RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TACR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030043

Ensembl transcript IDs: ENSMUST00000032122.11, ENSMUST00000203775.2

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATaGCTCCAGGATGGCTCCCAGCCTGTCGATACTGGAGGGTACATC +
Preference number: 1 (lower is better)
Translates to: AMALGSHRLEGMQEG*LQDGSQPVDTGGYI
Trigger: GATGTACCCTCCAGTATCGACAGGCTGGGAGCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 90 bp TTTGGAGCAGGGGCAATGGGAAGCTTGCTGGTCCTCTCTGAGGGATaGTTCGGCATATCCATGAAGCCCGGTCCACCTCATCTTCGCTCA +
Preference number: 1 (lower is better)
Translates to: FGAGAMGSLLVLSEG*FGISMKPGPPHLRS
Trigger: TGAGCGAAGATGAGGTGGACCGGGCTTCATGGATATGCCGAAGCATCCCTCAGAGAGGACCAGCAAGCTTCCCATTGCCCCTGCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp GGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCAGGATaGCTCCCAGCCTGTCGATACTGGAGGGTACATCAAGAAAACACA +
Preference number: 1 (lower is better)
Translates to: GIPQVGGNAGRMAPG*LPACRYWRVHQENT
Trigger: TGTGTTTTCTTGATGTACCCTCCAGTATCGACAGGCTGGGAGCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp AGGCTGGCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTaGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTCCACAGCAGG +
Preference number: 1 (lower is better)
Translates to: RLASSGIAGTRISSG*KELCVLSLGKVHSR
Trigger: CCTGCTGTGGACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 90 bp CTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTAGCAAAACATaGAGACAAAGACTCGATTGGTCAGAGCAGGAAGTCCACACACTT +
Preference number: 1 (lower is better)
Translates to: LQRAASLLYTMCSKT*RQRLDWSEQEVHTL
Trigger: AAGTGTGTGGACTTCCTGCTCTGACCAATCGAGTCTTTGTCTTCATGTTTTGCTACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 90 bp AAGCTTTGGCTTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATaGTCCCTTGCTGGGGATCCTGAAGCCGTTTCAGGATGTGACACT +
Preference number: 1 (lower is better)
Translates to: KLWLPATSERQKERA*SLAGDPEAVSGCDT
Trigger: AGTGTCACATCCTGAAACGGCTTCAGGATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAAGCCAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp GCAGGAAGTCCACACACTTGTCCCTCTCAATGCTGTTCTCAGAACTaGGTTGTAGCCTGCTGGAGATATCCGAGATTTCCTGAGAAGTCC +
Preference number: 1 (lower is better)
Translates to: AGSPHTCPSQCCSQN*VVACWRYPRFPEKS
Trigger: GGACTTCTCAGGAAATCTCGGATATCTCCAGCAGGCTACAACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGTGTGTGGACTTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp AATGCAGGAAGGATGGCTCCAGGATGGCTCCCAGCCTGTCGATACTaGAGGGTACATCAAGAAAACACAGGAGATAAACACAGGGTGACA +
Preference number: 1 (lower is better)
Translates to: NAGRMAPGWLPACRY*RVHQENTGDKHRVT
Trigger: TGTCACCCTGTGTTTATCTCCTGTGTTTTCTTGATGTACCCTCCAGTATCGACAGGCTGGGAGCCATCCTGGAGCCATCCTTCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 90 bp CACACTTGTCCCTCTCAATGCTGTTCTCAGAACTGGGTTGTAGCCTaGTGGAGATATCCGAGATTTCCTGAGAAGTCCTCTGCTCTGTCA +
Preference number: 1 (lower is better)
Translates to: HTCPSQCCSQNWVVA*WRYPRFPEKSSALS
Trigger: TGACAGAGCAGAGGACTTCTCAGGAAATCTCGGATATCTCCAGCAGGCTACAACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp ACTTGTCCCTCTCAATGCTGTTCTCAGAACTGGGTTGTAGCCTGCTaGAGATATCCGAGATTTCCTGAGAAGTCCTCTGCTCTGTCAAAG +
Preference number: 1 (lower is better)
Translates to: TCPSQCCSQNWVVAC*RYPRFPEKSSALSK
Trigger: CTTTGACAGAGCAGAGGACTTCTCAGGAAATCTCGGATATCTCCAGCAGGCTACAACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 90 bp TCCACATGCTGGATAGAGCTTTTGTGCATCCAGTTACCCGAACCATaGGGATATTCATGGATGTCACATGAAGCTTTGGCTTCCAGCCAC +
Preference number: 1 (lower is better)
Translates to: STCWIELLCIQLPEP*GYSWMSHEALASSH
Trigger: GTGGCTGGAAGCCAAAGCTTCATGTGACATCCATGAATATCCTCATGGTTCGGGTAACTGGATGCACAAAAGCTCTATCCAGCATGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 90 bp TTCTCAGAACTGGGTTGTAGCCTGCTGGAGATATCCGAGATTTCCTaGGAAGTCCTCTGCTCTGTCAAAGAGGAAAACTTTCCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: FSELGCSLLEISEIS*EVLCSVKEENFPGE
Trigger: TTCTCCAGGAAAGTTTTCCTCTTTGACAGAGCAGAGGACTTCTCAGGAAATCTCGGATATCTCCAGCAGGCTACAACCCAGTTCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp GTCCTTTTGGATTGGTGGATCCTTCAAACTCTTATAGACAGAGGTTaGCAAAGTGGAGCAGGAGGGAAAGGTTCAGAGTCTGAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: VLLDWWILQTLIDRG*QSGAGGKGSESEEK
Trigger: CTTCTCTTCAGACTCTGAACCTTTCCCTCCTGCTCCACTTTGCCAACCTCTGTCTATAAGAGTTTGAAGGATCCACCAATCCAAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp ATATCCATGAAGCCCGGTCCACCTCATCTTCGCTCATACTACACATaGAGTGAAATTTCTCATATCAGTTATAGGTTCCCAGGGCTGACT +
Preference number: 1 (lower is better)
Translates to: ISMKPGPPHLRSYYT*SEISHISYRFPGLT
Trigger: AGTCAGCCCTGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAGATGAGGTGGACCGGGCTTCATGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp CAGTGTTCTCACAAACAGGAATTGACGACATTTTTACAAGTTAAATaGTCTTTGGAGCAGGGGCAATGGGAAGCTTGCTGGTCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: QCSHKQELTTFLQVK*SLEQGQWEACWSSL
Trigger: CAGAGAGGACCAGCAAGCTTCCCATTGCCCCTGCTCCAAAGACCATTTAACTTGTAAAAATGTCGTCAATTCCTGTTTGTGAGAACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 90 bp CACCAGTGTGGAGTATGGTTGGCAAAGACAGGATGGGATCCAGATTaGATACAGCATGGAATGTTTTCCTTAAACCATTGTGACCTTTCC +
Preference number: 1 (lower is better)
Translates to: HQCGVWLAKTGWDPD*IQHGMFSLNHCDLS
Trigger: GGAAAGGTCACAATGGTTTAAGGAAAACATTCCATGCTGTATTCAATCTGGATCCCATCCTGTCTTTGCCAACCATACTCCACACTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 90 bp CCTCTGCTCTGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTaGAGAAGGGCTTTTGGATCAATGGGAGAATATTTACACACACCC +
Preference number: 1 (lower is better)
Translates to: PLLCQRGKLSWRRNL*RRAFGSMGEYLHTP
Trigger: GGGTGTGTGTAAATATTCTCCCATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACAGAGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 90 bp TGTACTGGGGACACAATGCAGAAGAATCCAATATTGTCAATCCCATaGTGTTTAAATGAACTGAGACATCAAGATGTCACAATGCTAAGT +
Preference number: 1 (lower is better)
Translates to: CTGDTMQKNPILSIP*CLNELRHQDVTMLS
Trigger: ACTTAGCATTGTGACATCTTGATGTCTCAGTTCATTTAAACATCATGGGATTGACAATATTGGATTCTTCTGCATTGTGTCCCCAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 90 bp AGGAGGCCTGGCCCAACAAGAGCGATGGCACTGGGATCCCACAGGTaGGAGGGAATGCAGGAAGGATGGCTCCAGGATGGCTCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: RRPGPTRAMALGSHR*EGMQEGWLQDGSQP
Trigger: AGGCTGGGAGCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTTGTTGGGCCAGGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCTGCCTCCATGCCTGGTaGAGCAGGCTGGCATCATCA +
Preference number: 2 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSCLHAW*SRLASS
Trigger: TGATGATGCCAGCCTGCTTCACCAGGCATGGAGGCA...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCATAGGTCTGCTGCCTTaGAGAATCCCTCCCCAGATA +
Preference number: 2 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSIGLLP*RIPPQI
Trigger: TATCTGGGGAGGGATTCTGCAAGGCAGCAGACCTAT...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCCAGAAAGAAAGAGCATaGTCCCTTGCTGGGGATCCT +
Preference number: 2 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSQKERA*SLAGDP
Trigger: AGGATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTG...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 90 bp CTCCAGGCCTGTGTCCTCTCCTTTCCCAGAATTCCACTCAGCCCTTaGTCTCAGCAATCTGCTGAAGGGCTCAGGATGTTCCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: LQACVLSFPRIPLSP*SQQSAEGLRMFLPP
Trigger: TGGTGGGAGGAACATCCTGAGCCCTTCAGCAGATTGCTGAGACAAAGGGCTGAGTGGAATTCTGGGAAAGGAGAGGACACAGGCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCATTCTCTGCAGAGTATaGTTCTCATTTCTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSILCRV*FSFLPL
Trigger: CAGGGGAAGAAATGAGAAGCATACTCTGCAGAGAAT...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCTCAATAAGAGACCCATaGACAGAGCACAAATCACAG +
Preference number: 2 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSSIRDP*TEHKSQ
Trigger: CTGTGATTTGTGCTCTGTGCATGGGTCTCTTATTGA...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCACAGGTTGGAGGGAATaGAGGAAGGATGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLTGWRE*RKDGSR
