Pregenerated sensors for TACSTD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051397Ensembl transcript IDs: ENSMUST00000058178.6
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAACTGCTCTTCCTTTCCTGAAGGTTGGGAGGCAGGGAGCGAATaGGTCACCAACAACCCGGATAGCCAAATCGCCGCTTTCCCATTT | + |
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Preference number: 1 (lower is better) Translates to: VNCSSFPEGWEAGSE*VTNNPDSQIAAFPF Trigger: AAATGGGAAAGCGGCGATTTGGCTATCCGGGTTGTTGGTGACCCATTCGCTCCCTGCCTCCCAACCTTCAGGAAAGGAAGAGCAGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR TCA 90 bp | GAGAGAAGGAAGAGGTCAAAGCTGGGAGGAAAATTACCTCCTGACTaGGAATTAACAGGCCAACCCATCTGGTCTGAGGTGCCGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: ERRKRSKLGGKLPPD*ELTGQPIWSEVPRK Trigger: CTTCCTCGGCACCTCAGACCAGATGGGTTGGCCTGTTAATTCTCAGTCAGGAGGTAATTTTCCTCCCAGCTTTGACCTCTTCCTTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR TCA 90 bp | ATACAAACGATGGCAGATGAACACTGCGCAGGATCAATTAGTGAGTaGACTGCTCTTCCTTTCCTGAAGGTTGGGAGGCAGGGAGCGAAT | + |
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Preference number: 1 (lower is better) Translates to: IQTMADEHCAGSISE*TALPFLKVGRQGAN Trigger: ATTCGCTCCCTGCCTCCCAACCTTCAGGAAAGGAAGAGCAGTTCACTCACTAATTGATCCTGCGCAGTGTTCATCTGCCATCGTTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR CCA 90 bp | GAAAATGACTTCAGACGTTGGAAATGCCTTTTCTTATACAAACGATaGCAGATGAACACTGCGCAGGATCAATTAGTGAGTGAACTGCTC | + |
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Preference number: 1 (lower is better) Translates to: ENDFRRWKCLFLYKR*QMNTAQDQLVSELL Trigger: GAGCAGTTCACTCACTAATTGATCCTGCGCAGTGTTCATCTGCCATCGTTTGTATAAGAAAAGGCATTTCCAACGTCTGAAGTCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR GCA 90 bp | ATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATaGCTTTTCTTATACAAACGATGGCAGATGAACACTGCGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: MQSNKDIENDFRRWK*LFLYKRWQMNTAQD Trigger: ATCCTGCGCAGTGTTCATCTGCCATCGTTTGTATAAGAAAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR GCA 90 bp | GAACTCTCTAGGATCAGCTACATCAAGGACAAGCAGAAAAATAGATaGAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: ELSRISYIKDKQKNR*SPTKTLKMTSDVGN Trigger: ATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCTATTTTTCTGCTTGTCCTTGATGTAGCTGATCCTAGAGAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGGTAGATTCAAGTCGCTGGGAAACAAGTGGGCTGCCTGGCACTAGCTTCGCGAGGGAGGTGACCTaGGCTCAGCATCTAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LWVDSSRWETSGLPGTSFAREVT*AQHLEN Trigger: GTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTCGC...GAAGCTAGTGCCAGGCAGCCCACTTGTTTCCCAGCGACTTGAATCTACCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAAGGACAGGCCAACCCATCTaGTCTGAGGTGCCGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EGGDLSSASRELVCGERRTGQPI*SEVPRK Trigger: CTTCCTCGGCACCTCAGACCAGATGGGTTGGCCTGT...CCTTCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR-3UTR CCA 90 bp | GGCGAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAGGAAGAGGTCAAAGCTaGGAGGAAAATTACCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GEGGDLSSASRELVCGERGRGQS*EENYLL Trigger: CAGGAGGTAATTTTCCTCCCAGCTTTGACCTCTTCC...TCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR-3UTR GCA 90 bp | AATAGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCCCATCTGGTCTGAGGTaGCGAGGAAGTCGGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: NRCSPTKTLKMTSDVGNAPSGLR*RGSRGI Trigger: GATGCCCCGACTTCCTCGGCACCTCAGACCAGATGG...GGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGACGTTGGAAATGCCTTTTCTTATACAAACGATGGCAGATGAACACTGCAAATTACCTCCTGACTaGGAATTAACAGGCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: LQTLEMPFLIQTMADEHCKLPPD*ELTGQP Trigger: GGGTTGGCCTGTTAATTCTCAGTCAGGAGGTAATTT...GCAGTGTTCATCTGCCATCGTTTGTATAAGAAAAGGCATTTCCAACGTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCGGATCAATTAGTGAGTaGACTGCTCTTCCTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NRCSPTKTLKMTSDVGNAGSISE*TALPFL Trigger: CAGGAAAGGAAGAGCAGTTCACTCACTAATTGATCC...GGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR CCA 72 bp | TCTTCCTTTCCTGAAGGTTGGGAGGCAGGGAGCGAATaGGTCACCAACAACCCGGATAGCCAAATCGCCGCT | + |
