RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TACC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030852

Ensembl transcript IDs: ENSMUST00000033141.7, ENSMUST00000059145.14, ENSMUST00000084513.12, ENSMUST00000207282.2, ENSMUST00000207376.2, ENSMUST00000207395.2, ENSMUST00000207549.2, ENSMUST00000207789.2, ENSMUST00000207918.2, ENSMUST00000208722.2, ENSMUST00000208743.2, ENSMUST00000209108.2, ENSMUST00000215492.2, ENSMUST00000239258.2

Found 1534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACCTGGAGTGCAGAGTCCAGGTCTGGCTGCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGTGGACCCGATGCGGGAGTACAAGGC +
Preference number: 1 (lower is better)
Translates to: NLECRVQVWLLEQKA*GFLHLGGPDAGVQG
Trigger: GCCTTGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp ACCTCTGCTCTGGCAACCTGGAGTGCAGAGTCCAGGTCTGGCTGCTaGAACAGAAGGCCTGGGGGTTTCTCCACCTCGGTGGACCCGATG +
Preference number: 1 (lower is better)
Translates to: TSALATWSAESRSGC*NRRPGGFSTSVDPM
Trigger: CATCGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp GGCGATGACCTCTGCTCTGGCAACCTGGAGTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCCTGGGGGTTTCTCCACCTCGGTGGA +
Preference number: 1 (lower is better)
Translates to: GDDLCSGNLECRVQV*LLEQKAWGFLHLGG
Trigger: TCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGAGGTCATCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 90 bp GGAGACATCTGGTGGGTGAGCAGCTTCCCTGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCATGGCCTCCAGCTCCTTCTGGGAGGG +
Preference number: 1 (lower is better)
Translates to: GDIWWVSSFPDFNCF*WGAQGHGLQLLLGG
Trigger: CCCTCCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp GTCCACTTCTGGCTAGTGACTGCCAGCTTCTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCTGAGGGTGCTTCCGGCGTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: VHFWLVTASFSSSVA*TTVEMAEGASGVAA
Trigger: AGCTGCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTGGTCCACGCCACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 90 bp GACTTCTCTCTCCTTGGCGATGACCTCTGCTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTGCTGGAACAGAAGGCCTGGGGGTTT +
Preference number: 1 (lower is better)
Translates to: DFSLLGDDLCSGNLE*RVQVWLLEQKAWGF
Trigger: AAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGAGGTCATCGCCAAGGAGAGAGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp GGTCTGGCTGCTGGAACAGAAGGCCTGGGGGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACAAGGCAGTTTTGGAGATGGAGACAT +
Preference number: 1 (lower is better)
Translates to: GLAAGTEGLGVSPPR*TRCGSTRQFWRWRH
Trigger: ATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 90 bp GCTGTGGTAAGAGGCACTGATTTCCTCCCAACTGGGGGTGAGTTCTaGACTCTGCCACCTCCAGAAACCAGGGGGCTAACGTCTTCTGCA +
Preference number: 1 (lower is better)
Translates to: AVVRGTDFLPTGGEF*TLPPPETRGLTSSA
Trigger: TGCAGAAGACGTTAGCCCCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTaGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCAC +
Preference number: 1 (lower is better)
Translates to: LSRRSYCTQRPSPRT*PRVSFFPSWRSARH
Trigger: GTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR TCA 90 bp GGGGAATCTGACATCCGGACTGGAGGAGACTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTG +
Preference number: 1 (lower is better)
Translates to: GESDIRTGGDLTGLS*GVSNIRYKACFFGV
Trigger: CACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCCGGATGTCAGATTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 90 bp AGCATCCAAGTCCACCGTCATACACGTCCACTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGTGGCGTGGACCACTGTAGAGATGGC +
Preference number: 1 (lower is better)
Translates to: SIQVHRHTRPLLASD*QLLLICGVDHCRDG
Trigger: GCCATCTCTACAGTGGTCCACGCCACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATGACGGTGGACTTGGATGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp CCCGATGCGGGAGTACAAGGCAGTTTTGGAGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTGATTTCAATTGCTTCTGCTGGGGTGCC +
Preference number: 1 (lower is better)
Translates to: PDAGVQGSFGDGDIW*VSSFPDFNCFCWGA
Trigger: GGCACCCCAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR TCA 90 bp GAAGTGAAAGGAGACGCTGTTCACGGAATCGGAAGGACAAACAGTTaGGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTT +
Preference number: 1 (lower is better)
Translates to: EVKGDAVHGIGRTNS*ADARIARNGQVHAL
Trigger: AAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACAGCGTCTCCTTTCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR CCA 90 bp TCCTGTTTGTCAGCATCCAAGTCCACCGTCATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTCTCCTCATCTGTGGCGTGGACCACT +
Preference number: 1 (lower is better)
Translates to: SCLSASKSTVIHVHF*LVTASFSSSVAWTT
Trigger: AGTGGTCCACGCCACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATGACGGTGGACTTGGATGCTGACAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp GGACCCGATGCGGGAGTACAAGGCAGTTTTGGAGATGGAGACATCTaGTGGGTGAGCAGCTTCCCTGATTTCAATTGCTTCTGCTGGGGT +
Preference number: 1 (lower is better)
Translates to: GPDAGVQGSFGDGDI*WVSSFPDFNCFCWG
Trigger: ACCCCAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp GCCAGGGCTTGCTCCTTCTCCAGGACCAGCTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTCTGTTCGTCCTCGATCATCTGTGCA +
Preference number: 1 (lower is better)
Translates to: ARACSFSRTSCCTVW*EMDFSLCSSSIICA
Trigger: TGCACAGATGATCGAGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCAAGCCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR TCA 90 bp TTCCACCACTTCCCGTCGGCTTTCTTCATATTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGCGATGACCTCTGCTCTGGCAACCTG +
Preference number: 1 (lower is better)
Translates to: FHHFPSAFFIFIPPL*DFSLLGDDLCSGNL
Trigger: CAGGTTGCCAGAGCAGAGGTCATCGCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAATATGAAGAAAGCCGACGGGAAGTGGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp CTTGCTCCTTCTCCAGGACCAGCTGCTGTACAGTTTGGTGGGAGATaGATTTTTCTCTCTGTTCGTCCTCGATCATCTGTGCAATGGTCT +
Preference number: 1 (lower is better)
Translates to: LAPSPGPAAVQFGGR*IFLSVRPRSSVQWS
Trigger: AGACCATTGCACAGATGATCGAGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 90 bp AGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATaGATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAG +
Preference number: 1 (lower is better)
Translates to: SKCGSIVHSLRQESR*ICSRPIRCCSPKAK
Trigger: CTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR GCA 90 bp CCAGAAATCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTaGCCTTCTCTTTCTAGAACAGTTCTTGGGTCAACTGACCAGCAG +
Preference number: 1 (lower is better)
Translates to: PEITRSYSSRHMAMV*PSLSRTVLGSTDQQ
Trigger: CTGCTGGTCAGTTGACCCAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGATTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR TCA 90 bp GAATTGAATTTGGTCTCATTTACAAAGTTAGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCAGCATCCAAGTCCACCGTCATACAC +
Preference number: 1 (lower is better)
Translates to: ELNLVSFTKLDRSEG*GKSCLSASKSTVIH
Trigger: GTGTATGACGGTGGACTTGGATGCTGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTCTAACTTTGTAAATGAGACCAAATTCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 90 bp TCAAGGGACTCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCTTGCATTTTTGAGGTGGAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: SRDSSQASGSKLYDC*DSLGDSCIFEVEEK
Trigger: TTTTTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 90 bp AGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTaGATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGT +
Preference number: 1 (lower is better)
Translates to: RKCKRIARNPGRSRH*IRSNQPYLERGHSS
Trigger: ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR GCA 90 bp ATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATaGAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTGCATA +
Preference number: 1 (lower is better)
Translates to: IQELRGQLAMNYTRK*KRIARNPGRSRHCI
Trigger: TATGCAGTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCCGTCCCATCAGATGCTaGTCGCCAAAGGCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPRPIRC*SPKAKA
Trigger: GGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACG...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 2 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 2 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR GCA 90 bp CACTCGAAGCTGCTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGCGTCCCATCAGATGCTaGTCGCCAAAGGCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: HSKLLLPQASLVGCLLLLRPIRC*SPKAKA
Trigger: GGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACG...CAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR CCA 90 bp GCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: ARNGQVHALGPELAFSHLGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...AAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: SSVLSRASTRSCSFRRLAPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR TCA 90 bp AGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: SPRTWPRVSFFPSWRSARHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...ACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGGTGAGCAGCTTCCCTaGTTTCAATTGCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPGEQLP*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CAA 90 bp GCTCCTGACTGGAGGGCAGACCTCTTGCGACTGGATGCTGGAGCTTaGTTGCTGCATTCACAAGGGCTTCGGTGTCCTCAAAACTCGACC +
Preference number: 2 (lower is better)
Translates to: APDWRADLLRLDAGA*LLHSQGLRCPQNST
Trigger: GGTCGAGTTTTGAGGACACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTGCCCTCCAGTCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp GCTCTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 2 (lower is better)
Translates to: ALLRSVKHKVQGLLLRSVAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...GACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp CACTCGAAGCTGCTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 2 (lower is better)
Translates to: HSKLLLPQASLVGCLLLLLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...CAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp CTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCATCAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: LLRSVKHKVQGLLLRSVIRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...GATGACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CAA 90 bp GGAAGTGAAAGGAGACGCTGTTCACGGAATCGGAAGGACAAACAGTaGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACT +
Preference number: 2 (lower is better)
Translates to: GSERRRCSRNRKDKQ*SRRSYCTQRPSPRT
Trigger: AGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACAGCGTCTCCTTTCACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 2 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR TCA 90 bp CTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCATCGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: LLRSVKHKVQGLLLRSVIDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GATGACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp TTTATTCTTCTGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: FILLLQRSFQSIHSKLLLPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp TTTATTCTTCTGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: FILLLQRSFQSIHSKLLLSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp TTTATTCTTCTGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: FILLLQRSFQSIHSKLLLASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR GCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR-3UTR CCA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTAAGTCAGAGGACAGGTaGCTGTGGGGACAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: FPILAISSSQILVSSSISKSEDR*LWGQQG
Trigger: CCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTT...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp TTTTCTCTCTGTTCGTCCTCGATCATCTGTGCAATGGTCTTCTCATATTCGGCCTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: FSLCSSSIICAMVFSYSACRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...GGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAACAGAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp GTTCGTCCTCGATCATCTGTGCAATGGTCTTCTCATATTCGGCCACAATTTTCCGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: VRPRSSVQWSSHIRPQFSGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...GGAAAATTGTGGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp GTTCGTCCTCGATCATCTGTGCAATGGTCTTCTCATATTCGGCCACAATTTTCCCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: VRPRSSVQWSSHIRPQFSHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...GGAAAATTGTGGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CAA 90 bp GCCTTAAAGGGGTCAAGGGACTCTTCACAGGCGTCAGGGTCAAAGTaGTACGATTGTTGGGACAGTTTGGGAGACTCTTGCATTTTTGAG +
Preference number: 2 (lower is better)
Translates to: ALKGSRDSSQASGSK*YDCWDSLGDSCIFE
Trigger: CTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCCCTTTAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CAA 90 bp TTCTTCACCCTAAACGTGTCAGTCTTTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCATCCCCATCCGCTTCCGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: FFTLNVSVFSGVFFF*AGLFNPSPSASVVL
Trigger: CAGCACCACGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACTGACACGTTTAGGGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: FPILAISSSQILVSSSISSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR TCA 90 bp TTTTCTCTCTGTTCGTCCTCGATCATCTGTGCAATGGTCTTCTCATATTCGGCCTTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: FSLCSSSIICAMVFSYSAFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...GGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAACAGAGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp GCTCTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: ALLRSVKHKVQGLLLRSVSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...GACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp CTCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTGGGACAGTTTGGGAGACTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: LFTGVRVKVVRLLGQFGRLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...TCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp AGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 2 (lower is better)
Translates to: SPRTWPRVSFFPSWRSARIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...ACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp GCTCTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 2 (lower is better)
Translates to: ALLRSVKHKVQGLLLRSVKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...GACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp TCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTTCTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: SHLGDQLVTNLGEFFYLFLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...AAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGGTCGCCATATGGCAATaGTTTGCCCTTCTCTTTCTA +
Preference number: 2 (lower is better)
Translates to: LGFAALCLVSMVTALNNQVAIWQ*FALLFL
Trigger: TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGAC...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR-3UTR GCA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 2 (lower is better)
Translates to: FPILAISSSQILVSSSISIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CCA 90 bp CCTGAGGTAAGGAGGAGCCAAGCTTTTCCATGTATTCAATTTCATAGGAGTTTCTGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 2 (lower is better)
Translates to: PEVRRSQAFPCIQFHRSFCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...GAAACTCCTATGAAATTGAATACATGGAAAAGCTTGGCTCCTCCTTACCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CAA 90 bp TCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTGGGACAGTTaGGGAGACTCTTGCATTTTTGAGGTGGAGGAAAAAGGGTTAAAA +
Preference number: 2 (lower is better)
Translates to: SSQASGSKLYDCWDS*GDSCIFEVEEKGLK
Trigger: TTTTAACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR GCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGCATATGGCAATGGTTTaGCCTTCTCTTTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: LGFAALCLVSMVTALNNQHMAMV*PSLSRT
Trigger: TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATG...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR-3UTR CCA 90 bp GGGTCAAAGTTGTACGATTGTTGGGACAGTTTGGGAGACTCTTGCATTTTTGAGGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 2 (lower is better)
Translates to: GSKLYDCWDSLGDSCIFEGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...CTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp AGCCTCACTGACAACCCCTTGGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGGGTCACCTCCACCGCC +
Preference number: 3 (lower is better)
Translates to: SLTDNPLAGKSS*PPLSDRVTSTA
Trigger: GGCGGTGGAGGTGACCCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp AGATGGCTGAGGGTGCTTCCGGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGTCAGACAGAGGAGACC +
Preference number: 3 (lower is better)
Translates to: RWLRVLPAWQLE*GPEKAGQTEET
Trigger: GGTCTCCTCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCTCAGCCATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp TGCAGAGTCCAGGTCTGGCTGCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGTGGACCCGATGCGGGA +
Preference number: 3 (lower is better)
Translates to: CRVQVWLLEQKA*GFLHLGGPDAG
Trigger: TCCCGCATCGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp CTCTGCTCTGGCAACCTGGAGTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCCTGGGGGTTTCTCCAC +
Preference number: 3 (lower is better)
