Pregenerated sensors for TACR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028172Ensembl transcript IDs: ENSMUST00000029822.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGTTCATGACTTTGATTTTCTTTGCATGGCAGTGGGAAGCAGCTaGCTCAGGGACTTGGAGATGCTGGTGTCTGGCTTGATGACGTCT | + |
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Preference number: 1 (lower is better) Translates to: KVHDFDFLCMAVGSS*LRDLEMLVSGLMTS Trigger: AGACGTCATCAAGCCAGACACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGTCATGAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR GCA 90 bp | GGATGCCATGATATAACCAGTAAAGTTCATGACTTTGATTTTCTTTaGATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: GCHDITSKVHDFDFL*MAVGSSWLRDLEML Trigger: CAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGTCATGAACTTTACTGGTTATATCATGGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR TCA 90 bp | ACACACACACATACCAACACATTTCCTTCTAGAGGGATTTTCTCTTaGCTAAGTACAGACAACCAAGTTTTGTGTCTGGGAGCATGTGTG | + |
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Preference number: 1 (lower is better) Translates to: THTHTNTFPSRGIFS*LSTDNQVLCLGACV Trigger: CACACATGCTCCCAGACACAAAACTTGGTTGTCTGTACTTAGTCAAGAGAAAATCCCTCTAGAAGGAAATGTGTTGGTATGTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 90 bp | GTTCTGGGCCTCTTAAATGTGCCTACACATGGCAGTTCCCCTAACTaGAAAGGAAGTAATCTCACAGTGTATTCCAAGCATAAATTAACA | + |
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Preference number: 1 (lower is better) Translates to: VLGLLNVPTHGSSPN*KGSNLTVYSKHKLT Trigger: TGTTAATTTATGCTTGGAATACACTGTGAGATTACTTCCTTTCCAGTTAGGGGAACTGCCATGTGTAGGCACATTTAAGAGGCCCAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR GCA 90 bp | GAGACAAATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTaGCTCTGCCCTGATCTTCAGAAATATTCTTATGTTGATAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: ETNAVIIHYDLLPGN*LCPDLQKYSYVDRA Trigger: TGCTCTATCAACATAAGAATATTTCTGAAGATCAGGGCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATTTGTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR GCA 90 bp | AATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTGCCTCTaGCCTGATCTTCAGAAATATTCTTATGTTGATAGAGCATACAAA | + |
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Preference number: 1 (lower is better) Translates to: NAVIIHYDLLPGNCL*PDLQKYSYVDRAYK Trigger: TTTGTATGCTCTATCAACATAAGAATATTTCTGAAGATCAGGGCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CCA 90 bp | CACATGGCAGTTCCCCTAACTGGAAAGGAAGTAATCTCACAGTGTATTCCAAGCGCAGTGGGAAGCAGCTaGCTCAGGGACTTGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: HMAVPLTGKEVISQCIPSAVGSS*LRDLEM Trigger: CATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGC...GCTTGGAATACACTGTGAGATTACTTCCTTTCCAGTTAGGGGAACTGCCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGGCTGTGTTTGGGCAATaGTTTGACTATCTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLCMAVGSSWLRDLEMLVAVFGQ*FDYLSF Trigger: AAAGGAGAGATAGTCAAAGCATTGCCCAAACACAGC...CACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGTGCTGTCCTCTTCCTCATCTCTAGCTTATGTCCCCAGAGTCCTACACTTGATTTTCTTTGCATaGCAGTGGGAAGCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ACVLSSSSSLAYVPRVLHLIFFA*QWEAAG Trigger: GCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAA...GTGTAGGACTCTGGGGACATAAGCTAGAGATGAGGAAGAGGACAGCACACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR TCA 90 bp | GCATGTGTGCTGTCCTCTTCCTCATCTCTAGCTTATGTCCCCAGAGTCCTACACCACTTTGCATATGATTaGAGACTCAGTTCTCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: ACVLSSSSSLAYVPRVLHHFAYD*RLSSLC Trigger: ACAAAGAGAACTGAGTCTTCAATCATATGCAAAGTG...GTGTAGGACTCTGGGGACATAAGCTAGAGATGAGGAAGAGGACAGCACACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR GCA 90 bp | CACATGGCAGTTCCCCTAACTGGAAAGGAAGTAATCTCACAGTGTATTCCAAGCGACTTTGATTTTCTTTaGATGGCAGTGGGAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HMAVPLTGKEVISQCIPSDFDFL*MAVGSS Trigger: GCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGTC...GCTTGGAATACACTGTGAGATTACTTCCTTTCCAGTTAGGGGAACTGCCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CAA 90 bp | TGGAAAACCCCTCTGCTGTTCGGAGGTCACAAAGACACATTGCCATaGTTAAATGACAGACACCGGATACTTAGAGCATCTTTCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: WKTPLLFGGHKDTLP*LNDRHRILRASFRF Trigger: GAATCTGAAAGATGCTCTAAGTATCCGGTGTCTGTCATTTAACAATGGCAATGTGTCTTTGTGACCTCCGAACAGCAGAGGGGTTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CAA 