Pregenerated sensors for TACO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001983Ensembl transcript IDs: ENSMUST00000002048.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TGCAGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATaGCTGCAGAAGCTTGTGCGGCCTAGGAAAGAGCCGGAGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: CSRSLIGSQLFQSLR*LQKLVRPRKEPEPS Trigger: ACTTGGCTCCGGCTCTTTCCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| 3UTR CCA 72 bp | TCAGACCGGCTGGCCAGTCTCACCTTGCATTCCAGATaGCCCGGTGATACCAACAGAGCTAAGAGTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SDRLASLTLHSR*PGDTNRAKSPP Trigger: AGGGGGACTCTTAGCTCTGTTGGTATCACCGGGCCATCTGGAATGCAAGGTGAGACTGGCCAGCCGGTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGATTGCTGCAGAAGCTTGTGCGGCCTAGGAAAGAGCCGGAGCCAAGTAGCGCCTGGATGAGGTaGGCAGCCTGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLRLLQKLVRPRKEPEPSSAWMR*AACSSS Trigger: GGAGCTGGAGCAGGCTGCTCACCTCATCCAGGCGCT...ACTTGGCTCCGGCTCTTTCCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGTCTCTGAGATTGCTGCAGAAGCTTGTGCGGCCTAGGAAAGAGCCGGAGCAGCCGGGGTTTGCATaGTGGGAGGCGCCCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: FQSLRLLQKLVRPRKEPEQPGFA*WEAPQG Trigger: TCCTTGGGGCGCCTCCCAGCATGCAAACCCCGGCTG...CTCCGGCTCTTTCCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGACTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| 3UTR CAA 72 bp | CTGGGATCAGAGTCAGACCGGCTGGCCAGTCTCACCTaGCATTCCAGATGGCCCGGTGATACCAACAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGSESDRLASLT*HSRWPGDTNRA Trigger: AGCTCTGTTGGTATCACCGGGCCATCTGGAATGCAAGGTGAGACTGGCCAGCCGGTCTGACTCTGATCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGATTGCTGCAGAAGCTTGTGCGGCCTAGGAAAGAGCCGGAGCCAAGTAGCTGCACCTTGGAGTaGGGGATGAACTCCATTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLRLLQKLVRPRKEPEPSSCTLE*GMNSIE Trigger: TTCAATGGAGTTCATCCCTCACTCCAAGGTGCAGCT...ACTTGGCTCCGGCTCTTTCCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAGCGGCTCCTGCTTCGATaGCCAGTTCTAGGGCACGCT | + |
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Preference number: 4 (lower is better) Translates to: SRSLIGSQLFQSLRLLQKRLLLR*PVLGHA Trigger: AGCGTGCCCTAGAACTGGCCATCGAAGCAGGAGCCG...CTTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| 3UTR CAA 72 bp | TCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATaGCTGCAGAAGCTTGTGCGGCCTAGGAAAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SLIGSQLFQSLR*LQKLVRPRKEP Trigger: CGGCTCTTTCCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAATTGATAACGCCTCAATaGGCAGAGAAGAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QQVSNRLSAVSVSEIAAELITPQ*AEKSLQ Trigger: CTGGAGGCTCTTCTCTGCTCATTGAGGCGTTATCAA...TTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAAGGGATGAACTCCATTaGACAGGACACAGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: QQVSNRLSAVSVSEIAAERDELH*TGHRTQ Trigger: CTGTGTCCTGTGTCCTGTTCAATGGAGTTCATCCCT...TTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAGTGTCCAGATGGCACTTaGGACCACTGTTTGATAACG | + |
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Preference number: 4 (lower is better) Translates to: SRSLIGSQLFQSLRLLQKCPDGT*DHCLIT Trigger: CGTTATCAAACAGTGGTCCCAAGTGCCATCTGGACA...CTTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAACAACTCTAAGATGTTaGCCAGGCTGCTGTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QQVSNRLSAVSVSEIAAETTLRC*PGCCCS Trigger: AGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGT...TTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAGTCAGTGCTGACTCGATaGTTGACTTGGGCATATTCT | + |