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Preference number: 3 (lower is better) Translates to: SSFPEGWEAGSE*VTNNPDSQIAA Trigger: AGCGGCGATTTGGCTATCCGGGTTGTTGGTGACCCATTCGCTCCCTGCCTCCCAACCTTCAGGAAAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR TCA 72 bp | AAGAGGTCAAAGCTGGGAGGAAAATTACCTCCTGACTaGGAATTAACAGGCCAACCCATCTGGTCTGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: KRSKLGGKLPPD*ELTGQPIWSEV Trigger: CACCTCAGACCAGATGGGTTGGCCTGTTAATTCTCAGTCAGGAGGTAATTTTCCTCCCAGCTTTGACCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR CCA 72 bp | TCAAACCGTTTAAGTCTTTGGGTAGATTCAAGTCGCTaGGAAACAAGTGGGCTGCCTGGCACTAGCTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: SNRLSLWVDSSR*ETSGLPGTSFL Trigger: TAAGAAGCTAGTGCCAGGCAGCCCACTTGTTTCCCAGCGACTTGAATCTACCCAAAGACTTAAACGGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR CCA 72 bp | AATCGCCGCTTTCCCATTTCAAACCGTTTAAGTCTTTaGGTAGATTCAAGTCGCTGGGAAACAAGTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: NRRFPISNRLSL*VDSSRWETSGL Trigger: CAGCCCACTTGTTTCCCAGCGACTTGAATCTACCCAAAGACTTAAACGGTTTGAAATGGGAAAGCGGCGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| 3UTR GCA 72 bp | AACAAAGACATTGAAAATGACTTCAGACGTTGGAAATaGCTTTTCTTATACAAACGATGGCAGATGAACACT | + |
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Preference number: 3 (lower is better) Translates to: NKDIENDFRRWK*LFLYKRWQMNT Trigger: AGTGTTCATCTGCCATCGTTTGTATAAGAAAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | CTTTGGGTAGATTCAAGTCGCTGGGAAACAAGTGGGCTGCCTGGCACTAGCTTCCGGTCGGTCGGGCGGTaGCGCAACTCAATGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LWVDSSRWETSGLPGTSFRSVGR*RNSMRM Trigger: CATCCTCATTGAGTTGCGCCACCGCCCGACCGACCG...GAAGCTAGTGCCAGGCAGCCCACTTGTTTCCCAGCGACTTGAATCTACCCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAAGGCAGCACACCGAGGTCTaGTTGCACTGGCGCGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EGGDLSSASRELVCGERRQHTEV*LHWRAL Trigger: CAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTG...CCTTCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAAGGTCGCAGCGCAGGCTTTaGTCTCCCTTGTCCGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: EGGDLSSASRELVCGERRSQRRL*SPLSVR Trigger: CCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGA...CCTTCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GATTCAAGTCGCTGGGAAACAAGTGGGCTGCCTGGCACTAGCTTCTTAACCAAGTTGGCAGACCCCGCCTaGGCCATTTGTGTCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: DSSRWETSGLPGTSFLTKLADPA*AICVAD Trigger: GTCTGCGACACAAATGGCCCAGGCGGGGTCTGCCAA...CTTGGTTAAGAAGCTAGTGCCAGGCAGCCCACTTGTTTCCCAGCGACTTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAAGGCCGCGGATAGGAAGCTaGGGTGCAGCTTGTAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: EGGDLSSASRELVCGERRPRIGS*GAACSV Trigger: AACGCTACAAGCTGCACCCCAGCTTCCTATCCGCGG...CCTTCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GGCGAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGATCAATGAGGATGTGGTaGGTTCGCACCACTTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: GEGGDLSSASRELVCGERSMRMW*VRTTSS Trigger: CGACGAAGTGGTGCGAACCCACCACATCCTCATTGA...TCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR GCA 90 bp | AGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTTCGGCATCACCAGGCTaGGGCCGCTCTTCCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RCSPTKTLKMTSDVGNAFSASPG*GRSSGR Trigger: GCGCCCGGAAGAGCGGCCGCAGCCTGGTGATGCCGA...AAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GGCGAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAAGACCGTCATCTTGTTaGTGGGGCATGTACAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GEGGDLSSASRELVCGERRPSSC*WGMYSC Trigger: GCAACTGTACATGCCCCACCAACAAGATGACGGTCT...TCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | CTTCAGACGTTGGAAATGCCTTTTCTTATACAAACGATGGCAGATGAACACTGCGAGGTCTGGTTGCACTaGCGCGCCTTGAAGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LQTLEMPFLIQTMADEHCEVWLH*RALKRP Trigger: GGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTC...GCAGTGTTCATCTGCCATCGTTTGTATAAGAAAAGGCATTTCCAACGTCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR GCA 90 bp | TGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTTCTGGTCTCCCTTGTCCGTaGGGCGCACGCCCACCGAGT | + |
