHQSHDARRRSSL*RAAYQM Trigger: CATCTGATAAGCCGCCCTGCAGAGGCTGCTCCTCCT...CCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | AAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGGCCCTCCTCAATGAAATCTaGCCGCGCTGGCATGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: KCCGLGPFSFHQSHDARALLNEI*PRWHVA Trigger: GGCTACATGCCAGCGCGGGCAGATTTCATTGAGGAG...GGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | TATATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCCCGGGGAGGGTCATCTaGGGAGTGAAATGGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: YIRCHLLKSRLHIRQPDCPGRVI*GVKWNG Trigger: GCCATTCCATTTCACTCCGCAGATGACCCTCCCCGG...GCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | GGATCTGAGCTGGCCTCTTGGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTTGCACTTCGCCTTCCTaGGTTAGAAGCCATCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GSELASWGEMLWPGSLLLCTSPS*VRSHQN Trigger: GTTCTGATGGCTTCTAACTCAGGAAGGCGAAGTGCA...AAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | GGAATGTGTACATTGCCCTCTGACTGTTCACATTCCTTCACGCTGGCCTGCACTGAATCAATGTCAGCCTaGCGGCGGAGCCACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GMCTLPSDCSHSFTLACTESMSA*RRSHCW Trigger: CCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTC...AGTGCAGGCCAGCGTGAAGGAATGTGAACAGTCAGAGGGCAATGTACACATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | AATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGGCCCATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: NAVAWVPSPSTKAMMRGPILGAS*FPFGVQ Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...GGGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | GGATCTGAGCTGGCCTCTTGGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTTCAGGTTCAGCAGGGTaGATGCAAACAGAGGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: GSELASWGEMLWPGSLLLSGSAG*MQTEGY Trigger: ATAACCCTCTGTTTGCATCCACCCTGCTGAACCTGA...AAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | TATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCAACGGAGTGAAATGGAATaGCTGTGTCGGCAGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: YPVPPPQESTAHQTARLQRSEME*LCRQLW Trigger: CCAAAGCTGCCGACACAGCCATTCCATTTCACTCCG...TTGCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | TATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCAAGGTCTTGGACCTCCTTaGGATACCGCCGTTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: YPVPPPQESTAHQTARLQGLGPP*DTAVPL Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAAGACC...TTGCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | CAGAGGGCAGAGAAGAAAGCGGTCATCATCCTTAGACTCCCAGTGTCTCTCCTTGGGTCATCTGCGGAGTaGAATGGAATGGCTGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: QRAEKKAVIILRLPVSLLGSSAE*NGMAVS Trigger: CGACACAGCCATTCCATTTCACTCCGCAGATGACCC...AAGGAGAGACACTGGGAGTCTAAGGATGATGACCGCTTTCTTCTCTGCCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | GTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGGTTTTGGTGCACATTTaGTTAGCCACATCCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VKCCGLGPFSFHQSHDARVLVHI*LATSCQ Trigger: TTGGCAGGATGTGGCTAATCAAATGTGCACCAAAAC...CCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | TATATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCGTACTGGAGAACTTCTaGGAGCATGGTGCGTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: YIRCHLLKSRLHIRQPDCVLENF*EHGAFK Trigger: CTTAAACGCACCATGCTCTCAGAAGTTCTCCAGTAC...GCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | GTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGTGTACCCTTCTCGGATaGGGAAGTCATAGATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VKCCGLGPFSFHQSHDARCTLLG*GSHRFS Trigger: GGAAAATCTATGACTTCCTCATCCGAGAAGGGTACA...CCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTCCGGAATGTGTACATTGCCCTCTGACTGTTCACATTCCTTCACGCTGGACCCGTGAGGTTCAATaGTGGTGCACTTCGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KSPECVHCPLTVHIPSRWTREVQ*WCTSPS Trigger: GGAAGGCGAAGTGCACCACCATTGAACCTCACGGGT...CCAGCGTGAAGGAATGTGAACAGTCAGAGGGCAATGTACACATTCCGGAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | CACTATCCTGACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTTCAATGAACTTGTCGTaGTCCACGGGTCCCACAATC | + |