Translates to: LCSGNLECRVQV*LLEQKAWGFLH
Trigger: GTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp GCTGGAACAGAAGGCCTGGGGGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACAAGGCAGTTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: AGTEGLGVSPPR*TRCGSTRQFWR
Trigger: TCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp AGAGGCACTGATTTCCTCCCAACTGGGGGTGAGTTCTaGACTCTGCCACCTCCAGAAACCAGGGGGCTAACG +
Preference number: 3 (lower is better)
Translates to: RGTDFLPTGGEF*TLPPPETRGLT
Trigger: CGTTAGCCCCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGGAAATCAGTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp TGGTGGGTGAGCAGCTTCCCTGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCATGGCCTCCAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: WWVSSFPDFNCF*WGAQGHGLQLL
Trigger: AAGGAGCTGGAGGCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp GAGAGGCTCCTGACTGGAGGGCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGCTGCATTCACAAGGGC +
Preference number: 3 (lower is better)
Translates to: ERLLTGGQTSCD*MLELCCCIHKG
Trigger: GCCCTTGTGAATGCAGCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp TCTCTCTCCTTGGCGATGACCTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCTGGCTGCTGGAACAGA +
Preference number: 3 (lower is better)
Translates to: SLSLAMTSALAT*SAESRSGCWNR
Trigger: TCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGAGGTCATCGCCAAGGAGAGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp CACTCGAAGCTGCTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGTGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 3 (lower is better)
Translates to: HSKLLLPQASLVGCLLLLWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...CAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR TCA 72 bp GGAGACGCTGTTCACGGAATCGGAAGGACAAACAGTTaGGCCGACGCTCGTATTGCACGCAACGGCCAAGTC +
Preference number: 3 (lower is better)
Translates to: GDAVHGIGRTNS*ADARIARNGQV
Trigger: GACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACAGCGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR GCA 72 bp GTCCACCGTCATACACGTCCACTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGTGGCGTGGACCACTGT +
Preference number: 3 (lower is better)
Translates to: VHRHTRPLLASD*QLLLICGVDHC
Trigger: ACAGTGGTCCACGCCACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATGACGGTGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp CTGCAAGAGAGGCTCCTGACTGGAGGGCAGACCTCTTaGGACTGGATGCTGGAGCTTTGTTGCTGCATTCAC +
Preference number: 3 (lower is better)
Translates to: LQERLLTGGQTS*DWMLELCCCIH
Trigger: GTGAATGCAGCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp GGGGTCAAGGGACTCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTGGGACTCACTGACAACCCCTaGGCAGGCAAGTCCTCTTGC +
Preference number: 3 (lower is better)
Translates to: GVKGLFTGVRVKVVRLLGLTDNP*AGKSSC
Trigger: GCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAG...TCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR TCA 72 bp GACATCCGGACTGGAGGAGACTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGGTACAAGGCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: DIRTGGDLTGLS*GVSNIRYKACF
Trigger: GAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCCGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp CAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATaGTGCTCGCCAAAGGCCAAGGCCAAGGCCAGCAAT +
Preference number: 3 (lower is better)
Translates to: QESRCICSRPIR*CSPKAKAKASN
Trigger: ATTGCTGGCCTTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGGGACTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR CCA 72 bp TATCGTCTGACAAGGTGCAACCAGCGCCCTCAGGTGTaGCCGACTCCGTCTTTGTCTCTGGTGCTAAGTGTT +
Preference number: 3 (lower is better)
Translates to: YRLTRCNQRPQV*PTPSLSLVLSV
Trigger: AACACTTAGCACCAGAGACAAAGACGGAGTCGGCCACACCTGAGGGCGCTGGTTGCACCTTGTCAGACGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp CAACCAGCGCCCTCAGGTGTGGCCGACTCCGTCTTTGTCTCTGGTGCTAAGTGTGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: QPAPSGVADSVFVSGAKCGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...ACACTTAGCACCAGAGACAAAGACGGAGTCGGCCACACCTGAGGGCGCTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAAGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 3 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp CAGGTCCGAGGGCTGAGGGAAGTCCTGTTTGTCAGCATCCAAGTCCACCGTCATGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 3 (lower is better)
Translates to: QVRGLREVLFVSIQVHRHGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...ATGACGGTGGACTTGGATGCTGACAAACAGGACTTCCCTCAGCCCTCGGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp TTGCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 3 (lower is better)
Translates to: LPRTWAISALALSSFSSAEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...CGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 3 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp CAGGTCCGAGGGCTGAGGGAAGTCCTGTTTGTCAGCATCCAAGTCCACCGTCATGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 3 (lower is better)
Translates to: QVRGLREVLFVSIQVHRHETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...ATGACGGTGGACTTGGATGCTGACAAACAGGACTTCCCTCAGCCCTCGGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp GCATCCAAGTCCACCGTCATACACGTCCACTTCTGGCTAGTGACTGCCAGCTTCAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 3 (lower is better)
Translates to: ASKSTVIHVHFWLVTASFKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATGACGGTGGACTTGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR CCA 72 bp TGCTCCTTCTCCAGGACCAGCTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTCTGTTCGTCCTCGATC +
Preference number: 3 (lower is better)
Translates to: CSFSRTSCCTVW*EMDFSLCSSSI
Trigger: GATCGAGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR TCA 72 bp TTGGTCTCATTTACAAAGTTAGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCAGCATCCAAGTCCACC +
Preference number: 3 (lower is better)
Translates to: LVSFTKLDRSEG*GKSCLSASKST
Trigger: GGTGGACTTGGATGCTGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTCTAACTTTGTAAATGAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR TCA 72 bp TACAAGGCAGTTTTGGAGATGGAGACATCTGGTGGGTaGGCAGCTTCCCTGATTTCAATTGCTTCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YKAVLEMETSGG*AASLISIASAG
Trigger: CCCAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp GGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATaGATATGTTCACGTCCCATCAGATGCTGCTCGCCA +
Preference number: 3 (lower is better)
Translates to: GSIVHSLRQESR*ICSRPIRCCSP
Trigger: TGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
3UTR CCA 72 bp TCTCCAGGACCAGCTGCTGTACAGTTTGGTGGGAGATaGATTTTTCTCTCTGTTCGTCCTCGATCATCTGTG +
Preference number: 3 (lower is better)
Translates to: SPGPAAVQFGGR*IFLSVRPRSSV
Trigger: CACAGATGATCGAGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp GCTCTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: ALLRSVKHKVQGLLLRSVVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...GACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp TGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTaGTTTGAACAATCAGCAGAGTCCAGAAATCACTCG +
Preference number: 3 (lower is better)
Translates to: WLCSSVSCLHGD*FEQSAESRNHS
Trigger: CGAGTGATTTCTGGACTCTGCTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR CCA 72 bp TCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCTTGCATTTTTGAGGTG +
Preference number: 3 (lower is better)
Translates to: SSQASGSKLYDC*DSLGDSCIFEV
Trigger: CACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR GCA 72 bp ACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTaGCCTTCTCTTTCTAGAACAGTTCTTGGGTCAACT +
Preference number: 3 (lower is better)
Translates to: TRSYSSRHMAMV*PSLSRTVLGST
Trigger: AGTTGACCCAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR TCA 72 bp CCCAACAGCAAACCCGTAATGGTACTCAGTAATCAATaGATGAACAAATGCTTGGCTTTGCAGCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: PNSKPVMVLSNQ*MNKCLALQLCV
Trigger: GACACAGAGCTGCAAAGCCAAGCATTTGTTCATTCATTGATTACTGAGTACCATTACGGGTTTGCTGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR CCA 72 bp AAATCACTCGTAGCTACAGTAGTCGCCATATGGCAATaGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: KSLVATVVAIWQ*FALLFLEQFLG
Trigger: ACCCAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
3UTR-3UTR CAA 90 bp CCTGAGGTAAGGAGGAGCCAAGCTTTTCCATGTATTCAATTTCATAGGAGTTTCTCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 3 (lower is better)
Translates to: PEVRRSQAFPCIQFHRSFSSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...GAAACTCCTATGAAATTGAATACATGGAAAAGCTTGGCTCCTCCTTACCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
3UTR-3UTR CAA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGAACAAATGCTTGGCTTaGCAGCTCTGTGTCTTGTCT +
Preference number: 3 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPNKCLA*QLCVLS
Trigger: AGACAAGACACAGAGCTGCAAAGCCAAGCATTTGTT...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp CAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGAACCTGGGCTACTCCAGGACCGGCTaGGGAGGGAGCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QASLVGCLLLLGLAANLGYSRTG*GGSRGC
Trigger: ACAGCCTCGGCTCCCTCCGCAGCCGGTCCTGGAGTA...GCCCAGGTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCCCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LLPQASLVGCLLLLGLAAAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGGATGGGCCAGCCTGCTaGGGAGGGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLPQASLVGCLLLLGLAADGPAC*GGYLQK
Trigger: CTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATC...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCCTGAGGGGCCCTCTGTaGAGGGCATGGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPLRGPL*RAWRLR
Trigger: CCTCAGCCTCCATGCCCTTCACAGAGGGCCCCTCAG...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGAAGTCAGAGGACAGGTaGCTGTGGGGACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLPQASLVGCLLLLGLAAKSEDR*LWGQQG
Trigger: CCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTT...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAACCAGCGCCCTCAGGTGTGGCCGACTCCGTCTTTGTCTCTGGTGCTAAGTGTCCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QPAPSGVADSVFVSGAKCPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...ACACTTAGCACCAGAGACAAAGACGGAGTCGGCCACACCTGAGGGCGCTGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPEARAI*LASFRA
Trigger: AGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAAGGTTCTGGTGCCTCTaGAGCCTGCTGCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRRFWCL*SLLHPG
Trigger: CCCGGGATGCAGCAGGCTTCAGAGGCACCAGAACCT...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHWCPGG*GKPGRS
Trigger: AGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GACAGGGTCACCTCCACCGCCTCAGAGGCTGTGGTAAGAGGCACTGATTTCCTCTACTCCAGGACCGGCTaGGGAGGGAGCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRVTSTASEAVVRGTDFLYSRTG*GGSRGC
Trigger: ACAGCCTCGGCTCCCTCCGCAGCCGGTCCTGGAGTA...GAGGAAATCAGTGCCTCTTACCACAGCCTCTGAGGCGGTGGAGGTGACCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAAGTCAGAGGACAGGTaGCTGTGGGGACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPKSEDR*LWGQQG
Trigger: CCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAACCAGCGCCCTCAGGTGTGGCCGACTCCGTCTTTGTCTCTGGTGCTAAGTGTGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: QPAPSGVADSVFVSGAKCGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...ACACTTAGCACCAGAGACAAAGACGGAGTCGGCCACACCTGAGGGCGCTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLAAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCCCCCTGCAAGAAAGGTaGAGGAACCTGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPPLQER*RNLLEA
Trigger: AGCCTCCAGCAGGTTCCTGCACCTTTCTTGCAGGGG...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGAACCTGGGCTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: QASLVGCLLLLGLAANLGSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...GCCCAGGTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: CSSVLSRASTRSCSFRRLGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...TAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCCCTCCCAACTGGGGGTaGGTTCTGCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRPPNWG*VLHSAT
Trigger: GGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: CSSVLSRASTRSCSFRRLHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGCTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LLPQASLVGCLLLLGLAALELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLATAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VHALGPELAFSHLGDQLVGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGTGCACGGGCAGCAGATaGGGAGGCGCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LPRTWAISALALSSFSSACTGSR*GGALDC
Trigger: ACAGTCCAGAGCGCCTCCCCATCTGCTGCCCGTGCA...CGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCCGAGGCTGTATGTTCTaGGGCCAAAGGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPRGCMF*GQRSRT
Trigger: AGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCG...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLADRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGTGAGTTCTGCACTCTaGCACCTCCAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRVSSAL*HLQKPG
Trigger: CCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCAC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCCGCAGGCTGCCTATTTaGAAAGCATCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPRRLPI*KASSSS
Trigger: GGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCG...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: VHALGPELAFSHLGDQLVASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGATCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGAAGAAGTCCTCTGGTaGTCCGAGGTGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPREEVLW*SEVLFS
Trigger: CGAGAACAGCACCTCGGACCACCAGAGGACTTCTTC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATGCACGGGCAGCAGATaGGGAGGCGCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQCTGSR*GGALDC
Trigger: ACAGTCCAGAGCGCCTCCCCATCTGCTGCCCGTGCA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATCCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCCTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLALTLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAG...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCTTTGGAGGGAAGCTCTaGCCCCTGCTCGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRFGGKL*PLLVSS
Trigger: GGAGGAAACGAGCAGGGGTCAGAGCTTCCCTCCAAA...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGAGTATTGCATGGGCTaGCTTTGGAGGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPREYCMG*LWREAL
Trigger: CAGAGCTTCCCTCCAAAGGCAGCCCATGCAATACTC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACTCAGAAATGCATCCTaGTTCTTCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRLRNAS*FFWGWW
Trigger: CCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCTTGCTCAGCCACCTCTaGAGACACAGTGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRLLSHL*RHSARV
Trigger: GACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAA...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATTTGACAGGGGTCGTTaGCTCGGGGGTCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQFDRGR*LGGLKG
Trigger: GCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GCATCCAAGTCCACCGTCATACACGTCCACTTCTGGCTAGTGACTGCCAGCTTCTTTGACAGGGGTCGTTaGCTCGGGGGTCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASKSTVIHVHFWLVTASFFDRGR*LGGLKG
Trigger: GCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAA...GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATGACGGTGGACTTGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCCTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRLTLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAG...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ARNGQVHALGPELAFSHLRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...AAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQETSGG*AASLLV
Trigger: CACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTC...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp GCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGTGCCTTGGACTCTGAACTaGAGAAGTCCTCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AANLGNLCIGSVQFLFGVPWTLN*RSPLVV
Trigger: GACCACCAGAGGACTTCTTCAGTTCAGAGTCCAAGG...CACGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTGGCTGGGGCTGGCTaGAGGGACTGCGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLAGAG*RDCDPP
Trigger: GGGAGGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033141.7
ENSMUST00000207282.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCCTCCAGATAGCCAAGTaGACCACAGAGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VHALGPELAFSHLGDQLVLQIAK*TTERGG
Trigger: CCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAG...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATTGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNWCPGG*GKPGRS
Trigger: AGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCA...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTCCTCATGGAGTTTGTaGAGTGAGGTAGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPSSWSL*SEVAVS
Trigger: TGACACAGCTACCTCACTGCACAAACTCCATGAGGA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCATACTCGGCTTCCCATaGCCTACAGGAGTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRILGFP*PTGVGS