Trigger: CCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGT...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTAGGTGGCGTCTTCTTTTaGTCACACTGTCCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVGGVFF*SHCPVE
Trigger: TTCCACAGGACAGTGTGAGCAAAAGAAGACGCCACC...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTTGTGGAAGGCTGGAGTaGTGTGAGCTAGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: ASSGIAGTRISSGWKELCCGRLE*CELVCT
Trigger: TGTGCAGACTAGCTCACACCACTCCAGCCTTCCACA...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCATATTCAGTCAGAGTTaGTTGTACTGGGGACACAAT +
Preference number: 2 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSIFSQS*LYWGHN
Trigger: ATTGTGTCCCCAGTACAACCAACTCTGACTGAATAT...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCTGTGTGTCCTCAGTTTaGGCAAAGTCCACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLCVSSV*AKSTAG
Trigger: GCCTGCTGTGGACTTTGCCCAAACTGAGGACACACA...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTAAGTTAAATGGTCTTTaGAGCAGGGGCAATGGGAAG +
Preference number: 2 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAKLNGL*SRGNGK
Trigger: CTTCCCATTGCCCCTGCTCCAAAGACCATTTAACTT...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTGGATGGGATCCAGATTaGATACAGCATGGAATGTTT +
Preference number: 2 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAGWDPD*IQHGMF
Trigger: AAACATTCCATGCTGTATTCAATCTGGATCCCATCC...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTCTTCTCCAGGTATGCTaGTGCCCTCAAAGGGTTAGA +
Preference number: 2 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSLLQVC*CPQRVR
Trigger: TCTAACCCTTTGAGGGCATCAGCATACCTGGAGAAG...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTGGTGGCGTCTTCTTTTaGTCACACTGTCCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSGGVFF*SHCPVE
Trigger: TTCCACAGGACAGTGTGAGCAAAAGAAGACGCCACC...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTGTGGAGTATGGTTaGCAAAGACAGGATGGGATC +
Preference number: 2 (lower is better)
Translates to: SGIAGTRISSGWKELCVLSVEYG*QRQDGI
Trigger: GATCCCATCCTGTCTTTGCCAACCATACTCCACACT...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGAGTGTGGAGTATGGTTaGCAAAGACAGGATGGGATC +
Preference number: 2 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGSVEYG*QRQDGI
Trigger: GATCCCATCCTGTCTTTGCCAACCATACTCCACACT...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCCACCAGTGTGGAGTATaGTTGGCAAAGACAGGATGG +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLHQCGV*LAKTGW
Trigger: CCATCCTGTCTTTGCCAACCATACTCCACACTGGTG...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 90 bp CATGAAGACAAAGACTCGATTGGTCAGAGCAGGAAGTCCACACACTaGTCCCTCTCAATGCTGTTCTCAGAACTGGGTTGTAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: HEDKDSIGQSRKSTH*SLSMLFSELGCSLL
Trigger: CAGCAGGCTACAACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGTGTGTGGACTTCCTGCTCTGACCAATCGAGTCTTTGTCTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTTCGTTTCAGGAATCATaGGATAAACTTCAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMASFQES*DKLQGK
Trigger: TTTCCCCTGAAGTTTATCCCATGATTCCTGAAACGA...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCTGGGTTGTAGCCTGCTaGAGATATCCGAGATTTCCT +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLWVVAC*RYPRFP
Trigger: AGGAAATCTCGGATATCTCCAGCAGGCTACAACCCA...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCTTCCTTAAACCATTGTaGCCTTTCCCCAAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLFLKPL*PFPKSS
Trigger: GGAGCTTTTGGGGAAAGGTCACAATGGTTTAAGGAA...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCACTTGTCCCTCTCAATaGTGTTCTCAGAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLTCPSQ*CSQNWV
Trigger: AACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGT...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTGTCCTTTTGGATTGGTaGATCCTTCAAACTCTTATA +
Preference number: 2 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAVLLDW*ILQTLI
Trigger: TATAAGAGTTTGAAGGATCCACCAATCCAAAAGGAC...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTATCGTTTCAGGAATCATaGGATAAACTTCAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVSFQES*DKLQGK
Trigger: TTTCCCCTGAAGTTTATCCCATGATTCCTGAAACGA...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCGGGCTTTTGGATCAATaGGAGAATATTTACACACAC +
Preference number: 2 (lower is better)
Translates to: SGIAGTRISSGWKELCVLGLLDQ*ENIYTH
Trigger: GTGTGTGTAAATATTCTCCCATTGATCCAAAAGCCC...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCTGGAGAAGGAATTTGTaGAGAAGGGCTTTTGGATCA +
Preference number: 2 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGIWRRNL*RRAFGS
Trigger: TGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCA...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGAGGAAAACTTTCCTaGAGAAGGAATTTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: SGIAGTRISSGWKELCVLRGKLS*RRNLWR
Trigger: TCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCCCCATGATGTTTAAATaGACTGAGACATCAAGATGT +
Preference number: 2 (lower is better)
Translates to: SGIAGTRISSGWKELCVLPMMFK*TETSRC
Trigger: ACATCTTGATGTCTCAGTTCATTTAAACATCATGGG...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTACTGGGGACACAATaGAGAAGAATCCAATATTGT +
Preference number: 2 (lower is better)
Translates to: ASSGIAGTRISSGWKELCVLGTQ*RRIQYC
Trigger: ACAATATTGGATTCTTCTGCATTGTGTCCCCAGTAC...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTGTACTGGGGACACAATaGAGAAGAATCCAATATTGT +
Preference number: 2 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSVLGTQ*RRIQYC
Trigger: ACAATATTGGATTCTTCTGCATTGTGTCCCCAGTAC...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTTTGGTTCAGCTCTGCTaGTTTACAAAGAAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSLVQLC*FTKKEK
Trigger: CTTTTCCTTCTTTGTAAAGCAGCAGAGCTGAACCAA...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATGTGGAAGGCTGGAGTaGTGTGAGCTAGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGCGRLE*CELVCT
Trigger: TGTGCAGACTAGCTCACACCACTCCAGCCTTCCACA...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTATATTCAGTCAGAGTTaGTTGTACTGGGGACACAAT +
Preference number: 2 (lower is better)
Translates to: ASSGIAGTRISSGWKELCIFSQS*LYWGHN
Trigger: ATTGTGTCCCCAGTACAACCAACTCTGACTGAATAT...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGGGCTTTTGGATCAATaGGAGAATATTTACACACAC +
Preference number: 2 (lower is better)
Translates to: ASSGIAGTRISSGWKELCGLLDQ*ENIYTH
Trigger: GTGTGTGTAAATATTCTCCCATTGATCCAAAAGCCC...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCGTGGAGAAGGGCTTTTaGATCAATGGGAGAATATTT +
Preference number: 2 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLVEKGF*INGRIF
Trigger: AAATATTCTCCCATTGATCCAAAAGCCCTTCTCCAC...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCGTGGAGAAGGGCTTTTaGATCAATGGGAGAATATTT +
Preference number: 2 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGIVEKGF*INGRIF
Trigger: AAATATTCTCCCATTGATCCAAAAGCCCTTCTCCAC...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTTATTTGGTTCAGCTCTaGTGCTTTACAAAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: ASSGIAGTRISSGWKELCYLVQL*CFTKKE
Trigger: TTCCTTCTTTGTAAAGCAGCAGAGCTGAACCAAATA...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TATGCTGATGCCCTCAAAGGGTTAGACCCAACAAGGCTGGTAGAAGTTATAAATCACCAGTGTGGAGTATaGTTGGCAAAGACAGGATGG +
Preference number: 2 (lower is better)
Translates to: YADALKGLDPTRLVEVINHQCGV*LAKTGW
Trigger: CCATCCTGTCTTTGCCAACCATACTCCACACTGGTG...ATTTATAACTTCTACCAGCCTTGTTGGGTCTAACCCTTTGAGGGCATCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGCTTGGGTCACCAGTGTaGAGTATGGTTGGCAAAGAC +
Preference number: 2 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMLGSPV*SMVGKD
Trigger: GTCTTTGCCAACCATACTCCACACTGGTGACCCAAG...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGAGCTAGTCTGCACATGTaGCTGAGAATGACTTCGCTG +
Preference number: 2 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGASLHM*LRMTSL
Trigger: CAGCGAAGTCATTCTCAGCCACATGTGCAGACTAGC...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTGTCCTTTTGGATTGGTaGATCCTTCAAACTCTTATA +
Preference number: 2 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSVLLDW*ILQTLI