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Preference number: 4 (lower is better) Translates to: HYPDNSKQRFTEGREESGSMNLS*STGPTI Trigger: GATTGTGGGACCCGTGGAGCACGACAAGTTCATTGA...ACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTCAGGATAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | TATCCGGTGCCACCTCCTCAAGAGTCGACTGCACATCAGACAGCCAGACTGCAACCTTTTCCTTTTCATTaGGTTTCTCTGTACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YPVPPPQESTAHQTARLQPFPFH*VSLYQG Trigger: TCCCTGGTACAGAGAAACTCAATGAAAAGGAAAAGG...TTGCAGTCTGGCTGTCTGATGTGCAGTCGACTCTTGAGGAGGTGGCACCGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | AAGTCTCCGGAATGTGTACATTGCCCTCTGACTGTTCACATTCCTTCACGCTGGACCAACCTCACCACCTaGCAGAGCTCCTTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KSPECVHCPLTVHIPSRWTNLTT*QSSFSF Trigger: AAAGGAAAAGGAGCTCTGTCAGGTGGTGAGGTTGGT...CCAGCGTGAAGGAATGTGAACAGTCAGAGGGCAATGTACACATTCCGGAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | AATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATAGAGTGCCCTTGCTTGTaGCAGTCTCAAGCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NEVSDRPSWGRAPPLHLIECPCL*QSQASL Trigger: CAAGGAGGCTTGAGACTGGCACAAGCAAGGGCACTC...TATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | AAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGGCCTCAAATTCCAATGCATaGCTTTCAATGAACTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: KCCGLGPFSFHQSHDARASNSNA*LSMNLS Trigger: CGACAAGTTCATTGAAAGCCATGCATTGGAATTTGA...GGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | AATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATACTTGATGAGTGCCCTTaGTTGTGCCAGTCTCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NEVSDRPSWGRAPPLHLILDECP*LCQSQA Trigger: GGCTTGAGACTGGCACAAGCAAGGGCACTCATCAAG...TATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | TTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATAAACTAAGAATGCATGGCTTTCAATaGACTTGTCGTGCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: FRQTIMGESSTSSSHKLRMHGFQ*TCRAPR Trigger: CCGTGGAGCACGACAAGTTCATTGAAAGCCATGCAT...TCTTAGTTTATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | TTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATAAACTAAGAGGCCATTTCTTCTTGTaGTGTCCAGCTGGGATCAAG | + |
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Preference number: 4 (lower is better) Translates to: FRQTIMGESSTSSSHKLRGHFFL*CPAGIK Trigger: CTTGATCCCAGCTGGACAGCACAAGAAGAAATGGCC...TCTTAGTTTATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | CACTATCCTGACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTGCTGTCCTATATTCTTaGAGCCTCTTGATTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HYPDNSKQRFTEGREESGAVLYS*SLLISL Trigger: AAGGGAAATCAAGAGGCTCCAAGAATATAGGACAGC...ACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTCAGGATAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | AAGTCTCCGGAATGTGTACATTGCCCTCTGACTGTTCACATTCCTTCACGCTGGACTCAAATCCTCGAGTaGAACACTGTAAACACAGGA | + |
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Preference number: 4 (lower is better) Translates to: KSPECVHCPLTVHIPSRWTQILE*NTVNTG Trigger: TCCTGTGTTTACAGTGTTTCACTCGAGGATTTGAGT...CCAGCGTGAAGGAATGTGAACAGTCAGAGGGCAATGTACACATTCCGGAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR TCA 90 bp | GACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACAAGCCTCCTTGCTTGTaGCACTCGTTCAATAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: DITVKMKFQTDHHGGELHKPPCL*HSFNRA Trigger: TGCTCTATTGAACGAGTGTCACAAGCAAGGAGGCTT...GTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | ACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCGTTCAGCAGGGTGGATaGAAACAGAGGGTTATTGAT | + |