Trigger: GCTCCCTACTCCTGTAGGGCATGGGAAGCCGAGTAT...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGATGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRCKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGATGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTCGAAGCTGCTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HSKLLLPQASLVGCLLLLIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...CAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: ARNGQVHALGPELAFSHLREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...AAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHDGDIW*VSSFPL
Trigger: AAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLADGDIW*VSSFPL
Trigger: AAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTCGAAGCTGCTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HSKLLLPQASLVGCLLLLRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...CAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
3UTR CAA 72 bp CCTGCAAGAGAGGCTCCTGACTGGAGGGCAGACCTCTaGCGACTGGATGCTGGAGCTTTGTTGCTGCATTCA +
Preference number: 4 (lower is better)
Translates to: PAREAPDWRADL*RLDAGALLLHS
Trigger: TGAATGCAGCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGCCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: LLPQASLVGCLLLLGLAAPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GACAGGGTCACCTCCACCGCCTCAGAGGCTGTGGTAAGAGGCACTGATTTCCTCAGTGACCTTGGACTCTaGACTGAAGAAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DRVTSTASEAVVRGTDFLSDLGL*TEEVLW
Trigger: CCAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACT...GAGGAAATCAGTGCCTCTTACCACAGCCTCTGAGGCGGTGGAGGTGACCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp TCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCTGGTAGGCAGTGACCTTGGACTCTaGACTGAAGAAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFQSIHSKLLLPQASLVGSDLGL*TEEVLW
Trigger: CCAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACT...GCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGTTGCAAGACTGTGGTaGAGGAGACAGCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRVARLW*RRQQVS
Trigger: AGACACCTGCTGTCTCCTTCACCACAGTCTTGCAAC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCTGGCTGGGGCTGGCTaGAGGGACTGCGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSLAGAG*RDCDPP
Trigger: GGGAGGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033141.7
ENSMUST00000207282.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPRTWPRVSFFPSWRSARSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...ACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAAGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGATCTTTTCTGGCTCTTTaGCCCCTAGGGACAGTATTC +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRSFLAL*PLGTVF
Trigger: GAATACTGTCCCTAGGGGGCAAAGAGCCAGAAAAGA...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084513.12
ENSMUST00000207395.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGTCACTGGCTGGGGCTaGCTGCAGGGACTGCGACCC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMVTGWG*LQGLRP
Trigger: GGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAGTGAC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033141.7
ENSMUST00000207282.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAAACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQTAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCTCACTGACAACCCCTTaGCAGGCAAGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VHALGPELAFSHLGDQLVSLTTP*QASPLA
Trigger: GGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGA...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTTATTCTTCTGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FILLLQRSFQSIHSKLLLAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGFAALCLVSMVTALNNQRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACACACAGACAACTTGCTaGAGCTCAGTTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHTQTTC*SSVPDV
Trigger: GACATCGGGAACTGAGCTCCAGCAAGTTGTCTGTGT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTATTTTGAGTATTCTTaGGGGCCTTGGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPYFEYS*GPWDHQ
Trigger: CTGATGGTCCCAAGGCCCCCAAGAATACTCAAAATA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTCCCAGATGGCTTCTTaGGGAAGAAAGTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHSQMAS*GRKCSP
Trigger: TGGTGAGCACTTTCTTCCCCAAGAAGCCATCTGGGA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRDGDIW*VSSFPD
Trigger: ATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
3UTR CAA 72 bp AGGAGACGCTGTTCACGGAATCGGAAGGACAAACAGTaGAGCCGACGCTCGTATTGCACGCAACGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RRRCSRNRKDKQ*SRRSYCTQRPS
Trigger: ACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACAGCGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGCCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GCCTGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: AWYLCSSFFTRDRYSCAHWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...ATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACACCCTCGGGAGCTGTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQHPREL*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRGLLSA*QQTLTP
Trigger: AGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGTCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGTGATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AANLGNLCIGSVQFLFGVMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...CACGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGCCCAAGGGGGCCGGCTaGTCCATTTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMPKGAG*SISSCG
Trigger: CCCACAGCTGGAAATGGAGCAGCCGGCCCCCTTGGG...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAAAGAGGGCCTGGCATTTaGTTCTGGAGCAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQRGPGI*FWSSSH
Trigger: GTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCT...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGTCACTGGCTGGGGCTaGCTGCAGGGACTGCGACCC +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCVTGWG*LQGLRP
Trigger: GGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAGTGAC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033141.7
ENSMUST00000207282.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTTGTCACTGGCTGGGGCTaGCTGCAGGGACTGCGACCC +
Preference number: 4 (lower is better)
Translates to: SHLGDQLVTNLGEFFYLFVTGWG*LQGLRP
Trigger: GGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAGTGAC...AAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGGGTCAAGGGACTCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTGGGATGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GVKGLFTGVRVKVVRLLGWFFWG*WIDDLR
Trigger: CCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCA...TCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR CCA 90 bp AGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTTGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: SPRTWPRVSFFPSWRSARWFFWG*WIDDLR
Trigger: CCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCA...ACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPRTWAISALALSSFSSACKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...CGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTCCCTCTTGGTGTCCTaGCGGCTGCGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPISLLVS*RLREAR
Trigger: CCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGGGTCAAGGGACTCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTGGGAGAAGAAGTCCTCTGGTaGTCCGAGGTGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GVKGLFTGVRVKVVRLLGEEVLW*SEVLFS
Trigger: CGAGAACAGCACCTCGGACCACCAGAGGACTTCTTC...TCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR CCA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCTCATTTGAAATGCCATaGGAGAAAGTTGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPSFEMP*EKVGSN
Trigger: GTTGCTGCCAACTTTCTCCCATGGCATTTCAAATGA...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TNAWLCSSVSCLHGDCFEHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGATGGGCCAGCCTGCTaGGGAGGGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLDGPAC*GGYLQK
Trigger: CTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGGTTCTGGCAGCCATTaGGTGCTGTGTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLGSGSH*VLCGAI
Trigger: GATGGCCCCACACAGCACTCAATGGCTGCCAGAACC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGTGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPWCPGG*GKPGRS
Trigger: AGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCA...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATTGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHWCPGG*GKPGRS
Trigger: AGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCA...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTTCCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: WYLCSSFFTRDRYSCAHFPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...GAAATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATACTCCAGGACCGGCTaGGGAGGGAGCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQYSRTG*GGSRGC
Trigger: ACAGCCTCGGCTCCCTCCGCAGCCGGTCCTGGAGTA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR GCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGTACTCCAGGACCGGCTaGGGAGGGAGCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPYSRTG*GGSRGC
Trigger: ACAGCCTCGGCTCCCTCCGCAGCCGGTCCTGGAGTA...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR GCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAGAAAGTGCTCACCAGTaGCATCTGATGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQESAHQ*HLMLRT
Trigger: TGTCCTCAGCATCAGATGGCACTGGTGAGCACTTTC...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACCCCTCTCTCTCTCCTaGTGCATCCTCACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGPLSLS*CILTGR
Trigger: CCTGCCAGTGAGGATGCAGCAGGAGAGAGAGAGGGG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSTAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTTGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: ARNGQVHALGPELAFSHLCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...AAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SPRTWPRVSFFPSWRSARQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...ACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTCCCTCTTGGTGTCCTaGCGGCTGCGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSLLVS*RLREAR
Trigger: CCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATTCCCTCTTGGTGTCCTaGCGGCTGCGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHSLLVS*RLREAR
Trigger: CCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGA...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGCATCCCTGGCTGAGTaGCAGCAGGGGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSASLAE*QQGLWL
Trigger: CAACCAAAGCCCCTGCTGCCACTCAGCCAGGGATGC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACAGCTGCGTGTGCAGTaGGACTTGAAGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQQLRVQ*DLKLSL
Trigger: CAAGCTCAGCTTCAAGTCCCACTGCACACGCAGCTG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAAAACCTCACCTTTCTTaGTCTCCAGATGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQKPHLS*SPDGAC
Trigger: GCAAGCCCCATCTGGAGACCAAGAAAGGTGAGGTTT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGATTGAACTTTCCCAGATaGCTTCTTGGGGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRLNFPR*LLGEES
Trigger: ACTTTCTTCCCCAAGAAGCCATCTGGGAAAGTTCAA...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATGGGGTAAGTTCTACTaGCCTCTCCCTGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQWGKFY*PLPVPL
Trigger: GAGGGGAACAGGGAGAGGCCAGTAGAACTTACCCCA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
3UTR CAA 72 bp GGGTCAAGGGACTCTTCACAGGCGTCAGGGTCAAAGTaGTACGATTGTTGGGACAGTTTGGGAGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSRDSSQASGSK*YDCWDSLGDSC
Trigger: GCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATTTGACAGGGGTCGTTaGCTCGGGGGTCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGFDRGR*LGGLKG
Trigger: GCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTCATTCTTTCGAAAACCTTCCAGGACCTCCTTCATCTTTTCGTATCTCCTGAACCTCAGGCTCTGGGGTaGCTTCAGGGGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FILSKTFQDLLHLFVSPEPQALG*LQGVEG
Trigger: CCCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGG...TTCAGGAGATACGAAAAGATGAAGGAGGTCCTGGAAGGTTTTCGAAAGAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTCCTCCCAACTGGGGGTaGGTTCTGCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCPPNWG*VLHSAT
Trigger: GGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGCACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACAACTCTAACTCCTCCTaGAGTTTCTGGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHNSNSS*SFWANT
Trigger: AGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLETSGG*AASLLV
Trigger: CACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGGGCTTTGGTTGCTaGCTCTGGGGAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIRGFGC*LWGGTV
Trigger: GACTGTCCCTCCCCAGAGTCAGCAACCAAAGCCCCT...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAGCATGTTTGCAGTACTaGCAGCAGCTTCAATCTGTC +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQACLQY*QQLQSV
Trigger: GACAGATTGAAGCTGCTGTCAGTACTGCAAACATGC...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCACCTGGCTGTCCCCTTaGAGGGTGGCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRTWLSP*RVAASS
Trigger: GGAGGATGCAGCCACCCTTCAAGGGGACAGCCAGGT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCACAGGAGTAGGGAGCTaGGGGCCCAGCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCTGVGS*GPSCCL
Trigger: CAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCTGT...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GCCTGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: AWYLCSSFFTRDRYSCAHSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...ATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTTCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: FPILAISSSQILVSSSISAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AGTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SPRTWPRVSFFPSWRSARDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...ACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIEARAI*LASFRA
Trigger: AGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRREARAI*LASFRA
Trigger: AGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTC...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQEARAI*LASFRA
Trigger: AGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHWCPGG*GKPGRS
Trigger: AGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACAAAGGAGCAGGACTTaGACGGGCAGCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGQRSRT*TGSRWG
Trigger: TCCCCATCTGCTGCCCGTGCAAGTCCTGCTCCTTTG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCACTGGCACCTGGCCTaGTCTCCTCCAAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRHWHLA*SPPRLS
Trigger: GGACAGCCTTGGAGGAGAGCAGGCCAGGTGCCAGTG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CTCCTGAGGAGTGTCAAACATAAGGTACAAGGCCTGCTTCTTCGGAGTGTCATCTTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLRSVKHKVQGLLLRSVIFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...GATGACACTCCGAAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRTAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCCTGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AWYLCSSFFTRDRYSCAHCKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...ATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCCTGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATCTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AWYLCSSFFTRDRYSCAHLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...ATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLAGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TVVAIWQWFALLFLEQFLFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...CAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTTCCCTCTTGGTGTCCTaGCGGCTGCGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGSLLVS*RLREAR
Trigger: CCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGA...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTTATTCTTCTGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: FILLLQRSFQSIHSKLLLLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: LGFAALCLVSMVTALNNQLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGCACGGGCAGCAGATaGGGAGGCGCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHCTGSR*GGALDC
Trigger: ACAGTCCAGAGCGCCTCCCCATCTGCTGCCCGTGCA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGGCCTCTGGCTTCCTaGGGGTGCTCCCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYGPLAS*GCSPCS
Trigger: TGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCAACCTTCTGGGCCTCTaGCTTCCTGGGGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRNLLGL*LPGGAP
Trigger: GGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGTT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACAGTGGAGAACCTTCTaGGCCTCTGGCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRQWRTF*ASGFLG
Trigger: CCCCAGGAAGCCAGAGGCCCAGAAGGTTCTCCACTG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTTTGACAGGGGTCGTTaGCTCGGGGGTCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVFDRGR*LGGLKG
Trigger: GCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAA...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGLTLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACCCTCCCAACTGGGGGTaGGTTCTGCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYPPNWG*VLHSAT