90 bp | TACCATATCTCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTaGGGAAGTCAGTCATTTGCCCTCTCCACTTCACAGCCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: YHISLLFEAEFSITC*GSQSFALSTSQPHR Trigger: TCTGTGTGGCTGTGAAGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTGAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCCTTGGAAAACCCCTCTaGTGTTCGGAGGTCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: ASELPRQIWISLFPLDDSLGKPL*CSEVTK Trigger: CTTTGTGACCTCCGAACAGCAGAGGGGTTTTCCAAG...GCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTCACTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CAA 90 bp | TCTTTGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTCAGTCATTaGCCCTCTCCACTTCACAGCCACACAGAACTTCTGTTTTATGTA | + |
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Preference number: 2 (lower is better) Translates to: SLRLSFLLLVWEVSH*PSPLHSHTELLFYV Trigger: TACATAAAACAGAAGTTCTGTGTGGCTGTGAAGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CCA 90 bp | GAGACAAATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTGCCTCTGCTTACCGAGGCAAATATaGATTTCTCTTTTTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: ETNAVIIHYDLLPGNCLCLPRQI*ISLFPL Trigger: CAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAA...GCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATTTGTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CAA 90 bp | CGTGTTAGAGGCAAGTATTTTGGACAGATAGTTAATAAAACCCACTaGAATGTTGGGAAAGACAAGTTTGTAGGACAAATCTCATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RVRGKYFGQIVNKTH*NVGKDKFVGQISFP Trigger: TGGGAATGAGATTTGTCCTACAAACTTGTCTTTCCCAACATTCAAGTGGGTTTTATTAACTATCTGTCCAAAATACTTGCCTCTAACACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CAA 90 bp | TACCAGGCAATTGCCTCTGCCCTGATCTTCAGAAATATTCTTATGTaGATAGAGCATACAAAGAAAAACGTGTTAGAGGCAAGTATTTTG | + |
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Preference number: 2 (lower is better) Translates to: YQAIASALIFRNILM*IEHTKKNVLEASIL Trigger: CAAAATACTTGCCTCTAACACGTTTTTCTTTGTATGCTCTATCAACATAAGAATATTTCTGAAGATCAGGGCAGAGGCAATTGCCTGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTTTCACACTTTGCATATaGTTGAAGACTCAGTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ELPRQIWISLFPLDDSFSFTLCI*LKTQFS Trigger: AGAGAACTGAGTCTTCAATCATATGCAAAGTGTGAA...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | GGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTaGCCTCATGGTGGCCTCATGACAGCCTTTAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GPGMVRRMRDLG*PHGGLMTAFSL Trigger: CAAGCTAAAGGCTGTCATGAGGCCACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | GACTTTGATTTTCTTTGCATGGCAGTGGGAAGCAGCTaGCTCAGGGACTTGGAGATGCTGGTGTCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: DFDFLCMAVGSS*LRDLEMLVSGL Trigger: CAAGCCAGACACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CAA 90 bp | GCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGTCTGGCTATATCTCCCTACTCTTaGAGGCTGAGTTTTCTATTA | + |
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Preference number: 3 (lower is better) Translates to: AWQWEAAGSGTWRCWCLAISPYS*RLSFLL Trigger: TAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATAT...AGCCAGACACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CAA 90 bp | GAGACAAATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTGCCTCTGCAGCTGGCTCAGGGACTaGGAGATGCTGGTGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: ETNAVIIHYDLLPGNCLCSWLRD*EMLVSG Trigger: GCCAGACACCAGCATCTCCAAGTCCCTGAGCCAGCT...GCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATTTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGGGTCACAAAGACACATaGCCATTGTTAAATGACAGA | + |
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Preference number: 3 (lower is better) Translates to: FLCMAVGSSWLRDLEMLVGHKDT*PLLNDR Trigger: TCTGTCATTTAACAATGGCAATGTGTCTTTGTGACC...CACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | GTAAAGTTCATGACTTTGATTTTCTTTGCATGGCAGTaGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VKFMTLIFFAWQ*EAAGSGTWRCW Trigger: CCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGTCATGAACTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | GAAACATGCACACAATGCTTCGTAGACATCACTGAGTaGCTTTTGGGGCAATCCTGTTGTGACCATCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: ETCTQCFVDITE*LLGQSCCDHLP Trigger: AGGCAGATGGTCACAACAGGATTGCCCCAAAAGCCACTCAGTGATGTCTACGAAGCATTGTGTGCATGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | CCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTTaGGAAGTCAGTCATTTGCCCTCTCCACTTCACAGC | + |