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Preference number: 4 (lower is better) Translates to: TVKMKFQTDHHGGELHLFVQQGG*KQRVID Trigger: ATCAATAACCCTCTGTTTGCATCCACCCTGCTGAAC...GAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | CACTATCCTGACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTAAAATTGGTAATGCCTaGTGTCCTATATTCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HYPDNSKQRFTEGREESGKIGNA*CPIFLE Trigger: CTCCAAGAATATAGGACAGCAGGCATTACCAATTTT...ACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTCAGGATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | TCTCCTTCTTCTCACAGCAAGAATCCAACACAAGTCTCCGGAATGTGTACATTGCTGTCCTGGATGTACTaGAGAACTTCTGAGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: SPSSHSKNPTQVSGMCTLLSWMY*RTSESM Trigger: CATGCTCTCAGAAGTTCTCCAGTACATCCAGGACAG...CAATGTACACATTCCGGAGACTTGTGTTGGATTCTTGCTGTGAGAAGAAGGAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR GCA 90 bp | TCTCCTTCTTCTCACAGCAAGAATCCAACACAAGTCTCCGGAATGTGTACATTGGGGTCCCACAATCCTTaGAAATCTCCTCATTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SPSSHSKNPTQVSGMCTLGSHNP*KSPHCF Trigger: GAAACAATGAGGAGATTTGCAAGGATTGTGGGACCC...CAATGTACACATTCCGGAGACTTGTGTTGGATTCTTGCTGTGAGAAGAAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | AAGCTAGACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCACGCACTGCTGTCCTaGATGTACTGGAGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: KLDITVKMKFQTDHHGGEHALLS*MYWRTS Trigger: AGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTG...CTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTCTAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | AGTACAAAGCTAGACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGATCTGCGGAGTGAAATaGAATGGCTGTGTCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: STKLDITVKMKFQTDHHGICGVK*NGCVGS Trigger: GCTGCCGACACAGCCATTCCATTTCACTCCGCAGAT...CCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTCTAGCTTTGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS-3UTR CCA 90 bp | TTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATAAACTAAGAGCCTCTCTTTTAACCTaGAATGATAGATATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FRQTIMGESSTSSSHKLRASLLT*NDRYPP Trigger: TGGTGGATATCTATCATTCCAGGTTAAAAGAGAGGC...TCTTAGTTTATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR TCA 90 bp | GACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACAAGAACAGGGAAGTCTaGGGTCATTATTTCGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DITVKMKFQTDHHGGELHKNREV*GHYFVS Trigger: ACTTACGAAATAATGACCTCAGACTTCCCTGTTCTT...GTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR GCA 90 bp | AGTACAAAGCTAGACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGTCTATCTTGATGAGTaGCCTTGCTTGTGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: STKLDITVKMKFQTDHHGVYLDE*PCLCQS Trigger: AGACTGGCACAAGCAAGGGCACTCATCAAGATAGAC...CCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTCTAGCTTTGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGACATTACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGGAGTTCAAATTCCAATaGATGGCTTTCAATGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KLDITVKMKFQTDHHGGEEFKFQ*MAFNEL Trigger: AAGTTCATTGAAAGCCATGCATTGGAATTTGAACTC...CTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGTAATGTCTAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS CCA 90 bp | ATGTCAGCCTGCCGGCGGAGCCACTGCTGGCACGCACTGCTGTCCTaGATGTACTGGAGAACTTCTGAGAGCATGGTGCGTTTAAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: MSACRRSHCWHALLS*MYWRTSESMVRLRR Trigger: GCGCCTTAAACGCACCATGCTCTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CCA 90 bp | GGACTCAGCCCAGAATCAATGTCAGCCTGCCGGCGGAGCCACTGCTaGCACGCACTGCTGTCCTGGATGTACTGGAGAACTTCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLSPESMSACRRSHC*HALLSWMYWRTSES Trigger: GCTCTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTCTGGGCTGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS GCA 90 bp | GAAGGACTCAGCCCAGAATCAATGTCAGCCTGCCGGCGGAGCCACTaGTGGCACGCACTGCTGTCCTGGATGTACTGGAGAACTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGLSPESMSACRRSH*WHALLSWMYWRTSE Trigger: CTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTCTGGGCTGAGTCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS-3UTR CAA 90 bp | GGATCTGAGCTGGCCTCTTGGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTGATGAGTGCCCTTGCTaGTGCCAGTCTCAAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSELASWGEMLWPGSLLLDECPC*CQSQAS Trigger: GGAGGCTTGAGACTGGCACAAGCAAGGGCACTCATC...AAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS GCA 90 bp | CAGAATCAATGTCAGCCTGCCGGCGGAGCCACTGCTGGCACGCACTaGTGTCCTGGATGTACTGGAGAACTTCTGAGAGCATGGTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: QNQCQPAGGATAGTH*CPGCTGELLRAWCV Trigger: AACGCACCATGCTCTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGGCCTGGGTCCCTTCTCCTTCCACCAAAGCCATGATGCGAGGGCCTGGCTTTCAATGAACTaGTCGTGCTCCACGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KCCGLGPFSFHQSHDARAWLSMN*SCSTGP Trigger: GGGACCCGTGGAGCACGACAAGTTCATTGAAAGCCA...GGCCCTCGCATCATGGCTTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS CCA 90 bp | GAGGGTCATCTGCGGAGTGAAATGGAATGGCTGTGTCGGCAGCTTTaGCCGCCTCAGCTTGCTTCAGGTTCAGCAGGGTGGATGCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: EGHLRSEMEWLCRQL*PPQLASGSAGWMQT Trigger: TGTTTGCATCCACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAAAGCTGCCGACACAGCCATTCCATTTCACTCCGCAGATGACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | GGATCTGAGCTGGCCTCTTGGGGTGAAATGCTGTGGCCTGGGTCCCTTCTCCTTTCCTTTTCCTTTTCATaGAGTTTCTCTGTACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSELASWGEMLWPGSLLLSFSFS*SFSVPG Trigger: CCCTGGTACAGAGAAACTCAATGAAAAGGAAAAGGA...AAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGCCAGCTCAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCTTTGGCCGCCTCAGCTaGCTTCAGGTTCAGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TVKMKFQTDHHGGELHLFFGRLS*LQVQQG Trigger: ACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAAA...GAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | GACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTCATCATCCTGGTTTTGGTGCACATTaGATTAGCCACATCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DNSKQRFTEGREESGHHPGFGAH*ISHILP Trigger: TGGCAGGATGTGGCTAATCAAATGTGCACCAAAACC...AGGATGATGACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTCTTCTCACAGCAAGAATCCAACACAAGTCTCCGGAATGTGTACATTGAGGTCTTGGACCTCCTaGGGATACCGCCGTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SPSSHSKNPTQVSGMCTLRSWTS*GYRRSI Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAAGACCT...CAATGTACACATTCCGGAGACTTGTGTTGGATTCTTGCTGTGAGAAGAAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | GACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTCATCATCCTTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DNSKQRFTEGREESGHHPYSWSL*ISLRSS Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...AGGATGATGACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | CACTATCCTGACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTTGCTGTCCTATATTCTaGGAGCCTCTTGATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HYPDNSKQRFTEGREESGCCPIF*EPLDFP Trigger: AGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCA...ACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTCAGGATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | GACAACAGCAAGCAGCGCTTTACAGAGGGCAGAGAAGAAAGCGGTCATCATCCTCTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: DNSKQRFTEGREESGHHPLALQK*VMPAVL Trigger: TAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...AGGATGATGACCGCTTTCTTCTCTGCCCTCTGTAAAGCGCTGCTTGCTGTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS GCA 90 bp | ATGGCTTTCAATGAACTTGTCGTGCTCCACGGGTCCCACAATCCTTaGAAATCTCCTCATTGTTTCATAAAGGTCTTGGACCTCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MAFNELVVLHGSHNP*KSPHCFIKVLDLLG Trigger: CCCAAGGAGGTCCAAGACCTTTATGAAACAATGAGGAGATTTGCAAGGATTGTGGGACCCGTGGAGCACGACAAGTTCATTGAAAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS GCA 90 bp | GAAGTCATAGATTTTCCGGGTTTTGTTCACGTCTATCTTGATGAGTaGCCTTGCTTGTGCCAGTCTCAAGCCTCCTTGCTTGTGACACTC | + |
|
