Pregenerated sensors for TACC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037313Ensembl transcript IDs: ENSMUST00000074849.13, ENSMUST00000079534.11, ENSMUST00000114426.10, ENSMUST00000138240.5, ENSMUST00000139888.5, ENSMUST00000152847.8, ENSMUST00000201633.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGAAGGTAGCTCCTTAGCCCCCGAGCTCAGCCCAGGAGGCTATTaGTACCAGGAGAGTTTGAGGAGTGGGCAGAAGAGGTGGAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: HEGSSLAPELSPGGY*YQESLRSGQKRWKA Trigger: AGCCTTCCACCTCTTCTGCCCACTCCTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTGAGCTCGGGGGCTAAGGAGCTACCTTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR CCA 90 bp | GGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTACAGGTaGTCACAGCAAGAACATAACAGAAGAGCGCTGGTTATAGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GRRGGRLQRCGGPYR*SQQEHNRRALVIAG Trigger: GCCAGCTATAACCAGCGCTCTTCTGTTATGTTCTTGCTGTGACCACCTGTAGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| 3UTR CCA 90 bp | TTCACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTaGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: FTNSSSCCFTCCGLP*IYPSSHGSGCLLPP Trigger: AGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR GCA 90 bp | AGGTCATCACAGATCCGGGTCAGCTCATCAATTTCTTTTGTCTTCTaGTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSSQIRVSSSISFVF*SRVISSEWFCICAF Trigger: GAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACAAAAGAAATTGATGAGCTGACCCGGATCTGTGATGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| 3UTR-3UTR CCA 90 bp | TACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGAGGGAGAGTTTGAGGAGTaGGCAGAAGAGGTGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: YPALHTGSPQVAYYTGGEGEFEE*AEEVEG Trigger: GCCTTCCACCTCTTCTGCCCACTCCTCAAACTCTCC...CTCACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGGTCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCAGTGGGCAGAAGAGGTaGAAGGCTCCAAAGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: AVVSRGFIPPLMALAVSCSGQKR*KAPKVW Trigger: CCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACT...GCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CCA 90 bp | TTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTAAAGGCTCCAAAGGTGTaGGGGACCCTACAGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FITGLPSSAHREPTGGLLKAPKV*GTLQVV Trigger: GACCACCTGTAGGGTCCCCCACACCTTTGGAGCCTT...TAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| 3UTR-3UTR CCA 90 bp | CTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTGGAGAGTTTGAGGAGTaGGCAGAAGAGGTGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LYYRATQLCTQGAHRWLTGEFEE*AEEVEG Trigger: GCCTTCCACCTCTTCTGCCCACTCCTCAAACTCTCC...AGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCTTTTCATGAAGGTAGCTAGTGGGCAGAAGAGGTaGAAGGCTCCAAAGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PSSHGSGCLLPPLFMKVASGQKR*KAPKVW Trigger: CCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACT...AGCTACCTTCATGAAAAGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGATGACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGTTATCCCTCCTCTCATaGCTCTGGCTGTCTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RPDDRAVFITGLPSSAHRLSLLS*LWLSLA Trigger: GGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAA...CCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGTCATCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTTGCTGTGGTCTCCCGTaGATTTATCCCTCCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LYYRATQLCTQGAHRWLTCCGLP*IYPSSH Trigger: ATGAGAGGAGGGATAAATCCACGGGAGACCACAGCA...AGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGCAGCCCAGGAGGCTATaGATACCAGGAGAGTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: RATQLCTQGAHRWLTTLGQPRRL*IPGEFE Trigger: CTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTG...CCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR TCA 72 bp | AGCTCCTTAGCCCCCGAGCTCAGCCCAGGAGGCTATTaGTACCAGGAGAGTTTGAGGAGTGGGCAGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSLAPELSPGGY*YQESLRSGQKR Trigger: CCTCTTCTGCCCACTCCTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTGAGCTCGGGGGCTAAGGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCCAGCCCAGGAGGCTATaGATACCAGGAGAGTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: VSRGFIPPLMALAVSCHLQPRRL*IPGEFE Trigger: CTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTG...GAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR CCA 72 bp | TGGTCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTaGCTGTCTCTTGCCACCTCTTTTCATGAAGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: WSPVDLSLLSWL*LSLATSFHEGS Trigger: GCTACCTTCATGAAAAGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR CCA 72 bp | AGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTaGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SSSCCFTCCGLP*IYPSSHGSGCL Trigger: GAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| 3UTR GCA 72 bp | CCACTCTTCACTAACAGCTCTTCTTGCTGTTTCACTTaGTGTGGTCTCCCGTGGATTTATCCCTCCTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: PLFTNSSSCCFT*CGLPWIYPSSH Trigger: ATGAGAGGAGGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGTGAAGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | GGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGGCCGGTAAGTTCTGGTaGCAAAAACTGGAAATCACG | + |