Trigger: TATAAGAGTTTGAAGGATCCACCAATCCAAAAGGAC...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp CATGTGGCTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGGGATGGGATCCAGATTaGATACAGCATGGAATGTTT +
Preference number: 2 (lower is better)
Translates to: HVAENDFAEERQMFQANRGWDPD*IQHGMF
Trigger: AAACATTCCATGCTGTATTCAATCTGGATCCCATCC...CCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAGCCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCACAGAGGTTGGCAAAGTaGAGCAGGAGGGAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: LRSYYTWSEISHISYRFPQRLAK*SRRERF
Trigger: GAACCTTTCCCTCCTGCTCCACTTTGCCAACCTCTG...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR TCA 90 bp GAGAATATTTACACACACCCATCTCTAGGGACTGACAGCCCTGGTATTTTTGATTTCCTTAAACCATTGTaGCCTTTCCCCAAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: ENIYTHPSLGTDSPGIFDFLKPL*PFPKSS
Trigger: GGAGCTTTTGGGGAAAGGTCACAATGGTTTAAGGAA...ATCAAAAATACCAGGGCTGTCAGTCCCTAGAGATGGGTGTGTGTAAATATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp TATGCTGATGCCCTCAAAGGGTTAGACCCAACAAGGCTGGTAGAAGTTATAAATTCAGTTCTTGGCTCTTaGCAGACTAAGTGTCCTTTT +
Preference number: 2 (lower is better)
Translates to: YADALKGLDPTRLVEVINSVLGS*QTKCPF
Trigger: AAAAGGACACTTAGTCTGCCAAGAGCCAAGAACTGA...ATTTATAACTTCTACCAGCCTTGTTGGGTCTAACCCTTTGAGGGCATCAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR GCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCAATCTTAGGAGGAATCTaGTTCTCAATGCCTCCATGC +
Preference number: 2 (lower is better)
Translates to: LRSYYTWSEISHISYRFPILGGI*FSMPPC
Trigger: GCATGGAGGCATTGAGAAGCAGATTCCTCCTAAGAT...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCACAGAGTTGGTTGTACTaGGGACACAATGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: LRSYYTWSEISHISYRFPQSWLY*GHNAEE
Trigger: TTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTG...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCAAATCCTGCTGATGAGTaGTCTTGTTCTCCTCCACAT +
Preference number: 2 (lower is better)
Translates to: LRSYYTWSEISHISYRFPNPADE*SCSPPH
Trigger: ATGTGGAGGAGAACAAGACCACTCATCAGCAGGATT...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCATCAGTTCTTGGCTCTTaGCAGACTAAGTGTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LRSYYTWSEISHISYRFPSVLGS*QTKCPF
Trigger: AAAAGGACACTTAGTCTGCCAAGAGCCAAGAACTGA...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 90 bp ATTCCTTCTTGGAAGTGTAATATACAACTTGGGCATTGGCTTTTGTaGTTCTTACACTATTTTCAACTCATAGGTTGTCATTCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: IPSWKCNIQLGHWLL*FLHYFQLIGCHSVA
Trigger: GGCCACTGAATGACAACCTATGAGTTGAAAATAGTGTAAGAACAACAAAAGCCAATGCCCAAGTTGTATATTACACTTCCAAGAAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATaGAGGAAGGATGGCTCCAGGATGGCTCCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: ERWHWDPTGWRE*RKDGSRMAPSL
Trigger: CAGGCTGGGAGCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp GCCCAACAAGAGCGATGGCACTGGGATCCCACAGGTTaGAGGGAATGCAGGAAGGATGGCTCCAGGATGGCT +
Preference number: 3 (lower is better)
Translates to: AQQERWHWDPTG*RECRKDGSRMA
Trigger: AGCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTTGTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp CTCCTCTCTAAGCAAGAACAGTGGCAGGAGGAGGCCTaGCCCAACAAGAGCGATGGCACTGGGATCCCACAG +
Preference number: 3 (lower is better)
Translates to: LLSKQEQWQEEA*PNKSDGTGIPQ
Trigger: CTGTGGGATCCCAGTGCCATCGCTCTTGTTGGGCCAGGCCTCCTCCTGCCACTGTTCTTGCTTAGAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCAGGTGGCGTCTTCTTTaGCTCACACTGTCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSRWRLL*LTLSCG
Trigger: TCCACAGGACAGTGTGAGCAAAAGAAGACGCCACCT...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp GGGGCAATGGGAAGCTTGCTGGTCCTCTCTGAGGGATaGTTCGGCATATCCATGAAGCCCGGTCCACCTCAT +
Preference number: 3 (lower is better)
Translates to: GAMGSLLVLSEG*FGISMKPGPPH
Trigger: ATGAGGTGGACCGGGCTTCATGGATATGCCGAAGCATCCCTCAGAGAGGACCAGCAAGCTTCCCATTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp CAGGTTGGAGGGAATGCAGGAAGGATGGCTCCAGGATaGCTCCCAGCCTGTCGATACTGGAGGGTACATCAA +
Preference number: 3 (lower is better)
Translates to: QVGGNAGRMAPG*LPACRYWRVHQ
Trigger: TTGATGTACCCTCCAGTATCGACAGGCTGGGAGCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCTTCAGTCAGAGTTGGTaGTACTGGGGACACAATGCA +
Preference number: 3 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSFSQSW*YWGHNA
Trigger: TGCATTGTGTCCCCAGTACAACCAACTCTGACTGAA...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp GAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTaGAGAGGGCAGCCTCCCTCCTCTACACCATGTGTA +
Preference number: 3 (lower is better)
Translates to: EKRQGSSFQECS*RGQPPSSTPCV
Trigger: TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTAAAGAGCATGCTCCCTaGCTGGGGATCCTGAAGCCG +
Preference number: 3 (lower is better)
Translates to: ASSGIAGTRISSGWKELCKEHAP*LGILKP
Trigger: CGGCTTCAGGATCCCCAGCAAGGGAGCATGCTCTTT...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCAGGATGGGATCCAGATaGAATACAGCATGGAATGTT +
Preference number: 3 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSRMGSR*NTAWNV
Trigger: AACATTCCATGCTGTATTCAATCTGGATCCCATCCT...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTAGTTCACCAATCTGCCTaGGGTCACCAGTGTGGAGTA +
Preference number: 3 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVVHQSA*GHQCGV
Trigger: TACTCCACACTGGTGACCCAAGGCAGATTGGTGAAC...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCAAGTTAAATGGTCTTaGGAGCAGGGGCAATGGGAA +
Preference number: 3 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAQVKWS*EQGQWE
Trigger: TTCCCATTGCCCCTGCTCCAAAGACCATTTAACTTG...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp CTCCCACCAAGGTCCTTCCACAGCCTCCAGTTTCATTaGATATGGGGCAGACTTCAGAGCTCCTCTCTAAGC +
Preference number: 3 (lower is better)
Translates to: LPPRSFHSLQFH*IWGRLQSSSLS
Trigger: GCTTAGAGAGGAGCTCTGAAGTCTGCCCCATATTCAATGAAACTGGAGGCTGTGGAAGGACCTTGGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp CAGAATTCCACTCAGCCCTTTGTCTCAGCAATCTGCTaGAGGGCTCAGGATGTTCCTCCCACCAAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: QNSTQPFVSAIC*RAQDVPPTKVL
Trigger: AAGGACCTTGGTGGGAGGAACATCCTGAGCCCTTCAGCAGATTGCTGAGACAAAGGGCTGAGTGGAATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp GTCAGAGCAGGAAGTCCACACACTTGTCCCTCTCAATaGTGTTCTCAGAACTGGGTTGTAGCCTGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: VRAGSPHTCPSQ*CSQNWVVACWR
Trigger: TCTCCAGCAGGCTACAACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGTGTGTGGACTTCCTGCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp CTTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATaGTCCCTTGCTGGGGATCCTGAAGCCGTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: LPATSERQKERA*SLAGDPEAVSG
Trigger: TCCTGAAACGGCTTCAGGATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCAGGTGGCGTCTTCTTTaGCTCACACTGTCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGIRWRLL*LTLSCG
Trigger: TCCACAGGACAGTGTGAGCAAAAGAAGACGCCACCT...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTAGGAAGTCCACACACTaGTCCCTCTCAATGCTGTTC +
Preference number: 3 (lower is better)
Translates to: ASSGIAGTRISSGWKELCRKSTH*SLSMLF
Trigger: GAACAGCATTGAGAGGGACAAGTGTGTGGACTTCCT...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCAGGAAGTCCACACACTaGTCCCTCTCAATGCTGTTC +
Preference number: 3 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGIRKSTH*SLSMLF
Trigger: GAACAGCATTGAGAGGGACAAGTGTGTGGACTTCCT...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCTCTTATAGACAGAGGTaGGCAAAGTGGAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLSYRQR*AKWSRR
Trigger: CCTCCTGCTCCACTTTGCCAACCTCTGTCTATAAGA...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp GCAGCCTCCCTCCTCTACACCATGTGTAGCAAAACATaGAGACAAAGACTCGATTGGTCAGAGCAGGAAGTC +
Preference number: 3 (lower is better)
Translates to: AASLLYTMCSKT*RQRLDWSEQEV
Trigger: GACTTCCTGCTCTGACCAATCGAGTCTTTGTCTTCATGTTTTGCTACACATGGTGTAGAGGAGGGAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTATGTGGAGAAGGGCTTTaGGATCAATGGGAGAATATT +
Preference number: 3 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVCGEGL*DQWENI