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Preference number: 3 (lower is better) Translates to: PYSLRLSFLLLV*EVSHLPSPLHS Trigger: GCTGTGAAGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTCAGTCATTTGCCCTCTCCACTAAAGACACATTGCCATaGTTAAATGACAGACACCGG | + |
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Preference number: 3 (lower is better) Translates to: EAEFSITCLGSQSFALSTKDTLP*LNDRHR Trigger: CCGGTGTCTGTCATTTAACAATGGCAATGTGTCTTT...AGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CAA 90 bp | CACATGGCAGTTCCCCTAACTGGAAAGGAAGTAATCTCACAGTGTATTCCAAGCAAATACATGCTGTGTTaGGGCAATGCTTTGACTATC | + |
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Preference number: 3 (lower is better) Translates to: HMAVPLTGKEVISQCIPSKYMLC*GNALTI Trigger: GATAGTCAAAGCATTGCCCAAACACAGCATGTATTT...GCTTGGAATACACTGTGAGATTACTTCCTTTCCAGTTAGGGGAACTGCCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | CTCTTAAATGTGCCTACACATGGCAGTTCCCCTAACTaGAAAGGAAGTAATCTCACAGTGTATTCCAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LLNVPTHGSSPN*KGSNLTVYSKH Trigger: ATGCTTGGAATACACTGTGAGATTACTTCCTTTCCAGTTAGGGGAACTGCCATGTGTAGGCACATTTAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAGTGAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTTCTATTACTTGTTaGGGAAGTCAGTCATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ASELPRQIWISLFPLDDSFSITC*GSQSFA Trigger: GGCAAATGACTGACTTCCCAAACAAGTAATAGAAAA...GCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTCACTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR GCA 72 bp | GCTGTGATAATCCACTATGATTTACTACCAGGCAATTaGCTCTGCCCTGATCTTCAGAAATATTCTTATGTT | + |
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Preference number: 3 (lower is better) Translates to: AVIIHYDLLPGN*LCPDLQKYSYV Trigger: AACATAAGAATATTTCTGAAGATCAGGGCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | AGTCCTACACATCTTCTTTTTCTAGCCAGCTACTTATaGGCCTATGTCTTCTCTGATTTATCAGTACATATA | + |
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Preference number: 3 (lower is better) Translates to: SPTHLLFLASYL*AYVFSDLSVHI Trigger: TATATGTACTGATAAATCAGAGAAGACATAGGCCCATAAGTAGCTGGCTAGAAAAAGAAGATGTGTAGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR GCA 72 bp | ATAATCCACTATGATTTACTACCAGGCAATTGCCTCTaGCCTGATCTTCAGAAATATTCTTATGTTGATAGA | + |
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Preference number: 3 (lower is better) Translates to: IIHYDLLPGNCL*PDLQKYSYVDR Trigger: TCTATCAACATAAGAATATTTCTGAAGATCAGGGCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR CCA 72 bp | TATCCAAATCAAGCAAGTGAGTTACCGAGGCAAATATaGATTTCTCTTTTTCCATTGGATGATAGCTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: YPNQASELPRQI*ISLFPLDDSFS Trigger: ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTCACTTGCTTGATTTGGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| 3UTR TCA 72 bp | CTAAGTACTATTAACTTGTTATCCAAATCAAGCAAGTaGGTTACCGAGGCAAATATGGATTTCTCTTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LSTINLLSKSSK*VTEANMDFSFS Trigger: GGAAAAAGAGAAATCCATATTTGCCTCGGTAACTCACTTGCTTGATTTGGATAACAAGTTAATAGTACTTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR TCA 90 bp | GCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGTCTGGCTGAAACCTGGTGGTCTTaGGCTCCAGCTCATCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AWQWEAAGSGTWRCWCLAETWWS*APAHRS Trigger: GCTACGATGAGCTGGAGCTCAAGACCACCAGGTTTC...AGCCAGACACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR GCA 90 bp | TTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGCCGGACTTGGGAAGGTaGCTGGGATGTCACTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FLCMAVGSSWLRDLEMLVPDLGR*LGCHWQ Trigger: TTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGG...CACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR GCA 90 bp | TTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGTCACTGACTCCATCCTaGTCACGGTGTACAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FLCMAVGSSWLRDLEMLVSLTPS*SRCTGC Trigger: GCAGCCTGTACACCGTGAGCAGGATGGAGTCAGTGA...CACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR CCA 90 bp | GCATGTGTGCTGTCCTCTTCCTCATCTCTAGCTTATGTCCCCAGAGTCCTACACTGTGGGAGCAGCCATTaGCACTGGGGTCTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ACVLSSSSSLAYVPRVLHCGSSH*HWGLWA Trigger: TGCCCAGAGACCCCAGTGCCAATGGCTGCTCCCACA...GTGTAGGACTCTGGGGACATAAGCTAGAGATGAGGAAGAGGACAGCACACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTGGCCTCATGGTATTCGCCAGGAGGGCTaGACGAACTGGTTCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RKGPGMVRRMRDLGWPHGIRQEG*TNWFVR Trigger: CCTGACGAACCAGTTCGTGCAGCCCTCCTGGCGAAT...ACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCCTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR CCA 90 bp | GCATGTGTGCTGTCCTCTTCCTCATCTCTAGCTTATGTCCCCAGAGTCCTACACACTTGGGAAGGTGCCTaGGATGTCACTGGCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ACVLSSSSSLAYVPRVLHTWEGA*DVTGKP Trigger: GGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGT...GTGTAGGACTCTGGGGACATAAGCTAGAGATGAGGAAGAGGACAGCACACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR CCA 90 bp | GCATGTGTGCTGTCCTCTTCCTCATCTCTAGCTTATGTCCCCAGAGTCCTACACGGAAGCGGCAGTAGTTaGCGCCAAAGTACCACTCGC | + |
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Preference number: 4 (lower is better) Translates to: ACVLSSSSSLAYVPRVLHGSGSS*RQSTTR Trigger: GCGAGTGGTACTTTGGCGCCAACTACTGCCGCTTCC...GTGTAGGACTCTGGGGACATAAGCTAGAGATGAGGAAGAGGACAGCACACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR CCA 90 bp | ACTTTGATTTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGACCGGGTCCCCTTCACTaGGGTCATACAGCACGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLIFFAWQWEAAGSGTWRPGPLH*GHTARS Trigger: TGACCGTGCTGTATGACCCCAGTGAAGGGGACCCGG...TCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR TCA 90 bp | GCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGTCTGGCTGGGTACGGCCTGGCATaGCTTTTATTTTGGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: AWQWEAAGSGTWRCWCLAGYGLA*LLFWNK Trigger: TTTATTCCAAAATAAAAGTCATGCCAGGCCGTACCC...AGCCAGACACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTGGCCTCATGGTCCAGGAAATAGTTGGTaGCGGTCCTCATGCGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RKGPGMVRRMRDLGWPHGPGNSW*RSSCAC Trigger: ACAAGCGCATGAGGACCGTCACCAACTATTTCCTGG...ACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR GCA 90 bp | GAGACAAATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTGCCTCTGCGCGCGGAGGAGAAGTTaGCAGCCTGGAGCGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ETNAVIIHYDLLPGNCLCARRRS*QPGAQA Trigger: GGCTTGCGCTCCAGGCTGGCAACTTCTCCTCCGCGC...GCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATTTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS-3UTR TCA 90 bp | GCATGTGTGCTGTCCTCTTCCTCATCTCTAGCTTATGTCCCCAGAGTCCTACACAGCTGGAGACTTGGATaGAAGGACACCAGCGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ACVLSSSSSLAYVPRVLHSWRLG*KDTSEM Trigger: CATTTCGCTGGTGTCCTTTCATCCAAGTCTCCAGCT...GTGTAGGACTCTGGGGACATAAGCTAGAGATGAGGAAGAGGACAGCACACATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTGGCCTCATGGTTGGTACGTGAAATGTTaGTTGGGACCTTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKGPGMVRRMRDLGWPHGWYVKC*LGPSGH Trigger: GTGGCCAGAAGGTCCCAAGCAACATTTCACGTACCA...ACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGATGCTGGTGACCCATGATGAGCAATaGGAAACAGTACACCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLCMAVGSSWLRDLEMLVTHDEQ*ETVHQD Trigger: ATCCTGGTGTACTGTTTCCCATTGCTCATCATGGGT...CACCAGCATCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR TCA 90 bp | CACATGGCAGTTCCCCTAACTGGAAAGGAAGTAATCTCACAGTGTATTCCAAGCTGGTGGAGGCAGATTTaGACTCTCTGTGGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMAVPLTGKEVISQCIPSWWRQI*TLCGSS Trigger: GCTGCTCCCACAGAGAGTTCAAATCTGCCTCCACCA...GCTTGGAATACACTGTGAGATTACTTCCTTTCCAGTTAGGGGAACTGCCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTGGCCTCATGGTTATAGGGCGAGCTTATaGAACTTGATGTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGPGMVRRMRDLGWPHGYRASL*NLMWWR Trigger: CCTCCACCACATCAAGTTTCATAAGCTCGCCCTATA...ACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCCTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | TACCATATCTCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTGAGGGCTGCACGAACTaGTTCGTCAGGTTGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YHISLLFEAEFSITCLGSEGCTN*FVRLAR Trigger: CCGGGCCAACCTGACGAACCAGTTCGTGCAGCCCTC...ACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | GAGACAAATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTGCCTCTGCGGCTGCTCTGCCGTGTaGGATGAAACCTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETNAVIIHYDLLPGNCLCGCSAV*DETWWS Trigger: AGACCACCAGGTTTCATCCCACACGGCAGAGCAGCC...GCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATTTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTAGCAGCCATTGGCACTaGGGTCTCTGGGCACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELPRQIWISLFPLDDSFSSSHWH*GLWAPP Trigger: GGGCGGTGCCCAGAGACCCCAGTGCCAATGGCTGCT...