Trigger: GGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACCTCCCAACTGGGGGTaGGTTCTGCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEPPNWG*VLHSAT
Trigger: GGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGGGGCGTTTTCCTGCTaGCTCTCCCAACTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMGAFSC*LSQLPL
Trigger: CAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAAAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: TNAWLCSSVSCLHGDCFERGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...TTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLVATVVAIWQWFALLFLDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCGATGGGCCAGCCTGCTaGGGAGGGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRDGPAC*GGYLQK
Trigger: CTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATC...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGATGGGCCAGCCTGCTaGGGAGGGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPDGPAC*GGYLQK
Trigger: CTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGATGGGCCAGCCTGCTaGGGAGGGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHDGPAC*GGYLQK
Trigger: CTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTCTTCACAGGCGTCAGGGTCAAAGTTGTACGATTGTTGGGACAGTTTGGGAGATGCTTCTGTAGAGATTaGCTCTTCCCAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFTGVRVKVVRLLGQFGRCFCRD*LFPGGC
Trigger: GCAGCCACCTGGGAAGAGTCAATCTCTACAGAAGCA...TCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGCCTGTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp TTTATTCTTCTGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTGAGCAGCTGGCTGGATaGCATCATCAGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FILLLQRSFQSIHSKLLLEQLAG*HHQFQG
Trigger: TCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTC...AAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATCAGATGTGTAGAGACTaGGCTGACAGCGTCACCATG +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNQMCRD*ADSVTM
Trigger: CATGGTGACGCTGTCAGCTCAGTCTCTACACATCTG...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATCCCCACTACCTCTGCTaGTCCAGAGTGGGACCCATC +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHPHYLC*SRVGPI
Trigger: GATGGGTCCCACTCTGGATCAGCAGAGGTAGTGGGG...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTCCAGGTAGGGCATaGAACTCACGTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRCPGRA*NSRAPQ
Trigger: CTGAGGGGCACGTGAGTTTCATGCCCTACCTGGACA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCCATCTGCTCGTCTCTaGCCGGGAGAGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRPSARL*PGEASC
Trigger: ACAGGATGCCTCTCCCGGTCAGAGACGAGCAGATGG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TTTTCTCTCTGTTCGTCCTCGATCATCTGTGCAATGGTCTTCTCATATTCGGCCCAGGGCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FSLCSSSIICAMVFSYSAQGLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGCCCTG...GGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAACAGAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGGTTTCTTGGTGGCTTaGTTCTTTTTCAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRGFLVA*FFFKEG
Trigger: ACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGTGAGTTCTGCACTCTaGCACCTCCAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMVSSAL*HLQKPG
Trigger: CCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCAC...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAGTGAGTTCTGCACTCTaGCACCTCCAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGVSSAL*HLQKPG
Trigger: CCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCAC...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACGCAGGCAAGTCCTCTTaGCCCCCACTGTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHAGKSS*PPLSDR
Trigger: CCTGTCGGACAGTGGGGGGCAAGAGGACTTGCCTGC...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQLELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACTCCAGATAGCCAAGTaGACCACAGAGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRLQIAK*TTERGG
Trigger: CCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCCTCCAGATAGCCAAGTaGACCACAGAGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCLQIAK*TTERGG
Trigger: CCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAG...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEEARAI*LASFRA
Trigger: AGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKWCPGG*GKPGRS
Trigger: AGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TNAWLCSSVSCLHGDCFEPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...TTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACATCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: TVVAIWQWFALLFLEQFLALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...CAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAAGTCACGAGGCCCAGTaGCCTCTCCAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQSHEAQ*PLQTAA
Trigger: AGCTGCTGTCTGGAGAGGGCACTGGGCCTCGTGACT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGCCCAGCATATTTTaGATGTTTGCAGTACTGACA +
Preference number: 4 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHLPSIF*MFAVLT
Trigger: TGTCAGTACTGCAAACATGCAAAATATGCTGGGCAA...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCCCTTGAAGGGTGGCTaGATCCTCCTCCATCACCTG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQPLKGG*ILLHHL
Trigger: CAGGTGATGGAGGAGGATGCAGCCACCCTTCAAGGG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACCAGGTTCAGGTCACTaGCTGGGGCTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRPGSGH*LGLAAG
Trigger: CCCTGCAGCCAGCCCCAGCCAGTGACCTGAACCTGG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033141.7
ENSMUST00000207282.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGTTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGWFFWG*WIDDLR
Trigger: CCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATCTCAGAAATGCATCCTaGTTCTTCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNLRNAS*FFWGWW
Trigger: CCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAG...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSTAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTTAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATAAGTCAGAGGACAGGTaGCTGTGGGGACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHKSEDR*LWGQQG
Trigger: CCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTCACTGACAACCCCTTaGCAGGCAAGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSSLTTP*QASPLA
Trigger: GGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTGCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: LPRTWAISALALSSFSSAKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...CGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTTCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: SHLGDQLVTNLGEFFYLFPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...AAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCCGCGAACCTGGGCAATCTCTGCATTGGCTCTGTCCAGTTTCTCTTCGGCGTGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: AANLGNLCIGSVQFLFGVESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...CACGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGCCGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: SSVLSRASTRSCSFRRLAESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCTCCCTCTTGGTGTCCTaGCGGCTGCGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCSLLVS*RLREAR
Trigger: CCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGA...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATCCCTCTTGGTGTCCTaGCGGCTGCGGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRSLLVS*RLREAR
Trigger: CCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACATGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAAGTCAACAGGAGCAGCTaGCTGGATGACATCATCAGT +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQVNRSS*LDDIIS
Trigger: ACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGAC...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACTGCACGGGCAGCAGATaGGGAGGCGCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYCTGSR*GGALDC
Trigger: ACAGTCCAGAGCGCCTCCCCATCTGCTGCCCGTGCA...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCAGCAAGGGCTCTGGTaGCTTCTTGCTGTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSQQGLW*LLAVPQ
Trigger: TTGAGGGACAGCAAGAAGCCACCAGAGCCCTTGCTG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTGCATGGGCTGCCTTTaGAGGGAAGCTCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMCMGCL*REALTP
Trigger: AGGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATAGGTGTGGGTCTGGCTaGCCACCGAGTTGCTTACCC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHRCGSG*PPSCLP
Trigger: GGGTAAGCAACTCGGTGGCCAGCCAGACCCACACCT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCAGGTGTGGGTCTGGCTaGCCACCGAGTTGCTTACCC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRRCGSG*PPSCLP
Trigger: GGGTAAGCAACTCGGTGGCCAGCCAGACCCACACCT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATTTGACAGGGGTCGTTaGCTCGGGGGTCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIFDRGR*LGGLKG
Trigger: GCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGGGCTGGTGGAGCTTTaGCAGGGGTCGTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERGLVEL*QGSLTR
Trigger: CCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPILTLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLTLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAACCTCCCAACTGGGGGTaGGTTCTGCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKPPNWG*VLHSAT
Trigger: GGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGGGGCGTTTTCCTGCTaGCTCTCCCAACTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTGAFSC*LSQLPL
Trigger: CAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTATGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLVATVVAIWQWFALLFLWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCATTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: AWLCSSVSCLHGDCFEQSLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...TGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCGGACTGGAGGAGACTTaGCGGGGCTCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCGLEET*RGSPEE
Trigger: CTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCC...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: TVVAIWQWFALLFLEQFLCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...CAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQETSGG*AASLLV
Trigger: CACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCCTTGGACTCTGAACTaGAGAAGTCCTCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSPWTLN*RSPLVV
Trigger: GACCACCAGAGGACTTCTTCAGTTCAGAGTCCAAGG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTTTTGCATCCCTGGCTaGGTGGCAGCAGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTFCIPG*VAAGAL
Trigger: CAAAGCCCCTGCTGCCACTCAGCCAGGGATGCAAAA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGTCTGTGGTTGCCTCTaGGCATCGCTGGTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCVCGCL*ASLVSR
Trigger: TCTGGACACCAGCGATGCTCAGAGGCAACCACAGAC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCAATCCTCCCCTGTCCTaGAGCATGACTGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSNPPLS*SMTGLL
Trigger: CAAAAGCCCAGTCATGCTTCAGGACAGGGGAGGATT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGCTTCTGGGTCTAGTTaGGATGGCTGGAGACGGTTC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIASGSS*DGWRRF
Trigger: GAACCGTCTCCAGCCATCTCAACTAGACCCAGAAGC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGCTTCTTGCCTGCTGTaGGTGAGCCTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIASCLL*VSLSSL
Trigger: CAGGGAACTCAGGCTCACTCACAGCAGGCAAGAAGC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCCGGTGGCTCAGAAATaGATCCTGGTTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIPVAQK*ILVLLG
Trigger: CCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGTCCCAGCTTCAGGGCTaGCGGGGCAAGAAGCACCGT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERSQLQG*RGKKHR
Trigger: ACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGA...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCTCCAGATAGCCAAGTaGACCACAGAGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRLQIAK*TTERGG
Trigger: CCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKEARAI*LASFRA
Trigger: AGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCISGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGCTCTTGCTGGGCCTTaGCGCGAACCTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEALAGP*REPGQS
Trigger: AGATTGCCCAGGTTCGCGGCAAGGCCCAGCAAGAGC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGCTAGCCTGGTAGGCTaGTTGCTCTTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCASLVG*LLLLGL
Trigger: AAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGCATCCACTCGAAGCTaGTCCTTCCGCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEASTRS*SFRRLA
Trigger: GGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCAAAGGAGCAGGACTTaGACGGGCAGCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSQRSRT*TGSRWG
Trigger: TCCCCATCTGCTGCCCGTGCAAGTCCTGCTCCTTTG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATAGCCTCCTAGCCCAGTaGTTCCAGCACACGATCCAG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSLLAQ*FQHTIQ
Trigger: CTGGATCGTGTGCTGGAAGCACTGGGCTAGGAGGCT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGACTACTGCTGCCTGTaGCCTCTTGCTCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIDYCCL*PLAHFP
Trigger: GGGGAAATGAGCAAGAGGGCACAGGCAGCAGTAGTC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGCGTGCTTCCATCTTCTaGATCCTTCCTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLRASIF*ILPGST
Trigger: AGTGCTGCCAGGAAGGATGCAGAAGATGGAAGCACG...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATCTCTCTCTCTCCTGCTaGATCCTCACTGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHLSLSC*ILTGRA
Trigger: TGCCCTGCCAGTGAGGATGCAGCAGGAGAGAGAGAG...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATCACTGACAACCCCTTaGCAGGCAAGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRSLTTP*QASPLA
Trigger: GGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTCACTGACAACCCCTTaGCAGGCAAGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMSLTTP*QASPLA
Trigger: GGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGCCTCCAGCTCCTTCTaGGAGGGCTTCTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKASSSF*EGFSGT
Trigger: GGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGAGGC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLDGDIW*VSSFPL
Trigger: AAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FPILAISSSQILVSSSISCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGAAGAAGTCCTCTGGTaGTCCGAGGTGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVEEVLW*SEVLFS
Trigger: CGAGAACAGCACCTCGGACCACCAGAGGACTTCTTC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp TGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTTCGTCAACAGGAGCAGCTaGCTGGATGACATCATCAGT +
Preference number: 4 (lower is better)
Translates to: WYLCSSFFTRDRYSCAHFVNRSS*LDDIIS
Trigger: ACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGAC...GAAATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTTGCTGGCAGCTTTCCTaGGAGGCAGTGCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCCWQLS*EAVLVP
Trigger: AGGGACAAGCACTGCCTCCCAGGAAAGCTGCCAGCA...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCACCAGCAAGGGCTCTaGTGGCTTCTTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRHQQGL*WLLAVP
Trigger: AGGGACAGCAAGAAGCCACCAGAGCCCTTGCTGGTG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCGTTTCCTCCTTGAGTaGACAAGCTCACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSRFLLE*TSSHLP
Trigger: GGGCAGATGTGAGCTTGTCCACTCAAGGAGGAAACG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATCATCCAGCTCCTGTTaGGACTTGCTCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQSSSSC*DLLSPC
Trigger: GCAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGTCTGTTTCTCCAGCTaGCAGCAAGGCATCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSVCFSS*QQGIPA
Trigger: TGCGGGGATGCCTTGCTGCCAGCTGGAGAAACAGAC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTTCAACACTGGCACCTaGCCTGCTCTCCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTFNTGT*PALLQG
Trigger: GCCTTGGAGGAGAGCAGGCCAGGTGCCAGTGTTGAA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTCATCTACATCTGCATaGCTCTGGGGAGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCSSTSA*LWGATG
Trigger: CCCTGTGGCTCCCCAGAGCCATGCAGATGTAGATGA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACAGGTGTGGGTCTGGCTaGCCACCGAGTTGCTTACCC +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHRCGSG*PPSCLP
Trigger: GGGTAAGCAACTCGGTGGCCAGCCAGACCCACACCT...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR TCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACGGGGCGTTTTCCTGCTaGCTCTCCCAACTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHGAFSC*LSQLPL
Trigger: CAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCC...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACGACAGGTCCGAGGGCTaGGGGAAGTCCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHDRSEG*GKSCLS
Trigger: TGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTC...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCACCCTCGGGAGCTGTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVHPREL*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGATGGGCCAGCCTGCTaGGGAGGGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKDGPAC*GGYLQK
Trigger: CTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGTTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCCTTGGACTCTGAACTaGAGAAGTCCTCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVPWTLN*RSPLVV