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Preference number: 4 (lower is better) Translates to: CSPTKTLKMTSDVGNAFSGLPCP*GARPPS Trigger: ACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACC...AGAAAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | GATTCAAGTCGCTGGGAAACAAGTGGGCTGCCTGGCACTAGCTTCTTAACCAAGACTTGGAAGTTAGCGTaGAGCAGTCGACCAATACCT | + |
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Preference number: 4 (lower is better) Translates to: DSSRWETSGLPGTSFLTKTWKLA*SSRPIP Trigger: AGGTATTGGTCGACTGCTCCACGCTAACTTCCAAGT...CTTGGTTAAGAAGCTAGTGCCAGGCAGCCCACTTGTTTCCCAGCGACTTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR TCA 90 bp | ACAAAAGAGAACTCTCTAGGATCAGCTACATCAAGGACAAGCAGAAAAATAGATTGCACTGGCGCGCCTTaGAGCGGCCCTTGTCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TKENSLGSATSRTSRKIDCTGAP*SGPCRH Trigger: GTGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCA...ATCTATTTTTCTGCTTGTCCTTGATGTAGCTGATCCTAGAGAGTTCTCTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | CGGATAGCCAAATCGCCGCTTTCCCATTTCAAACCGTTTAAGTCTTTGGGTAGAAACTCAATGAGGATGTaGTGGGTTCGCACCACTTCG | + |
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Preference number: 4 (lower is better) Translates to: RIAKSPLSHFKPFKSLGRNSMRM*WVRTTS Trigger: CGAAGTGGTGCGAACCCACCACATCCTCATTGAGTT...TCTACCCAAAGACTTAAACGGTTTGAAATGGGAAAGCGGCGATTTGGCTATCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | CGGATAGCCAAATCGCCGCTTTCCCATTTCAAACCGTTTAAGTCTTTGGGTAGAGCTCTATCTGAATGGTaGGCTCCTCATAGTGTACCG | + |
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Preference number: 4 (lower is better) Translates to: RIAKSPLSHFKPFKSLGRALSEW*APHSVP Trigger: CGGTACACTATGAGGAGCCCACCATTCAGATAGAGC...TCTACCCAAAGACTTAAACGGTTTGAAATGGGAAAGCGGCGATTTGGCTATCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR TCA 90 bp | AAGGACAAGCAGAAAAATAGATGCAGTCCAACAAAGACATTGAAAATGACTTCACGCTCATGCGCGCCTTaGGCAGCAGGCACTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KDKQKNRCSPTKTLKMTSRSCAP*AAGTWK Trigger: CTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCG...TGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCTATTTTTCTGCTTGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR TCA 90 bp | AGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTGGTGGCGCAACTCAATaGGGATGTGGTGGGTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: RCSPTKTLKMTSDVGNAFGGATQ*GCGGFA Trigger: TGCGAACCCACCACATCCTCATTGAGTTGCGCCACC...AAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR TCA 90 bp | TGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTTCTACTTCCTCCGTTTGGTaGCCACCAAGACCACCACAC | + |
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Preference number: 4 (lower is better) Translates to: CSPTKTLKMTSDVGNAFSTSSVW*PPRPPH Trigger: GTGTGGTGGTCTTGGTGGTCACCAAACGGAGGAAGT...AGAAAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS-3UTR CCA 90 bp | AATAGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCCCGTCATCTTGTTGGTaGGGCATGTACAGTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NRCSPTKTLKMTSDVGNAPSSCW*GMYSCS Trigger: AGAGCAACTGTACATGCCCCACCAACAAGATGACGG...GGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | GTGCGGCGCACGCCCACCGAGTTTACGCACCAGCACACCGAGGTCTaGTTGCACTGGCGCGCCTTGAAGCGGCCCTTGTCGTCACACTCC | + |