Preference number: 5 (lower is better) Translates to: EVIDFPGFVHVYLDE*PCLCQSQASLLVTL Trigger: GAGTGTCACAAGCAAGGAGGCTTGAGACTGGCACAAGCAAGGGCACTCATCAAGATAGACGTGAACAAAACCCGGAAAATCTATGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTTAAAATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCCAGTCTCAAGCCTCCTaGCTTGTGACACTCGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVKMKFQTDHHGGELHLFQSQAS*LVTLVQ Trigger: TTGAACGAGTGTCACAAGCAAGGAGGCTTGAGACTG...GAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATTTTAACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS GCA 90 bp | ATAGATTTTCCGGGTTTTGTTCACGTCTATCTTGATGAGTGCCCTTaGTTGTGCCAGTCTCAAGCCTCCTTGCTTGTGACACTCGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: IDFPGFVHVYLDECP*LCQSQASLLVTLVQ Trigger: TTGAACGAGTGTCACAAGCAAGGAGGCTTGAGACTGGCACAAGCAAGGGCACTCATCAAGATAGACGTGAACAAAACCCGGAAAATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS GCA 90 bp | CTTCGGAGTTCAAATTCCAATGCATGGCTTTCAATGAACTTGTCGTaGTCCACGGGTCCCACAATCCTTGCAAATCTCCTCATTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRSSNSNAWLSMNLS*STGPTILANLLIVS Trigger: TGAAACAATGAGGAGATTTGCAAGGATTGTGGGACCCGTGGAGCACGACAAGTTCATTGAAAGCCATGCATTGGAATTTGAACTCCGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS-3UTR CAA 90 bp | AATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATATTATCAGATGGGTCATaGCTAAAGGAACCCAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: NEVSDRPSWGRAPPLHLILSDGS*LKEPKR Trigger: CCGTTTGGGTTCCTTTAGCAATGACCCATCTGATAA...TATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTCTTCTCACAGCAAGAATCCAACACAAGTCTCCGGAATGTGTACATTGTGTTTCATAAAGGTCTaGGACCTCCTTGGGATACCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSHSKNPTQVSGMCTLCFIKV*DLLGIP Trigger: CGGTATCCCAAGGAGGTCCAAGACCTTTATGAAACA...CAATGTACACATTCCGGAGACTTGTGTTGGATTCTTGCTGTGAGAAGAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTCTTCTCACAGCAAGAATCCAACACAAGTCTCCGGAATGTGTACATTGCGGGTCCCACAATCCTaGCAAATCTCCTCATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSSHSKNPTQVSGMCTLRVPQS*QISSLF Trigger: AAACAATGAGGAGATTTGCAAGGATTGTGGGACCCG...CAATGTACACATTCCGGAGACTTGTGTTGGATTCTTGCTGTGAGAAGAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS-3UTR CAA 90 bp | AATGAAGTTTCAGACAGACCATCATGGGGGAGAGCTCCACCTCTTCATCTCATATTGTTCACGTCTATCTaGATGAGTGCCCTTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NEVSDRPSWGRAPPLHLILFTSI*MSALAC Trigger: ACAAGCAAGGGCACTCATCAAGATAGACGTGAACAA...TATGAGATGAAGAGGTGGAGCTCTCCCCCATGATGGTCTGTCTGAAACTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS GCA 90 bp | CTTCAGGTGATCATATGTCCTGGCACTACAAAAATTGGTAATGCCTaGTGTCCTATATTCTTGGAGCCTCTTGATTTCCCTTCGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQVIICPGTTKIGNA*CPIFLEPLDFPSEF Trigger: GAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAGGACATATGATCACCTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CCA 90 bp | CCATTACAGCTTCTAAAAGGGCCATTTCTTCTTGTGCTGTCCAGCTaGGATCAAGAACAGGGAAGTCTGAGGTCATTATTTCGTAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLQLLKGPFLLVLSS*DQEQGSLRSLFRKC Trigger: ACACTTACGAAATAATGACCTCAGACTTCCCTGTTCTTGATCCCAGCTGGACAGCACAAGAAGAAATGGCCCTTTTAGAAGCTGTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS CCA 90 bp | GTCCTGGCACTACAAAAATTGGTAATGCCTGCTGTCCTATATTCTTaGAGCCTCTTGATTTCCCTTCGGAGTTCAAATTCCAATGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLALQKLVMPAVLYS*SLLISLRSSNSNAW Trigger: CCATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS TCA 72 bp | CGCTGGCATGTAGCCTGCCATGTCCCGAGACAGCAATaGGTCAAAGGCAGGCCGGGGAGGGTCATCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RWHVACHVPRQQ*VKGRPGRVICG Trigger: TCCGCAGATGACCCTCCCCGGCCTGCCTTTGACTCATTGCTGTCTCGGGACATGGCAGGCTACATGCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS GCA 72 bp | TGTCAGCCTGCCGGCGGAGCCACTGCTGGCACGCACTaGTGTCCTGGATGTACTGGAGAACTTCTGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQPAGGATAGTH*CPGCTGELLRA Trigger: TGCTCTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS GCA 72 