Trigger: GACCACCAGAGGACTTCTTCAGTTCAGAGTCCAAGG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCAGTGACCTTGGACTCTaGACTGAAGAAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSSDLGL*TEEVLW
Trigger: CCAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTGCTTCTGTAGAGATTaGCTCTTCCCAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVCFCRD*LFPGGC
Trigger: GCAGCCACCTGGGAAGAGTCAATCTCTACAGAAGCA...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTGCTTCTGTAGAGATTaGCTCTTCCCAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPICFCRD*LFPGGC
Trigger: GCAGCCACCTGGGAAGAGTCAATCTCTACAGAAGCA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACAGATGTGTAGAGACTaGGCTGACAGCGTCACCATG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRQMCRD*ADSVTM
Trigger: CATGGTGACGCTGTCAGCTCAGTCTCTACACATCTG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCAGATGTGTAGAGACTaGGCTGACAGCGTCACCATG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIQMCRD*ADSVTM
Trigger: CATGGTGACGCTGTCAGCTCAGTCTCTACACATCTG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGAAGGGCATGGAGGCTaGGGGGCACGGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKEGHGG*GARLFP
Trigger: TGGGAACAGCCGTGCCCCTCAGCCTCCATGCCCTTC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTTCCCCATCACAGCTaGAAGGCGGATGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHLPHHS*KADERV
Trigger: CACCCTTTCATCCGCCTTTCAGCTGTGATGGGGAAG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCGGGATCTCTGAGAGCTaGCTACTGCTGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCGISES*LLLPVP
Trigger: GGGCACAGGCAGCAGTAGTCAGCTCTCAGAGATCCC...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATGAGACATCTGGTGGGTaGGCAGCTTCCCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNETSGG*AASLIS
Trigger: TGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTC...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGCCGGTGGCTCAGAAATaGATCCTGGTTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTPVAQK*ILVLLG
Trigger: CCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGG...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGTGAGTTCTGCACTCTaGCACCTCCAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHVSSAL*HLQKPG
Trigger: CCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCAC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGTGAGTTCTGCACTCTaGCACCTCCAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPVSSAL*HLQKPG
Trigger: CCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCAC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TVVAIWQWFALLFLEQFLHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...CAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGLELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGCTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LGFAALCLVSMVTALNNQLELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACTCCAGATAGCCAAGTaGACCACAGAGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSELQIAK*TTERGG
Trigger: CCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGCGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CCTGAGGTAAGGAGGAGCCAAGCTTTTCCATGTATTCAATTTCATAGGAGTTTCCAAAGGAGCAGGACTTaGACGGGCAGCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PEVRRSQAFPCIQFHRSFQRSRT*TGSRWG
Trigger: TCCCCATCTGCTGCCCGTGCAAGTCCTGCTCCTTTG...GAAACTCCTATGAAATTGAATACATGGAAAAGCTTGGCTCCTCCTTACCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR GCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCCTCTGGAGACACAGTaGACGGGTCCAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCPLETQ*TGPGWQ
Trigger: TTGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGCCACACAGACAACTTaGTGGAGCTCAGTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMATQTT*WSSVPD
Trigger: ATCGGGAACTGAGCTCCAGCAAGTTGTCTGTGTGGC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACACTCTGTTTCTACTTaGTGTCTCTGTCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQHSVST*CLCLIQ
Trigger: TTGGATAAGACAGAGACAGCAAGTAGAAACAGAGTG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCAGGACTTTCATGAGGTaGTCCGGGGTCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRRTFMR*SGVLRG
Trigger: TCCTCTGAGGACCCCGGAGCACCTCATGAAAGTCCT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCCCACTGTTAATTCCTaGCTGCTTCTTGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSPTVNS*LLLACC
Trigger: ACAGCAGGCAAGAAGCAGGCAGGAATTAACAGTGGG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAAGCCTCATCTACATCTaGATGGCTCTGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCISLIYI*MALGSH
Trigger: GTGGCTCCCCAGAGCCATGCAGATGTAGATGAGGCT...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTGTGACATCACCTTCTaGTTCCTCAGCAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSCDITF*FLSSSC
Trigger: GCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACCTTTTCTGGCTCTTTaGCCCCTAGGGACAGTATTC +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGPFLAL*PLGTVF
Trigger: GAATACTGTCCCTAGGGGGCAAAGAGCCAGAAAAGG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207376.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTCCAGGTTCAGGTCACTaGCTGGGGCTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPPGSGH*LGLAAG
Trigger: CCCTGCAGCCAGCCCCAGCCAGTGACCTGAACCTGG...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033141.7
ENSMUST00000207282.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTTGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCWFFWG*WIDDLR
Trigger: CCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCA...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCCTCAGAAATGCATCCTaGTTCTTCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCLRNAS*FFWGWW
Trigger: CCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAG...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCTAEEE*EGRKGL
Trigger: AAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMCKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSCKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGTGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAGTCAGAGGACAGGTaGCTGTGGGGACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCKSEDR*LWGQQG
Trigger: CCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATCACTGACAACCCCTTaGCAGGCAAGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQSLTTP*QASPLA
Trigger: GGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTCACTGACAACCCCTTaGCAGGCAAGTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSLTTP*QASPLA
Trigger: GGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAGGGTGCTTCCGGCGTaGCAGCTGGAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKRVLPA*QLEWGP
Trigger: AGGACCCCACTCCAGCTGCCACGCCGGAAGCACCCT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ACAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TNAWLCSSVSCLHGDCFEQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...TTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTAGAGAGGCTCCTGACTaGAGGGCAGACCTCTTGCGA +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLREAPD*RADLLR
Trigger: TCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCT...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGGTGCCCAAGGCCATaGCCTCCAGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPGCPRP*PPAPSG
Trigger: CCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMDGDIW*VSSFPL
Trigger: AAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QMLGFAALCLVSMVTALNRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...GTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACCTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TVVAIWQWFALLFLEQFLSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...CAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGAGGCTGTATGTTCTaGGGCCAAAGGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHRGCMF*GQRSRT
Trigger: AGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTTGCACGGGTCCAGGCTaGCAACACTTTCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSCTGPG*QHFQKQ
Trigger: CTGCTTCTGAAAGTGTTGCCAGCCTGGACCCGTGCA...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGATGTCCCTGTCTGTaGTTGCCTCTGAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHRCPCL*LPLSIA
Trigger: AGCGATGCTCAGAGGCAACCACAGACAGGGACATCG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTCCCATTCAGCTGGCTaGCTGCTGCCACACAGACAA +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSHSAG*LLPHRQ
Trigger: TTGTCTGTGTGGCAGCAGCCAGCCAGCTGAATGGGA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTAAGCTCCCATTCAGCTaGCTGGCTGCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGKLPFS*LAAATQ
Trigger: CTGTGTGGCAGCAGCCAGCCAGCTGAATGGGAGCTT...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGCTCTCATCAGGCTCTaGAGGAGAAGAGATACTCGG +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMALIRL*RRRDTR
Trigger: CCGAGTATCTCTTCTCCTCCAGAGCCTGATGAGAGC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SLVATVVAIWQWFALLFLDGDIW*VSSFPD
Trigger: ATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTCCCAACTGGGGGTaGGTTCTGCACTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNPPNWG*VLHSAT
Trigger: GGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGGGGCGTTTTCCTGCTaGCTCTCCCAACTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERGAFSC*LSQLPL
Trigger: CAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACACTGTAGAGATGGCTaGGGGTGCTTCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKHCRDG*GCFRRG
Trigger: GCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTG...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCILTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATCACCCTCGGGAGCTGTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHHPREL*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTG...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACACCCTCGGGAGCTGTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIHPREL*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCACCCTCGGGAGCTGTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSHPREL*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCETSGG*AASLLV
Trigger: CACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTC...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKETSGG*AASLLV
Trigger: CACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACATTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCTCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCTTGGACTCTGAACTaGAGAAGTCCTCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHPWTLN*RSPLVV
Trigger: GACCACCAGAGGACTTCTTCAGTTCAGAGTCCAAGG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGCTTCTGTAGAGATTaGCTCTTCCCAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRCFCRD*LFPGGC
Trigger: GCAGCCACCTGGGAAGAGTCAATCTCTACAGAAGCA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGAGCAGCTGGCTGGATaGCATCATCAGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYEQLAG*HHQFQG
Trigger: TCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGAGCAGCTGGCTGGATaGCATCATCAGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGEQLAG*HHQFQG
Trigger: TCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACCAGCTGAAAGGCGGATaGAAGGGTGAGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHQLKGG*KGEWLF
Trigger: GAAGAGCCACTCACCCTTTCATCCGCCTTTCAGCTG...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTCCATGGCCTATTGTTaGGTCTTTCCCATTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRSMAYC*VFPIAG
Trigger: CCCCGCAATGGGAAAGACTCAACAATAGGCCATGGA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCATCCAGGAGAGCTACTaGGTCAGGTGGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCIQESY*VRWTGQ
Trigger: CTGCCCTGTCCACCTGACTCAGTAGCTCTCCTGGAT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATACCCATCATCTTCTCTaGTGCTGGATCCTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHTHHLL*CWILGY
Trigger: GTACCCCAGGATCCAGCATCAGAGAAGATGATGGGT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGAGACATCTGGTGGGTaGGCAGCTTCCCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPETSGG*AASLIS
Trigger: TGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGAGACATCTGGTGGGTaGGCAGCTTCCCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQETSGG*AASLIS
Trigger: TGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTTCGTCCTCGATCATCTGTGCAATGGTCTTCTCATATTCGGCCACAATTTTCCAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VRPRSSVQWSSHIRPQFSSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...GGAAAATTGTGGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR GCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPILELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCTCCAGATAGCCAAGTaGACCACAGAGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERLQIAK*TTERGG
Trigger: CCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCCTCGGTGGACCCGATaGGGGAGTACAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCPRWTR*GSTRQF
Trigger: AAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGCGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LGFAALCLVSMVTALNNQNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGAGAGCTGACTACTGCTaGCTGTGCCCTCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTRADYC*LCPLAH
Trigger: ATGAGCAAGAGGGCACAGGCAGCAGTAGTCAGCTCT...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRCKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTTCCTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: WYLCSSFFTRDRYSCAHFLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...GAAATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGAAGTCAGAGGACAGGTaGCTGTGGGGACAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRKSEDR*LWGQQG
Trigger: CCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTT...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GCCTGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: AWYLCSSFFTRDRYSCAHIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...ATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGGCGTGGCAGCTGGAGTaGGGTCCTGAGAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPAWQLE*GPEKAG
Trigger: ACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTTCCGGCGTGGCAGCTaGAGTGGGGTCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPFRRGS*SGVLRR
Trigger: CCTTCTCAGGACCCCACTCCAGCTGCCACGCCGGAA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCISSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTTTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: SHLGDQLVTNLGEFFYLFSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...AAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPDGDIW*VSSFPL
Trigger: AAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGTTTCTCCACCTCGGTaGACCCGATGCGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKVSPPR*TRCGST
Trigger: TGTACTCCCGCATCGGGTCCACCGAGGTGGAGAAAC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACTGGAACAGAAGGCCTaGGGGTTTCTCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRLEQKA*GFLHLG
Trigger: ACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAGAGTCCAGGTCTaGCTGCTGGAACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKCRVQV*LLEQKA
Trigger: GGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTCTGCTCTGGCAACCTaGAGTGCAGAGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHSALAT*SAESRS
Trigger: AGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCICTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACGAGGCTGTATGTTCTaGGGCCAAAGGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSERGCMF*GQRSRT
Trigger: AGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACCATTGAGTGCTGTGTaGGGCCATCTACTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIPLSAV*GHLLQE
Trigger: CTCCTGAAGTAGATGGCCCCACACAGCACTCAATGG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATTTCCACTTTCTGCTaGCAGCTTTCCTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQISTFC*QLSWEA
Trigger: TGCCTCCCAGGAAAGCTGCCAGCAGAAAGTGGAAAT...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACCCACAAGGTTGGCCTaGGGACATCAGCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRPTRLA*GHQQAF
Trigger: GAAGGCTTGCTGATGTCCCCAGGCCAACCTTGTGGG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTACTGAGGAGTTCTTCTaGAGCCACCAGGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCTEEFF*SHQVQL
Trigger: AAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGT...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHDGDIW*VSSFPD
Trigger: ATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRLTLHS*PLESAE
Trigger: CTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGTGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGGGGCGTTTTCCTGCTaGCTCTCCCAACTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRGAFSC*LSQLPL
Trigger: CAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATGGGGACTTAGAAGGTaGGCTGGGGGTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRWGLRR*AGGLRG
Trigger: TCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCCCA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGGCTGGAGTGGGGTCCTaGGAAGGCGGGTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPAGVGS*EGGSDR
Trigger: TCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGC...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTGLLSA*QQTLTP
