Pregenerated sensors for TACR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020081Ensembl transcript IDs: ENSMUST00000020278.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCGGGAGACAACTCACTTTGCAGCTCCTGGATTGGCCAAATGTTaGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTGCTGGAATGCCT | + |
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Preference number: 1 (lower is better) Translates to: SRETTHFAAPGLAKC*FPVFLAPSSVAGMP Trigger: AGGCATTCCAGCAACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 90 bp | CCACCCCTCTCTATACTCCCGGGAGACAACTCACTTTGCAGCTCCTaGATTGGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: PPLSILPGDNSLCSS*IGQMLVPSLPGPFL Trigger: GAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAGTATAGAGAGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR GCA 90 bp | TTCCTGGCCCCTTCCTCGGTTGCTGGAATGCCTATGATGGGTGTCTaGTCTCCAAGCTCTTTGTATCAGCATTGCCTGTGGCGCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: FLAPSSVAGMPMMGV*SPSSLYQHCLWRSE Trigger: CTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGGGGCCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 90 bp | CCTCTCTATACTCCCGGGAGACAACTCACTTTGCAGCTCCTGGATTaGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTG | + |
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Preference number: 1 (lower is better) Translates to: PLYTPGRQLTLQLLD*PNVGSQSSWPLPRL Trigger: CAACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAGTATAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 90 bp | GGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTGCTGGAATGCCTATaGTGGGTGTCTGCTCTCCAAGCTCTTTGTATCAGCATTGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GSQSSWPLPRLLECL*WVSALQALCISIAC Trigger: ACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGGGGCCAGGAAGACTGGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR GCA 90 bp | ATTGGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTaGTGGAATGCCTATGATGGGTGTCTGCTCTCCAAGCTCTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: IGQMLVPSLPGPFLG*WNAYDGCLLSKLFV Trigger: TACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR GCA 90 bp | CACACACATGTGCATACACACACTTGGGGAGGTCAGGGGACAGCTTaGAGACGTTGGTTCTTTCCTTCTGTGTGGGTTTCAGGAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: HTHVHTHTWGGQGTA*RRWFFPSVWVSGTA Trigger: TGCAGTTCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTGTATGCACATGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 90 bp | GTGCATACACACACTTGGGGAGGTCAGGGGACAGCTTGCAGACGTTaGTTCTTTCCTTCTGTGTGGGTTTCAGGAACTGCACTTAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: VHTHTWGGQGTACRR*FFPSVWVSGTALRS Trigger: TGACCTAAGTGCAGTTCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTGTATGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 90 bp | TGGTTCTTTCCTTCTGTGTGGGTTTCAGGAACTGCACTTAGGTCATaGGGCTTAGCAGAGAGTGGCTTTACGACCTCGCTGCTGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: WFFPSVWVSGTALRS*GLAESGFTTSLLSH Trigger: ATGGCTCAGCAGCGAGGTCGTAAAGCCACTCTCTGCTAAGCCTCATGACCTAAGTGCAGTTCCTGAAACCCACACAGAAGGAAAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 90 bp | CCATCCTTCAGCTGCCTTTCTCATTATGACTGCAGTTGTCTTCCCTaGGATCGTTTTTCCACCCCTCTCTATACTCCCGGGAGACAACTC | + |