Trigger: AATATTCTCCCATTGATCCAAAAGCCCTTCTCCACA...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCTTGGGCATTGGCTTTaGTTGTTCTTACACTATTTT +
Preference number: 3 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMALGHWL*LFLHYF
Trigger: AAAATAGTGTAAGAACAACAAAAGCCAATGCCCAAG...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp AAAATCTTAGGAGGAATCTGCTTCTCAATGCCTCCATaGCTGGTGAAGCAGGCTGGCATCATCAGGAATAGC +
Preference number: 3 (lower is better)
Translates to: KILGGICFSMPP*LVKQAGIIRNS
Trigger: GCTATTCCTGATGATGCCAGCCTGCTTCACCAGGCATGGAGGCATTGAGAAGCAGATTCCTCCTAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp TTTAGAAGTTCACCAATCTGCCTTGGGTCACCAGTGTaGAGTATGGTTGGCAAAGACAGGATGGGATCCAGA +
Preference number: 3 (lower is better)
Translates to: FRSSPICLGSPV*SMVGKDRMGSR
Trigger: TCTGGATCCCATCCTGTCTTTGCCAACCATACTCCACACTGGTGACCCAAGGCAGATTGGTGAACTTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp GCACCTTGCATGCAGATGAAGTCGTTTCAGGAATCATaGGATAAACTTCAGGGGAAACCGAGGATAGCCTTC +
Preference number: 3 (lower is better)
Translates to: APCMQMKSFQES*DKLQGKPRIAF
Trigger: GAAGGCTATCCTCGGTTTCCCCTGAAGTTTATCCCATGATTCCTGAAACGACTTCATCTGCATGCAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp TCTCAATGCTGTTCTCAGAACTGGGTTGTAGCCTGCTaGAGATATCCGAGATTTCCTGAGAAGTCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: SQCCSQNWVVAC*RYPRFPEKSSA
Trigger: AGCAGAGGACTTCTCAGGAAATCTCGGATATCTCCAGCAGGCTACAACCCAGTTCTGAGAACAGCATTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp TTTTTACAAGTTAAATGGTCTTTGGAGCAGGGGCAATaGGAAGCTTGCTGGTCCTCTCTGAGGGATGCTTCG +
Preference number: 3 (lower is better)
Translates to: FLQVKWSLEQGQ*EACWSSLRDAS
Trigger: CGAAGCATCCCTCAGAGAGGACCAGCAAGCTTCCCATTGCCCCTGCTCCAAAGACCATTTAACTTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTAAAACACTTAGAGTATTaGGTTCAGCTCTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVKHLEY*VQLCCF
Trigger: AAAGCAGCAGAGCTGAACCAAATACTCTAAGTGTTT...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCAAACACTTAGAGTATTaGGTTCAGCTCTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLKHLEY*VQLCCF
Trigger: AAAGCAGCAGAGCTGAACCAAATACTCTAAGTGTTT...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp CAGAATCCCTCCCCAGATAAGCACCTTGCATGCAGATaGAGTCGTTTCAGGAATCATGGGATAAACTTCAGG +
Preference number: 3 (lower is better)
Translates to: QNPSPDKHLACR*SRFRNHGINFR
Trigger: CCTGAAGTTTATCCCATGATTCCTGAAACGACTTCATCTGCATGCAAGGTGCTTATCTGGGGAGGGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp CTGGGTTGTAGCCTGCTGGAGATATCCGAGATTTCCTaGGAAGTCCTCTGCTCTGTCAAAGAGGAAAACTTT +
Preference number: 3 (lower is better)
Translates to: LGCSLLEISEIS*EVLCSVKEENF
Trigger: AAAGTTTTCCTCTTTGACAGAGCAGAGGACTTCTCAGGAAATCTCGGATATCTCCAGCAGGCTACAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp GTGAAATTTCTCATATCAGTTATAGGTTCCCAGGGCTaGCTGGTGGCTCCCTTCATAGTTACCTCAGAGACC +
Preference number: 3 (lower is better)
Translates to: VKFLISVIGSQG*LVAPFIVTSET
Trigger: GGTCTCTGAGGTAACTATGAAGGGAGCCACCAGTCAGCCCTGGGAACCTATAACTGATATGAGAAATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp GATTGGTGGATCCTTCAAACTCTTATAGACAGAGGTTaGCAAAGTGGAGCAGGAGGGAAAGGTTCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: DWWILQTLIDRG*QSGAGGKGSES
Trigger: AGACTCTGAACCTTTCCCTCCTGCTCCACTTTGCCAACCTCTGTCTATAAGAGTTTGAAGGATCCACCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TATGCTGATGCCCTCAAAGGGTTAGACCCAACAAGGCTGGTAGAAGTTATAAATCAGTGTGGAGTATGGTaGGCAAAGACAGGATGGGAT +
Preference number: 3 (lower is better)
Translates to: YADALKGLDPTRLVEVINQCGVW*AKTGWD
Trigger: ATCCCATCCTGTCTTTGCCAACCATACTCCACACTG...ATTTATAACTTCTACCAGCCTTGTTGGGTCTAACCCTTTGAGGGCATCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGACAGTGTGGAGTATGGTaGGCAAAGACAGGATGGGAT +
Preference number: 3 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGQCGVW*AKTGWD
Trigger: ATCCCATCCTGTCTTTGCCAACCATACTCCACACTG...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTGCTTTTCTTTATATTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSAFLYI*CVCVCV
Trigger: CACACACACACACACACACAAAATATAAAGAAAAGC...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCGCTTTTCTTTATATTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGIAFLYI*CVCVCV
Trigger: CACACACACACACACACACAAAATATAAAGAAAAGC...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp TATGCTGATGCCCTCAAAGGGTTAGACCCAACAAGGCTGGTAGAAGTTATAAATTTCAGTCAGAGTTGGTaGTACTGGGGACACAATGCA +
Preference number: 3 (lower is better)
Translates to: YADALKGLDPTRLVEVINFSQSW*YWGHNA
Trigger: TGCATTGTGTCCCCAGTACAACCAACTCTGACTGAA...ATTTATAACTTCTACCAGCCTTGTTGGGTCTAACCCTTTGAGGGCATCAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp TGGATAGAGCTTTTGTGCATCCAGTTACCCGAACCATaGGGATATTCATGGATGTCACATGAAGCTTTGGCT +
Preference number: 3 (lower is better)
Translates to: WIELLCIQLPEP*GYSWMSHEALA
Trigger: AGCCAAAGCTTCATGTGACATCCATGAATATCCTCATGGTTCGGGTAACTGGATGCACAAAAGCTCTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp CATCAGCTGGCTTGTGTAGACATATTCAGTCAGAGTTaGTTGTACTGGGGACACAATGCAGAAGAATCCAAT +
Preference number: 3 (lower is better)
Translates to: HQLACVDIFSQS*LYWGHNAEESN
Trigger: ATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGTCTACACAAGCCAGCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp GGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATaGGAGAATATTTACACACACCCATCTCTAGGGACT +
Preference number: 3 (lower is better)
Translates to: GEGICGEGLLDQ*ENIYTHPSLGT
Trigger: AGTCCCTAGAGATGGGTGTGTGTAAATATTCTCCCATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp TTGGCTCTTGGCAGACTAAGTGTCCTTTTGGATTGGTaGATCCTTCAAACTCTTATAGACAGAGGTTGGCAA +
Preference number: 3 (lower is better)
Translates to: LALGRLSVLLDW*ILQTLIDRGWQ
Trigger: TTGCCAACCTCTGTCTATAAGAGTTTGAAGGATCCACCAATCCAAAAGGACACTTAGTCTGCCAAGAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CCA 72 bp AAGCCCGGTCCACCTCATCTTCGCTCATACTACACATaGAGTGAAATTTCTCATATCAGTTATAGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: KPGPPHLRSYYT*SEISHISYRFP
Trigger: TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAGATGAGGTGGACCGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR-3UTR CAA 90 bp GAGAATATTTACACACACCCATCTCTAGGGACTGACAGCCCTGGTATTTTTGATAGGATGGGATCCAGATaGAATACAGCATGGAATGTT +
Preference number: 3 (lower is better)
Translates to: ENIYTHPSLGTDSPGIFDRMGSR*NTAWNV
Trigger: AACATTCCATGCTGTATTCAATCTGGATCCCATCCT...ATCAAAAATACCAGGGCTGTCAGTCCCTAGAGATGGGTGTGTGTAAATATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATaGAGTATATACATCATTAAACCAGGAAACACAGAC +
Preference number: 3 (lower is better)
Translates to: RERERERERERE*SIYIIKPGNTD
Trigger: GTCTGTGTTTCCTGGTTTAATGATGTATATACTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR GCA 72 bp CATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATaGAGAAGAATCCAATATTGTCAATCCCATGATGTT +
Preference number: 3 (lower is better)
Translates to: HIQSELVVLGTQ*RRIQYCQSHDV
Trigger: AACATCATGGGATTGACAATATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp CAGAGCACAAATCACAGTGTTCTCACAAACAGGAATTaGCGACATTTTTACAAGTTAAATGGTCTTTGGAGC +
Preference number: 3 (lower is better)
Translates to: QSTNHSVLTNRN*RHFYKLNGLWS
Trigger: GCTCCAAAGACCATTTAACTTGTAAAAATGTCGTCAATTCCTGTTTGTGAGAACACTGTGATTTGTGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR TCA 72 bp GACACAATGCAGAAGAATCCAATATTGTCAATCCCATaGTGTTTAAATGAACTGAGACATCAAGATGTCACA +
Preference number: 3 (lower is better)
Translates to: DTMQKNPILSIP*CLNELRHQDVT
Trigger: TGTGACATCTTGATGTCTCAGTTCATTTAAACATCATGGGATTGACAATATTGGATTCTTCTGCATTGTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp GGCCCAACAAGAGCGATGGCACTGGGATCCCACAGGTaGGAGGGAATGCAGGAAGGATGGCTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: GPTRAMALGSHR*EGMQEGWLQDG
Trigger: GCCATCCTGGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTTGTTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCGCATGGTCTCTGTGGTaGAGTAGTAGCCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSAWSLW*SSSPVG
Trigger: TCCCACAGGGCTACTACTCCACCACAGAGACCATGC...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp GAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCCGACCGTATAGGCGGCTaGCCAAAGGACAATTTGCCA +