Trigger: AGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTTTTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SHLGDQLVTNLGEFFYLFFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...AAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTATCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SLVATVVAIWQWFALLFLSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAAGTGACCTTGGACTCTaGACTGAAGAAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCISDLGL*TEEVLW
Trigger: CCAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACT...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAGATGTGTAGAGACTaGGCTGACAGCGTCACCATG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGQMCRD*ADSVTM
Trigger: CATGGTGACGCTGTCAGCTCAGTCTCTACACATCTG...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAGACTCAAGGTCAGCTaGGTTTTGCATCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYRLKVS*VLHPWL
Trigger: CAGCCAGGGATGCAAAACTCAGCTGACCTTGAGTCT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGCCACAACTCTATTTTaGGTATTCTTGGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMATTLF*VFLGAL
Trigger: CAAGGCCCCCAAGAATACTCAAAATAGAGTTGTGGC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAAGGCTCTGGTCAGCCTaGAGGAAGCCACTACTCAGA +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRRLWSA*RKPLLR
Trigger: TCTGAGTAGTGGCTTCCTTCAGGCTGACCAGAGCCT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTCTCAGCCTCAACAGCTaGCTCTTGCTTCTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCLSLNS*LLLLLN
Trigger: GTTGAGAAGAAGCAAGAGTCAGCTGTTGAGGCTGAG...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGGTGAGCAGCTTCCCTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTGEQLP*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGGTGAGCAGCTTCCCTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSGEQLP*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp ACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTGGGTGAGCAGCTTCCCTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVVAIWQWFALLFLEQFLGEQLP*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCAGGGAAGCTGCTCACC...CAAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGAGACATCTGGTGGGTaGGCAGCTTCCCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEETSGG*AASLIS
Trigger: TGAAATCAGGGAAGCTGCTCACCCACCAGATGTCTC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCCGGTGGCTCAGAAATaGATCCTGGTTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCPVAQK*ILVLLG
Trigger: CCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATGGTTTCTTGGTGGCTTaGTTCTTTTTCAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ALGPELAFSHLGDQLVTNGFLVA*FFFKEG
Trigger: ACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACC...ATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAGTGAGTTCTGCACTCTaGCACCTCCAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRVSSAL*HLQKPG
Trigger: CCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCAC...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCILELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGGACAAGCTCACATCTaGCCAAGGCTTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGGQAHI*PRLPFL
Trigger: GAGGAAAGGAAGCCTTGGGCAGATGTGAGCTTGTCC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCTGAGAGCTGACTACTaGTGCCTGTGCCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCLRADY*CLCPLA
Trigger: AGCAAGAGGGCACAGGCAGCAGTAGTCAGCTCTCAG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACGGGCCTGAAACAGTGTaGTGTGTCAGAACGTCCACA +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHGPETV*CVRTST
Trigger: TGTGGACGTTCTGACACAGCACACTGTTTCAGGCCC...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTTCCCTGATTTCAATTaGTTCTGCTGGGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIFPDFN*FCWGAQ
Trigger: TTGGGCACCCCAGCAGAAGCAATTGAAATCAGGGAA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ACAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAATTCCCTGATTTCAATTaGTTCTGCTGGGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: TNAWLCSSVSCLHGDCFEFPDFN*FCWGAQ
Trigger: TTGGGCACCCCAGCAGAAGCAATTGAAATCAGGGAA...TTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCTTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRFFWGW*IDDLRL
Trigger: GAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCTCAGAAATGCATCCTaGTTCTTCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGLRNAS*FFWGWW
Trigger: CCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAG...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACCTCAGAAATGCATCCTaGTTCTTCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHLRNAS*FFWGWW
Trigger: CCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAG...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSCKSRC*LSACLH
Trigger: ATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACA...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTTCAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: WYLCSSFFTRDRYSCAHFKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...GAAATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGCAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTACAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: SLVATVVAIWQWFALLFLQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGDGDIW*VSSFPL
Trigger: AAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTTGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGTCAACAGGAGCAGCTaGCTGGATGACATCATCAGT +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTVNRSS*LDDIIS
Trigger: ACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGAC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCGAGGCTGTATGTTCTaGGGCCAAAGGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCRGCMF*GQRSRT
Trigger: AGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAGGGCAGAGATGATCTaGGCAGTGGAGAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYRAEMI*AVENLL
Trigger: CAGAAGGTTCTCCACTGCCCAGATCATCTCTGCCCT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACTTCTGCTTCTGAGCTaGCCAAGCAACCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSELLLLS*PSNLLR
Trigger: CCTCAGAAGGTTGCTTGGCCAGCTCAGAAGCAGAAG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTGGCAGCAGGGGCTTTaGTTGCTGACTCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNWQQGL*LLTLGR
Trigger: CCTCCCCAGAGTCAGCAACCAAAGCCCCTGCTGCCA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGCCATGGGAGAAAGTTaGCAGCAACAGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGAMGES*QQQPLL
Trigger: CAACAAGGGCTGTTGCTGCCAACTTTCTCCCATGGC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTATGCTGAGGACAGGATaGGGTCCTCCTCATGGAGTT +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGMLRTG*GPPHGV
Trigger: AACTCCATGAGGAGGACCCCATCCTGTCCTCAGCAT...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACCTGGAGACGGTTCTTTaGAGATGGTGGGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYLETVL*RWWETV
Trigger: GACAGTCTCCCACCATCTCCAAAGAACCGTCTCCAG...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTACTTGGAGTATTGCATaGGCTGCCTTTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSTWSIA*AAFGGK
Trigger: CTTCCCTCCAAAGGCAGCCCATGCAATACTCCAAGT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACCCATCTGCAGTTCCTaGTTGCAAGACTGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIPICSS*LQDCGE
Trigger: TTCACCACAGTCTTGCAACCAGGAACTGCAGATGGG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCGTCTCAGCCCTGCTTaGTGTGACATCACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERRLSPA*CDITFC
Trigger: GCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
3UTR CAA 72 bp CTAAACGTGTCAGTCTTTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCATCCCCATCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LNVSVFSGVFFF*AGLFNPSPSAS
Trigger: GGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACTGACACGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGGGGCGTTTTCCTGCTaGCTCTCCCAACTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKGAFSC*LSQLPL
Trigger: CAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAGGGGACCTTGGAGGTaGGGCAGGAGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKRGPWR*GRSVVK
Trigger: CTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTGCAAGAGAGGCTCCTaGCTGGAGGGCAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNCKRGS*LEGRPL
Trigger: AAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACACCCTCGGGAGCTGTaGTTTCAATTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRHPREL*FQLLLL
Trigger: CAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGAACTCTAACTCCTCCTaGAGTTTCTGGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLNSNSS*SFWANT
Trigger: AGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTT...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEGLLSA*QQTLTP
Trigger: AGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNETSGG*AASLLV
Trigger: CACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTTTGGTCTGAGATCTTaGACTTTCCCAGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIFGLRS*TFPDGF
Trigger: GAAGCCATCTGGGAAAGTTCAAGATCTCAGACCAAA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGCCCTGTCCTGAAGCATaGCTGGGCTTTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRPCPEA*LGFWSE
Trigger: CTCAGACCAAAAGCCCAGTCATGCTTCAGGACAGGG...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGGTTTCTTGGTGGCTTaGTTCTTTTTCAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLGFLVA*FFFKEG
Trigger: ACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTCTGGCAACCTGGAGTaGAGAGTCCAGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNSGNLE*RVQVWL
Trigger: CAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: QMLGFAALCLVSMVTALNVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...GTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTCGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGCTGGCAATTGGCCAGTaGGATTGGAGGATGAATTTG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTLAIGQ*DWRMNL
Trigger: CAAATTCATCCTCCAATCGCACTGGCCAATTGCCAG...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTGGACTGTATCATTTTaGCCCTGCAAGAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQWTVSF*PCKKGA
Trigger: TGCACCTTTCTTGCAGGGGCAAAATGATACAGTCCA...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATCTTGGGGAAGAAAGTaGTCACCAGTGCCATCTGAT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCISWGRK*SPVPSD
Trigger: ATCAGATGGCACTGGTGAGCACTTTCTTCCCCAAGA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGCAGCTTTTCATCTTTaGTCTCATCAGGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIAAFHL*SHQALE
Trigger: CTCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGTCGTCCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: PRPRPAICSLLENLTVSLSSDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGGACGA...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRWFFWG*WIDDLR
Trigger: CCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCA...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACTGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSELSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGCCCCATCCGCTTCCGTaGTGCTGGCTGGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPPHPLP*CWLGSQ
Trigger: TTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGG...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCAGACCTCTTGCGACTaGATGCTGGAGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERQTSCD*MLELCC
Trigger: GCAACAAAGCTCCAGCATCCAGTCGCAAGAGGTCTG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHRQFWR*RHLVGE
Trigger: CTCACCCACCAGATGTCTCCATCTCCAAAACTGCCT...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATGCACCTTCAGGGCCTaGTACCTCTGTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRCTFRA*YLCSSF
Trigger: GAAAGAGGAACAGAGGTACCAGGCCCTGAAGGTGCA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTCCACCCCACAAGGTTaGCCTGGGGACATCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPSTPQG*PGDISK
Trigger: CTTGCTGATGTCCCCAGGCCAACCTTGTGGGGTGGA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCGTCCACAGAACTTCTaGGCATCCCGTCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERRPQNF*ASRLFL
Trigger: GAGAAACAGACGGGATGCCCAGAAGTTCTGTGGACG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGATTTTCCAAAGCAGGTaGAGGCTCCTTTACAGGACT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMIFQSR*RLLYRT
Trigger: AGTCCTGTAAAGGAGCCTCCACCTGCTTTGGAAAAT...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAACCTGGCATTTGCTTCTaGAGCAGCAGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKPGICF*SSSHMH
Trigger: ATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGG...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGACATCTGCATGGCTCTaGGGAGCCACAGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRTSAWL*GATGKS
Trigger: TGACTTCCCTGTGGCTCCCCAGAGCCATGCAGATGT...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGATGGAGACATCTGGTaGGTGAGCAGCTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERDGDIW*VSSFPD
Trigger: ATCAGGGAAGCTGCTCACCCACCAGATGTCTCCATC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAACAGAGGAGACCGCTTTaGAGACTTCTTCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEQRRPL*RLLHRL
Trigger: AAGACGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACCAGAGGAGACCGCTTTaGAGACTTCTTCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHQRRPL*RLLHRL
Trigger: AAGACGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
3UTR CAA 72 bp GCGTCAGGGTCAAAGTTGTACGATTGTTGGGACAGTTaGGGAGACTCTTGCATTTTTGAGGTGGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: ASGSKLYDCWDS*GDSCIFEVEEK
Trigger: TTTTTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCTGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207789.2
CDS-3UTR TCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTGTGGTAAGAGGCACTaGTTTCCTCCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPCGKRH*FPPNWG
Trigger: CCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAAACTCCAGCCTCACTaGCAACCCCTTGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKKLQPH*QPLGRQ
Trigger: TTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: RPRPRPAICSLLENLTVSPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACCCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: QMLGFAALCLVSMVTALNPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...GTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGGGAGTGTCATCGTCCTaGGGTAAGGAGGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPGVSSS*GKEEPS
Trigger: GCTTGGCTCCTCCTTACCTCAGGACGATGACACTCC...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAAACTCTAACTCCTCCTaGAGTTTCTGGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRNSNSS*SFWANT
Trigger: AGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATTTATCCCTCCACTCTaGGACTTCTCTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKFIPPL*DFSLLG
Trigger: GCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGATGGAGTTTGTGCAGTaGGGTAGCTGTGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERMEFVQ*GSCVSH
Trigger: GTGACTGACACAGCTACCTCACTGCACAAACTCCAT...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCTCCTGGCAGCACTATTaGTATGCAGGTAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCSWQHY*YAGKGC
Trigger: ACACCCCTTACCTGCATATCAATAGTGCTGCCAGGA...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAATGGCTTTTGTCACCTTaGGCAGAAGCCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEWLLSP*AEASST
Trigger: TGTAGATGAGGCTTCTGCTCAAGGTGACAAAAGCCA...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKGSCAT*ICGKGP
Trigger: GGGACCCTTACCACAGATGCATGTGGCACAGGATCC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGGTTTCTTGGTGGCTTaGTTCTTTTTCAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQGFLVA*FFFKEG
Trigger: ACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTTGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPISLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MLGFAALCLVSMVTALNNSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTCATCCGCTTCCGTGGTaGTGGCTGGGATCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPHPLPW*WLGSQK
Trigger: CTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATG...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRLELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGGGATAGGTACTCCTaGGCACATTTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRRDRYS*AHFFNT
Trigger: GGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGATTCAGCAACCACCTaGCCCACTACCTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRDSATT*PTTSAD
Trigger: ATCAGCAGAGGTAGTGGGGCAGGTGGTTGCTGAATC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCTGCCTGTGCCCTCTTaGTCATTTCCCCCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNLPVPS*SFPPSA
Trigger: TGCACTAGGGGGAAATGAGCAAGAGGGCACAGGCAG...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGTGGGGGCATCCTGGTTaGCCAGCATATTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERWGHPG*PAYFAC
Trigger: ACATGCAAAATATGCTGGGCAACCAGGATGCCCCCA...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATCTGGAGCCACCAGGTaGAGCTTTTCATCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRSGATR*SFSSLL
Trigger: GAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTCGTCCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCSSDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGGACGA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ACAAATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACTTTGTTTATCCTTCTaGTCCAGCGTTCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TNAWLCSSVSCLHGDCFELCLSF*SSVLSR
Trigger: TCTGGAAAGAACGCTGGAGCAGAAGGATAAACAAAG...TTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPWFFWG*WIDDLR