bp | AGCCCAGAATCAATGTCAGCCTGCCGGCGGAGCCACTaGTGGCACGCACTGCTGTCCTGGATGTACTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPESMSACRRSH*WHALLSWMYWR Trigger: TCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTCTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS GCA 72 bp | AGAACAGAAGGACTCAGCCCAGAATCAATGTCAGCCTaGCGGCGGAGCCACTGCTGGCACGCACTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RTEGLSPESMSA*RRSHCWHALLS Trigger: GGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTCTGGGCTGAGTCCTTCTGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CCA 72 bp | TGCCGGCGGAGCCACTGCTGGCACGCACTGCTGTCCTaGATGTACTGGAGAACTTCTGAGAGCATGGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: CRRSHCWHALLS*MYWRTSESMVR Trigger: ACGCACCATGCTCTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS GCA 72 bp | GGAATGGCTGTGTCGGCAGCTTTGGCCGCCTCAGCTTaGTTCAGGTTCAGCAGGGTGGATGCAAACAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GMAVSAALAASA*FRFSRVDANRG Trigger: CCCTCTGTTTGCATCCACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAAAGCTGCCGACACAGCCATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS CCA 72 bp | CTGCGGAGTGAAATGGAATGGCTGTGTCGGCAGCTTTaGCCGCCTCAGCTTGCTTCAGGTTCAGCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSEMEWLCRQL*PPQLASGSAGW Trigger: CCACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAAAGCTGCCGACACAGCCATTCCATTTCACTCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS CCA 72 bp | CCAGAATCAATGTCAGCCTGCCGGCGGAGCCACTGCTaGCACGCACTGCTGTCCTGGATGTACTGGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: PESMSACRRSHC*HALLSWMYWRT Trigger: AGTTCTCCAGTACATCCAGGACAGCAGTGCGTGCCAGCAGTGGCTCCGCCGGCAGGCTGACATTGATTCTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS TCA 72 bp | GCACGCACTGCTGTCCTGGATGTACTGGAGAACTTCTaGGAGCATGGTGCGTTTAAGGCGCTCCTCCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARTAVLDVLENF*EHGAFKALLLA Trigger: CGCGAGGAGGAGCGCCTTAAACGCACCATGCTCTCAGAAGTTCTCCAGTACATCCAGGACAGCAGTGCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CAA 72 bp | TGGAATGGCTGTGTCGGCAGCTTTGGCCGCCTCAGCTaGCTTCAGGTTCAGCAGGGTGGATGCAAACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WNGCVGSFGRLS*LQVQQGGCKQR Trigger: CCTCTGTTTGCATCCACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAAAGCTGCCGACACAGCCATTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS TCA 72 bp | ACCCGTGAGGTTCAATGGTGGTGCACTTCGCCTTCCTaGGTTAGAAGCCATCAGAACAGAAGGACTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TREVQWWCTSPS*VRSHQNRRTQP Trigger: GGGCTGAGTCCTTCTGTTCTGATGGCTTCTAACTCAGGAAGGCGAAGTGCACCACCATTGAACCTCACGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CAA 90 bp | GGAGTGAAATGGAATGGCTGTGTCGGCAGCTTTGGCCGCCTCAGCTaGCTTCAGGTTCAGCAGGGTGGATGCAAACAGAGGGTTATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GVKWNGCVGSFGRLS*LQVQQGGCKQRVID Trigger: ATCAATAACCCTCTGTTTGCATCCACCCTGCTGAACCTGAAGCAAGCTGAGGCGGCCAAAGCTGCCGACACAGCCATTCCATTTCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
||
| CDS CAA 90 bp | ACTTGTCGTGCTCCACGGGTCCCACAATCCTTGCAAATCTCCTCATaGTTTCATAAAGGTCTTGGACCTCCTTGGGATACCGCCGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TCRAPRVPQSLQISS*FHKGLGPPWDTAVP Trigger: TGGAACGGCGGTATCCCAAGGAGGTCCAAGACCTTTATGAAACAATGAGGAGATTTGCAAGGATTGTGGGACCCGTGGAGCACGACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CAA 72 bp | GCTCCACGGGTCCCACAATCCTTGCAAATCTCCTCATaGTTTCATAAAGGTCTTGGACCTCCTTGGGATACC | + |
|
Preference number: 6 (lower is better) Translates to: APRVPQSLQISS*FHKGLGPPWDT Trigger: GGTATCCCAAGGAGGTCCAAGACCTTTATGAAACAATGAGGAGATTTGCAAGGATTGTGGGACCCGTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS CAA 72 bp | GGTTTTGTTCACGTCTATCTTGATGAGTGCCCTTGCTaGTGCCAGTCTCAAGCCTCCTTGCTTGTGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: GFVHVYLDECPC*CQSQASLLVTL Trigger: GAGTGTCACAAGCAAGGAGGCTTGAGACTGGCACAAGCAAGGGCACTCATCAAGATAGACGTGAACAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS TCA 72 bp | GCCCTTGCTTGTGCCAGTCTCAAGCCTCCTTGCTTGTaGCACTCGTTCAATAGAGCAGACTTATATTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALACASLKPPCL*HSFNRADLYSK Trigger: CTTGGAATATAAGTCTGCTCTATTGAACGAGTGTCACAAGCAAGGAGGCTTGAGACTGGCACAAGCAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