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Preference number: 1 (lower is better) Translates to: PSFSCLSHYDCSCLP*DRFSTPLYTPGRQL Trigger: GAGTTGTCTCCCGGGAGTATAGAGAGGGGTGGAAAAACGATCTCAGGGAAGACAACTGCAGTCATAATGAGAAAGGCAGCTGAAGGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGCATACATGTGCAGATATACATGCACACACACATGTaGATACACACACTTGGGGAGGTCAGGGGACAGCTTGCAGACGTT | + |
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Preference number: 1 (lower is better) Translates to: VCVCIHVQIYMHTHM*IHTLGEVRGQLADV Trigger: AACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTGTATGCACATGTGTGTGTGCATGTATATCTGCACATGTATGCACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 90 bp | CTCCCGGGAGACAACTCACTTTGCAGCTCCTGGATTGGCCAAATGTaGGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTGCTGGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LPGDNSLCSSWIGQM*VPSLPGPFLGCWNA Trigger: GGCATTCCAGCAACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CCA 90 bp | CACACACTTGGGGAGGTCAGGGGACAGCTTGCAGACGTTGGTTCTTTCCTTCTGGGTTCCCAGTCTTCCTaGCCCCTTCCTCGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HTLGEVRGQLADVGSFLLGSQSS*PLPRLL Trigger: CAGCAACCGAGGAAGGGGCCAGGAAGACTGGGAACC...CAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 90 bp | CCCTCTCTATACTCCCGGGAGACAACTCACTTTGCAGCTCCTGGATaGGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTT | + |
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Preference number: 2 (lower is better) Translates to: PSLYSRETTHFAAPG*AKCWFPVFLAPSSV Trigger: AACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAGTATAGAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 90 bp | TCGGTTGCTGGAATGCCTATGATGGGTGTCTGCTCTCCAAGCTCTTaGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCTTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SVAGMPMMGVCSPSS*YQHCLWRSEHRLAS Trigger: AGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGACAACTCACTTTGCAGCTCCTGGATTGGCCAAATGTTGGTTCCCAGTCTTGGCCCCTTCCTCGGTTaGTGGAATGCCTATGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GDNSLCSSWIGQMLVPSLGPFLG*WNAYDG Trigger: CCCATCATAGGCATTCCAGCAACCGAGGAAGGGGCC...AAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGCTTAGCAGAGAGTGGCTTTACGACCTCGCTGCTGAGCCATGTCACCATCCCTTCCTCGGTTGCTaGAATGCCTATGATGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: MRLSREWLYDLAAEPCHHPFLGC*NAYDGC Trigger: ACACCCATCATAGGCATTCCAGCAACCGAGGAAGGG...ATGGTGACATGGCTCAGCAGCGAGGTCGTAAAGCCACTCTCTGCTAAGCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CCA 90 bp | GATATACATGCACACACACATGTGCATACACACACTTGGGGAGGTCAGGGGACAGGATTGGCCAAATGTTaGTTCCCAGTCTTCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: DIHAHTHVHTHTWGGQGTGLAKC*FPVFLA Trigger: GGCCAGGAAGACTGGGAACCAACATTTGGCCAATCC...TGTCCCCTGACCTCCCCAAGTGTGTGTATGCACATGTGTGTGTGCATGTATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 90 bp | CAAGCTCTTTGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCTaGCTTCTTTTCTGTTGGTGTGTTGAAGAATGGGGTGTGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: QALCISIACGALSTV*LLFCWCVEEWGVGQ Trigger: TTGTCCCACACCCCATTCTTCAACACACCAACAGAAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR TCA 90 bp | CTCGCTGCTGAGCCATGTCACCATCCTTCAGCTGCCTTTCTCATTATGACTGCATTTCTGTTGGTGTGTTaGAGAATGGGGTGTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LAAEPCHHPSAAFLIMTAFLLVC*RMGCGT Trigger: TGTCCCACACCCCATTCTTCAACACACCAACAGAAA...TGCAGTCATAATGAGAAAGGCAGCTGAAGGATGGTGACATGGCTCAGCAGCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCAGACGTTGGTTCTTTCCTTCTGTGTGGGTTTCAGGAACTGCACTTAGGTTGCAGCTCCTGGATTaGCCAAATGTTGGTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ACRRWFFPSVWVSGTALRLQLLD*PNVGSQ Trigger: CTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAA...CCTAAGTGCAGTTCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGACCCTAACACTGGAGTGGTTGCCTTCTTTCTCTTTAACATTGTATGTGTCACTTTGCAGCTCCTaGATTGGCCAAATGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: PVTLTLEWLPSFSLTLYVSLCSS*IGQMLV Trigger: AACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGA...CACATACAATGTTAAAGAGAAAGAAGGCAACCACTCCAGTGTTAGGGTCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 72 bp | ACTCCCGGGAGACAACTCACTTTGCAGCTCCTGGATTaGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: TPGRQLTLQLLD*PNVGSQSSWPL Trigger: AAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 72 bp | TCTTCCTGGCCCCTTCCTCGGTTGCTGGAATGCCTATaGTGGGTGTCTGCTCTCCAAGCTCTTTGTATCAGC | + |
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Preference number: 3 (lower is better) Translates to: SSWPLPRLLECL*WVSALQALCIS Trigger: GCTGATACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGGGGCCAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 72 bp | ACAACTCACTTTGCAGCTCCTGGATTGGCCAAATGTTaGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: TTHFAAPGLAKC*FPVFLAPSSVA Trigger: AGCAACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 72 bp | CACACTTGGGGAGGTCAGGGGACAGCTTGCAGACGTTaGTTCTTTCCTTCTGTGTGGGTTTCAGGAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: HTWGGQGTACRR*FFPSVWVSGTA Trigger: TGCAGTTCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR GCA 72 bp | CCTTCCTCGGTTGCTGGAATGCCTATGATGGGTGTCTaGTCTCCAAGCTCTTTGTATCAGCATTGCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PSSVAGMPMMGV*SPSSLYQHCLW Trigger: CCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 72 bp | TCTATACTCCCGGGAGACAACTCACTTTGCAGCTCCTaGATTGGCCAAATGTTGGTTCCCAGTCTTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SILPGDNSLCSS*IGQMLVPSLPG Trigger: GCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAGTATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGCAGCTCCTGGATTGGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCTTGCTCTGAGCACCGTCTaGCTTCTTTTCTGTTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: TLQLLDWPNVGSQSSWPLALSTV*LLFCWC Trigger: ACACCAACAGAAAAGAAGCAAGACGGTGCTCAGAGC...AAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR GCA 72 bp | ATGGGTGTCTGCTCTCCAAGCTCTTTGTATCAGCATTaGCTGTGGCGCTCTGAGCACCGTCTTGCTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: MGVCSPSSLYQH*LWRSEHRLASF Trigger: AAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CCA 72 bp | GATATACATGCACACACACATGTGCATACACACACTTaGGGAGGTCAGGGGACAGCTTGCAGACGTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: DIHAHTHVHTHT*GGQGTACRRWF Trigger: GAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTGTATGCACATGTGTGTGTGCATGTATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CAA 90 bp | ATATACATGCACACACACATGTGCATACACACACTTGGGGAGGTCAGGGGACAGTGCTCTCCAAGCTCTTaGTATCAGCATTGCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: IYMHTHMCIHTLGEVRGQCSPSS*YQHCLW Trigger: CCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCA...CTGTCCCCTGACCTCCCCAAGTGTGTGTATGCACATGTGTGTGTGCATGTATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGACCCTAACACTGGAGTGGTTGCCTTCTTTCTCTTTAACATTGTATGTGTGTGCATACACACACTaGGGGAGGTCAGGGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: PVTLTLEWLPSFSLTLYVCAYTH*GRSGDS Trigger: GCTGTCCCCTGACCTCCCCAAGTGTGTGTATGCACA...CACATACAATGTTAAAGAGAAAGAAGGCAACCACTCCAGTGTTAGGGTCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 72 bp | TCCAAGCTCTTTGTATCAGCATTGCCTGTGGCGCTCTaGGCACCGTCTTGCTTCTTTTCTGTTGGTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: SKLFVSALPVAL*APSCFFSVGVL Trigger: CAACACACCAACAGAAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 72 bp | AGCTGCCTTTCTCATTATGACTGCAGTTGTCTTCCCTaGGATCGTTTTTCCACCCCTCTCTATACTCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: SCLSHYDCSCLP*DRFSTPLYTPG Trigger: CCCGGGAGTATAGAGAGGGGTGGAAAAACGATCTCAGGGAAGACAACTGCAGTCATAATGAGAAAGGCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTGCAGACGTTGGTTCTTTCCTTCTGTGTGGGTTTCAGGAACTGCACTTAGGTTTTCTGTTGGTGTGTaGAAGAATGGGGTGTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: ACRRWFFPSVWVSGTALRFSVGV*KNGVWD Trigger: GTCCCACACCCCATTCTTCAACACACCAACAGAAAA...CCTAAGTGCAGTTCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR TCA 72 bp | TCTGAGCACCGTCTTGCTTCTTTTCTGTTGGTGTGTTaGAGAATGGGGTGTGGGACAAGCTATTATGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SEHRLASFLLVC*RMGCGTSYYVR Trigger: CCTTACATAATAGCTTGTCCCACACCCCATTCTTCAACACACCAACAGAAAAGAAGCAAGACGGTGCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CCA 90 bp | CACACACTTGGGGAGGTCAGGGGACAGCTTGCAGACGTTGGTTCTTTCCTTCTGGGGCCAGGTAGGCTGTaGCCCATAGCGCCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: HTLGEVRGQLADVGSFLLGPGRL*PIAPAA Trigger: GGCAGCTGGCGCTATGGGCCACAGCCTACCTGGCCC...CAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CCA 90 bp | TCTGCTCTCCAAGCTCTTTGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCGGGGGCGGAGAGCCGTaGCTGGAAAGGGTGGACAAT | + |
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Preference number: 4 (lower is better) Translates to: SALQALCISIACGALSTVGGGEP*LERVDN Trigger: ATTGTCCACCCTTTCCAGCCACGGCTCTCCGCCCCC...GACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR TCA 90 bp | ATGAGGCTTAGCAGAGAGTGGCTTTACGACCTCGCTGCTGAGCCATGTCACCATGGAAGGTCCCCAGGATaGAGTAGAGGTGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: MRLSREWLYDLAAEPCHHGRSPG*SRGGRA Trigger: TGCCCTACCACCTCTACTTCATCCTGGGGACCTTCC...ATGGTGACATGGCTCAGCAGCGAGGTCGTAAAGCCACTCTCTGCTAAGCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CCA 90 bp | GGTCAGGGGACAGCTTGCAGACGTTGGTTCTTTCCTTCTGTGTGGGTTTCAGGATGCCTCCGTTGTCATTaGGCCAGGCCACCACACACT | + |
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Preference number: 4 (lower is better) Translates to: GQGTACRRWFFPSVWVSGCLRCH*ARPPHT Trigger: AGTGTGTGGTGGCCTGGCCCAATGACAACGGAGGCA...TCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 72 bp | GACAACTCACTTTGCAGCTCCTGGATTGGCCAAATGTaGGTTCCCAGTCTTCCTGGCCCCTTCCTCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: DNSLCSSWIGQM*VPSLPGPFLGC Trigger: GCAACCGAGGAAGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 72 bp | TACTCCCGGGAGACAACTCACTTTGCAGCTCCTGGATaGGCCAAATGTTGGTTCCCAGTCTTCCTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: YSRETTHFAAPG*AKCWFPVFLAP Trigger: AGGGGCCAGGAAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCCCGGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 72 bp | TTCCAGAGCAAAGCAGCTGAGTTTCCCTTTGGGTGCTaGTCCTCTGCAGGCTGCCACAGTCCCCACCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: FQSKAAEFPFGC*SSAGCHSPHLF Trigger: GAAAAGGTGGGGACTGTGGCAGCCTGCAGAGGACAAGCACCCAAAGGGAAACTCAGCTGCTTTGCTCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR GCA 90 bp | CATCAGCCGATTCTCAAAGGGGCTAAGCCTGGGCCCTGCAGACAAGCTCAAGACGGAAGTAGCAGAAGGTaGTGCCGAAGTACCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: HQPILKGAKPGPCRQAQDGSSRR*CRSTRC Trigger: ACATCTGGTACTTCGGCAGCACCTTCTGCTACTTCC...GTCTTGAGCTTGTCTGCAGGGCCCAGGCTTAGCCCCTTTGAGAATCGGCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 72 bp | GGAATGCCTATGATGGGTGTCTGCTCTCCAAGCTCTTaGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGT | + |
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Preference number: 4 (lower is better) Translates to: GMPMMGVCSPSS*YQHCLWRSEHR Trigger: ACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR TCA 90 bp | CTTTGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCTTGCTTCTTTTCTGTTGGTGTGACACCGGTTaGCTCTCCTGGAGATGGACG | + |
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Preference number: 4 (lower is better) Translates to: LCISIACGALSTVLLLFCWCDTG*LSWRWT Trigger: CGTCCATCTCCAGGAGAGTCAACCGGTGTCACACCA...ACAGAAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR GCA 90 bp | CTCGCTGCTGAGCCATGTCACCATCCTTCAGCTGCCTTTCTCATTATGACTGCACGCCATGCAGAGGTCTaGCAAGGCCAGGTTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: LAAEPCHHPSAAFLIMTARHAEV*QGQVDD Trigger: ATCATCAACCTGGCCTTGGCAGACCTCTGCATGGCG...TGCAGTCATAATGAGAAAGGCAGCTGAAGGATGGTGACATGGCTCAGCAGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CCA 90 bp | CTTTGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCTTGCTTCTTTTCTGTGGAGTAGAAACATTGTaGGGAGGCGAGAGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LCISIACGALSTVLLLFCGVETL*GGESQG Trigger: GCCCTGGCTCTCGCCTCCCCACAATGTTTCTACTCC...ACAGAAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR TCA 90 bp | ATATACATGCACACACACATGTGCATACACACACTTGGGGAGGTCAGGGGACAGAAAGTCTCCTTGGTGTaGCACCGGTTGACTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IYMHTHMCIHTLGEVRGQKVSLV*HRLTLL Trigger: CAGGAGAGTCAACCGGTGTCACACCAAGGAGACTTT...CTGTCCCCTGACCTCCCCAAGTGTGTGTATGCACATGTGTGTGTGCATGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CCA 90 bp | ATGAGGCTTAGCAGAGAGTGGCTTTACGACCTCGCTGCTGAGCCATGTCACCATTCACAAACTTCTTCTTaGCCTGTAGATGGCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: MRLSREWLYDLAAEPCHHSQTSS*PVDGAG Trigger: ACCTGCGCCATCTACAGGCCAAGAAGAAGTTTGTGA...ATGGTGACATGGCTCAGCAGCGAGGTCGTAAAGCCACTCTCTGCTAAGCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| 3UTR CAA 72 bp | TGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCTaGCTTCTTTTCTGTTGGTGTGTTGAAGAATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CISIACGALSTV*LLFCWCVEEWG Trigger: ACCCCATTCTTCAACACACCAACAGAAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR GCA 90 bp | GGAGACAACTCACTTTGCAGCTCCTGGATTGGCCAAATGTTGGTTCCCAGTCTTAGTAGCAGAAGGTGCTaGCGAAGTACCAGATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GDNSLCSSWIGQMLVPSLSSRRC*RSTRCC Trigger: ACAACATCTGGTACTTCGGCAGCACCTTCTGCTACT...AAGACTGGGAACCAACATTTGGCCAATCCAGGAGCTGCAAAGTGAGTTGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CCA 90 bp | CCTGTGACCCTAACACTGGAGTGGTTGCCTTCTTTCTCTTTAACATTGTATGTGGTGCGCATTCTCTCATaGGCCAGAATGATCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: PVTLTLEWLPSFSLTLYVVRILS*ARMIQM