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | TGCACACAATGCTTCGTAGACATCACTGAGTGGCTTTaGGGGCAATCCTGTTGTGACCATCTGCCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTQCFVDITEWL*GQSCCDHLPFW Trigger: CCAAAAAGGCAGATGGTCACAACAGGATTGCCCCAAAAGCCACTCAGTGATGTCTACGAAGCATTGTGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTTGGCACTGGGGTCTCTaGGCACCGCCCTCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELPRQIWISLFPLDDSFSWHWGL*APPSSC Trigger: GCAAGAAGAGGGCGGTGCCCAGAGACCCCAGTGCCA...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTCAGTCATTTGCCCTCTCCACTTTGCTTGGGACCTTCTaGCCACTGCACATAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EAEFSITCLGSQSFALSTLLGTF*PLHIAK Trigger: CTTTGCTATGTGCAGTGGCCAGAAGGTCCCAAGCAA...AGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | AAAACCCCTCTGCTGTTCGGAGGTCACAAAGACACATaGCCATTGTTAAATGACAGACACCGGATACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTPLLFGGHKDT*PLLNDRHRILR Trigger: TCTAAGTATCCGGTGTCTGTCATTTAACAATGGCAATGTGTCTTTGTGACCTCCGAACAGCAGAGGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | CTGAGTTTTCTATTACTTGTTTGGGAAGTCAGTCATTaGCCCTCTCCACTTCACAGCCACACAGAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFLLLVWEVSH*PSPLHSHTELL Trigger: CAGAAGTTCTGTGTGGCTGTGAAGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | TCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTaGGGAAGTCAGTCATTTGCCCTCTCCACTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLFEAEFSITC*GSQSFALSTSQ Trigger: CTGTGAAGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR GCA 90 bp | ATGATTGAAGACTCAGTTCTCTTTGTGCTGGCTGATATGTTGGTAGTTTTTGTTAGGACACCAGCGAAATaGTCTCTTGAAGCCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: MIEDSVLFVLADMLVVFVRTPAK*SLEACT Trigger: CGTGCAGGCTTCAAGAGAGCATTTCGCTGGTGTCCT...AACAAAAACTACCAACATATCAGCCAGCACAAAGAGAACTGAGTCTTCAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR TCA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTTGGCAAACACCGCTGTaGTGGGAAAGAAGTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELPRQIWISLFPLDDSFSWQTPL*WERSSG Trigger: TCCAGAACTTCTTTCCCATCACAGCGGTGTTTGCCA...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR GCA 90 bp | GAGACAAATGCTGTGATAATCCACTATGATTTACTACCAGGCAATTGCCTCTGCCATATACCTGTCCACTaGAATGGCTGTCATAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETNAVIIHYDLLPGNCLCHIPVH*NGCHRV Trigger: TACTCTATGACAGCCATTGCAGTGGACAGGTATATG...GCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGCATTTGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | GCAAGTGAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCGCAAAGGGTACGGCCTaGCATGACTTTTATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASELPRQIWISLFPLDDSAKGTA*HDFYFG Trigger: TCCAAAATAAAAGTCATGCCAGGCCGTACCCTTTGC...GCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTCACTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | TACCATATCTCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTGCCTTAAGCTGCTCATaGTACTTGTCACAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHISLLFEAEFSITCLGSALSCS*YLSQVS Trigger: AGACACCTGTGACAAGTACCATGAGCAGCTTAAGGC...ACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR TCA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTAGCGAAATGCTCTCTTaGAGCCTGCACGAAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELPRQIWISLFPLDDSFSSEMLS*SLHEIF Trigger: AAAGATTTCGTGCAGGCTTCAAGAGAGCATTTCGCT...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR TCA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTCGAGCTTATGAAACTTaGTGTGGTGGAGGCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ELPRQIWISLFPLDDSFSRAYET*CGGGRF Trigger: AAATCTGCCTCCACCACATCAAGTTTCATAAGCTCG...