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Preference number: 4 (lower is better) Translates to: SRSLIGSQLFQSLRLLQKSVLTR*LTWAYS Trigger: AGAATATGCCCAAGTCAACCATCGAGTCAGCACTGA...CTTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 90 bp | TTAGAGAAGATTCGACTCCTTTCCATGTCCTTGGGGCCCTTGATGTaGCGGACTTTAGACCACTTATTGTGTCCCGCCGAGGCCGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: LEKIRLLSMSLGPLM*RTLDHLLCPAEAVA Trigger: CGCGACGGCCTCGGCGGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAGTCGAATCTTCTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CAA 90 bp | CCATTGCAGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTCTCCTTTCCATGTCCTaGGGGCCCTTGATGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PLQQVSNRLSAVSVSEIALLSMS*GPLMCR Trigger: CCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAG...AGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCTGCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAGCTTGTGCGGCCTAGGGTGCTGACTCGATGGTaGACTTGGGCATATTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: GSQLFQSLRLLQKLVRPRVLTRW*TWAYSC Trigger: GCAAGAATATGCCCAAGTCAACCATCGAGTCAGCAC...CCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CAA 90 bp | TTTCAGTCTCTGAGATTGCTGCAGAAGCTTGTGCGGCCTAGGAAAGAGCCGGAGCACAACTCTAAGATGTaGGCCAGGCTGCTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: FQSLRLLQKLVRPRKEPEHNSKM*ARLLLF Trigger: GAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTG...CTCCGGCTCTTTCCTAGGCCGCACAAGCTTCTGCAGCAATCTCAGAGACTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 90 bp | CTGTCTTCAGTGCTGACTCGATGGTTGACTTGGGCATATTCTTGCTaGGACACAACTCTAAGATGTTGGCCAGGCTGCTGTTGTTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LSSVLTRWLTWAYSC*DTTLRCWPGCCCSQ Trigger: CTGAGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGAAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 90 bp | TCTCTGTCTTCAGTGCTGACTCGATGGTTGACTTGGGCATATTCTTaGTGCGACACAACTCTAAGATGTTGGCCAGGCTGCTGTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SLSSVLTRWLTWAYS*CDTTLRCWPGCCCS Trigger: AGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGAAGACAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CCA 90 bp | TGCCCTTGTTTTTCTCTGTCTTCAGTGCTGACTCGATGGTTGACTTaGGCATATTCTTGCTGCGACACAACTCTAAGATGTTGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: CPCFSLSSVLTRWLT*AYSCCDTTLRCWPG Trigger: GCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGAAGACAGAGAAAAACAAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTCTCTAATAGGCTCTCAGCTGTTTCAGTCTCTGAGATTGCTGCAGAAATGTCCAGATGGCACTaGGGACCACTGTTTGATAAC | + |
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Preference number: 5 (lower is better) Translates to: QQVSNRLSAVSVSEIAAEMSRWH*GPLFDN Trigger: GTTATCAAACAGTGGTCCCAAGTGCCATCTGGACAT...TTCTGCAGCAATCTCAGAGACTGAAACAGCTGAGAGCCTATTAGAGACCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS-3UTR CAA 90 bp | AAGTCACTACTGTTATTATTGAAGATCATTTCCACTCTACGGTACCACAGGACATTGGCCAGGCTGCTGTaGTTCTCAGGGTTAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KSLLLLLKIISTLRYHRTLARLL*FSGLGP Trigger: AGGCCCTAACCCTGAGAACAACAGCAGCCTGGCCAA...TGTCCTGTGGTACCGTAGAGTGGAAATGATCTTCAATAATAACAGTAGTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CCA 90 bp | GCCATCATTCCCCCATTCTTGTTCAGGATATATTTAATGTCCAGATaGCACTTGGGACCACTGTTTGATAACGCCTCAATGAGCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: AIIPPFLFRIYLMSR*HLGPLFDNASMSRE Trigger: TTCTCTGCTCATTGAGGCGTTATCAAACAGTGGTCCCAAGTGCCATCTGGACATTAAATATATCCTGAACAAGAATGGGGGAATGATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 72 bp | GTCCTGTGTGGCGCTGCACCACAGCCGGGGTTTGCATaGTGGGAGGCGCCCCAAGGACCCACGCGGAACCCG | + |