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Preference number: 5 (lower is better) Translates to: VRRTPTEFTHQHTEV*LHWRALKRPLSSHS Trigger: GGAGTGTGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGTGCGTAAACTCGGTGGGCGTGCGCCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS GCA 90 bp | TTCGCACCACTTCGTCGCAGCGCAGGCTTTGGTCTCCCTTGTCCGTaGGGCGCACGCCCACCGAGTTTACGCACCAGCACACCGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: FAPLRRSAGFGLPCP*GARPPSLRTSTPRS Trigger: AGACCTCGGTGTGCTGGTGCGTAAACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS TCA 90 bp | GCATCACCAGGCTGCGGCCGCTCTTCCGGGCGCTCATGCGCGCCTTaGGCAGCAGGCACTTGGAAGTTAGCGTGGAGCAGTCGACCAATA | + |
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Preference number: 5 (lower is better) Translates to: ASPGCGRSSGRSCAP*AAGTWKLAWSSRPI Trigger: TATTGGTCGACTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGCCCGGAAGAGCGGCCGCAGCCTGGTGATGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | ATGAGGATGTGGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTTTaGTCTCCCTTGTCCGTGCGGCGCACGCCCACCGAGTTTACGCAC | + |
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Preference number: 5 (lower is better) Translates to: MRMWWVRTTSSQRRL*SPLSVRRTPTEFTH Trigger: GTGCGTAAACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCACATCCTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | AAGGCTCGGTCGGTCGGGCGGTGGCGCAACTCAATGAGGATGTGGTaGGTTCGCACCACTTCGTCGCAGCGCAGGCTTTGGTCTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KARSVGRWRNSMRMW*VRTTSSQRRLWSPL Trigger: CAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCACATCCTCATTGAGTTGCGCCACCGCCCGACCGACCGAGCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | TTGAAGGCTCGGTCGGTCGGGCGGTGGCGCAACTCAATGAGGATGTaGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTTTGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LKARSVGRWRNSMRM*WVRTTSSQRRLWSP Trigger: GGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCACATCCTCATTGAGTTGCGCCACCGCCCGACCGACCGAGCCTTCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS TCA 90 bp | AGTTTACGCACCAGCACACCGAGGTCTGGTTGCACTGGCGCGCCTTaGAGCGGCCCTTGTCGTCACACTCCGGGTCGTAGAGGCCATCGT | + |
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Preference number: 5 (lower is better) Translates to: SLRTSTPRSGCTGAP*SGPCRHTPGRRGHR Trigger: ACGATGGCCTCTACGACCCGGAGTGTGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGTGCGTAAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS TCA 90 bp | TTCCCCACGCACCTGCACGTCCAGGCCGCGGCGGCCCATGAACAGTaGCTCGCCTTTAATGTCCCTTTCGAAGTAGTAGGCGGCATCAGC | + |
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Preference number: 5 (lower is better) Translates to: FPTHLHVQAAAAHEQ*LAFNVPFEVVGGIS Trigger: GCTGATGCCGCCTACTACTTCGAAAGGGACATTAAAGGCGAGTCACTGTTCATGGGCCGCCGCGGCCTGGACGTGCAGGTGCGTGGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | TCGGAGTCTAGGTCAGAGTGGTTGAAGGCTCGGTCGGTCGGGCGGTaGCGCAACTCAATGAGGATGTGGTGGGTTCGCACCACTTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: SESRSEWLKARSVGR*RNSMRMWWVRTTSS Trigger: CGACGAAGTGGTGCGAACCCACCACATCCTCATTGAGTTGCGCCACCGCCCGACCGACCGAGCCTTCAACCACTCTGACCTAGACTCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | AGACCCCGCCTGGGCCATTTGTGTCGCAGACCGTCATCTTGTTGGTaGGGCATGTACAGTTGCTCTGAGCCGTGCAAAAGCGGGTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: RPRLGHLCRRPSSCW*GMYSCSEPCKSGSP Trigger: TGGCGACCCGCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCGACACAAATGGCCCAGGCGGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CCA 90 bp | AGCGTGGAGCAGTCGACCAATACCTGTGAGCCCATTGCCCGACATTaGCAGACCCCGCCTGGGCCATTTGTGTCGCAGACCGTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: SVEQSTNTCEPIARH*QTPPGPFVSQTVIL Trigger: CAAGATGACGGTCTGCGACACAAATGGCCCAGGCGGGGTCTGCCAATGTCGGGCAATGGGCTCACAGGTATTGGTCGACTGCTCCACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS TCA 90 bp | GTGTCGCAGACCGTCATCTTGTTGGTGGGGCATGTACAGTTGCTCTaGGCCGTGCAAAAGCGGGTCGCCATCGCCAGCAGTAGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSQTVILLVGHVQLL*AVQKRVAIASSSSS Trigger: GCTACTGCTACTGCTGGCGATGGCGACCCGCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS GCA 90 bp | AGACCGTCATCTTGTTGGTGGGGCATGTACAGTTGCTCTGAGCCGTaGAAAAGCGGGTCGCCATCGCCAGCAGTAGCAGTAGCAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPSSCWWGMYSCSEP*KSGSPSPAVAVAAV Trigger: CACCGCTGCTACTGCTACTGCTGGCGATGGCGACCCGCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 90 bp | CTATCTGAATGGTGGGCTCCTCATAGTGTACCGCGGATAGGAAGCTaGGGTGCAGCTTGTAGCGTTCTTGGAAGAGCCGCCGCAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSEWWAPHSVPRIGS*GAACSVLGRAAAAR Trigger: CCGAGCTGCGGCGGCTCTTCCAAGAACGCTACAAGCTGCACCCCAGCTTCCTATCCGCGGTACACTATGAGGAGCCCACCATTCAGATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGAAGGAGGCTTTGGTCTCCCTaGTCCGTGCGGCGCACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGGDLSSASRELVCGERRRLWSP*SVRRTP Trigger: GGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCT...CCTTCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 90 bp | TCAAGCCCTTCTGCGACGCGTTCTGCCGAAGCTCTATCTGAATGGTaGGCTCCTCATAGTGTACCGCGGATAGGAAGCTGGGGTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSATRSAEALSEW*APHSVPRIGSWGAA Trigger: AGCTGCACCCCAGCTTCCTATCCGCGGTACACTATGAGGAGCCCACCATTCAGATAGAGCTTCGGCAGAACGCGTCGCAGAAGGGCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | GATTCAAGTCGCTGGGAAACAAGTGGGCTGCCTGGCACTAGCTTCTTAACCAAGGCCTTGAAGCGGCCCTaGTCGTCACACTCCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DSSRWETSGLPGTSFLTKALKRP*SSHSGS Trigger: CGACCCGGAGTGTGACGACAAGGGCCGCTTCAAGGC...CTTGGTTAAGAAGCTAGTGCCAGGCAGCCCACTTGTTTCCCAGCGACTTGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS GCA 90 bp | CATTTGTGTCGCAGACCGTCATCTTGTTGGTGGGGCATGTACAGTTaGTCTGAGCCGTGCAAAAGCGGGTCGCCATCGCCAGCAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLCRRPSSCWWGMYS*SEPCKSGSPSPAVA Trigger: TGCTACTGCTGGCGATGGCGACCCGCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCGACACAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | GGCGAGGGAGGTGACCTGAGCTCAGCATCTAGAGAACTTGTTTGTGGAGAGAGATTGAGCAGCAGGCACTaGGAAGTTAGCGTGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEGGDLSSASRELVCGERLSSRH*EVSVEQ Trigger: CTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAA...TCTCTCTCCACAAACAAGTTCTCTAGATGCTGAGCTCAGGTCACCTCCCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | CGGATAGCCAAATCGCCGCTTTCCCATTTCAAACCGTTTAAGTCTTTGGGTAGACAGCTTGTAGCGTTCTaGGAAGAGCCGCCGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIAKSPLSHFKPFKSLGRQLVAF*EEPPQL Trigger: GAGCTGCGGCGGCTCTTCCAAGAACGCTACAAGCTG...TCTACCCAAAGACTTAAACGGTTTGAAATGGGAAAGCGGCGATTTGGCTATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | AGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTGTCGCAGCGCAGGCTTaGGTCTCCCTTGTCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RCSPTKTLKMTSDVGNAFVAAQA*VSLVRA Trigger: CGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGAC...AAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | GAAAATGACTTCAGACGTTGGAAATGCCTTTTCTTATACAAACGATGGCAGATGGCGCTCATGCGCGCCTaGAGCAGCAGGCACTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ENDFRRWKCLFLYKRWQMALMRA*SSRHLE Trigger: TTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGC...CATCTGCCATCGTTTGTATAAGAAAAGGCATTTCCAACGTCTGAAGTCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTTCTTTGCACTGGCGCGCCTaGAAGCGGCCCTTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSPTKTLKMTSDVGNAFSLHWRA*KRPLSS Trigger: TGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAA...AGAAAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGAGAACTCTCTAGGATCAGCTACATCAAGGACAAGCAGAAAAATAGATCACACCGAGGTCTGGTaGCACTGGCGCGCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TKENSLGSATSRTSRKIDHTEVW*HWRALK Trigger: CTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTG...ATCTATTTTTCTGCTTGTCCTTGATGTAGCTGATCCTAGAGAGTTCTCTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS-3UTR CAA 90 bp | AGATGCAGTCCAACAAAGACATTGAAAATGACTTCAGACGTTGGAAATGCCTTTCAGACCGTCATCTTGTaGGTGGGGCATGTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCSPTKTLKMTSDVGNAFQTVIL*VGHVQL Trigger: CAACTGTACATGCCCCACCAACAAGATGACGGTCTG...AAAGGCATTTCCAACGTCTGAAGTCATTTTCAATGTCTTTGTTGGACTGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS GCA 72 bp | AGCGTCCGCTCCACATGCAGGGGTTCCCCACGCACCTaGACGTCCAGGCCGCGGCGGCCCATGAACAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVRSTCRGSPRT*TSRPRRPMNSD Trigger: GTCACTGTTCATGGGCCGCCGCGGCCTGGACGTGCAGGTGCGTGGGGAACCCCTGCATGTGGAGCGGACGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | CGGCGCACGCCCACCGAGTTTACGCACCAGCACACCGAGGTCTGGTaGCACTGGCGCGCCTTGAAGCGGCCCTTGTCGTCACACTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRTPTEFTHQHTEVW*HWRALKRPLSSHSG Trigger: CCCGGAGTGTGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGTGCGTAAACTCGGTGGGCGTGCGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | TGGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTTTaGTCTCCCTTGTCCGTGCGGCGCACGCCCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: WWVRTTSSQRRL*SPLSVRRTPTE Trigger: CTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | GTGGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTTaGGTCTCCCTTGTCCGTGCGGCGCACGCCCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: VVGSHHFVAAQA*VSLVRAAHAHR Trigger: TCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS TCA 72 bp | GGCTGCGGCCGCTCTTCCGGGCGCTCATGCGCGCCTTaGGCAGCAGGCACTTGGAAGTTAGCGTGGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCGRSSGRSCAP*AAGTWKLAWSS Trigger: ACTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGCCCGGAAGAGCGGCCGCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | TGGAAGAGCCGCCGCAGCTCGGAGTCTAGGTCAGAGTaGTTGAAGGCTCGGTCGGTCGGGCGGTGGCGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: WKSRRSSESRSE*LKARSVGRWRN Trigger: GTTGCGCCACCGCCCGACCGACCGAGCCTTCAACCACTCTGACCTAGACTCCGAGCTGCGGCGGCTCTTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | AGGCTGCGGCCGCTCTTCCGGGCGCTCATGCGCGCCTaGAGCAGCAGGCACTTGGAAGTTAGCGTGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRPLFRALMRA*SSRHLEVSVEQ Trigger: CTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGCCCGGAAGAGCGGCCGCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | CGCACCACTTCGTCGCAGCGCAGGCTTTGGTCTCCCTaGTCCGTGCGGCGCACGCCCACCGAGTTTACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTTSSQRRLWSP*SVRRTPTEFTH Trigger: GTGCGTAAACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | TGGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTTTGGTCTCCCTaGTCCGTGCGGCGCACGCCCACCGAGTTTACGCACCAGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: WWVRTTSSQRRLWSP*SVRRTPTEFTHQHT Trigger: GGTGTGCTGGTGCGTAAACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS TCA 72 bp | AGAGCCGCCGCAGCTCGGAGTCTAGGTCAGAGTGGTTaGAGGCTCGGTCGGTCGGGCGGTGGCGCAACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RAAAARSLGQSG*RLGRSGGGATQ Trigger: TTGAGTTGCGCCACCGCCCGACCGACCGAGCCTTCAACCACTCTGACCTAGACTCCGAGCTGCGGCGGCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS GCA 72 bp | CTTCGTCGCAGCGCAGGCTTTGGTCTCCCTTGTCCGTaGGGCGCACGCCCACCGAGTTTACGCACCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LRRSAGFGLPCP*GARPPSLRTST Trigger: TGTGCTGGTGCGTAAACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | ACGCCCACCGAGTTTACGCACCAGCACACCGAGGTCTaGTTGCACTGGCGCGCCTTGAAGCGGCCCTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TPTEFTHQHTEV*LHWRALKRPLS Trigger: CGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGTGCGTAAACTCGGTGGGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | CGGTCGGTCGGGCGGTGGCGCAACTCAATGAGGATGTaGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSVGRWRNSMRM*WVRTTSSQRRL Trigger: AAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCACATCCTCATTGAGTTGCGCCACCGCCCGACCGACCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | AAGAGCCGCCGCAGCTCGGAGTCTAGGTCAGAGTGGTaGAAGGCTCGGTCGGTCGGGCGGTGGCGCAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: KSRRSSESRSEW*KARSVGRWRNS Trigger: TGAGTTGCGCCACCGCCCGACCGACCGAGCCTTCAACCACTCTGACCTAGACTCCGAGCTGCGGCGGCTCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | GGCATCACCAGGCTGCGGCCGCTCTTCCGGGCGCTCATGCGCGCCTaGAGCAGCAGGCACTTGGAAGTTAGCGTGGAGCAGTCGACCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GITRLRPLFRALMRA*SSRHLEVSVEQSTN Trigger: ATTGGTCGACTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGCCCGGAAGAGCGGCCGCAGCCTGGTGATGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS TCA 72 bp | ACCAGCACACCGAGGTCTGGTTGCACTGGCGCGCCTTaGAGCGGCCCTTGTCGTCACACTCCGGGTCGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSTPRSGCTGAP*SGPCRHTPGRR Trigger: TCTACGACCCGGAGTGTGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | TCGGTCGGGCGGTGGCGCAACTCAATGAGGATGTGGTaGGTTCGCACCACTTCGTCGCAGCGCAGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVGRWRNSMRMW*VRTTSSQRRLW Trigger: CCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCACATCCTCATTGAGTTGCGCCACCGCCCGACCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | CCCACCGAGTTTACGCACCAGCACACCGAGGTCTGGTaGCACTGGCGCGCCTTGAAGCGGCCCTTGTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PTEFTHQHTEVW*HWRALKRPLSS Trigger: TGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGTGCGTAAACTCGGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | CGGCCGCTCTTCCGGGCGCTCATGCGCGCCTTGAGCAGCAGGCACTaGGAAGTTAGCGTGGAGCAGTCGACCAATACCTGTGAGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RPLFRALMRALSSRH*EVSVEQSTNTCEPI Trigger: AATGGGCTCACAGGTATTGGTCGACTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGCCCGGAAGAGCGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | AATGAGGATGTGGTGGGTTCGCACCACTTCGTCGCAGCGCAGGCTTaGGTCTCCCTTGTCCGTGCGGCGCACGCCCACCGAGTTTACGCA | + |
|
Preference number: 6 (lower is better) Translates to: NEDVVGSHHFVAAQA*VSLVRAAHAHRVYA Trigger: TGCGTAAACTCGGTGGGCGTGCGCCGCACGGACAAGGGAGACCAAAGCCTGCGCTGCGACGAAGTGGTGCGAACCCACCACATCCTCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | CGTTCTTGGAAGAGCCGCCGCAGCTCGGAGTCTAGGTCAGAGTGGTaGAAGGCTCGGTCGGTCGGGCGGTGGCGCAACTCAATGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RSWKSRRSSESRSEW*KARSVGRWRNSMRM Trigger: CATCCTCATTGAGTTGCGCCACCGCCCGACCGACCGAGCCTTCAACCACTCTGACCTAGACTCCGAGCTGCGGCGGCTCTTCCAAGAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | GAGTTTACGCACCAGCACACCGAGGTCTGGTTGCACTaGCGCGCCTTGAAGCGGCCCTTGTCGTCACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: EFTHQHTEVWLH*RALKRPLSSHS Trigger: GGAGTGTGACGACAAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACCTCGGTGTGCTGGTGCGTAAACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | AGGTCAGAGTGGTTGAAGGCTCGGTCGGTCGGGCGGTaGCGCAACTCAATGAGGATGTGGTGGGTTCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RSEWLKARSVGR*RNSMRMWWVRT Trigger: GGTGCGAACCCACCACATCCTCATTGAGTTGCGCCACCGCCCGACCGACCGAGCCTTCAACCACTCTGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | CCATTGCCCGACATTGGCAGACCCCGCCTGGGCCATTaGTGTCGCAGACCGTCATCTTGTTGGTGGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PLPDIGRPRLGH*CRRPSSCWWGM Trigger: CATGCCCCACCAACAAGATGACGGTCTGCGACACAAATGGCCCAGGCGGGGTCTGCCAATGTCGGGCAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | CCTGTGAGCCCATTGCCCGACATTGGCAGACCCCGCCTGGGCCATTaGTGTCGCAGACCGTCATCTTGTTGGTGGGGCATGTACAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVSPLPDIGRPRLGH*CRRPSSCWWGMYSC Trigger: GCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCGACACAAATGGCCCAGGCGGGGTCTGCCAATGTCGGGCAATGGGCTCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS TCA 72 bp | CACCTGCACGTCCAGGCCGCGGCGGCCCATGAACAGTaGCTCGCCTTTAATGTCCCTTTCGAAGTAGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HLHVQAAAAHEQ*LAFNVPFEVVG