Preference number: 4 (lower is better)
Translates to: ERWHWDPTGWRECRKDGSDRIGG*PKDNLP
Trigger: TGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTC...GGAGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTCAGCAGCGAAAGGCATaGTTGAAGCCCAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAQQRKA*LKPRRN
Trigger: GTTCCGTCTGGGCTTCAAGCATGCCTTTCGCTGCTG...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTTGGGCATGGTCTCTGTaGTGGAGTAGTAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAWAWSL*WSSSPV
Trigger: CACAGGGCTACTACTCCACCACAGAGACCATGCCCA...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCGGGCTCCCACCACAGTaGAGATGGTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGIGLPPQ*RWWSPG
Trigger: GCCTGGAGACCACCATCTCCACTGTGGTGGGAGCCC...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp CATGTGGCTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGGCCGACAGCCGGGGCTaGAGAGGGTGGATGATGGCC +
Preference number: 4 (lower is better)
Translates to: HVAENDFAEERQMFQANRADSRG*RGWMMA
Trigger: GGCCATCATCCACCCTCTTCAGCCCCGGCTGTCGGC...CCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAGCCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTTGGTCTCCAGGCGGCTaGCCTTGTACACGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSWSPGG*PCTRCS
Trigger: AGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCA...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGAGCGAAAGGCATGCTTaGAGCCCAGACGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGSERHA*SPDGTC
Trigger: ACAGGTTCCGTCTGGGCTTCAAGCATGCCTTTCGCT...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTAGCATGGTCTCTGTGGTaGAGTAGTAGCCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVAWSLW*SSSPVG
Trigger: TCCCACAGGGCTACTACTCCACCACAGAGACCATGC...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGTGGGCATGGTCTCTGTaGTGGAGTAGTAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGWAWSL*WSSSPV
Trigger: CACAGGGCTACTACTCCACCACAGAGACCATGCCCA...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGTGCACACTACTCTGCTaGGCATGGTCTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGCTLLC*AWSLWW
Trigger: CCACCACAGAGACCATGCCCAGCAGAGTAGTGTGCA...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCTTGTACACGCTGCTCTaGGTCTGGAGGTATCGGGTG +
Preference number: 4 (lower is better)
Translates to: SGIAGTRISSGWKELCVLLYTLL*VWRYRV
Trigger: CACCCGATACCTCCAGACCCAGAGCAGCGTGTACAA...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTTGCACACTACTCTGCTaGGCATGGTCTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASSGIAGTRISSGWKELCCTLLC*AWSLWW
Trigger: CCACCACAGAGACCATGCCCAGCAGAGTAGTGTGCA...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCACGCTGCTCTGGGTCTaGAGGTATCGGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGITLLWV*RYRVDF
Trigger: GAAATCCACCCGATACCTCCAGACCCAGAGCAGCGT...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTCTTGGGACCTTCCTCTaGCTCATCTTCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSLGTFL*LIFMGS
Trigger: GGAGCCCATGAAGATGAGCCAGAGGAAGGTCCCAAG...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCCTTGGGACCTTCCTCTaGCTCATCTTCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGILGTFL*LIFMGS
Trigger: GGAGCCCATGAAGATGAGCCAGAGGAAGGTCCCAAG...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp CCTCCCACCAAGGTCCTTCCACAGCCTCCAGTTTCATaGAATATGGGGCAGACTTCAGAGCTCCTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: PPTKVLPQPPVS*NMGQTSELLSK
Trigger: CTTAGAGAGGAGCTCTGAAGTCTGCCCCATATTCAATGAAACTGGAGGCTGTGGAAGGACCTTGGTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCGCTGAAGAGGGTGGATaGTGGCCATGTATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SGIAGTRISSGWKELCVLAEEGG*WPCICQ
Trigger: TTGACAGATACATGGCCATCATCCACCCTCTTCAGC...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCCACCACTGTATTGAATaGAGCCATGCAGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLHHCIE*SHAGLS
Trigger: GCTGAGGCCTGCATGGCTGCATTCAATACAGTGGTG...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCTCATGCACACTACTCTaGTGGGCATGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGISCTLL*WAWSLW
Trigger: CCACAGAGACCATGCCCAGCAGAGTAGTGTGCATGA...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTTCATGCACACTACTCTaGTGGGCATGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSSCTLL*WAWSLW
Trigger: CCACAGAGACCATGCCCAGCAGAGTAGTGTGCATGA...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGAGGCCACAGCTGTCATaGAGTAGATACTGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGRPQLS*SRYWRR
Trigger: TCTTCGCCAGTATCTACTCCATGACAGCTGTGGCCT...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCCTACTCTGCTGGGCATaGTCTCTGTGGTGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGILLCWA*SLWWSS
Trigger: ACTACTCCACCACAGAGACCATGCCCAGCAGAGTAG...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp TTCCAGCCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTTGCTGGGGATCAGTTCACCACTGTATTaGATGCAGCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FQPHLRDRKKEHAPLLGISSPLY*MQPCRP
Trigger: AGGCCTGCATGGCTGCATTCAATACAGTGGTGAACT...GATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTTGTTGGTGGAGGTGTTaGGGAAGAGATCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ASSGIAGTRISSGWKELCCWWRC*GRDQSP
Trigger: TGGACTCTGATCTCTTCCCCAACACCTCCACCAACA...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTAACTCAGAAGTGTTGGTaGAGGTGTTGGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVTQKCW*RCWGRD
Trigger: ATCTCTTCCCCAACACCTCCACCAACACTTCTGAGT...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTCCTGTTGGGATGTTCTaGCCACTCAATCATGCACAC +
Preference number: 4 (lower is better)
Translates to: ASSGIAGTRISSGWKELCPVGMF*PLNHAH
Trigger: GTGTGCATGATTGAGTGGCCAGAACATCCCAACAGG...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTACTTAAGGTAGAGATCTaGGTTGATGTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVLKVEI*VDVGQE
Trigger: CTCCTGCCCTACATCAACCCAGATCTCTACCTTAAG...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTTCTGGAGGTATCGGGTaGATTTCATTTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSSGGIG*ISFPAP
Trigger: AGGGGCTGGAAATGAAATCCACCCGATACCTCCAGA...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp GAAAGACAGATGTTCCAGGCAAATAGGTCTGCTGCCTaGCAGAATCCCTCCCCAGATAAGCACCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: ERQMFQANRSAA*QNPSPDKHLAC
Trigger: GCATGCAAGGTGCTTATCTGGGGAGGGATTCTGCAAGGCAGCAGACCTATTTGCCTGGAACATCTGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp CCACATCTGAGAGACAGAAAGAAAGAGCATGCTCCCTaGCTGGGGATCCTGAAGCCGTTTCAGGATGTGACA +
Preference number: 4 (lower is better)
Translates to: PHLRDRKKEHAP*LGILKPFQDVT
Trigger: TGTCACATCCTGAAACGGCTTCAGGATCCCCAGCAAGGGAGCATGCTCTTTCTTTCTGTCTCTCAGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATGGTCTCCAGGCGGCTaGCCTTGTACACGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGWSPGG*PCTRCS
Trigger: AGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCA...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTTCACCAGGAAATAATTaGTCACTGTCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMASPGNN*SLSSFS
Trigger: AGAGAATGAGGACAGTGACCAATTATTTCCTGGTGA...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCCGAAGAGAGCAGCAATaGGGAAGAAGTTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: SGIAGTRISSGWKELCVLRREQQ*GRSCET
Trigger: AGTTTCACAACTTCTTCCCCATTGCTGCTCTCTTCG...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTCTTAAGGTAGAGATCTaGGTTGATGTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ASSGIAGTRISSGWKELCLKVEI*VDVGQE
Trigger: CTCCTGCCCTACATCAACCCAGATCTCTACCTTAAG...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATAGGGCTCCCACCACAGTaGAGATGGTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIGLPPQ*RWWSPG
Trigger: GCCTGGAGACCACCATCTCCACTGTGGTGGGAGCCC...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp CTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGTCTGCTGGGTAGAGATCTGGGTTaGTGTAGGGCAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRMTSLKKDRCSRQIGLLGRDLG*CRAGGR