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGTGAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTGCTCTCTTGAAGCCTaGACGAAATCTTTTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASELPRQIWISLFPLDDSCSLEA*TKSFVQ Trigger: TTGAACAAAAGATTTCGTGCAGGCTTCAAGAGAGCA...GCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTCACTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTCAGTCATTTGCCCTCTCCACTATGATAACAATGATGTaGTACGTGAAATGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAEFSITCLGSQSFALSTMITMM*YVKCCL Trigger: CAAGCAACATTTCACGTACCACATCATTGTTATCAT...AGTGGAGAGGGCAAATGACTGACTTCCCAAACAAGTAATAGAAAACTCAGCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | TTGAAAAGCCTTCTTCCTACCATATCTCCCTACTCTTaGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSLLPTISPYS*RLSFLLLVWEV Trigger: GACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTAGGAAGAAGGCTTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | ATTGAAGACTCAGTTCTCTTTGTGCTGGCTGATATGTaGGTAGTTTTTGTTATGTTGGTATTCCACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IEDSVLFVLADM*VVFVMLVFHFS Trigger: AGAAAAGTGGAATACCAACATAACAAAAACTACCAACATATCAGCCAGCACAAAGAGAACTGAGTCTTCAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | CTTTGGAAAAATAATCAAGAGAAATACATGCTGTGTTaGGGCAATGCTTTGACTATCTCTCCTTTTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LWKNNQEKYMLC*GNALTISPFLL Trigger: TAGCAGAAAAGGAGAGATAGTCAAAGCATTGCCCAAACACAGCATGTATTTCTCTTGATTATTTTTCCAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| 3UTR CAA 72 bp | ATTTTTCAAACACTATATTCAGATGATGAGATACAATaGCTAAGGGGAAACATGCACACAATGCTTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFQTLYSDDEIQ*LRGNMHTMLRR Trigger: TCTACGAAGCATTGTGTGCATGTTTCCCCTTAGCAATTGTATCTCATCATCTGAATATAGTGTTTGAAAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS CCA 90 bp | CGCCAGGAGGGCTGCACGAACTGGTTCGTCAGGTTGGCCCGGACTTaGGAAGGTGCCTGGGATGTCACTGGCAAGCCCAGCGCGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQEGCTNWFVRLART*EGAWDVTGKPSAEE Trigger: CTCCTCCGCGCTGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCAGCCCTCCTGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS GCA 90 bp | GGGCTGCACGAACTGGTTCGTCAGGTTGGCCCGGACTTGGGAAGGTaGCTGGGATGTCACTGGCAAGCCCAGCGCGGAGGAGAAGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLHELVRQVGPDLGR*LGCHWQAQRGGEVA Trigger: GGCAACTTCTCCTCCGCGCTGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS TCA 90 bp | GGACTTGGCCGGGTCCCCTTCACTGGGGTCATACAGCACGGTCACTaGCTCCATCCTGCTCACGGTGTACAGGCTGCTCTGCCGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLGRVPFTGVIQHGH*LHPAHGVQAALPCG Trigger: CCCACACGGCAGAGCAGCCTGTACACCGTGAGCAGGATGGAGTCAGTGACCGTGCTGTATGACCCCAGTGAAGGGGACCCGGCCAAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS CCA 90 bp | TGCACGAACTGGTTCGTCAGGTTGGCCCGGACTTGGGAAGGTGCCTaGGATGTCACTGGCAAGCCCAGCGCGGAGGAGAAGTTGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTNWFVRLARTWEGA*DVTGKPSAEEKLPA Trigger: GGCTGGCAACTTCTCCTCCGCGCTGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS CCA 90 bp | AGAGCGCGATTCGCCAGGAGGGCTGCACGAACTGGTTCGTCAGGTTaGCCCGGACTTGGGAAGGTGCCTGGGATGTCACTGGCAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RARFARRAARTGSSG*PGLGKVPGMSLASP Trigger: TGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCAGCCCTCCTGGCGAATCGCGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS GCA 90 bp | GGTCCCCTTCACTGGGGTCATACAGCACGGTCACTGACTCCATCCTaGTCACGGTGTACAGGCTGCTCTGCCGTGTGGGATGAAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPLHWGHTARSLTPS*SRCTGCSAVWDETW Trigger: CCAGGTTTCATCCCACACGGCAGAGCAGCCTGTACACCGTGAGCAGGATGGAGTCAGTGACCGTGCTGTATGACCCCAGTGAAGGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | ACTTTGATTTTCTTTGCATGGCAGTGGGAAGCAGCTGGCTCAGGGACTTGGAGAAGCGCGGAGGAGAAGTaGCCAGCCTGGAGCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLIFFAWQWEAAGSGTWRSAEEK*PAWSAS Trigger: GCTTGCGCTCCAGGCTGGCAACTTCTCCTCCGCGCT...TCTCCAAGTCCCTGAGCCAGCTGCTTCCCACTGCCATGCAAAGAAAATCAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTGGCCTCATGGTAGCTGCTCATGGTACTaGTCACAGGTGTCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKGPGMVRRMRDLGWPHGSCSWY*SQVSPG Trigger: CCCAGGAGACACCTGTGACAAGTACCATGAGCAGCT...ACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGGACCTGGCATGGTTAGGAGAATGAGGGACCTAGGTTGGCCTCATGGTGTGGTGGAGGCAGATTaGAACTCTCTGTGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RKGPGMVRRMRDLGWPHGVVEAD*NSLWEQ Trigger: CTGCTCCCACAGAGAGTTCAAATCTGCCTCCACCAC...ACCATGAGGCCAACCTAGGTCCCTCATTCTCCTAACCATGCCAGGTCCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | TACCATATCTCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTCTGTGGGAGCAGCCATaGGCACTGGGGTCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YHISLLFEAEFSITCLGSLWEQP*ALGSLG Trigger: GCCCAGAGACCCCAGTGCCAATGGCTGCTCCCACAG...ACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS TCA 90 bp | TGGGACCTTCTGGCCACTGCACATAGCAAAGGGTACGGCCTGGCATaGCTTTTATTTTGGAATAAAGACATTGAGGGAAGGCAAGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WDLLATAHSKGYGLA*LLFWNKDIEGRQVE Trigger: TTCTACTTGCCTTCCCTCAATGTCTTTATTCCAAAATAAAAGTCATGCCAGGCCGTACCCTTTGCTATGTGCAGTGGCCAGAAGGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS GCA 90 bp | CAGCTCATCGTAGCTGGAGACTTGGATGAAAGGACACCAGCGAAATaGTCTCTTGAAGCCTGCACGAAATCTTTTGTTCAAACAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLIVAGDLDERTPAK*SLEACTKSFVQTAV Trigger: TACTGCTGTTTGAACAAAAGATTTCGTGCAGGCTTCAAGAGAGCATTTCGCTGGTGTCCTTTCATCCAAGTCTCCAGCTACGATGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS CCA 90 bp | GATGATAACAATGATGTGGTACGTGAAATGTTGCTTGGGACCTTCTaGCCACTGCACATAGCAAAGGGTACGGCCTGGCATGACTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: DDNNDVVREMLLGTF*PLHIAKGTAWHDFY Trigger: ATAAAAGTCATGCCAGGCCGTACCCTTTGCTATGTGCAGTGGCCAGAAGGTCCCAAGCAACATTTCACGTACCACATCATTGTTATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS TCA 90 bp | TTAGGAATATTCATCCACAGAGGTATAGGGCGAGCTTATGAAACTTaGTGTGGTGGAGGCAGATTTGAACTCTCTGTGGGAGCAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGIFIHRGIGRAYET*CGGGRFELSVGAAI Trigger: AATGGCTGCTCCCACAGAGAGTTCAAATCTGCCTCCACCACATCAAGTTTCATAAGCTCGCCCTATACCTCTGTGGATGAATATTCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | TACCATATCTCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTAAATTGACCAAGGTGTaGAAGGCAGCCACGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YHISLLFEAEFSITCLGSKLTKV*KAATEA Trigger: CGCCTCCGTGGCTGCCTTCAACACCTTGGTCAATTT...ACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS CCA 90 bp | GAGAGTAATTCCAACGATGGTGTAGGTGACACCCATGATGAGCAATaGGAAACAGTACACCAGGATGATAACAATGATGTGGTACGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ESNSNDGVGDTHDEQ*ETVHQDDNNDVVRE Trigger: TTCACGTACCACATCATTGTTATCATCCTGGTGTACTGTTTCCCATTGCTCATCATGGGTGTCACCTACACCATCGTTGGAATTACTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | TACCATATCTCCCTACTCTTTGAGGCTGAGTTTTCTATTACTTGTTTGGGAAGTATCGTAGCTGGAGACTaGGATGAAAGGACACCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YHISLLFEAEFSITCLGSIVAGD*DERTPA Trigger: CGCTGGTGTCCTTTCATCCAAGTCTCCAGCTACGAT...ACTTCCCAAACAAGTAATAGAAAACTCAGCCTCAAAGAGTAGGGAGATATGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | ATGATTGAAGACTCAGTTCTCTTTGTGCTGGCTGATATGTTGGTAGTTTTTGTTTACGTGAAATGTTGCTaGGGACCTTCTGGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: MIEDSVLFVLADMLVVFVYVKCC*GPSGHC Trigger: GCAGTGGCCAGAAGGTCCCAAGCAACATTTCACGTA...AACAAAAACTACCAACATATCAGCCAGCACAAAGAGAACTGAGTCTTCAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS-3UTR CAA 90 bp | GAGTTACCGAGGCAAATATGGATTTCTCTTTTTCCATTGGATGATAGCTTTAGTGTGGTACGTGAAATGTaGCTTGGGACCTTCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELPRQIWISLFPLDDSFSVVREM*LGTFWP Trigger: TGGCCAGAAGGTCCCAAGCAACATTTCACGTACCAC...ACTAAAGCTATCATCCAATGGAAAAAGAGAAATCCATATTTGCCTCGGTAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
||
| CDS CAA 72 bp | CCATTGGCACTGGGGTCTCTGGGCACCGCCCTCTTCTaGCGGCTGGACTTGGCCGGGTCCCCTTCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLALGSLGTALF*RLDLAGSPSLG Trigger: CCCCAGTGAAGGGGACCCGGCCAAGTCCAGCCGCAAGAAGAGGGCGGTGCCCAGAGACCCCAGTGCCAATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | GGTCTCTGGGCACCGCCCTCTTCTTGCGGCTGGACTTaGCCGGGTCCCCTTCACTGGGGTCATACAGCACGG | + |
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Preference number: 6 (lower is better) Translates to: GLWAPPSSCGWT*PGPLHWGHTAR Trigger: CCGTGCTGTATGACCCCAGTGAAGGGGACCCGGCCAAGTCCAGCCGCAAGAAGAGGGCGGTGCCCAGAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CAA 72 bp | GGGTCTCTGGGCACCGCCCTCTTCTTGCGGCTGGACTaGGCCGGGTCCCCTTCACTGGGGTCATACAGCACG | + |