Trigger: GCCTACTACTTCGAAAGGGACATTAAAGGCGAGTCACTGTTCATGGGCCGCCGCGGCCTGGACGTGCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS GCA 72 bp | CGCAGACCGTCATCTTGTTGGTGGGGCATGTACAGTTaGTCTGAGCCGTGCAAAAGCGGGTCGCCATCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPSSCWWGMYS*SEPCKSGSPSP Trigger: TGGCGATGGCGACCCGCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | TGGTGGGCTCCTCATAGTGTACCGCGGATAGGAAGCTaGGGTGCAGCTTGTAGCGTTCTTGGAAGAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: WWAPHSVPRIGS*GAACSVLGRAA Trigger: GGCGGCTCTTCCAAGAACGCTACAAGCTGCACCCCAGCTTCCTATCCGCGGTACACTATGAGGAGCCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | TTAGCGTGGAGCAGTCGACCAATACCTGTGAGCCCATaGCCCGACATTGGCAGACCCCGCCTGGGCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAWSSRPIPVSP*PDIGRPRLGHL Trigger: CAAATGGCCCAGGCGGGGTCTGCCAATGTCGGGCAATGGGCTCACAGGTATTGGTCGACTGCTCCACGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 72 bp | TTCCGGGCGCTCATGCGCGCCTTGAGCAGCAGGCACTaGGAAGTTAGCGTGGAGCAGTCGACCAATACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FRALMRALSSRH*EVSVEQSTNTC Trigger: ACAGGTATTGGTCGACTGCTCCACGCTAACTTCCAAGTGCCTGCTGCTCAAGGCGCGCATGAGCGCCCGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | ACTTGGAAGTTAGCGTGGAGCAGTCGACCAATACCTGTGAGCCCATaGCCCGACATTGGCAGACCCCGCCTGGGCCATTTGTGTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TWKLAWSSRPIPVSP*PDIGRPRLGHLCRR Trigger: TCTGCGACACAAATGGCCCAGGCGGGGTCTGCCAATGTCGGGCAATGGGCTCACAGGTATTGGTCGACTGCTCCACGCTAACTTCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS TCA 72 bp | ACCGTCATCTTGTTGGTGGGGCATGTACAGTTGCTCTaGGCCGTGCAAAAGCGGGTCGCCATCGCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TVILLVGHVQLL*AVQKRVAIASS Trigger: ACTGCTGGCGATGGCGACCCGCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | CGCCTGGGCCATTTGTGTCGCAGACCGTCATCTTGTTaGTGGGGCATGTACAGTTGCTCTGAGCCGTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RLGHLCRRPSSC*WGMYSCSEPCK Trigger: TTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCGACACAAATGGCCCAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | TCTGCGACGCGTTCTGCCGAAGCTCTATCTGAATGGTaGGCTCCTCATAGTGTACCGCGGATAGGAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SATRSAEALSEW*APHSVPRIGSW Trigger: CCAGCTTCCTATCCGCGGTACACTATGAGGAGCCCACCATTCAGATAGAGCTTCGGCAGAACGCGTCGCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CCA 72 bp | CTGGGCCATTTGTGTCGCAGACCGTCATCTTGTTGGTaGGGCATGTACAGTTGCTCTGAGCCGTGCAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGHLCRRPSSCW*GMYSCSEPCKS Trigger: GCTTTTGCACGGCTCAGAGCAACTGTACATGCCCCACCAACAAGATGACGGTCTGCGACACAAATGGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
||
| CDS CAA 90 bp | AGCTCCTTAAGCTCCACCTTTTTGTATTTGCCCGACTTCCTCCGTTaGGTGACCACCAAGACCACCACACCAGCCACTACCGCTACCGAG | + |
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Preference number: 6 (lower is better) Translates to: SSLSSTFLYLPDFLR*VTTKTTTPATTATE Trigger: CTCGGTAGCGGTAGTGGCTGGTGTGGTGGTCTTGGTGGTCACCAAACGGAGGAAGTCGGGCAAATACAAAAAGGTGGAGCTTAAGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CAA 72 bp | AGCTCCACCTTTTTGTATTTGCCCGACTTCCTCCGTTaGGTGACCACCAAGACCACCACACCAGCCACTACC | + |
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Preference number: 6 (lower is better) Translates to: SSTFLYLPDFLR*VTTKTTTPATT Trigger: GGTAGTGGCTGGTGTGGTGGTCTTGGTGGTCACCAAACGGAGGAAGTCGGGCAAATACAAAAAGGTGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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| CDS CAA 72 bp | ATCTCCCCCAGCTCCTTAAGCTCCACCTTTTTGTATTaGCCCGACTTCCTCCGTTTGGTGACCACCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: ISPSSLSSTFLY*PDFLRLVTTKT Trigger: GGTCTTGGTGGTCACCAAACGGAGGAAGTCGGGCAAATACAAAAAGGTGGAGCTTAAGGAGCTGGGGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058178.6 |
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