Trigger: TCTTCCTCCTGCCCTACATCAACCCAGATCTCTACC...CAGCAGACCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGGGTGAGATCCAAGGATaGAGGTGTGGCCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMGEIQG*RCGLGT
Trigger: GGTCCCAAGGCCACACCTTCATCCTTGGATCTCACC...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp CTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGTCTGCTGCTGGCCACTCAATCATaGACACTACTCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRMTSLKKDRCSRQIGLLLATQS*TLLCWA
Trigger: TGCCCAGCAGAGTAGTGTGCATGATTGAGTGGCCAG...CAGCAGACCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp AAAGACTCGATTGGTCAGAGCAGGAAGTCCACACACTaGTCCCTCTCAATGCTGTTCTCAGAACTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: KDSIGQSRKSTH*SLSMLFSELGC
Trigger: ACAACCCAGTTCTGAGAACAGCATTGAGAGGGACAAGTGTGTGGACTTCCTGCTCTGACCAATCGAGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGAAGCGAAAGGCATGCTTaGAGCCCAGACGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGSERHA*SPDGTC
Trigger: ACAGGTTCCGTCTGGGCTTCAAGCATGCCTTTCGCT...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTGTCCTCATTCTCTTGTaGGCCAAAATGATCCATATC +
Preference number: 4 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSVLILL*AKMIHI
Trigger: GATATGGATCATTTTGGCCCACAAGAGAATGAGGAC...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp CTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGTCTGCTGCCTGTTGGGATGTTCTaGCCACTCAATCATGCACAC +
Preference number: 4 (lower is better)
Translates to: LRMTSLKKDRCSRQIGLLPVGMF*PLNHAH
Trigger: GTGTGCATGATTGAGTGGCCAGAACATCCCAACAGG...CAGCAGACCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GAGAATATTTACACACACCCATCTCTAGGGACTGACAGCCCTGGTATTTTTGATACGCTGCTCTGGGTCTaGAGGTATCGGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: ENIYTHPSLGTDSPGIFDTLLWV*RYRVDF
Trigger: GAAATCCACCCGATACCTCCAGACCCAGAGCAGCGT...ATCAAAAATACCAGGGCTGTCAGTCCCTAGAGATGGGTGTGTGTAAATATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATTGTACACGCTGCTCTaGGTCTGGAGGTATCGGGTG +
Preference number: 4 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGLYTLL*VWRYRV
Trigger: CACCCGATACCTCCAGACCCAGAGCAGCGTGTACAA...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TTCAGGAATGACCCCTTTCTACGGCCATTCTTTTCTCCAGGCCTGTGTCCTCTCTCACCAGGAAATAATTaGTCACTGTCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: FRNDPFLRPFFSPGLCPLSPGNN*SLSSFS
Trigger: AGAGAATGAGGACAGTGACCAATTATTTCCTGGTGA...GAGAGGACACAGGCCTGGAGAAAAGAATGGCCGTAGAAAGGGGTCATTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGCTACTCTGCTGGGCATaGTCTCTGTGGTGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMLLCWA*SLWWSS
Trigger: ACTACTCCACCACAGAGACCATGCCCAGCAGAGTAG...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp TATGCTGATGCCCTCAAAGGGTTAGACCCAACAAGGCTGGTAGAAGTTATAAATGCTGAAGAGGGTGGATaGTGGCCATGTATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: YADALKGLDPTRLVEVINAEEGG*WPCICQ
Trigger: TTGACAGATACATGGCCATCATCCACCCTCTTCAGC...ATTTATAACTTCTACCAGCCTTGTTGGGTCTAACCCTTTGAGGGCATCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATAGACCGTATAGGCGGCTaGCCAAAGGACAATTTGCCA +
Preference number: 4 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIDRIGG*PKDNLP
Trigger: TGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTC...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATACCACACGTTGTGGACTaGGTAGGTGAAGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIPHVVD*VGEVHH
Trigger: GTGGTGAACTTCACCTACGCAGTCCACAACGTGTGG...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCACAGCAGCGAAAGGCATaGTTGAAGCCCAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: LRSYYTWSEISHISYRFPQQRKA*LKPRRN
Trigger: GTTCCGTCTGGGCTTCAAGCATGCCTTTCGCTGCTG...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp GAGAATATTTACACACACCCATCTCTAGGGACTGACAGCCCTGGTATTTTTGATTGTTGGTGGAGGTGTTaGGGAAGAGATCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ENIYTHPSLGTDSPGIFDCWWRC*GRDQSP
Trigger: TGGACTCTGATCTCTTCCCCAACACCTCCACCAACA...ATCAAAAATACCAGGGCTGTCAGTCCCTAGAGATGGGTGTGTGTAAATATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp CATGTGGCTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGCGAAGAGAGCAGCAATaGGGAAGAAGTTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: HVAENDFAEERQMFQANRRREQQ*GRSCET
Trigger: AGTTTCACAACTTCTTCCCCATTGCTGCTCTCTTCG...CCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAGCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp TATGCTGATGCCCTCAAAGGGTTAGACCCAACAAGGCTGGTAGAAGTTATAAATAGGCCACAGCTGTCATaGAGTAGATACTGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: YADALKGLDPTRLVEVINRPQLS*SRYWRR
Trigger: TCTTCGCCAGTATCTACTCCATGACAGCTGTGGCCT...ATTTATAACTTCTACCAGCCTTGTTGGGTCTAACCCTTTGAGGGCATCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGTCTGGAGGTATCGGGTaGATTTCATTTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMSGGIG*ISFPAP
Trigger: AGGGGCTGGAAATGAAATCCACCCGATACCTCCAGA...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp CAGGAATTGACGACATTTTTACAAGTTAAATGGTCTTaGGAGCAGGGGCAATGGGAAGCTTGCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QELTTFLQVKWS*EQGQWEACWSS
Trigger: AGAGGACCAGCAAGCTTCCCATTGCCCCTGCTCCAAAGACCATTTAACTTGTAAAAATGTCGTCAATTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCAGGTAGAGATCTGGGTTaGTGTAGGGCAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRSYYTWSEISHISYRFPGRDLG*CRAGGR
Trigger: TCTTCCTCCTGCCCTACATCAACCCAGATCTCTACC...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGAGCCCAAAGGACAATTTaGCAGGTAGGTTGCACAAAC +
Preference number: 4 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGAQRTI*QVGCTN
Trigger: GTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGC...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATACCCTACCACAGTGTATaGATAGCCAATCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIPYHSV*IANHQQ
Trigger: CTGCTGGTGATTGGCTATGCATACACTGTGGTAGGG...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CCA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGACTCAGAAGTGTTGGTaGAGGTGTTGGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMTQKCW*RCWGRD
Trigger: ATCTCTTCCCCAACACCTCCACCAACACTTCTGAGT...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR TCA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCAAGTTCACCACTGTATTaGATGCAGCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRSYYTWSEISHISYRFPSSPLY*MQPCRP
Trigger: AGGCCTGCATGGCTGCATTCAATACAGTGGTGAACT...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATAGCCCAAAGGACAATTTaGCAGGTAGGTTGCACAAAC +
Preference number: 4 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIAQRTI*QVGCTN
Trigger: GTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGC...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp CATGTGGCTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGAGAAGTTGTGAAACTTaGAGTAAAAGAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: HVAENDFAEERQMFQANRRSCET*SKRGRS
Trigger: ACTACGGCCTCTTTTACTGCAAGTTTCACAACTTCT...CCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAGCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp CAGCTGGCTTGTGTAGACATATTCAGTCAGAGTTGGTaGTACTGGGGACACAATGCAGAAGAATCCAATATT +
Preference number: 4 (lower is better)
Translates to: QLACVDIFSQSW*YWGHNAEESNI
Trigger: AATATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGTCTACACAAGCCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp AACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTaGGATCAATGGGAGAATATTTACACACACCCATCT +
Preference number: 4 (lower is better)
Translates to: NFPGEGICGEGL*DQWENIYTHPS
Trigger: AGATGGGTGTGTGTAAATATTCTCCCATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp TTTCAGTTCTTGGCTCTTGGCAGACTAAGTGTCCTTTaGGATTGGTGGATCCTTCAAACTCTTATAGACAGA +
Preference number: 4 (lower is better)
Translates to: FQFLALGRLSVL*DWWILQTLIDR
Trigger: TCTGTCTATAAGAGTTTGAAGGATCCACCAATCCAAAAGGACACTTAGTCTGCCAAGAGCCAAGAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR GCA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGAGAAGTTGTGAAACTTaGAGTAAAAGAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMRSCET*SKRGRS