Trigger: CATCTGGATCATTCTGGCCCATGAGAGAATGCGCAC...CACATACAATGTTAAAGAGAAAGAAGGCAACCACTCCAGTGTTAGGGTCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS CCA 90 bp | GGAGATGGACGGAGTGTGGGTCAGCTCCAGCCTGTCTTCCTCGGTTaGTGTCCCCCAGGGGCAGCACCGGAAAGCAAGCCGGAATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GDGRSVGQLQPVFLG*CPPGAAPESKPESR Trigger: TCTGGATTCCGGCTTGCTTTCCGGTGCTGCCCCTGGGGGACACCAACCGAGGAAGACAGGCTGGAGCTGACCCACACTCCGTCCATCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | ATGAGGCTTAGCAGAGAGTGGCTTTACGACCTCGCTGCTGAGCCATGTCACCATGCCTGTCTTCCTCGGTaGGTGTCCCCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: MRLSREWLYDLAAEPCHHACLPR*VSPRGS Trigger: GCTGCCCCTGGGGGACACCAACCGAGGAAGACAGGC...ATGGTGACATGGCTCAGCAGCGAGGTCGTAAAGCCACTCTCTGCTAAGCCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | CACACACTTGGGGAGGTCAGGGGACAGCTTGCAGACGTTGGTTCTTTCCTTCTGACAGCAATAACCGCCTaGGTGCTGGGGGCGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: HTLGEVRGQLADVGSFLLTAITA*VLGAES Trigger: GCTCTCCGCCCCCAGCACCAAGGCGGTTATTGCTGT...CAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCCCAAGTGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | CCCTTCCTCGGTTGCTGGAATGCCTATGATGGGTGTCTGCTCTCCAAGCTCTTTCAGGCCACCACACACTaGGTGGCCCCCTGGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: PFLGCWNAYDGCLLSKLFQATTH*VAPWST Trigger: TGTGGACCAGGGGGCCACCAAGTGTGTGGTGGCCTG...AAAGAGCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS CCA 90 bp | CTTGGTGGCCCCCTGGTCCACAGTGATGGTGGAGTAGAAACATTGTaGGGAGGCGAGAGCCAGGGCTACCAGCCAGATGACAGCAATAAC | + |
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Preference number: 5 (lower is better) Translates to: LGGPLVHSDGGVETL*GGESQGYQPDDSNN Trigger: GTTATTGCTGTCATCTGGCTGGTAGCCCTGGCTCTCGCCTCCCCACAATGTTTCTACTCCACCATCACTGTGGACCAGGGGGCCACCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | ATGGGTGTCTGCTCTCCAAGCTCTTTGTATCAGCATTGCCTGTGGCGCTCTGAGTTGCCTCCGTTGTCATaGGGCCAGGCCACCACACAC | + |
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Preference number: 5 (lower is better) Translates to: MGVCSPSSLYQHCLWRSELPPLS*GQATTH Trigger: GTGTGTGGTGGCCTGGCCCAATGACAACGGAGGCAA...CTCAGAGCGCCACAGGCAATGCTGATACAAAGAGCTTGGAGAGCAGACACCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS TCA 90 bp | TTCACAAACTTCTTCTTGGCCTGTAGATGGCGCAGGTTAGCTCCATaGGCCTGGTGTCTGGGTACGGCGCGTTTCCACAGTGTGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FTNFFLACRWRRLAP*AWCLGTARFHSVRP Trigger: TGGCCTCACACTGTGGAAACGCGCCGTACCCAGACACCAGGCTCATGGAGCTAACCTGCGCCATCTACAGGCCAAGAAGAAGTTTGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | GGTCAGGGGACAGCTTGCAGACGTTGGTTCTTTCCTTCTGTGTGGGTTTCAGGAAGGCCAGACAAGATGTaGGTGTCGGTAACGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: GQGTACRRWFFPSVWVSGRPDKM*VSVTLA Trigger: CGCCAGCGTTACCGACACCAACATCTTGTCTGGCCT...TCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | CTGGCCCCTTCCTCGGTTGCTGGAATGCCTATGATGGGTGTCTGCTCTCCAAGCGTAGTAGATGTCCTCTaGGAAGGTCCCCAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: LAPSSVAGMPMMGVCSPSVVDVL*EGPQDE Trigger: TTCATCCTGGGGACCTTCCAAGAGGACATCTACTAC...GCTTGGAGAGCAGACACCCATCATAGGCATTCCAGCAACCGAGGAAGGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS TCA 90 bp | TCAGAGTGGGTCATATCCCCTGTCATGAACAAAGTCTCCTTGGTGTaGCACCGGTTGACTCTCCTGGAGATGGACGGAGTGTGGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SEWVISPVMNKVSLV*HRLTLLEMDGVWVS