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Preference number: 6 (lower is better) Translates to: VLCGAAPQPGFA*WEAPQGPTRNP Trigger: CGGGTTCCGCGTGGGTCCTTGGGGCGCCTCCCAGCATGCAAACCCCGGCTGTGGTGCAGCGCCACACAGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 72 bp | TTGGGGCCCTTGATGTGCCGGACTTTAGACCACTTATaGTGTCCCGCCGAGGCCGTCGCGCTGACATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LGPLMCRTLDHL*CPAEAVALTCS Trigger: GCTGCATGTCAGCGCGACGGCCTCGGCGGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | TCCATGTCCTTGGGGCCCTTGATGTGCCGGACTTTAGACCACTTATaGTGTCCCGCCGAGGCCGTCGCGCTGACATGCAGCGTCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SMSLGPLMCRTLDHL*CPAEAVALTCSVLC Trigger: ACACAGGACGCTGCATGTCAGCGCGACGGCCTCGGCGGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS TCA 72 bp | AGCCAGCTGCACCTTGGAGTGAGGGATGAACTCCATTaGACAGGACACAGGACACAGGCCCAGCGAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SQLHLGVRDELH*TGHRTQAQRVQ Trigger: CTGGACTCGCTGGGCCTGTGTCCTGTGTCCTGTTCAATGGAGTTCATCCCTCACTCCAAGGTGCAGCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS TCA 72 bp | GATGGCACTTGGGACCACTGTTTGATAACGCCTCAATaGGCAGAGAAGAGCCTCCAGGGCCACGACCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: DGTWDHCLITPQ*AEKSLQGHDPH Trigger: ATGAGGGTCGTGGCCCTGGAGGCTCTTCTCTGCTCATTGAGGCGTTATCAAACAGTGGTCCCAAGTGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 72 bp | CTGCGACACAACTCTAAGATGTTGGCCAGGCTGCTGTaGTTCTCAGGGTTAGGGCCTCCCTCTTTAACCGCC | + |
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Preference number: 6 (lower is better) Translates to: LRHNSKMLARLL*FSGLGPPSLTA Trigger: GGCGGTTAAAGAGGGAGGCCCTAACCCTGAGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 72 bp | ATTCGACTCCTTTCCATGTCCTTGGGGCCCTTGATGTaGCGGACTTTAGACCACTTATTGTGTCCCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: IRLLSMSLGPLM*RTLDHLLCPAE Trigger: CTCGGCGGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAGTCGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | GTGAGTTTAGAGAAGATTCGACTCCTTTCCATGTCCTTGGGGCCCTaGATGTGCCGGACTTTAGACCACTTATTGTGTCCCGCCGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSLEKIRLLSMSLGP*MCRTLDHLLCPAEA Trigger: GGCCTCGGCGGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAGTCGAATCTTCTCTAAACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | ATATTCTTGCTGCGACACAACTCTAAGATGTTGGCCAGGCTGCTGTaGTTCTCAGGGTTAGGGCCTCCCTCTTTAACCGCCAGGCGGATA | + |
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Preference number: 6 (lower is better) Translates to: IFLLRHNSKMLARLL*FSGLGPPSLTARRI Trigger: TATCCGCCTGGCGGTTAAAGAGGGAGGCCCTAACCCTGAGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 72 bp | GTGCTGACTCGATGGTTGACTTGGGCATATTCTTGCTaGGACACAACTCTAAGATGTTGGCCAGGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VLTRWLTWAYSC*DTTLRCWPGCC Trigger: ACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS GCA 72 bp | TCAGTGCTGACTCGATGGTTGACTTGGGCATATTCTTaGTGCGACACAACTCTAAGATGTTGGCCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVLTRWLTWAYS*CDTTLRCWPGC