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Preference number: 4 (lower is better) Translates to: GLPSSAHREPTGGLLHWGAGKFW*QKLEIT Trigger: CGTGATTTCCAGTTTTTGCCACCAGAACTTACCGGC...CCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR GCA 90 bp | CCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGAGGGGCATGGAGTTCAGGTCTaGATTAAGTTGGTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PALHTGSPQVAYYTGGEGHGVQV*IKLVSL Trigger: GAGAGAGACCAACTTAATGCAGACCTGAACTCCATG...CCCCTCACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | GAGGAGTGGGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTACAGGTGGCGATCTCCTCATTTaGCAGCCTGAGCTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EEWAEEVEGSKGVGDPTGGDLLI*QPELFF Trigger: GAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCC...ACCTGTAGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | TTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTTGCCTTCCTCAGGCTTaGCTGCAAAGCCAGTACCTC | + |
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Preference number: 4 (lower is better) Translates to: LQGYPALHTGSPQVAYYTCLPQA*LQSQYL Trigger: GAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCA...AGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | TGGGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTACAGGTGGTCACGCCTTAGCCTGGCTCTaGGGTGGTACATTTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: WAEEVEGSKGVGDPTGGHALAWL*GGTFSF Trigger: GAAAGAAAATGTACCACCCCAGAGCCAGGCTAAGGC...GTGACCACCTGTAGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | ACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGTTTGTGGCCTTAGCCTaGCTCTGGGGTGGTACATTT | + |
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Preference number: 4 (lower is better) Translates to: TGLPSSAHREPTGGLLHWFVALA*LWGGTF Trigger: AAATGTACCACCCCAGAGCCAGGCTAAGGCCACAAA...CCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | AGGAGTGGGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTACAGGTGTGGATCTTCAGCGCCTaGTACCTCTGGCCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RSGQKRWKAPKVWGTLQVWIFSA*YLWPSF Trigger: AAAAGAAGGCCAGAGGTACCAGGCGCTGAAGATCCA...CACCTGTAGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | CTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACAGGTTCTAGTCCCTaGTGGGAAGGCTCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: LYYRATQLCTQGAHRWLTTGSSP*WEGSST Trigger: AGTGCTGGAGCCTTCCCATCAGGGACTAGAACCTGT...AGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR GCA 90 bp | GGCCAGATGACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGTGCCTTCCTCAGGCTTaGCTGCAAAGCCAGTACCTC | + |
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Preference number: 4 (lower is better) Translates to: GQMTELSLLQGYPALHTGCLPQA*LQSQYL Trigger: GAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCA...CCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGTCATCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | TACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGAGAGCTTTTCTTCTGCATaGATCTTCAGCGCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: YPALHTGSPQVAYYTGGESFSSA*IFSAWY Trigger: GTACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCT...CTCACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | TCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCTGCCTTGCTGTGTACCTaGGCGATCTCCTCATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SPVDLSLLSWLWLSLATSALLCT*AISSFA Trigger: GGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGC...AGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | CGAGCTCAGCCCAGGAGGCTATTGATACCAGGAGAGTTTGAGGAGTGGGCAGAAACAGGTTCTAGTTCCTaGTGGGAAGGCTCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: RAQPRRLLIPGEFEEWAETGSSS*WEGSST Trigger: AGTGCTGGAGCCTTCCCATCAGGAACTAGAACCTGT...TTCTGCCCACTCCTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTGAGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR GCA 90 bp | TACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGAGCATGGAGTTCAGGTCTaGATTAAGTTGGTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YPALHTGSPQVAYYTGGEHGVQV*IKLVSL Trigger: GAGAGAGACCAACTTAATGCAGACCTGAACTCCATG...CTCACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | TGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTTCCAGCGAGTGGTTCTaGATTTGTGCCTTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLYYRATQLCTQGAHRWLSSEWF*ICAFLR Trigger: CCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGA...AAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | TCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCTTCCAGCGAGTGGTTCTaGATTTGTGCCTTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPVDLSLLSWLWLSLATSSSEWF*ICAFLR Trigger: CCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGA...AGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | TTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTAAAGGACACACAGGGGTaGGGCAGATACCGGAACATC | + |
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Preference number: 4 (lower is better) Translates to: FITGLPSSAHREPTGGLLKDTQG*GRYRNI Trigger: GATGTTCCGGTATCTGCCCCACCCCTGTGTGTCCTT...TAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | TTTGAGGAGTGGGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTACATGGATCTTCAGCGCCTaGTACCTCTGGCCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FEEWAEEVEGSKGVGDPTWIFSA*YLWPSF Trigger: AAAAGAAGGCCAGAGGTACCAGGCGCTGAAGATCCA...TGTAGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACTCCTCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | TTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTAGCCTTGCTGTGTACCTaGGCGATCTCCTCATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: FITGLPSSAHREPTGGLLALLCT*AISSFA Trigger: GGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGC...TAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | TATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTCAGCCTCCTCCAATaGTTTGTACGCGATCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YYRATQLCTQGAHRWLTTLSLLQ*FVRDLL Trigger: GAGAAGATCGCGTACAAATCATTGGAGGAGGCTGAG...TGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | CTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGAGGGGTGGGAACATACTTCTTCAGTaGCTCTTCATTCTTCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LCTQGAHRWLTTLGVRGGNILLQ*LFILLV Trigger: TACCAGAAGAATGAAGAGTCACTGAAGAAGTATGTT...CCCACCCCTCACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | TTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTAGCTCCAAGTTCTCCTaGTGCATCACATTCACCACT | + |
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Preference number: 4 (lower is better) Translates to: LQGYPALHTGSPQVAYYTSSKFS*CITFTT Trigger: AGTGGTGAATGTGATGCAGCAGGAGAACTTGGAGCT...AGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR GCA 90 bp | TGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTCCTGAGCTTTTCTTCTaGATGGATCTTCAGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CLYYRATQLCTQGAHRWLPELFF*MDLQRL Trigger: CAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGG...AAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | TATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACAGGCGATCTCCTCATTTaGCAGCCTGAGCTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YYRATQLCTQGAHRWLTTGDLLI*QPELFF Trigger: GAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCC...TGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | CTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTGAAATCACGGCACTGTaGACTCTTTTCATTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LYYRATQLCTQGAHRWLTEITAL*TLFIGH Trigger: GTGCCCAATGAAAAGAGTTCACAGTGCCGTGATTTC...AGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR TCA 90 bp | GGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTAACATACTTCTTCAGTaGCTCTTCATTCTTCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: GYPALHTGSPQVAYYTGGNILLQ*LFILLV Trigger: TACCAGAAGAATGAAGAGTCACTGAAGAAGTATGTT...ACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | TTGCTGTGGTCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTCCTCATTTGCCAGCCTaGGCTTTTCTTCTGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: LLWSPVDLSLLSWLWLSLPHLPA*AFLLHG Trigger: TCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGG...AAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCACAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | GAGTTTGAGGAGTGGGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTATTTCTTTTGTCTTCTaGTCCAGAGTCATCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EFEEWAEEVEGSKGVGDPISFVF*SRVISS Trigger: GCTGGAGATGACTCTGGAGCAGAAGACAAAAGAAAT...AGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACTCCTCAAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGAGCTTTTCTTCTGCATaGATCTTCAGCGCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TELSLLQGYPALHTGSPQSFSSA*IFSAWY Trigger: GTACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCT...CTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCCCTCCTCTCATCTCAGCTGCCATTTaGACCACAGGTGCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLAVSLAVVSRGFIPPLISAAI*TTGASS Trigger: GGATGATGCACCTGTGGTTCAAATGGCAGCTGAGAT...GAGAGGAGGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTGGTCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTCATCACATTCACCACTaGATCCAGGTCTTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWSPVDLSLLSWLWLSLHHIHH*IQVFLA Trigger: AGCCAGAAAGACCTGGATGCAGTGGTGAATGTGATG...AAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | CTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTTCTGCCGGTAAGTTCTaGTGGCAAAAACTGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LYYRATQLCTQGAHRWLTSAGKF*WQKLEI Trigger: GATTTCCAGTTTTTGCCACCAGAACTTACCGGCAGA...AGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCTTTTCATGAAGGTAGCTGGGGCTAAAGGCCGCTaGTTTTCTTTCTGTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGSGCLLPPLFMKVAGAKGR*FSFCKK Trigger: CTTCTTACAGAAAGAAAACCAGCGGCCTTTAGCCCC...AGCTACCTTCATGAAAAGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR TCA 90 bp | ACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCCCACAGGTTCTAGTCCCTaGTGGGAAGGCTCCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNSSSCCFTCCGLPWIYPTGSSP*WEGSSK Trigger: TTTGCTGGAGCCTTCCCATCAGGGACTAGAACCTGT...GGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR TCA 90 bp | CCCCGAGCTCAGCCCAGGAGGCTATTGATACCAGGAGAGTTTGAGGAGTGGGCACCAAATATTTTGTGTTaGGGTCCTCATACTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAQPRRLLIPGEFEEWAPNILC*GPHTCF Trigger: AAAGCAAGTATGAGGACCTCAACACAAAATATTTGG...TGCCCACTCCTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTGAGCTCGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTGCCTTCCTCAGCCTCCTCCAATaGTTTGTACGCGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVFCSRVISSEWFCICAFLSLLQ*FVRDLL Trigger: GAGAAGATCGCGTACAAATCATTGGAGGAGGCTGAG...GAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGCTTCTCAAACCGTTTaGAAAGGTCAGAAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TELSLLQGYPALHTGSPQASQTV*KGQKRT Trigger: AGTCCTTTTCTGACCTTTTCAAACGGTTTGAGAAGC...CTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS-3UTR TCA 90 bp | TGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTGCTTCTCAAACCGTTTaGAAAGGTCAGAAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLYYRATQLCTQGAHRWLASQTV*KGQKRT Trigger: AGTCCTTTTCTGACCTTTTCAAACGGTTTGAGAAGC...AAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTGGTCTCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTAAGAACATAACCTTCTaGTCCAGAGTCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLWSPVDLSLLSWLWLSLKNITF*SRVISS Trigger: GCTGGAGATGACTCTGGAGCAGAAGGTTATGTTCTT...AAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGAGACCACAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139888.5 |
||
| CDS-3UTR CCA 90 bp | TCACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCGATCCTGTGTGTCTGTaGATCCCGAGGTGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTALLAVSLAVVSRGFIDPVCL*IPRWCL Trigger: CAGACACCACCTCGGGATCCACAGACACACAGGATC...GATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR CCA 90 bp | TTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTAAGCGCCTGGTACCTCTaGCCTTCTTTTTCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FITGLPSSAHREPTGGLLSAWYL*PSFSIF Trigger: GAAAATTGAAAAAGAAGGCCAGAGGTACCAGGCGCT...TAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCTTTAGCGCCTGGTACCTCTaGCCTTCTTTTTCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGFIPPLMALAVSCHLFSAWYL*PSFSIF Trigger: GAAAATTGAAAAAGAAGGCCAGAGGTACCAGGCGCT...AAAGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | TTTGTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTGCCTTCTGGATCTTCAGCGCCTaGTACCTCTGGCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FVFCSRVISSEWFCICAFWIFSA*YLWPSF Trigger: AAAAGAAGGCCAGAGGTACCAGGCGCTGAAGATCCA...GAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
||
| CDS-3UTR TCA 90 bp | ACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCCCCTCAGCCTCCTCCAATaGTTTGTACGCGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNSSSCCFTCCGLPWIYPLSLLQ*FVRDLL Trigger: GAGAAGATCGCGTACAAATCATTGGAGGAGGCTGAG...GGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR TCA 90 bp | TCACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCCCTCATTTGCCAGCCTaGGCTTTTCTTCTGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTALLAVSLAVVSRGFIPHLPA*AFLLHG Trigger: TCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGG...GATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR GCA 90 bp | TCACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCCCTGAGCTTTTCTTCTaGATGGATCTTCAGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTALLAVSLAVVSRGFIPELFF*MDLQRL Trigger: CAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGG...GATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | GGCCAGATGACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGGTCTGCATTAAGTTaGTCTCTCTCTTTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GQMTELSLLQGYPALHTGRSALS*SLSFKT Trigger: GGTTTTAAAAGAGAGAGACCAACTTAATGCAGACCT...CCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGTCATCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS-3UTR TCA 90 bp | ACTAACAGCTCTTCTTGCTGTTTCACTTGCTGTGGTCTCCCGTGGATTTATCCCCTTCTGATGGGTCTCTaGAGCTCTCTTCCTTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNSSSCCFTCCGLPWIYPLLMGL*SSLPLD Trigger: ATCTAAAGGAAGAGAGCTTCAGAGACCCATCAGAAG...GGGATAAATCCACGGGAGACCACAGCAAGTGAAACAGCAAGAAGAGCTGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
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| CDS-3UTR GCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTCCTGAGCTTTTCTTCTaGATGGATCTTCAGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSIPELFF*MDLQRL Trigger: CAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGG...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR CCA 90 bp | TCCCGTGGATTTATCCCTCCTCTCATGGCTCTGGCTGTCTCTTGCCACCTCTTTAGGTCTGCATTAAGTTaGTCTCTCTCTTTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SRGFIPPLMALAVSCHLFRSALS*SLSFKT Trigger: GGTTTTAAAAGAGAGAGACCAACTTAATGCAGACCT...AAAGAGGTGGCAAGAGACAGCCAGAGCCATGAGAGGAGGGATAAATCCACGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTAGCTTTTCTTCTGCATaGATCTTCAGCGCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSISFSSA*IFSAWY Trigger: GTACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCT...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR TCA 90 bp | TTTGTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTGCCTTCCCAAATATTTTGTGTTaGGGTCCTCATACTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FVFCSRVISSEWFCICAFPNILC*GPHTCF Trigger: AAAGCAAGTATGAGGACCTCAACACAAAATATTTGG...GAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR GCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTCATGGAGTTCAGGTCTaGATTAAGTTGGTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSIHGVQV*IKLVSL Trigger: GAGAGAGACCAACTTAATGCAGACCTGAACTCCATG...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTAGCGCCTGGTACCTCTaGCCTTCTTTTTCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSISAWYL*PSFSIF Trigger: GAAAATTGAAAAAGAAGGCCAGAGGTACCAGGCGCT...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR TCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTGCTTCTCAAACCGTTTaGAAAGGTCAGAAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSIASQTV*KGQKRT Trigger: AGTCCTTTTCTGACCTTTTCAAACGGTTTGAGAAGC...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR TCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTAACATACTTCTTCAGTaGCTCTTCATTCTTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSINILLQ*LFILLV Trigger: TACCAGAAGAATGAAGAGTCACTGAAGAAGTATGTT...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTAGGTCTGCATTAAGTTaGTCTCTCTCTTTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IFSILEMRSSQIRVSSSIRSALS*SLSFKT Trigger: GGTTTTAAAAGAGAGAGACCAACTTAATGCAGACCT...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