Trigger: ACTACGGCCTCTTTTACTGCAAGTTTCACAACTTCT...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp AGGAAACACAGACACTCAAAGAAACACTTAGAGTATTaGGTTCAGCTCTGCTGCTTTACAAAGAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RKHRHSKKHLEY*VQLCCFTKKEK
Trigger: CTTTTCCTTCTTTGTAAAGCAGCAGAGCTGAACCAAATACTCTAAGTGTTTCTTTGAGTGTCTGTGTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
3UTR CAA 72 bp ACAGAGCACAAATCACAGTGTTCTCACAAACAGGAATaGACGACATTTTTACAAGTTAAATGGTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TEHKSQCSHKQE*TTFLQVKWSLE
Trigger: CTCCAAAGACCATTTAACTTGTAAAAATGTCGTCAATTCCTGTTTGTGAGAACACTGTGATTTGTGCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS TCA 90 bp CTTCATGGGCTCCCACCACAGTGGAGATGGTGGTCTCCAGGCGGCTaGCCTTGTACACGCTGCTCTGGGTCTGGAGGTATCGGGTGGATT +
Preference number: 5 (lower is better)
Translates to: LHGLPPQWRWWSPGG*PCTRCSGSGGIGWI
Trigger: AATCCACCCGATACCTCCAGACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCACCATCTCCACTGTGGTGGGAGCCCATGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 90 bp AAGGATGAAGGTGTGGCCTTGGGACCTTCCTCTGGCTCATCTTCATaGGCTCCCACCACAGTGGAGATGGTGGTCTCCAGGCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: KDEGVALGPSSGSSS*APTTVEMVVSRRLT
Trigger: GGTCAGCCGCCTGGAGACCACCATCTCCACTGTGGTGGGAGCCCATGAAGATGAGCCAGAGGAAGGTCCCAAGGCCACACCTTCATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTATCCAGGCGGCTGACCTaGTACACGCTGCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVSRRLT*YTLLWV
Trigger: GACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGA...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGTCCAGGCGGCTGACCTaGTACACGCTGCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGSRRLT*YTLLWV
Trigger: GACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGA...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCCAGCGAAAGGCATGCTaGAAGCCCAGACGGAACCTG +
Preference number: 5 (lower is better)
Translates to: SGIAGTRISSGWKELCVLQRKAC*KPRRNL
Trigger: CAGGTTCCGTCTGGGCTTCAAGCATGCCTTTCGCTG...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp GAGTCTGAAGAGAAGAGGCAAGGCTCCTCTTTCCAGGAATGTAGCTGCAGAGGGGCGCTTGGCAGAGACTaGCTCATGGTAACGGTCAGA +
Preference number: 5 (lower is better)
Translates to: ESEEKRQGSSFQECSCRGALGRD*LMVTVR
Trigger: TCTGACCGTTACCATGAGCAAGTCTCTGCCAAGCGC...CCCTCTGCAGCTACATTCCTGGAAAGAGGAGCCTTGCCTCTTCTCTTCAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCTTGACCACCTTGCGCTaGGCAGAGACTTGCTCATGG +
Preference number: 5 (lower is better)
Translates to: SGIAGTRISSGWKELCVLLTTLR*AETCSW
Trigger: CCATGAGCAAGTCTCTGCCAAGCGCAAGGTGGTCAA...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp AAGAGCGATGGCACTGGGATCCCACAGGTTGGAGGGAATGCAGGAAGGATGGCTATCATTTTGACCACCTaGCGCTTGGCAGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: KSDGTGIPQVGGNAGRMAIILTT*RLAETC
Trigger: GCAAGTCTCTGCCAAGCGCAAGGTGGTCAAAATGAT...AGCCATCCTTCCTGCATTCCCTCCAACCTGTGGGATCCCAGTGCCATCGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp GCATCATCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGATGAAGGTGTGGCCTaGGGACCTTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ASSGIAGTRISSGWKELCDEGVA*GPSSGS
Trigger: TGAGCCAGAGGAAGGTCCCAAGGCCACACCTTCATC...ACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGATGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS TCA 90 bp TTTCTGTCATGGTCTTCGAGTTGCTTCGAGAGGAGCCATTGGAGGTaGGATCCAAGGATGAAGGTGTGGCCTTGGGACCTTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLSWSSSCFERSHWR*DPRMKVWPWDLPLA
Trigger: AGCCAGAGGAAGGTCCCAAGGCCACACCTTCATCCTTGGATCTCACCTCCAATGGCTCCTCTCGAAGCAACTCGAAGACCATGACAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 90 bp TACGTTGCCCACCACGGAAGTCACCACGATGACCGTATAGGCGGCTaGCCAAAGGACAATTTGCCAGGTAGGTTGCACAAACTGGTTAGA +
Preference number: 5 (lower is better)
Translates to: YVAHHGSHHDDRIGG*PKDNLPGRLHKLVR
Trigger: TCTAACCAGTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTCATCGTGGTGACTTCCGTGGTGGGCAACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCACAAAGATGACCACTTaGGTAGCAGTGGCCGACAGC +
Preference number: 5 (lower is better)
Translates to: SGIAGTRISSGWKELCVLTKMTT*VAVADS
Trigger: GCTGTCGGCCACTGCTACCAAAGTGGTCATCTTTGT...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 90 bp ACGCTTTCTCGTAAGTCCTGTTGGGATGTTCTGGCCACTCAATCATaGACACTACTCTGCTGGGCATGGTCTCTGTGGTGGAGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: TLSRKSCWDVLATQS*TLLCWAWSLWWSSS
Trigger: GCTACTACTCCACCACAGAGACCATGCCCAGCAGAGTAGTGTGCATGATTGAGTGGCCAGAACATCCCAACAGGACTTACGAGAAAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TCAGGAATAGCAGGGACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCTTAGACTCAGAAGTGTaGGTGGAGGTGTTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SGIAGTRISSGWKELCVLLDSEV*VEVLGK
Trigger: CTTCCCCAACACCTCCACCAACACTTCTGAGTCTAA...GAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTCCCTGCTATTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 90 bp CACACAGATGTGGTACGCTTTCTCGTAAGTCCTGTTGGGATGTTCTaGCCACTCAATCATGCACACTACTCTGCTGGGCATGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HTDVVRFLVSPVGMF*PLNHAHYSAGHGLC
Trigger: ACAGAGACCATGCCCAGCAGAGTAGTGTGCATGATTGAGTGGCCAGAACATCCCAACAGGACTTACGAGAAAGCGTACCACATCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TCTTTCCAGGAATGTAGCTGCAGAGGGCAGCCTCCCTCCTCTACACCATGTGTATGCCCAAAGGACAATTaGCCAGGTAGGTTGCACAAA +
Preference number: 5 (lower is better)
Translates to: SFQECSCRGQPPSSTPCVCPKDN*PGRLHK
Trigger: TTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCA...TACACATGGTGTAGAGGAGGGAGGCTGCCCTCTGCAGCTACATTCCTGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 90 bp GTGAAACTTGCAGTAAAAGAGGCCGTAGTACCACACGTTGTGGACTaGGTAGGTGAAGTTCACCACTGTATTGAATGCAGCCATGCAGGC +
Preference number: 5 (lower is better)
Translates to: VKLAVKEAVVPHVVD*VGEVHHCIECSHAG
Trigger: GCCTGCATGGCTGCATTCAATACAGTGGTGAACTTCACCTACGCAGTCCACAACGTGTGGTACTACGGCCTCTTTTACTGCAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 90 bp AGATACTGGCGAAGAGAGCAGCAATGGGGAAGAAGTTGTGAAACTTaGAGTAAAAGAGGCCGTAGTACCACACGTTGTGGACTGCGTAGG +
Preference number: 5 (lower is better)
Translates to: RYWRREQQWGRSCET*SKRGRSTTRCGLRR
Trigger: CCTACGCAGTCCACAACGTGTGGTACTACGGCCTCTTTTACTGCAAGTTTCACAACTTCTTCCCCATTGCTGCTCTCTTCGCCAGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp CTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGTCTGCTGTTGACCACCTTGCGCTaGGCAGAGACTTGCTCATGG +
Preference number: 5 (lower is better)
Translates to: LRMTSLKKDRCSRQIGLLLTTLR*AETCSW
Trigger: CCATGAGCAAGTCTCTGCCAAGCGCAAGGTGGTCAA...CAGCAGACCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp GACAAGAATCTCCTCAGGGTGGAAGGAGCTGTGTGTCCTCAGTTTGGGCAAAGTACTGTCCTCATTCTCTaGTGGGCCAAAATGATCCAT +
Preference number: 5 (lower is better)
Translates to: DKNLLRVEGAVCPQFGQSTVLIL*WAKMIH
Trigger: ATGGATCATTTTGGCCCACAAGAGAATGAGGACAGT...ACTTTGCCCAAACTGAGGACACACAGCTCCTTCCACCCTGAGGAGATTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGCAGCGAAAGGCATGCTaGAAGCCCAGACGGAACCTG +
Preference number: 5 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMQRKAC*KPRRNL
Trigger: CAGGTTCCGTCTGGGCTTCAAGCATGCCTTTCGCTG...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATAGATGAAGGTGTGGCCTaGGGACCTTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIDEGVA*GPSSGS
Trigger: TGAGCCAGAGGAAGGTCCCAAGGCCACACCTTCATC...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp CTGAGAATGACTTCGCTGAAGAAAGACAGATGTTCCAGGCAAATAGGTCTGCTGTGCCCAAAGGACAATTaGCCAGGTAGGTTGCACAAA +
Preference number: 5 (lower is better)
Translates to: LRMTSLKKDRCSRQIGLLCPKDN*PGRLHK
Trigger: TTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCA...CAGCAGACCTATTTGCCTGGAACATCTGTCTTTCTTCAGCGAAGTCATTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATAGCGCTTGGCAGAGACTaGCTCATGGTAACGGTCAGA +
Preference number: 5 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPIALGRD*LMVTVR
Trigger: TCTGACCGTTACCATGAGCAAGTCTCTGCCAAGCGC...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp AGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGATCAATGAAGTTCACCACTGTATaGAATGCAGCCATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RGKLSWRRNLWRRAFGSMKFTTV*NAAMQA