Trigger: GCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 72 bp | GAGAAGATTCGACTCCTTTCCATGTCCTTGGGGCCCTaGATGTGCCGGACTTTAGACCACTTATTGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: EKIRLLSMSLGP*MCRTLDHLLCP Trigger: GGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAGTCGAATCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 72 bp | TTGGGCATATTCTTGCTGCGACACAACTCTAAGATGTaGGCCAGGCTGCTGTTGTTCTCAGGGTTAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LGIFLLRHNSKM*ARLLLFSGLGP Trigger: AGGCCCTAACCCTGAGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | ATGGTTGACTTGGGCATATTCTTGCTGCGACACAACTCTAAGATGTaGGCCAGGCTGCTGTTGTTCTCAGGGTTAGGGCCTCCCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: MVDLGIFLLRHNSKM*ARLLLFSGLGPPSL Trigger: TAAAGAGGGAGGCCCTAACCCTGAGAACAACAGCAGCCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 72 bp | GTGAGTTTAGAGAAGATTCGACTCCTTTCCATGTCCTaGGGGCCCTTGATGTGCCGGACTTTAGACCACTTA | + |
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Preference number: 6 (lower is better) Translates to: VSLEKIRLLSMS*GPLMCRTLDHL Trigger: TAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAGTCGAATCTTCTCTAAACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | ATACTGAGAGTGAGTTTAGAGAAGATTCGACTCCTTTCCATGTCCTaGGGGCCCTTGATGTGCCGGACTTTAGACCACTTATTGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ILRVSLEKIRLLSMS*GPLMCRTLDHLLCP Trigger: GGGACACAATAAGTGGTCTAAAGTCCGGCACATCAAGGGCCCCAAGGACATGGAAAGGAGTCGAATCTTCTCTAAACTCACTCTCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | ATGCCCTTGTTTTTCTCTGTCTTCAGTGCTGACTCGATGGTTGACTaGGGCATATTCTTGCTGCGACACAACTCTAAGATGTTGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MPLFFSVFSADSMVD*GIFLLRHNSKMLAR Trigger: CCTGGCCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGAAGACAGAGAAAAACAAGGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CCA 72 bp | TGCCCTTGTTTTTCTCTGTCTTCAGTGCTGACTCGATaGTTGACTTGGGCATATTCTTGCTGCGACACAACT | + |
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Preference number: 6 (lower is better) Translates to: CPCFSLSSVLTR*LTWAYSCCDTT Trigger: AGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGAAGACAGAGAAAAACAAGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | ATTCCCCCATTCTTGTTCAGGATATATTTAATGTCCAGATGGCACTaGGGACCACTGTTTGATAACGCCTCAATGAGCAGAGAAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: IPPFLFRIYLMSRWH*GPLFDNASMSREEP Trigger: AGGCTCTTCTCTGCTCATTGAGGCGTTATCAAACAGTGGTCCCAAGTGCCATCTGGACATTAAATATATCCTGAACAAGAATGGGGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CCA 72 bp | CCCCCATTCTTGTTCAGGATATATTTAATGTCCAGATaGCACTTGGGACCACTGTTTGATAACGCCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: PPFLFRIYLMSR*HLGPLFDNASM Trigger: CATTGAGGCGTTATCAAACAGTGGTCCCAAGTGCCATCTGGACATTAAATATATCCTGAACAAGAATGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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| CDS CAA 90 bp | AATAAATGCCCTTGTTTTTCTCTGTCTTCAGTGCTGACTCGATGGTaGACTTGGGCATATTCTTGCTGCGACACAACTCTAAGATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: NKCPCFSLSSVLTRW*TWAYSCCDTTLRCW Trigger: CCAACATCTTAGAGTTGTGTCGCAGCAAGAATATGCCCAAGTCAACCATCGAGTCAGCACTGAAGACAGAGAAAAACAAGGGCATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002048.8 |
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