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| CDS GCA 90 bp | ATCTCCAGCGAGTGGTTCTGCATTTGTGCCTTCCTCAGGCTTGCCTaGAAAGCCAGTACCTCTGCTTGGGCCTTGCTGTGTACCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISSEWFCICAFLRLA*KASTSAWALLCTWA Trigger: CGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
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| CDS-3UTR CAA 90 bp | CTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACCTCTGCTTGGGCCTaGCTGTGTACCTGGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LYYRATQLCTQGAHRWLTTSAWA*LCTWAI Trigger: GATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGT...AGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CAA 90 bp | TTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGTGCCTTCCTCAGGCTaGCCTGCAAAGCCAGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LQGYPALHTGSPQVAYYTVPSSG*PAKPVP Trigger: AGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCAC...AGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS-3UTR CAA 90 bp | GAGTTTGAGGAGTGGGCAGAAGAGGTGGAAGGCTCCAAAGGTGTGGGGGACCCTCGAGTGGTTCTGCATTaGTGCCTTCCTCAGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EFEEWAEEVEGSKGVGDPRVVLH*CLPQAC Trigger: GCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCG...AGGGTCCCCCACACCTTTGGAGCCTTCCACCTCTTCTGCCCACTCCTCAAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
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| CDS GCA 90 bp | CTGCATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTaGTTGGGCCTTGCTGTGTACCTGGGCGATCTCCTCATTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHLCLPQACLQSQYL*LGLAVYLGDLLICQ Trigger: CTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
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| CDS CCA 90 bp | ATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTTaGGCCTTGCTGTGTACCTGGGCGATCTCCTCATTTGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ICAFLRLACKASTSA*ALLCTWAISSFASL Trigger: CAGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGCCTTCCTCAGGCTaGCCTGCAAAGCCAGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: TELSLLQGYPALHTGSPQVPSSG*PAKPVP Trigger: AGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCAC...CTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS-3UTR CAA 90 bp | CTTAGCCCCCGAGCTCAGCCCAGGAGGCTATTGATACCAGGAGAGTTTGAGGAGCGAGTGGTTCTGCATTaGTGCCTTCCTCAGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPRAQPRRLLIPGEFEERVVLH*CLPQAC Trigger: GCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCG...CTCCTCAAACTCTCCTGGTATCAATAGCCTCCTGGGCTGAGCTCGGGGGCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000139888.5 |
||
| CDS TCA 90 bp | ATAGGAGGGGTCACCAGCTCACTTTCTAAGACAGGTTCTAGTCCCTaGTGGGAAGGCTCCAGCACTGGCTCAATAGGAGGGGTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGGVTSSLSKTGSSP*WEGSSTGSIGGVTS Trigger: GCTGGTGACCCCTCCTATTGAGCCAGTGCTGGAGCCTTCCCATCAGGGACTAGAACCTGTCTTAGAAAGTGAGCTGGTGACCCCTCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000201633.2 |
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| CDS GCA 90 bp | TGTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTaGCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLLLQSHLQRVVLHL*LPQACLQSQYLCLG Trigger: GCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
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| CDS GCA 90 bp | AACCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTaGCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLLLQSHLQRVVLHL*LPQACLQSQYLCLG Trigger: GCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139888.5 |
||
| CDS CCA 90 bp | CTTGCCTGCAAAGCCAGTACCTCTGCTTGGGCCTTGCTGTGTACCTaGGCGATCTCCTCATTTGCCAGCCTGAGCTTTTCTTCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LACKASTSAWALLCT*AISSFASLSFSSAW Trigger: CCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS-3UTR CAA 90 bp | GCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGTTGAGGTCCTCATACTaGCTTTTCAGCTCCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATQLCTQGAHRWLTTLGVLRSSY*LFSSKF Trigger: GAACTTGGAGCTGAAAAGCAAGTATGAGGACCTCAA...CACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
||
| CDS-3UTR CAA 90 bp | CTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGGGGGTGAGGGGTGGGGCTCATCAATTTCTTTaGTCTTCTGCTCCAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCTQGAHRWLTTLGVRGGAHQFL*SSAPES Trigger: TGACTCTGGAGCAGAAGACAAAAGAAATTGATGAGC...CCCACCCCTCACCCCCAGTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
||