||
| CDS GCA 72 bp | TTTGTTCACGTCTATCTTGATGAGTGCCCTTGCTTGTaGCAGTCTCAAGCCTCCTTGCTTGTGACACTCGTT | + |
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Preference number: 6 (lower is better) Translates to: FVHVYLDECPCL*QSQASLLVTLV Trigger: AACGAGTGTCACAAGCAAGGAGGCTTGAGACTGGCACAAGCAAGGGCACTCATCAAGATAGACGTGAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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| CDS GCA 72 bp | GATTTTCCGGGTTTTGTTCACGTCTATCTTGATGAGTaGCCTTGCTTGTGCCAGTCTCAAGCCTCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: DFPGFVHVYLDE*PCLCQSQASLL Trigger: AAGCAAGGAGGCTTGAGACTGGCACAAGCAAGGGCACTCATCAAGATAGACGTGAACAAAACCCGGAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS GCA 72 bp | TCAAATTCCAATGCATGGCTTTCAATGAACTTGTCGTaGTCCACGGGTCCCACAATCCTTGCAAATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SNSNAWLSMNLS*STGPTILANLL Trigger: GAGGAGATTTGCAAGGATTGTGGGACCCGTGGAGCACGACAAGTTCATTGAAAGCCATGCATTGGAATTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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| CDS CAA 72 bp | CGGAGTTCAAATTCCAATGCATGGCTTTCAATGAACTaGTCGTGCTCCACGGGTCCCACAATCCTTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: RSSNSNAWLSMN*SCSTGPTILAN Trigger: ATTTGCAAGGATTGTGGGACCCGTGGAGCACGACAAGTTCATTGAAAGCCATGCATTGGAATTTGAACTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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| CDS TCA 72 bp | TTGTGCTGTCCAGCTGGGATCAAGAACAGGGAAGTCTaGGGTCATTATTTCGTAAGTGTGATCACTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: LCCPAGIKNREV*GHYFVSVITLM Trigger: CATCAGAGTGATCACACTTACGAAATAATGACCTCAGACTTCCCTGTTCTTGATCCCAGCTGGACAGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS CAA 72 bp | ATGCTTCTCACACTCCTCCTTGGTTTTGGTGCACATTaGATTAGCCACATCCTGCCAATTTCCAAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: MLLTLLLGFGAH*ISHILPISKAT Trigger: TGTGGCTTTGGAAATTGGCAGGATGTGGCTAATCAAATGTGCACCAAAACCAAGGAGGAGTGTGAGAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018795.13 |
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| CDS CAA 72 bp | TTGGTAATGCCTGCTGTCCTATATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCAAATTCCAATGCATGG | + |
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Preference number: 6 (lower is better) Translates to: LVMPAVLYSWSL*ISLRSSNSNAW Trigger: CCATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCAGGCATTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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| CDS CAA 90 bp | TGTCCTGGCACTACAAAAATTGGTAATGCCTGCTGTCCTATATTCTaGGAGCCTCTTGATTTCCCTTCGGAGTTCAAATTCCAATGCATG | + |
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Preference number: 6 (lower is better) Translates to: CPGTTKIGNACCPIF*EPLDFPSEFKFQCM Trigger: CATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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| CDS GCA 72 bp | ATCATATGTCCTGGCACTACAAAAATTGGTAATGCCTaGTGTCCTATATTCTTGGAGCCTCTTGATTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: IICPGTTKIGNA*CPIFLEPLDFP Trigger: AGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAGGACATATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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| CDS CAA 90 bp | CTACAAAAATTGGTAATGCCTGCTGTCCTATATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCAAATTCCAATGCATGGCTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LQKLVMPAVLYSWSL*ISLRSSNSNAWLSM Trigger: CATTGAAAGCCATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATATAGGACAGCAGGCATTACCAATTTTTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018795.13 ENSMUST00000141852.2 |
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