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Preference number: 6 (lower is better) Translates to: GSLGTALFLRLD*AGSPSLGSYST Trigger: CGTGCTGTATGACCCCAGTGAAGGGGACCCGGCCAAGTCCAGCCGCAAGAAGAGGGCGGTGCCCAGAGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | GACCAGAGCGCGATTCGCCAGGAGGGCTGCACGAACTaGTTCGTCAGGTTGGCCCGGACTTGGGAAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: DQSAIRQEGCTN*FVRLARTWEGA Trigger: GGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCAGCCCTCCTGGCGAATCGCGCTCTGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | ACTCTCTGTGGGAGCAGCCATTGGCACTGGGGTCTCTaGGCACCGCCCTCTTCTTGCGGCTGGACTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TLCGSSHWHWGL*APPSSCGWTWP Trigger: CGGCCAAGTCCAGCCGCAAGAAGAGGGCGGTGCCCAGAGACCCCAGTGCCAATGGCTGCTCCCACAGAGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS GCA 72 bp | GAACTGGTTCGTCAGGTTGGCCCGGACTTGGGAAGGTaGCTGGGATGTCACTGGCAAGCCCAGCGCGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ELVRQVGPDLGR*LGCHWQAQRGG Trigger: TCCTCCGCGCTGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | TGGTTCGTCAGGTTGGCCCGGACTTGGGAAGGTGCCTaGGATGTCACTGGCAAGCCCAGCGCGGAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: WFVRLARTWEGA*DVTGKPSAEEK Trigger: CTTCTCCTCCGCGCTGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | GGCTGCACGAACTGGTTCGTCAGGTTGGCCCGGACTTaGGAAGGTGCCTGGGATGTCACTGGCAAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GCTNWFVRLART*EGAWDVTGKPS Trigger: GCTGGGCTTGCCAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | TTCGCCAGGAGGGCTGCACGAACTGGTTCGTCAGGTTaGCCCGGACTTGGGAAGGTGCCTGGGATGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: FARRAARTGSSG*PGLGKVPGMSL Trigger: CAGTGACATCCCAGGCACCTTCCCAAGTCCGGGCCAACCTGACGAACCAGTTCGTGCAGCCCTCCTGGCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS TCA 72 bp | CGGGTCCCCTTCACTGGGGTCATACAGCACGGTCACTaGCTCCATCCTGCTCACGGTGTACAGGCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RVPFTGVIQHGH*LHPAHGVQAAL Trigger: CAGAGCAGCCTGTACACCGTGAGCAGGATGGAGTCAGTGACCGTGCTGTATGACCCCAGTGAAGGGGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS GCA 72 bp | CACTGGGGTCATACAGCACGGTCACTGACTCCATCCTaGTCACGGTGTACAGGCTGCTCTGCCGTGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HWGHTARSLTPS*SRCTGCSAVWD Trigger: ATCCCACACGGCAGAGCAGCCTGTACACCGTGAGCAGGATGGAGTCAGTGACCGTGCTGTATGACCCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CAA 90 bp | ATGAAACCTGGTGGTCTTGAGCTCCAGCTCATCGTAGCTGGAGACTaGGATGAAAGGACACCAGCGAAATGCTCTCTTGAAGCCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: MKPGGLELQLIVAGD*DERTPAKCSLEACT Trigger: CGTGCAGGCTTCAAGAGAGCATTTCGCTGGTGTCCTTTCATCCAAGTCTCCAGCTACGATGAGCTGGAGCTCAAGACCACCAGGTTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | AATGATGTGGTACGTGAAATGTTGCTTGGGACCTTCTaGCCACTGCACATAGCAAAGGGTACGGCCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: NDVVREMLLGTF*PLHIAKGTAWH Trigger: ATGCCAGGCCGTACCCTTTGCTATGTGCAGTGGCCAGAAGGTCCCAAGCAACATTTCACGTACCACATCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CAA 72 bp | GGTGGTCTTGAGCTCCAGCTCATCGTAGCTGGAGACTaGGATGAAAGGACACCAGCGAAATGCTCTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GGLELQLIVAGD*DERTPAKCSLE Trigger: TTCAAGAGAGCATTTCGCTGGTGTCCTTTCATCCAAGTCTCCAGCTACGATGAGCTGGAGCTCAAGACCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS TCA 72 bp | TTCATCCACAGAGGTATAGGGCGAGCTTATGAAACTTaGTGTGGTGGAGGCAGATTTGAACTCTCTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FIHRGIGRAYET*CGGGRFELSVG Trigger: TCCCACAGAGAGTTCAAATCTGCCTCCACCACATCAAGTTTCATAAGCTCGCCCTATACCTCTGTGGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS GCA 72 bp | GTAGCTGGAGACTTGGATGAAAGGACACCAGCGAAATaGTCTCTTGAAGCCTGCACGAAATCTTTTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: VAGDLDERTPAK*SLEACTKSFVQ Trigger: TTGAACAAAAGATTTCGTGCAGGCTTCAAGAGAGCATTTCGCTGGTGTCCTTTCATCCAAGTCTCCAGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | TCCAACGATGGTGTAGGTGACACCCATGATGAGCAATaGGAAACAGTACACCAGGATGATAACAATGATGTG | + |
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Preference number: 6 (lower is better) Translates to: SNDGVGDTHDEQ*ETVHQDDNNDV Trigger: CACATCATTGTTATCATCCTGGTGTACTGTTTCCCATTGCTCATCATGGGTGTCACCTACACCATCGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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| CDS CCA 72 bp | ATTTTTACAACCTTTCGTTTAGCCTTAAGCTGCTCATaGTACTTGTCACAGGTGTCTCCTGGGATCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: IFTTFRLALSCS*YLSQVSPGISP Trigger: AGGAGAGATCCCAGGAGACACCTGTGACAAGTACCATGAGCAGCTTAAGGCTAAACGAAAGGTTGTAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029822.6 |
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