Trigger: CCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATCTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTCTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGCTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGGACTCTCTTCACCTaGTTCCTGTTGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKWTLFT*FLLGLL
Trigger: AAGGAGACCCAACAGGAACCAGGTGAAGAGAGTCCA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCTAAGTGTTCCTCACTaGGGACTGGACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCLSVPH*GLDSLH
Trigger: GTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACTCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: LGFAALCLVSMVTALNNQIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: SLVATVVAIWQWFALLFLKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGCCGCTTCCGTGGTGCTaGCTGGGATCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPPLPWC*LGSQKR
Trigger: CCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGG...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: LGFAALCLVSMVTALNNQESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...CTGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LENLTVSLIQELRGQLAMCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPICCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPISCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGAAGAAGTCCTCTGGTaGTCCGAGGTGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKEEVLW*SEVLFS
Trigger: CGAGAACAGCACCTCGGACCACCAGAGGACTTCTTC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGTCAACAGGAGCAGCTaGCTGGATGACATCATCAGT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERVNRSS*LDDIIS
Trigger: ACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGAC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTTGCCCATTTGTAGGTaGTTGGTTCTTGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRLPICR*LVLVTE
Trigger: CTCTGTGACAAGAACCAACCACCTACAAATGGGCAA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAATTTGTTGACCGTTGCTaGGCAATGTTTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEFVDRC*AMFPGA
Trigger: AGCACCTGGAAACATTGCCCAGCAACGGTCAACAAA...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGCCCAGCTGTTGCTTaGCTTGCTGGTCTTCAACCT +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPGPAVA*LAGLQP
Trigger: AGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: IVHSLRQESRCICSRPIRPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTTGACGGGGCTCTCCTaGGGAGTGTCAAACATAAGG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNLTGLS*GVSNIR
Trigger: CCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTAACTCTAACTCCTCCTaGAGTTTCTGGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCNSNSS*SFWANT
Trigger: AGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTT...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAAAGGTTGTCTCCATGTaGTCTGCTTTCCTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRKVVSM*SAFLSS
Trigger: GCTAGAGAGGAAAGCAGATCACATGGAGACAACCTT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCATTACTGTGTGCCTTTaGAACCTCACCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRITVCL*NLTFLG
Trigger: ACCAAGAAAGGTGAGGTTTCAAAGGCACACAGTAAT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACCATCTTCTCTTTGTTaGCCGTTGCTGGGCAATGTT +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRPSSLC*PLLGNV
Trigger: AACATTGCCCAGCAACGGTCAACAAAGAGAAGATGG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACTTCAAAACACTTCCATaGGAAGAGCCATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYFKTLP*EEPFRA
Trigger: TGCCCTGAATGGCTCTTCTCATGGAAGTGTTTTGAA...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGGTTTCTTGGTGGCTTaGTTCTTTTTCAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSGFLVA*FFFKEG
Trigger: ACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGGTTTCTTGGTGGCTTaGTTCTTTTTCAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCGFLVA*FFFKEG
Trigger: ACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGTGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: NQQMWINCTLLKARVPMHVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTTCTCCAGGACCAGCTaGTGTACAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNFSRTS*CTVWWE
Trigger: CTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGAAGGATCTGTACTCTaGTTCTTCAGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKEGSVL*FFRPGS
Trigger: TGACCCAGGTCTGAAGAAGCAGAGTACAGATCCTTC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACACCATCTCGTTCCTCTaGTTTCTGGAAACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHTISFL*FLETSK
Trigger: CTTGGAAGTTTCCAGAAAGCAGAGGAACGAGATGGT...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATCTTTTCTGGCTCTTTaGCCCCTAGGGACAGTATTC +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRSFLAL*PLGTVF
Trigger: GAATACTGTCCCTAGGGGGCAAAGAGCCAGAAAAGA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084513.12
ENSMUST00000207395.2
CDS-3UTR GCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCTTCCCTGATTTCAATTaGTTCTGCTGGGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCFPDFN*FCWGAQ
Trigger: TTGGGCACCCCAGCAGAAGCAATTGAAATCAGGGAA...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATTCCCTGATTTCAATTaGTTCTGCTGGGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRFPDFN*FCWGAQ
Trigger: TTGGGCACCCCAGCAGAAGCAATTGAAATCAGGGAA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACTCAGAAATGCATCCTaGTTCTTCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKLRNAS*FFWGWW
Trigger: CCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAG...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTGCTGGAAGCACTGTTaGATCCTGTGCCACATGCAT +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRCWKHC*ILCHMH
Trigger: ATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCA...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACCTGTGGGTTTCTTGGTaGCTTGCTTCTTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHLWVSW*LASFSR
Trigger: CCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAG...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCGGGCATTTTGGCAACTaGCTTCTTGCCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRGHFGN*LLAYLF
Trigger: AAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCC...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: QRPRPRPAICSLLENLTVIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: SIVHSLRQESRCICSRPIESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERQRRPL*RLLHPK
Trigger: TTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGTTCAATTGCTTCTGCTaGGGTGCCCAAGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPFNCFC*GAQGHG
Trigger: GCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAA...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: INCTLLKARVPMHMFTSHCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PYLERGHSSAYGSERRRCCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FPILAISSSQILVSSSISCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: MWINCTLLKARVPMHMFTCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTTTGCTTTTAGAGGGATaGCAGCCTTCGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGLLLEG*QPSRNS
Trigger: GGAATTTCTCGAAGGCTGCCATCCCTCTAAAAGCAA...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACCAGGTGCTCTTTTATaGAATGGCTTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIPGALL*NGFCHL
Trigger: AAGGTGACAAAAGCCATTCCATAAAAGAGCACCTGG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
3UTR CAA 72 bp CTTTTTCCCATCTTGGCGATCAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCTTTATTCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFPILAISSSQI*VSSSISLFFCS
Trigger: GGAGCAGAAGAATAAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSERLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ICSLLENLTVSLIQELRGRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKGLLSA*QQTLTP
Trigger: AGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNGLLSA*QQTLTP
Trigger: AGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCGTTTTTCTAAGATCTaGTGTTGGCTTCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCRFSKI*CWLPFC
Trigger: GCAGAACGGAAGCCAACATCAGATCTTAGAAAAACG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACAAGACAGTTTTCTCTaGCAGTCTTGTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRQDSFL*QSCSRL
Trigger: CAGTCTGGAACAAGACTGTCAGAGAAAACTGTCTTG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGATTCCTTGGAACTCCTaGCTTTTTACTATGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRIPWNS*LFTMGP
Trigger: CGGCCCCATAGTAAAAAGTCAGGAGTTCCAAGGAAT...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPSCKSR*WLSACL
Trigger: AAGACAAGCCGATAGCCAGCAGCGGGACTTACAACT...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCTGGAGCTTTGTTGCTaGATTCACAAGGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNLELCC*IHKGFG
Trigger: ACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAG...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKDFNCF*WGAQGH
Trigger: ATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAATGCATTTCCACTTTCTaGTGGCAGCTTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKCISTF*WQLSWE
Trigger: CTCCCAGGAAAGCTGCCAGCAGAAAGTGGAAATGCA...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAACTTCTTCACGCAGGCTaGCTATTTGCAAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKLLHAG*LFAKHH
Trigger: ATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAG...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGAAGATCTTGGTGATATaGTCCCTAAAATCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KPNQQMWINCTLLKARVPKILVI*SLKSGS
Trigger: GCTTCCTGATTTTAGGGAGCATATCACCAAGATCTT...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGGCAATGTTTCCAGGTaGTCTTTTATGGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEGNVSR*SFMEWL
Trigger: AAGCCATTCCATAAAAGAGCACCTGGAAACATTGCC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACATATTTTGCATGTTTaGAGTACTGACAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIHILHV*STDSSF
Trigger: GAAGCTGCTGTCAGTACTGCAAACATGCAAAATATG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: QPYLERGHSSAYGSERRRIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAAGTTGTACGATTGTTaGGACAGTTTGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYKLYDC*DSLGDS
Trigger: AGAGTCTCCCAAACTGTCCCAACAATCGTACAACTT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGTCCTCATCTGTGGCGTaGACCACTGTAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPSSSVA*TTVEMA
Trigger: AGCCATCTCTACAGTGGTCCACGCCACAGATGAGGA...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATATACACGTCCACTTCTaGCTAGTGACTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNIHVHF*LVTASF
Trigger: GAAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTAT...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGATATCCATCTGTTCTGTaGCAGCCAGATCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRYPSVL*QPDLQK
Trigger: TTTCTGCAGATCTGGCTGCCACAGAACAGATGGATA...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACCAGAACTTTATCCTTaGGTGATGAACTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: CSLLENLTVSLIQELRGQPELYP*VMNLEY
Trigger: ATACTCCAAGTTCATCACCCAAGGATAAAGTTCTGG...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp TTCATTCTTTCGAAAACCTTCCAGGACCTCCTTCATCTTTTCGTATCTCCTGAAAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: FILSKTFQDLLHLFVSPERLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...TTCAGGAGATACGAAAAGATGAAGGAGGTCCTGGAAGGTTTTCGAAAGAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAAACTCTAACTCCTCCTaGAGTTTCTGGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRNSNSS*SFWANT
Trigger: AGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTCTTTTCGTATCTCCTaGAGAGGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPSFRIS*RGQPET
Trigger: AGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCAGATCTGCAGAAACTaGCATCTTTGTCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCQICRN*HLCLRN
Trigger: GTTTCTGAGACAAAGATGTCAGTTTCTGCAGATCTG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTGGCAACTGGCTTCTTaGCTATCTTTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPWQLAS*LSFWWE
Trigger: CTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGAAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NQPYLERGHSSAYGSERRSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGCTTCTGGCTAGTGACTaGCAGCTTCTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPLLASD*QLLLIC
Trigger: ACAGATGAGGAGAAGCTGGCAGTCACTAGCCAGAAG...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTATAAGGTACAAGGCCTaGTTCTTCGGAGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPIRYKA*FFGVSS
Trigger: CGATGACACTCCGAAGAAGCAGGCCTTGTACCTTAT...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATATGCTGGAGCTTTGTTaGTGCATTCACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNMLELC*CIHKGF
Trigger: GAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCAT...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGTCCTCGATCATCTGTaGAATGGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKVLDHL*NGLLIF
Trigger: GAATATGAGAAGACCATTGCACAGATGATCGAGGAC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATAACCTGGGCAATCTCTaGATTGGCTCTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNNLGNL*IGSVQF
Trigger: AAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTT...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGTATCATTTTGCCCCTaGAAGAAAGGTGCAGGAACC +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPVSFCP*KKGAGT
Trigger: GGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATAC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR GCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTCTCTTTGTTGACCGTTaGTGGGCAATGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPLFVDR*WAMFPG
Trigger: ACCTGGAAACATTGCCCAGCAACGGTCAACAAAGAG...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAATCCTTAGGGGCATTTTaGCAACTGGCTTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKSLGAF*QLASCL
Trigger: TAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGA...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAGCTGCTGTACAGTTTaGTGGGAGATGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCSCCTV*WEMDFS
Trigger: AGAAAAATCCATCTCCCACCAAACTGTACAGCAGCT...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGAAATTCCTGGCAATTaGCCAGTGCGATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNEIPGN*PVRLED
Trigger: ATCCTCCAATCGCACTGGCCAATTGCCAGGAATTTC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAACCTCTGAGGGTGAATTaGATTTGGTCTCATTTACAA +
Preference number: 4 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKPLRVN*IWSHLQ
Trigger: TTGTAAATGAGACCAAATTCAATTCACCCTCAGAGG...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATTCTGCATATGGCAGATaGATTTCCACTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNSAYGR*ISTFCW
Trigger: CCAGCAGAAAGTGGAAATGCATCTGCCATATGCAGA...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CCA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: SNQPYLERGHSSAYGSERESSSS*QVYSTH
Trigger: ATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGGGCAGTTCTGCATATaGCAGATGCATTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNGQFCI*QMHFHF
Trigger: AAAGTGGAAATGCATCTGCCATATGCAGAACTGCCC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAGACTCTTGCATTTTTaGGGTGGAGGAAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKRLLHF*GGGKRV
Trigger: AACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR TCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAACTCTAACTCCTCCTaGAGTTTCTGGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKNSNSS*SFWANT
Trigger: AGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR GCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAGTTTGGGAGACTCTTaGATTTTTGAGGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKSLGDS*IFEVEE
Trigger: TTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAATTGTTGGGACAGTTTaGGAGACTCTTGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKIVGTV*ETLAFL
Trigger: CAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAAT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CCA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPCCTVW*EMDFSL
Trigger: GAGAGAAAAATCCATCTCCCACCAAACTGTACAGCA...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS GCA 90 bp AGTGGAGAACCTTCTGGGCCTCTGGCTTCCTGGGGGTGCTCCCCTTaGTCAGCCACCTCTGGAGACACAGTGCACGGGTCCAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SGEPSGPLASWGCSP*SATSGDTVHGSRLA
Trigger: TGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGTTCTCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp GATCTGGGCAGTGGAGAACCTTCTGGGCCTCTGGCTTCCTGGGGGTaGTCCCCTTGCTCAGCCACCTCTGGAGACACAGTGCACGGGTCC +
Preference number: 5 (lower is better)
Translates to: DLGSGEPSGPLASWG*SPCSATSGDTVHGS
Trigger: GGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGTTCTCCACTGCCCAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp GTTTCTCCAGCTGGCAGCAAGGCATCCCCGCAGCTGGGCTCAAGCTaGACAAGTTGGCGTGGCTCACTCAGGGTGGAGGCGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VSPAGSKASPQLGSS*TSWRGSLRVEARLW
Trigger: CCAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCGGGGATGCCTTGCTGCCAGCTGGAGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp AGACATCTGGTGGGTGAGCAGCTTCCCTCTTGGTGTCCTGGCGGCTaGGGGAAGCCAGGGCGATCTGCCTGGCCAGCTTCAGGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: RHLVGEQLPSWCPGG*GKPGRSAWPASGLL