| CDS GCA 90 bp | TACCTCTGCTTGGGCCTTGCTGTGTACCTGGGCGATCTCCTCATTTaGCAGCCTGAGCTTTTCTTCTGCATGGATCTTCAGCGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YLCLGLAVYLGDLLI*QPELFFCMDLQRLV Trigger: TACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CCA 90 bp | TTAGGACTTAAGATCCTGTGTGTCTGTGGATCCCGAGGTGGTGTCTaGAACGTCACATTTGTGGCCTTAGCCTGGCTCTGGGGTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: LGLKILCVCGSRGGV*NVTFVALAWLWGGT Trigger: TGTACCACCCCAGAGCCAGGCTAAGGCCACAAATGTGACGTTCCAGACACCACCTCGGGATCCACAGACACACAGGATCTTAAGTCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS GCA 90 bp | GTGTACCTGGGCGATCTCCTCATTTGCCAGCCTGAGCTTTTCTTCTaGATGGATCTTCAGCGCCTGGTACCTCTGGCCTTCTTTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VYLGDLLICQPELFF*MDLQRLVPLAFFFN Trigger: ATTGAAAAAGAAGGCCAGAGGTACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCCCAGGTACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS GCA 90 bp | AAGAACATAACCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTaGATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KNITFCSRVISSEWF*ICAFLRLACKASTS Trigger: AGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGGTTATGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139888.5 |
||
| CDS CCA 90 bp | GGATCCCGAGGTGGTGTCTGGAACGTCACATTTGTGGCCTTAGCCTaGCTCTGGGGTGGTACATTTTCTTTCTGTGACAGACAAAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GSRGGVWNVTFVALA*LWGGTFSFCDRQRT Trigger: TGTTCTTTGTCTGTCACAGAAAGAAAATGTACCACCCCAGAGCCAGGCTAAGGCCACAAATGTGACGTTCCAGACACCACCTCGGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS GCA 90 bp | ATTTCTTTTGTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTaGATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISFVFCSRVISSEWF*ICAFLRLACKASTS Trigger: AGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACAAAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS-3UTR CAA 90 bp | ATTACAGGGCTACCCAGCTCTGCACACAGGGAGCCCACAGGTGGCTTACTACACTGTGAACTCTTTTCATaGGGCACGTTTTCGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ITGLPSSAHREPTGGLLHCELFS*GTFSSF Trigger: AAATGACGAAAACGTGCCCAATGAAAAGAGTTCACA...GTGTAGTAAGCCACCTGTGGGCTCCCTGTGTGCAGAGCTGGGTAGCCCTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGATGACAGAGCTGTCTTTATTACAGGGCTACCCAGCTCTGCACACAGGCCCAAGAAATCTAAGTaGACAAGCTCAGCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPDDRAVFITGLPSSAHRPKKSK*TSSASV Trigger: GACAGAAGCTGAGCTTGTCAACTTAGATTTCTTGGG...CCTGTGTGCAGAGCTGGGTAGCCCTGTAATAAAGACAGCTCTGTCATCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079534.11 |
||
| CDS GCA 90 bp | GTGTTGAGGTCCTCATACTTGCTTTTCAGCTCCAAGTTCTCCTGCTaGATCACATTCACCACTGCATCCAGGTCTTTCTGGCTGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRSSYLLFSSKFSC*ITFTTASRSFWLYF Trigger: GAAGTACAGCCAGAAAGACCTGGATGCAGTGGTGAATGTGATGCAGCAGGAGAACTTGGAGCTGAAAAGCAAGTATGAGGACCTCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CCA 90 bp | CGAGGTGGTGTCTGGAACGTCACATTTGTGGCCTTAGCCTGGCTCTaGGGTGGTACATTTTCTTTCTGTGACAGACAAAGAACAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGGVWNVTFVALAWL*GGTFSFCDRQRTDD Trigger: ATCATCTGTTCTTTGTCTGTCACAGAAAGAAAATGTACCACCCCAGAGCCAGGCTAAGGCCACAAATGTGACGTTCCAGACACCACCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS GCA 90 bp | TTTGTGTTGAGGTCCTCATACTTGCTTTTCAGCTCCAAGTTCTCCTaGTGCATCACATTCACCACTGCATCCAGGTCTTTCTGGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FVLRSSYLLFSSKFS*CITFTTASRSFWLY Trigger: GTACAGCCAGAAAGACCTGGATGCAGTGGTGAATGTGATGCAGCAGGAGAACTTGGAGCTGAAAAGCAAGTATGAGGACCTCAACACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCCATCTTAGAGATGAGGTCATCACAGATCCGGGTCAGCTCATCAATTTTGAGGTCCTCATACTaGCTTTTCAGCTCCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFSILEMRSSQIRVSSSILRSSY*LFSSKF Trigger: GAACTTGGAGCTGAAAAGCAAGTATGAGGACCTCAA...AATTGATGAGCTGACCCGGATCTGTGATGACCTCATCTCTAAGATGGAGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138240.5 |
||
| CDS GCA 72 bp | GGCTTGCCTGCAAAGCCAGTACCTCTGCTTGGGCCTTaGTGTGTACCTGGGCGATCTCCTCATTTGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLPAKPVPLLGP*CVPGRSPHLPA Trigger: GGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS GCA 72 bp | TGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTaGTTGGGCCTTGCTGTGTACCTGGGCGATCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CLPQACLQSQYL*LGLAVYLGDLL Trigger: GAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 90 bp | GCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTTGGGCCTaGCTGTGTACCTGGGCGATCTCCTCATTTGCCAGCCTGAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AFLRLACKASTSAWA*LCTWAISSFASLSF Trigger: AAAGCTCAGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 72 bp | AGGCTTGCCTGCAAAGCCAGTACCTCTGCTTGGGCCTaGCTGTGTACCTGGGCGATCTCCTCATTTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLACKASTSAWA*LCTWAISSFAS Trigger: GCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 72 bp | CCAGCGAGTGGTTCTGCATTTGTGCCTTCCTCAGGCTaGCCTGCAAAGCCAGTACCTCTGCTTGGGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PASGSAFVPSSG*PAKPVPLLGPC Trigger: GCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 90 bp | CATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTaGGGCCTTGCTGTGTACCTGGGCGATCTCCTCATTTGCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLCLPQACLQSQYLC*GLAVYLGDLLICQP Trigger: AGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS TCA 72 bp | GTCACCAGCTCACTGTCCAAGACAGGTTCTAGTCCCTaGTGGGAAGGCTCCAGCACTGGCTCAATAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSSLSKTGSSP*WEGSSTGSIGG Trigger: CCCTCCTATTGAGCCAGTGCTGGAGCCTTCCCATCAGGGACTAGAACCTGTCTTGGACAGTGAGCTGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000201633.2 |
||