Trigger: GCTGACCCACACTCCGTCCATCTCCAGGAGAGTCAACCGGTGTCACACCAAGGAGACTTTGTTCATGACAGGGGATATGACCCACTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | GGTCAGGGGACAGCTTGCAGACGTTGGTTCTTTCCTTCTGTGTGGGTTTCAGGAAAGTTGAAGGTGGCATaGAAGGCCGCCATGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GQGTACRRWFFPSVWVSGKLKVA*KAAMQR Trigger: CCTCTGCATGGCGGCCTTCAATGCCACCTTCAACTT...TCCTGAAACCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS-3UTR CAA 90 bp | CTTTGTATCAGCATTGCCTGTGGCGCTCTGAGCACCGTCTTGCTTCTTTTCTGTAGCATCTTGCCTCCGTaGTCATTGGGCCAGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: LCISIACGALSTVLLLFCSILPP*SLGQAT Trigger: GGTGGCCTGGCCCAATGACAACGGAGGCAAGATGCT...ACAGAAAAGAAGCAAGACGGTGCTCAGAGCGCCACAGGCAATGCTGATACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS CAA 72 bp | GGCCCCCTGGTCCACAGTGATGGTGGAGTAGAAACATaGTGGGGAGGCGAGAGCCAGGGCTACCAGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GPLVHSDGGVET*WGGESQGYQPD Trigger: ATCTGGCTGGTAGCCCTGGCTCTCGCCTCCCCACAATGTTTCTACTCCACCATCACTGTGGACCAGGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS CCA 72 bp | CCCCTGGTCCACAGTGATGGTGGAGTAGAAACATTGTaGGGAGGCGAGAGCCAGGGCTACCAGCCAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: PLVHSDGGVETL*GGESQGYQPDD Trigger: GTCATCTGGCTGGTAGCCCTGGCTCTCGCCTCCCCACAATGTTTCTACTCCACCATCACTGTGGACCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS CCA 72 bp | GATGATACAGTAGGAGCATCTTGCCTCCGTTGTCATTaGGCCAGGCCACCACACACTTGGTGGCCCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: DDTVGASCLRCH*ARPPHTWWPPG Trigger: ACCAGGGGGCCACCAAGTGTGTGGTGGCCTGGCCCAATGACAACGGAGGCAAGATGCTCCTACTGTATCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS TCA 72 bp | TTCTTCTTGGCCTGTAGATGGCGCAGGTTAGCTCCATaGGCCTGGTGTCTGGGTACGGCGCGTTTCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: FFLACRWRRLAP*AWCLGTARFHS Trigger: ACTGTGGAAACGCGCCGTACCCAGACACCAGGCTCATGGAGCTAACCTGCGCCATCTACAGGCCAAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS GCA 72 bp | CTGCCAGCCAGGCATAGAGAAGGCTGTAACGCCTGTTaGGTTACTCTCAAGGCCAGACAAGATGTTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LPARHREGCNAC*VTLKARQDVGV Trigger: GACACCAACATCTTGTCTGGCCTTGAGAGTAACGCAACAGGCGTTACAGCCTTCTCTATGCCTGGCTGGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS GCA 72 bp | GGACAAACACCACCAGATGATACAGTAGGAGCATCTTaGCTCCGTTGTCATTGGGCCAGGCCACCACACACT | + |
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Preference number: 6 (lower is better) Translates to: GQTPPDDTVGAS*LRCHWARPPHT Trigger: AGTGTGTGGTGGCCTGGCCCAATGACAACGGAGGCAAGATGCTCCTACTGTATCATCTGGTGGTGTTTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS TCA 72 bp | GTCATATCCCCTGTCATGAACAAAGTCTCCTTGGTGTaGCACCGGTTGACTCTCCTGGAGATGGACGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VISPVMNKVSLV*HRLTLLEMDGV Trigger: CACTCCGTCCATCTCCAGGAGAGTCAACCGGTGTCACACCAAGGAGACTTTGTTCATGACAGGGGATATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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| CDS CCA 72 bp | GCCAGCAGATGGCAAATGTCACCACCACCAGTACCATaGCCTTCACAAACTTCTTCTTGGCCTGTAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: ASRWQMSPPPVP*PSQTSSWPVDG Trigger: GCCATCTACAGGCCAAGAAGAAGTTTGTGAAGGCCATGGTACTGGTGGTGGTGACATTTGCCATCTGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020278.6 |
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