Trigger: GGCCTGCATGGCTGCATTCAATACAGTGGTGAACTT...CATTGATCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp ACATATTCAGTCAGAGTTGGTTGTACTGGGGACACAATGCAGAAGAATCCAATAACAAAGATGACCACTTaGGTAGCAGTGGCCGACAGC +
Preference number: 5 (lower is better)
Translates to: TYSVRVGCTGDTMQKNPITKMTT*VAVADS
Trigger: GCTGTCGGCCACTGCTACCAAAGTGGTCATCTTTGT...TATTGGATTCTTCTGCATTGTGTCCCCAGTACAACCAACTCTGACTGAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp TGTCAAAGAGGAAAACTTTCCTGGAGAAGGAATTTGTGGAGAAGGGCTTTTGGAATCATTTTGACCACCTaGCGCTTGGCAGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: CQRGKLSWRRNLWRRAFGIILTT*RLAETC
Trigger: GCAAGTCTCTGCCAAGCGCAAGGTGGTCAAAATGAT...TCCAAAAGCCCTTCTCCACAAATTCCTTCTCCAGGAAAGTTTTCCTCTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS-3UTR CAA 90 bp CTTCGCTCATACTACACATGGAGTGAAATTTCTCATATCAGTTATAGGTTCCCAACTGTCCTCATTCTCTaGTGGGCCAAAATGATCCAT +
Preference number: 5 (lower is better)
Translates to: LRSYYTWSEISHISYRFPTVLIL*WAKMIH
Trigger: ATGGATCATTTTGGCCCACAAGAGAATGAGGACAGT...TGGGAACCTATAACTGATATGAGAAATTTCACTCCATGTGTAGTATGAGCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS TCA 72 bp CTCCCACCACAGTGGAGATGGTGGTCTCCAGGCGGCTaGCCTTGTACACGCTGCTCTGGGTCTGGAGGTATC +
Preference number: 6 (lower is better)
Translates to: LPPQWRWWSPGG*PCTRCSGSGGI
Trigger: GATACCTCCAGACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCACCATCTCCACTGTGGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 72 bp ACCACAGTGGAGATGGTGGTCTCCAGGCGGCTGACCTaGTACACGCTGCTCTGGGTCTGGAGGTATCGGGTG +
Preference number: 6 (lower is better)
Translates to: TTVEMVVSRRLT*YTLLWVWRYRV
Trigger: CACCCGATACCTCCAGACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCACCATCTCCACTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 90 bp TGGGCTCCCACCACAGTGGAGATGGTGGTCTCCAGGCGGCTGACCTaGTACACGCTGCTCTGGGTCTGGAGGTATCGGGTGGATTTCATT +
Preference number: 6 (lower is better)
Translates to: WAPTTVEMVVSRRLT*YTLLWVWRYRVDFI
Trigger: AATGAAATCCACCCGATACCTCCAGACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCACCATCTCCACTGTGGTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp TCCAGGCGGCTGACCTTGTACACGCTGCTCTGGGTCTaGAGGTATCGGGTGGATTTCATTTCCAGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: SRRLTLYTLLWV*RYRVDFISSPS
Trigger: TGAGGGGCTGGAAATGAAATCCACCCGATACCTCCAGACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp GTGGTCTCCAGGCGGCTGACCTTGTACACGCTGCTCTaGGTCTGGAGGTATCGGGTGGATTTCATTTCCAGC +
Preference number: 6 (lower is better)
Translates to: VVSRRLTLYTLL*VWRYRVDFISS
Trigger: GCTGGAAATGAAATCCACCCGATACCTCCAGACCCAGAGCAGCGTGTACAAGGTCAGCCGCCTGGAGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS TCA 72 bp TCACCACTACGTTGCCCACCACGGAAGTCACCACGATaGCCGTATAGGCGGCTGCCCAAAGGACAATTTGCC +
Preference number: 6 (lower is better)
Translates to: SPLRCPPRKSPR*PYRRLPKGQFA
Trigger: GGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTCATCGTGGTGACTTCCGTGGTGGGCAACGTAGTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 72 bp CCAGCACTGATGAAAGGGCAGCAGCGAAAGGCATGCTaGAAGCCCAGACGGAACCTGTCATTGAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PALMKGQQRKAC*KPRRNLSLRQQ
Trigger: CTGCTGCCTCAATGACAGGTTCCGTCTGGGCTTCAAGCATGCCTTTCGCTGCTGCCCTTTCATCAGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 90 bp CTGGAGCTTTCTGTCATGGTCTTCGAGTTGCTTCGAGAGGAGCCATaGGAGGTGAGATCCAAGGATGAAGGTGTGGCCTTGGGACCTTCC +
Preference number: 6 (lower is better)
Translates to: LELSVMVFELLREEP*EVRSKDEGVALGPS
Trigger: GGAAGGTCCCAAGGCCACACCTTCATCCTTGGATCTCACCTCCAATGGCTCCTCTCGAAGCAACTCGAAGACCATGACAGAAAGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 72 bp CACCACGGAAGTCACCACGATGACCGTATAGGCGGCTaGCCAAAGGACAATTTGCCAGGTAGGTTGCACAAA +
Preference number: 6 (lower is better)
Translates to: HHGSHHDDRIGG*PKDNLPGRLHK
Trigger: TTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTCATCGTGGTGACTTCCGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 72 bp CGTAAGTCCTGTTGGGATGTTCTGGCCACTCAATCATaGACACTACTCTGCTGGGCATGGTCTCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: RKSCWDVLATQS*TLLCWAWSLWW
Trigger: CCACCACAGAGACCATGCCCAGCAGAGTAGTGTGCATGATTGAGTGGCCAGAACATCCCAACAGGACTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp CCTTGTACACGCTGCTCTGGGTCTGGAGGTATCGGGTaGATTTCATTTCCAGCCCCTCATAATCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: PCTRCSGSGGIG*ISFPAPHNHQH
Trigger: GTGCTGGTGATTATGAGGGGCTGGAAATGAAATCCACCCGATACCTCCAGACCCAGAGCAGCGTGTACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 72 bp GATCATCATTTTGACCACCTTGCGCTTGGCAGAGACTaGCTCATGGTAACGGTCAGAGGAGTCACCGGGGAT +
Preference number: 6 (lower is better)
Translates to: DHHFDHLALGRD*LMVTVRGVTGD
Trigger: ATCCCCGGTGACTCCTCTGACCGTTACCATGAGCAAGTCTCTGCCAAGCGCAAGGTGGTCAAAATGATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 90 bp GATGACCGTATAGGCGGCTGCCCAAAGGACAATTTGCCAGGTAGGTaGCACAAACTGGTTAGACTCAGAAGTGTTGGTGGAGGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: DDRIGGCPKDNLPGR*HKLVRLRSVGGGVG
Trigger: CCCAACACCTCCACCAACACTTCTGAGTCTAACCAGTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 90 bp GGAAGTCACCACGATGACCGTATAGGCGGCTGCCCAAAGGACAATTaGCCAGGTAGGTTGCACAAACTGGTTAGACTCAGAAGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: GSHHDDRIGGCPKDN*PGRLHKLVRLRSVG
Trigger: ACCAACACTTCTGAGTCTAACCAGTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTCATCGTGGTGACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 72 bp CTCACTGGCCCACAGTGTAATCCCTACCACAGTGTATaGATAGCCAATCACCAGCAGAGGCAGGAAGTAGAT +
Preference number: 6 (lower is better)
Translates to: LTGPQCNPYHSV*IANHQQRQEVD
Trigger: ATCTACTTCCTGCCTCTGCTGGTGATTGGCTATGCATACACTGTGGTAGGGATTACACTGTGGGCCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp GCCCAAAGGACAATTTGCCAGGTAGGTTGCACAAACTaGTTAGACTCAGAAGTGTTGGTGGAGGTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: AQRTICQVGCTN*LDSEVLVEVLG
Trigger: CCCCAACACCTCCACCAACACTTCTGAGTCTAACCAGTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp GTGGTACGCTTTCTCGTAAGTCCTGTTGGGATGTTCTaGCCACTCAATCATGCACACTACTCTGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: VVRFLVSPVGMF*PLNHAHYSAGH
Trigger: ATGCCCAGCAGAGTAGTGTGCATGATTGAGTGGCCAGAACATCCCAACAGGACTTACGAGAAAGCGTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 72 bp CACGATGACCGTATAGGCGGCTGCCCAAAGGACAATTaGCCAGGTAGGTTGCACAAACTGGTTAGACTCAGA +
Preference number: 6 (lower is better)
Translates to: HDDRIGGCPKDN*PGRLHKLVRLR
Trigger: TCTGAGTCTAACCAGTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCAGCCGCCTATACGGTCATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 72 bp GCAGTAAAAGAGGCCGTAGTACCACACGTTGTGGACTaGGTAGGTGAAGTTCACCACTGTATTGAATGCAGC +
Preference number: 6 (lower is better)
Translates to: AVKEAVVPHVVD*VGEVHHCIECS
Trigger: GCTGCATTCAATACAGTGGTGAACTTCACCTACGCAGTCCACAACGTGTGGTACTACGGCCTCTTTTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CAA 72 bp ATAGGCGGCTGCCCAAAGGACAATTTGCCAGGTAGGTaGCACAAACTGGTTAGACTCAGAAGTGTTGGTGGA +
Preference number: 6 (lower is better)
Translates to: IGGCPKDNLPGR*HKLVRLRSVGG
Trigger: TCCACCAACACTTCTGAGTCTAACCAGTTTGTGCAACCTACCTGGCAAATTGTCCTTTGGGCAGCCGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS GCA 72 bp CGAAGAGAGCAGCAATGGGGAAGAAGTTGTGAAACTTaGAGTAAAAGAGGCCGTAGTACCACACGTTGTGGA +
Preference number: 6 (lower is better)
Translates to: RREQQWGRSCET*SKRGRSTTRCG
Trigger: TCCACAACGTGTGGTACTACGGCCTCTTTTACTGCAAGTTTCACAACTTCTTCCCCATTGCTGCTCTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp TCACACAGATGTGGTACGCTTTCTCGTAAGTCCTGTTaGGATGTTCTGGCCACTCAATCATGCACACTACTC +
Preference number: 6 (lower is better)
Translates to: SHRCGTLSRKSC*DVLATQSCTLL
Trigger: GAGTAGTGTGCATGATTGAGTGGCCAGAACATCCCAACAGGACTTACGAGAAAGCGTACCACATCTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2
CDS CCA 72 bp GTAGACCTGCTGGATGAACTTCTTAAGGTAGAGATCTaGGTTGATGTAGGGCAGGAGGAAGAAGATGTGGAA +
Preference number: 6 (lower is better)
Translates to: VDLLDELLKVEI*VDVGQEEEDVE
Trigger: TTCCACATCTTCTTCCTCCTGCCCTACATCAACCCAGATCTCTACCTTAAGAAGTTCATCCAGCAGGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032122.11
ENSMUST00000203775.2