| CDS CAA 72 bp | CTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTaGGGCCTTGCTGTGTACCTGGGCGATCTCCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LPQACLQSQYLC*GLAVYLGDLLI Trigger: AATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 90 bp | GAGTCATCTCCAGCGAGTGGTTCTGCATTTGTGCCTTCCTCAGGCTaGCCTGCAAAGCCAGTACCTCTGCTTGGGCCTTGCTGTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: ESSPASGSAFVPSSG*PAKPVPLLGPCCVP Trigger: AGGTACACAGCAAGGCCCAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS GCA 72 bp | GGCGATCTCCTCATTTGCCAGCCTGAGCTTTTCTTCTaGATGGATCTTCAGCGCCTGGTACCTCTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GDLLICQPELFF*MDLQRLVPLAF Trigger: GAAGGCCAGAGGTACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
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| CDS GCA 72 bp | CTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTTGTaGCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSHLQRVVLHL*LPQACLQSQYL Trigger: GAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS GCA 72 bp | GTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTaGATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VFCSRVISSEWF*ICAFLRLACKA Trigger: GGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS GCA 72 bp | ACCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTaGATTTGTGCCTTCCTCAGGCTTGCCTGCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFCSRVISSEWF*ICAFLRLACKA Trigger: GGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139888.5 |
||
| CDS CCA 72 bp | AAGATCCTGTGTGTCTGTGGATCCCGAGGTGGTGTCTaGAACGTCACATTTGTGGCCTTAGCCTGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KILCVCGSRGGV*NVTFVALAWLW Trigger: CCAGAGCCAGGCTAAGGCCACAAATGTGACGTTCCAGACACCACCTCGGGATCCACAGACACACAGGATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
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| CDS CCA 72 bp | AGGAAGGAGACCTCGAGGCTCAAGGACACACAGGGGTaGGGCAGATACCGGAACATCCAAATCTCCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RKETSRLKDTQG*GRYRNIQISQE Trigger: TTCTTGGGAGATTTGGATGTTCCGGTATCTGCCCCACCCCTGTGTGTCCTTGAGCCTCGAGGTCTCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CAA 72 bp | CTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTaGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQSHLQRVVLH*CLPQACLQSQY Trigger: GTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
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| CDS TCA 72 bp | GTCACCAGCTCACTTTCTAAGACAGGTTCTAGTCCCTaGTGGGAAGGCTCCAGCACTGGCTCAATAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSSLSKTGSSP*WEGSSTGSIGG Trigger: CCCTCCTATTGAGCCAGTGCTGGAGCCTTCCCATCAGGGACTAGAACCTGTCTTAGAAAGTGAGCTGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000201633.2 |
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| CDS TCA 72 bp | TGCTGTGTACCTGGGCGATCTCCTCATTTGCCAGCCTaGGCTTTTCTTCTGCATGGATCTTCAGCGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CCVPGRSPHLPA*AFLLHGSSAPG Trigger: ACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
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| CDS CAA 90 bp | CATAACCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTaGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HNLLLQSHLQRVVLH*CLPQACLQSQYLCL Trigger: CAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGGTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139888.5 |
||
| CDS TCA 72 bp | AACTCGCCTTCTGCTCTTAGGATCTCAGCTGCCATTTaGACCACAGGTGCATCATCCACTGGGGCTAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NSPSALRISAAI*TTGASSTGAKG Trigger: GCCTTTAGCCCCAGTGGATGATGCACCTGTGGTTCAAATGGCAGCTGAGATCCTAAGAGCAGAAGGCGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000152847.8 |
||
| CDS GCA 72 bp | TTGGGCCTTGCTGTGTACCTGGGCGATCTCCTCATTTaGCAGCCTGAGCTTTTCTTCTGCATGGATCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGLAVYLGDLLI*QPELFFCMDLQ Trigger: CTGAAGATCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGATCGCCCAGGTACACAGCAAGGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 90 bp | TTTTGTCTTCTGCTCCAGAGTCATCTCCAGCGAGTGGTTCTGCATTaGTGCCTTCCTCAGGCTTGCCTGCAAAGCCAGTACCTCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FCLLLQSHLQRVVLH*CLPQACLQSQYLCL Trigger: CAAGCAGAGGTACTGGCTTTGCAGGCAAGCCTGAGGAAGGCACAAATGCAGAACCACTCGCTGGAGATGACTCTGGAGCAGAAGACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CAA 90 bp | GGGTCACCAGCTCACTGTCCAGAAGACTTGTGGAAGCTGAAAGGCTaGAGGAAGTCAAGATTCCCTCCTGTAACTCGCCTTCTGCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GSPAHCPEDLWKLKG*RKSRFPPVTRLLLL Trigger: TAAGAGCAGAAGGCGAGTTACAGGAGGGAATCTTGACTTCCTCAAGCCTTTCAGCTTCCACAAGTCTTCTGGACAGTGAGCTGGTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000201633.2 |
||
| CDS CAA 90 bp | GGTGGGGCAGATACCGGAACATCCAAATCTCCCAAGAAATCTAAGTaGACAAGCTCAGCTTCTGTCGGCTTTCCAGAACCAGACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGADTGTSKSPKKSK*TSSASVGFPEPDSS Trigger: GGAGGAGTCTGGTTCTGGAAAGCCGACAGAAGCTGAGCTTGTCAACTTAGATTTCTTGGGAGATTTGGATGTTCCGGTATCTGCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CCA 72 bp | GGTGGTGTCTGGAACGTCACATTTGTGGCCTTAGCCTaGCTCTGGGGTGGTACATTTTCTTTCTGTGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GGVWNVTFVALA*LWGGTFSFCDR Trigger: TCTGTCACAGAAAGAAAATGTACCACCCCAGAGCCAGGCTAAGGCCACAAATGTGACGTTCCAGACACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CCA 72 bp | ATCTCCTCATTTGCCAGCCTGAGCTTTTCTTCTGCATaGATCTTCAGCGCCTGGTACCTCTGGCCTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISSFASLSFSSA*IFSAWYLWPSF Trigger: AAAAGAAGGCCAGAGGTACCAGGCGCTGAAGATCCATGCAGAAGAAAAGCTCAGGCTGGCAAATGAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000139888.5 |
||
| CDS CAA 72 bp | GCTCACTGTCCAGAAGACTTGTGGAAGCTGAAAGGCTaGAGGAAGTCAAGATTCCCTCCTGTAACTCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AHCPEDLWKLKG*RKSRFPPVTRL Trigger: AAGGCGAGTTACAGGAGGGAATCTTGACTTCCTCAAGCCTTTCAGCTTCCACAAGTCTTCTGGACAGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000201633.2 |
||
| CDS TCA 72 bp | CTTCAGCACCAGTACCTAGGACTTCTGATGGGTCTCTaGAGCTCTCTTCCTTTAGATCCACGACAGGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LQHQYLGLLMGL*SSLPLDPRQVL Trigger: TAGAACCTGTCGTGGATCTAAAGGAAGAGAGCTTCAGAGACCCATCAGAAGTCCTAGGTACTGGTGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS GCA 72 bp | TCCTCATACTTGCTTTTCAGCTCCAAGTTCTCCTGCTaGATCACATTCACCACTGCATCCAGGTCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSYLLFSSKFSC*ITFTTASRSFW Trigger: CCAGAAAGACCTGGATGCAGTGGTGAATGTGATGCAGCAGGAGAACTTGGAGCTGAAAAGCAAGTATGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS GCA 72 bp | AGGTCCTCATACTTGCTTTTCAGCTCCAAGTTCTCCTaGTGCATCACATTCACCACTGCATCCAGGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSYLLFSSKFS*CITFTTASRSF Trigger: GAAAGACCTGGATGCAGTGGTGAATGTGATGCAGCAGGAGAACTTGGAGCTGAAAAGCAAGTATGAGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CCA 72 bp | GTCTGGAACGTCACATTTGTGGCCTTAGCCTGGCTCTaGGGTGGTACATTTTCTTTCTGTGACAGACAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VWNVTFVALAWL*GGTFSFCDRQR Trigger: TCTTTGTCTGTCACAGAAAGAAAATGTACCACCCCAGAGCCAGGCTAAGGCCACAAATGTGACGTTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
||
| CDS CCA 72 bp | ACCACAGGTGCATCATCCACTGGGGCTAAAGGCCGCTaGTTTTCTTTCTGTAAGAAGACACAGTGGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: TTGASSTGAKGR*FSFCKKTQWSF Trigger: AAATGACCACTGTGTCTTCTTACAGAAAGAAAACCAGCGGCCTTTAGCCCCAGTGGATGATGCACCTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000152847.8 |
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| CDS CAA 90 bp | GCTATTTCCTTTAGTTCCCTCTGTTTCTCAGCCTCCTCCAATGATTaGTACGCGATCTTCTCAAACTCATCAACGGACTTCCCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: AISFSSLCFSASSND*YAIFSNSSTDFPIS Trigger: GGAGATGGGGAAGTCCGTTGATGAGTTTGAGAAGATCGCGTACAAATCATTGGAGGAGGCTGAGAAACAGAGGGAACTAAAGGAAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000138240.5 ENSMUST00000139888.5 |
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| CDS TCA 72 bp | ATACCGGAACATCCAAATCTCCCAAGAAATCTAAGTTaGCAAGCTCAGCTTCTGTCGGCTTTCCAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: IPEHPNLPRNLS*QAQLLSAFQNQ Trigger: CTGGTTCTGGAAAGCCGACAGAAGCTGAGCTTGTCAACTTAGATTTCTTGGGAGATTTGGATGTTCCGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
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| CDS GCA 72 bp | TCTTTCAGAAGAGGGTCAAATTTCACGTACAAAGACTaGTTCCTCCAGGCCGACTCCTTAAACGAGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SFRRGSNFTYKD*FLQADSLNEEV Trigger: AACTTCCTCGTTTAAGGAGTCGGCCTGGAGGAAGCAGTCTTTGTACGTGAAATTTGACCCTCTTCTGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079534.11 ENSMUST00000114426.10 |
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| CDS CAA 90 bp | AAGACACAGTGGTCATTTTGTAATCCAAAAGGAGCCTCACGCTTATaGGTCATGTTAGGACTTAAGATCCTGTGTGTCTGTGGATCCCGA | + |
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Preference number: 6 (lower is better) Translates to: KTQWSFCNPKGASRL*VMLGLKILCVCGSR Trigger: TCGGGATCCACAGACACACAGGATCTTAAGTCCTAACATGACCAATAAGCGTGAGGCTCCTTTTGGATTACAAAATGACCACTGTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
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| CDS CAA 72 bp | CCCATCTCCAAATATTTTGTGTTGAGGTCCTCATACTaGCTTTTCAGCTCCAAGTTCTCCTGCTGCATCACA | + |
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Preference number: 6 (lower is better) Translates to: PISKYFVLRSSY*LFSSKFSCCIT Trigger: TGTGATGCAGCAGGAGAACTTGGAGCTGAAAAGCAAGTATGAGGACCTCAACACAAAATATTTGGAGATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000138240.5 |
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| CDS CAA 72 bp | TTTAGTTCCCTCTGTTTCTCAGCCTCCTCCAATGATTaGTACGCGATCTTCTCAAACTCATCAACGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: FSSLCFSASSND*YAIFSNSSTDF Trigger: GAAGTCCGTTGATGAGTTTGAGAAGATCGCGTACAAATCATTGGAGGAGGCTGAGAAACAGAGGGAACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000138240.5 ENSMUST00000139888.5 |
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| CDS CAA 72 bp | TGGTCATTTTGTAATCCAAAAGGAGCCTCACGCTTATaGGTCATGTTAGGACTTAAGATCCTGTGTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: WSFCNPKGASRL*VMLGLKILCVC Trigger: ACAGACACACAGGATCTTAAGTCCTAACATGACCAATAAGCGTGAGGCTCCTTTTGGATTACAAAATGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 |
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| CDS TCA 72 bp | AATTTTCACTATGCATTCCCCAACATACTTCTTCAGTaGCTCTTCATTCTTCTGGTAGCCTTCAATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: NFHYAFPNILLQ*LFILLVAFNHF Trigger: GAAGTGATTGAAGGCTACCAGAAGAATGAAGAGTCACTGAAGAAGTATGTTGGGGAATGCATAGTGAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000074849.13 ENSMUST00000079534.11 ENSMUST00000114426.10 ENSMUST00000138240.5 ENSMUST00000139888.5 |
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