Trigger: TAGAAGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGAAGCTGCTCACCCACCAGATGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 90 bp GCTTCCTCAGAGTCGGAACTCCTGGGTTCGTTCTTGGCCAGGTGTTaGGGGGAGGCAGTGGGGGTGACTTCTACTCCAGGACCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: ASSESELLGSFLARC*GEAVGVTSTPGPAA
Trigger: CGCAGCCGGTCCTGGAGTAGAAGTCACCCCCACTGCCTCCCCCCAACACCTGGCCAAGAACGAACCCAGGAGTTCCGACTCTGAGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
CDS CCA 90 bp TGGGCCTCTGGCTTCCTGGGGGTGCTCCCCTTGCTCAGCCACCTCTaGAGACACAGTGCACGGGTCCAGGCTGGCAACACTTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: WASGFLGVLPLLSHL*RHSARVQAGNTFRS
Trigger: GCTTCTGAAAGTGTTGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CCCAGGGCAGAGATGATCTGGGCAGTGGAGAACCTTCTGGGCCTCTaGCTTCCTGGGGGTGCTCCCCTTGCTCAGCCACCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: PRAEMIWAVENLLGL*LPGGAPLAQPPLET
Trigger: TGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGTTCTCCACTGCCCAGATCATCTCTGCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp AAGGGGGCCGGCTGCTCCATTTCCAGCTGTGGGGCCGACTCTTTCTaGCCCTCATCACAGGCCTCGCTCTCTAGGGCATCCTGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: KGAGCSISSCGADSF*PSSQASLSRASWVS
Trigger: ACTCACCCAGGATGCCCTAGAGAGCGAGGCCTGTGATGAGGGCCAGAAAGAGTCGGCCCCACAGCTGGAAATGGAGCAGCCGGCCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CAGCAAGGCATCCCCGCAGCTGGGCTCAAGCTGCACAAGTTGGCGTaGCTCACTCAGGGTGGAGGCGAGGCTCTGGTCAGCCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: QQGIPAAGLKLHKLA*LTQGGGEALVSLKE
Trigger: TTCCTTCAGGCTGACCAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCGGGGATGCCTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGCTCACTGACAACCCCTaGGCAGGCAAGTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: LLPQASLVGCLLLLGLAALTDNP*AGKSSC
Trigger: GCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAG...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGCCTGGTAGGCTGCTaGCTCTTGCTGGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPSLVGC*LLLGLA
Trigger: GGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCT...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS GCA 90 bp GCTTCCCTCTTGGTGTCCTGGCGGCTGCGGGAAGCCAGGGCGATCTaGCTGGCCAGCTTCAGGGCTTCTATCCGCATGACAGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: ASLLVSWRLREARAI*LASFRASIRMTANS
Trigger: AGAGTTTGCTGTCATGCGGATAGAAGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS GCA 90 bp CTTCCTGGGGGTGCTCCCCTTGCTCAGCCACCTCTGGAGACACAGTaGACGGGTCCAGGCTGGCAACACTTTCAGAAGCAGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LPGGAPLAQPPLETQ*TGPGWQHFQKQSRS
Trigger: GCTCCTGCTCTGCTTCTGAAAGTGTTGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CCCCTTGCTCAGCCACCTCTGGAGACACAGTGCACGGGTCCAGGCTaGCAACACTTTCAGAAGCAGAGCAGGAGCCTCCTAGCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: PLAQPPLETQCTGPG*QHFQKQSRSLLAQC
Trigger: GCACTGGGCTAGGAGGCTCCTGCTCTGCTTCTGAAAGTGTTGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CGCAGCTGGGCTCAAGCTGCACAAGTTGGCGTGGCTCACTCAGGGTaGAGGCGAGGCTCTGGTCAGCCTGAAGGAAGCCACTACTCAGAG +
Preference number: 5 (lower is better)
Translates to: RSWAQAAQVGVAHSG*RRGSGQPEGSHYSE
Trigger: CTCTGAGTAGTGGCTTCCTTCAGGCTGACCAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CTGCTGGCTATCGGCTTGTCTTCATCGAACACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTTCCTTCCACGGACTCGCTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LLAIGLSSSNTAEEE*EGRKGLPSTDSLLR
Trigger: TCGCAGCAGCGAGTCCGTGGAAGGAAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 90 bp GGACCCGATGCGGGAGTACAAGGCAGTTTTGGAGATGGAGACATCTaGTGGGTGAGCAGCTTCCCTCTTGGTGTCCTGGCGGCTGCGGGA +
Preference number: 5 (lower is better)
Translates to: GPDAGVQGSFGDGDI*WVSSFPLGVLAAAG
Trigger: TCCCGCAGCCGCCAGGACACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 90 bp AGAGATGATCTGGGCAGTGGAGAACCTTCTGGGCCTCTGGCTTCCTaGGGGTGCTCCCCTTGCTCAGCCACCTCTGGAGACACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: RDDLGSGEPSGPLAS*GCSPCSATSGDTVH
Trigger: GTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGTTCTCCACTGCCCAGATCATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CCTGAGTTCCCTGAACAGGCTCTCCAGTCCTCTCTCCTTCAACACTaGCACCTGGCCTGCTCTCCTCCAAGGCTGTCCCCACCAGACCCA +
Preference number: 5 (lower is better)
Translates to: PEFPEQALQSSLLQH*HLACSPPRLSPPDP
Trigger: TGGGTCTGGTGGGGACAGCCTTGGAGGAGAGCAGGCCAGGTGCCAGTGTTGAAGGAGAGAGGACTGGAGAGCCTGTTCAGGGAACTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CTGAAGAAGTCCTCTGTGGAGGGTCAGGGCTTGGAGGCCACAGGATaGTGTTGCGTGAAGCAGCGTCCTCCTGGTGGTCCGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: LKKSSVEGQGLEATG*CCVKQRPPGGPRCC
Trigger: ACAGCACCTCGGACCACCAGGAGGACGCTGCTTCACGCAACACCATCCTGTGGCCTCCAAGCCCTGACCCTCCACAGAGGACTTCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGGGGCTGGTGGAGCTTaGACAGGGGTCGTTGACTCG +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHGAGGA*TGVVDS
Trigger: CGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGGGCCCAGCTGTTGCTaGGCTTGCTGGTCTTCAACC +
Preference number: 5 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRGPSCC*ACWSST
Trigger: GGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCCC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS GCA 90 bp GCGATCTCAGAGGGCCTGGCATTTGCTTCTGGAGCAGCAGCCACATaGATCTCCCTTGCCATCTGCTCGTCTCTGACCGGGAGAGGCATC +
Preference number: 5 (lower is better)
Translates to: AISEGLAFASGAAAT*ISLAICSSLTGRGI
Trigger: GATGCCTCTCCCGGTCAGAGACGAGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TTCCACGGACTCGCTGCTGCGAGGGCCATCGGGAACCACAACCGGTaGCTCAGAAATGCATCCTGGTTCTTCTGGGGCTGGTGGATCGAT +
Preference number: 5 (lower is better)
Translates to: FHGLAAARAIGNHNR*LRNASWFFWGWWID
Trigger: ATCGATCCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGGTTGTGGTTCCCGATGGCCCTCGCAGCAGCGAGTCCGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 90 bp CCACCTCGGTGGACCCGATGCGGGAGTACAAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAGCAGCTTCCCTCTTGGTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PPRWTRCGSTRQFWR*RHLVGEQLPSWCPG
Trigger: GCCAGGACACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 90 bp GCCAAAGGAGCAGGACTTGCACGGGCAGCAGATGGGGAGGCGCTCTaGACTGTCAGATGTGTAGAGACTGAGCTGACAGCGTCACCATGG +
Preference number: 5 (lower is better)
Translates to: AKGAGLARAADGEAL*TVRCVETELTASPW
Trigger: CCATGGTGACGCTGTCAGCTCAGTCTCTACACATCTGACAGTCCAGAGCGCCTCCCCATCTGCTGCCCGTGCAAGTCCTGCTCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
CDS CCA 90 bp CTGCTGCATCCTCACTGGCAGGGCATGCTGCGATCTCAGAGGGCCTaGCATTTGCTTCTGGAGCAGCAGCCACATGCATCTCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LLHPHWQGMLRSQRA*HLLLEQQPHASPLP
Trigger: TGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCCAGTGAGGATGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp TCTGTAAGAGCGGTGGCTGCTGCAGGAGGCGGGATCTCTGAGAGCTaGCTACTGCTGCCTGTGCCCTCTTGCTCATTTCCCCCTAGTGCA +
Preference number: 5 (lower is better)
Translates to: SVRAVAAAGGGISES*LLLPVPSCSFPPSA
Trigger: TGCACTAGGGGGAAATGAGCAAGAGGGCACAGGCAGCAGTAGTCAGCTCTCAGAGATCCCGCCTCCTGCAGCAGCCACCGCTCTTACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp GTCAGCCTGAAGGAAGCCACTACTCAGAGCAGGTTCTGGTGCCTCTaGAGCCTGCTGCATCCCGGGGTCTCCTTCACTGGCATCGACGTT +
Preference number: 5 (lower is better)
Translates to: VSLKEATTQSRFWCL*SLLHPGVSFTGIDV
Trigger: AACGTCGATGCCAGTGAAGGAGACCCCGGGATGCAGCAGGCTTCAGAGGCACCAGAACCTGCTCTGAGTAGTGGCTTCCTTCAGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp GGAGAAGAGATACTCGGCTTCCCATGCCCTACAGGAGTAGGGAGCTaGGGGCCCAGCTGTTGCTTGGCTTGCTGGTCTTCAACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GEEILGFPCPTGVGS*GPSCCLACWSSTWL
Trigger: CAGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCTGTAGGGCATGGGAAGCCGAGTATCTCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp AGGCCCGAGTCCCCACAACGTGCTTCTTCACGCAGGCTGCCTATTTaGAAAGCATCATCCAGCTCCTGTTGGGACTTGCTCAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: RPESPQRASSRRLPI*KASSSSCWDLLSPC
Trigger: GCAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAGCACGTTGTGGGGACTCGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp ATCCTCACTGGCAGGGCATGCTGCGATCTCAGAGGGCCTGGCATTTaGTTCTGGAGCAGCAGCCACATGCATCTCCCTTGCCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: ILTGRACCDLRGPGI*FWSSSHMHLPCHLL
Trigger: GAGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCCAGTGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CGAGGCCCAGTGCCCTCTCCAGACAGCAGCTCTGTCCTTGGCTCCTaGAGAGGAACTAGGGAAATTCCTGGCAATTGGCCAGTGCGATTG +
Preference number: 5 (lower is better)
Translates to: RGPVPSPDSSSVLGS*RGTREIPGNWPVRL
Trigger: CAATCGCACTGGCCAATTGCCAGGAATTTCCCTAGTTCCTCTCCAGGAGCCAAGGACAGAGCTGCTGTCTGGAGAGGGCACTGGGCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GTGGGCCTGAAACAGTGTGCTGTGTCAGAACGTCCACAGAACTTCTaGGCATCCCGTCTGTTTCTCCAGCTGGCAGCAAGGCATCCCCGC +
Preference number: 5 (lower is better)
Translates to: VGLKQCAVSERPQNF*ASRLFLQLAARHPR
Trigger: GCGGGGATGCCTTGCTGCCAGCTGGAGAAACAGACGGGATGCCCAGAAGTTCTGTGGACGTTCTGACACAGCACACTGTTTCAGGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp ACTGGCAGGGCATGCTGCGATCTCAGAGGGCCTGGCATTTGCTTCTaGAGCAGCAGCCACATGCATCTCCCTTGCCATCTGCTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: TGRACCDLRGPGICF*SSSHMHLPCHLLVS
Trigger: AGAGACGAGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TCCCTGAACAGGCTCTCCAGTCCTCTCTCCTTCAACACTGGCACCTaGCCTGCTCTCCTCCAAGGCTGTCCCCACCAGACCCATCATCTT +
Preference number: 5 (lower is better)
Translates to: SLNRLSSPLSFNTGT*PALLQGCPHQTHHL
Trigger: AAGATGATGGGTCTGGTGGGGACAGCCTTGGAGGAGAGCAGGCCAGGTGCCAGTGTTGAAGGAGAGAGGACTGGAGAGCCTGTTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TCAAAGGCTTCCTCAGAGTCGGAACTCCTCTTTCCGGAGCTTTCCTaGGCAGCTTGCAGCCTGGACTCCCCATTGCTGCTCATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SKASSESELLFPELS*AACSLDSPLLLMAA
Trigger: GGCAGCCATGAGCAGCAATGGGGAGTCCAGGCTGCAAGCTGCCCAGGAAAGCTCCGGAAAGAGGAGTTCCGACTCTGAGGAAGCCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239258.2
CDS-3UTR CAA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAAGCCTGGTAGGCTGCTaGCTCTTGCTGGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQSLVGC*LLLGLA
Trigger: GGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCT...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS TCA 90 bp CAGCTAAGGGTGGGTGTCCCGGGTCAACAGGAGCAGCTGGCTGGATaGCATCATCAGTTCCAGGGATACTTCCAGCACACGATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: QLRVGVPGQQEQLAG*HHQFQGYFQHTIQA
Trigger: TGCCTGGATCGTGTGCTGGAAGTATCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGACCCGGGACACCCACCCTTAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS TCA 90 bp GGGCTGCCTTTGGAGGGAAGCTCTGACCCCTGCTCGTTTCCTCCTTaGGTGGACAAGCTCACATCTGCCCAAGGCTTCCTTTCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GLPLEGSSDPCSFPP*VDKLTSAQGFLSSG
Trigger: ACCTGAGGAAAGGAAGCCTTGGGCAGATGTGAGCTTGTCCACTCAAGGAGGAAACGAGCAGGGGTCAGAGCTTCCCTCCAAAGGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp GGAGGTCACCAGACGCACATGCCCACGTCTCAGCCCTGCTTGGTGTaGCATCACCTTCTGCTTCCTCAGCAGCTCTTGCCATTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GGHQTHMPTSQPCLV*HHLLLPQQLLPFCW
Trigger: CCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCGTCTGGTGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp AGTTCGCTTAAGGGTGCTGGAAGCACTGTTGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCCAGCTTCAGGGCTGCCGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSLKGAGSTVGSCAT*ICGKGPSFRAAGAR
Trigger: TCTTGCCCCGGCAGCCCTGAAGCTGGGACCCTTACCACAGATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCACCCTTAAGCGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS GCA 90 bp CGCACATGCCCACGTCTCAGCCCTGCTTGGTGTGACATCACCTTCTaGTTCCTCAGCAGCTCTTGCCATTTTGCTGGGATCCAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: RTCPRLSPAWCDITF*FLSSSCHFAGIQGS
Trigger: ACTCCCCTGGATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp ATCGGGAACCACAACCGGTGGCTCAGAAATGCATCCTGGTTCTTCTaGGGCTGGTGGATCGATGACCTCAGGCTCTGGGGTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: IGNHNRWLRNASWFF*GWWIDDLRLWGDFR
Trigger: CCTGAAGTCACCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGGTTGTGGTTCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 90 bp CCACCAGCTCGATGCTGTCGAAGTCTAAGTTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCATCGAACACCGCCGAGGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PPARCCRSLSCKSRC*LSACLHRTPPRRSG
Trigger: CCCACTCCTCCTCGGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACAACTTAGACTTCGACAGCATCGAGCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 90 bp GCTCAGTTCCCGATGTCCCTGTCTGTGGTTGCCTCTGAGCATCGCTaGTGTCCAGAGTCTCTTTCCAGGAGCCACTGTTTGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AQFPMSLSVVASEHR*CPESLSRSHCLLVL
Trigger: CAGCACCAGCAAACAGTGGCTCCTGGAAAGAGACTCTGGACACCAGCGATGCTCAGAGGCAACCACAGACAGGGACATCGGGAACTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GACTTCCTGTCCAGGTTCAACCTTCTCCACCCCACAAGGTTGGCCTaGGGACATCAGCAAGCCTTCCCCATCACAGCTGAAAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: DFLSRFNLLHPTRLA*GHQQAFPITAERRM
Trigger: CATCCGCCTTTCAGCTGTGATGGGGAAGGCTTGCTGATGTCCCCAGGCCAACCTTGTGGGGTGGAGAAGGTTGAACCTGGACAGGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTACTCACTGACAACCCCTaGGCAGGCAAGTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: CSSVLSRASTRSCSFRRLLTDNP*AGKSSC
Trigger: GCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAG...TAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS TCA 90 bp AGGCACTGGGTCTGGAGAGTAGTGTGCTGTATCCAGGAGAGCTACTaGGTCAGGTGGACAGGGCAGGGCCTCCACTCTGTTTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: RHWVWRVVCCIQESY*VRWTGQGLHSVSTC
Trigger: GCAAGTAGAAACAGAGTGGAGGCCCTGCCCTGTCCACCTGACTCAGTAGCTCTCCTGGATACAGCACACTACTCTCCAGACCCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp CTGAAGGTAAAGTGGCCGGGCCAGGCCCTGGGCTCTTTCTGTCACTaGGGAGTTCTTCTGGAGCCACCAGGTGCAGCTTTTCATCTTTGC +
Preference number: 5 (lower is better)
Translates to: LKVKWPGQALGSFCH*GVLLEPPGAAFHLC
Trigger: GCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGAAAGAGCCCAGGGCCTGGCCCGGCCACTTTACCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207918.2
CDS GCA 90 bp CGGCAGAGCACGGCTCCAAGCTCTGGAAGTTATCCACCAGCTCGATaGTGTCGAAGTCTAAGTTGTAAGTCCCGCTGCTGGCTATCGGCT +
Preference number: 5 (lower is better)
Translates to: RQSTAPSSGSYPPAR*CRSLSCKSRCWLSA
Trigger: AGCCGATAGCCAGCAGCGGGACTTACAACTTAGACTTCGACAGCATCGAGCTGGTGGATAACTTCCAGAGCTTGGAGCCGTGCTCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS GCA 90 bp AGGCAGTACGTCACCGGCTTCAGAAAGGCCCGAGTCCCCACAACGTaGTTCTTCACGCAGGCTGCCTATTTGCAAAGCATCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RQYVTGFRKARVPTT*FFTQAAYLQSIIQL
Trigger: GAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAGCACGTTGTGGGGACTCGGGCCTTTCTGAAGCCGGTGACGTACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCCTGCTGGCTATCGGCTaGTCTTCATCGAACACCGCC +
Preference number: 5 (lower is better)
Translates to: VHALGPELAFSHLGDQLVLLAIG*SSSNTA
Trigger: GGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAG...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: QLSRRSYCTQRPSPRTWPGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...GGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS TCA 90 bp TTCCACTTTCTGCTGGCAGCTTTCCTGGGAGGCAGTGCTTGTCCCTaGTCCAGGGATAGCTCTGGAGTTGCTTTTAGAGGGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: FHFLLAAFLGGSACP*SRDSSGVAFRGMAA
Trigger: GGCTGCCATCCCTCTAAAAGCAACTCCAGAGCTATCCCTGGATCAGGGACAAGCACTGCCTCCCAGGAAAGCTGCCAGCAGAAAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp CTCCTCTCGTGCTTCCATCTTCTGCATCCTTCCTGGCAGCACTATTaGTATGCAGGTAAGGGGTGTCAGGTGGTTCAGCCGGCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLSCFHLLHPSWQHY*YAGKGCQVVQPAEG
Trigger: GCCTTCTGCCGGCTGAACCACCTGACACCCCTTACCTGCATATCAATAGTGCTGCCAGGAAGGATGCAGAAGATGGAAGCACGAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp CCTGCTCTCCTCCAAGGCTGTCCCCACCAGACCCATCATCTTCTCTaGTGCTGGATCCTGGGGTACTTGATGAGAACTCTCAGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: PALLQGCPHQTHHLL*CWILGYLMRTLSLN
Trigger: GTTGAGGCTGAGAGTTCTCATCAAGTACCCCAGGATCCAGCATCAGAGAAGATGATGGGTCTGGTGGGGACAGCCTTGGAGGAGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp GGCTGGCAACACTTTCAGAAGCAGAGCAGGAGCCTCCTAGCCCAGTaGTTCCAGCACACGATCCAGGCAAGTCTCCTTGTTGCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: GWQHFQKQSRSLLAQ*FQHTIQASLLVASV
Trigger: TACAGAAGCAACAAGGAGACTTGCCTGGATCGTGTGCTGGAAGCACTGGGCTAGGAGGCTCCTGCTCTGCTTCTGAAAGTGTTGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp ACCATCTCGTTCCTCTGCTTTCTGGAAACTTCCAAGAGGACTCTGTaGTTCTGTACCCAAGGGGGCCGGCTGCTCCATTTCCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: TISFLCFLETSKRTL*FCTQGGRLLHFQLW
Trigger: CCACAGCTGGAAATGGAGCAGCCGGCCCCCTTGGGTACAGAAGCACAGAGTCCTCTTGGAAGTTTCCAGAAAGCAGAGGAACGAGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp TCCGGGGTCCTCAGAGGAAACGGCTCCTCTCGTGCTTCCATCTTCTaGATCCTTCCTGGCAGCACTATTGATATGCAGGTAAGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SGVLRGNGSSRASIF*ILPGSTIDMQVRGV
Trigger: GACACCCCTTACCTGCATATCAATAGTGCTGCCAGGAAGGATGCAGAAGATGGAAGCACGAGAGGAGCCGTTTCCTCTGAGGACCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp CCTGAACAGCTGCAGAAGAGGGAAGGCCCACTGTTAATTCCTGCCTaGTTCTTGCCTGCTGTGAGTGAGCCTGAGTTCCCTGAACAGGCT +
Preference number: 5 (lower is better)
Translates to: PEQLQKREGPLLIPA*FLPAVSEPEFPEQA
Trigger: AGCCTGTTCAGGGAACTCAGGCTCACTCACAGCAGGCAAGAAGCAGGCAGGAATTAACAGTGGGCCTTCCCTCTTCTGCAGCTGTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp AGCCCTGCTTGGTGTGACATCACCTTCTGCTTCCTCAGCAGCTCTTaGCATTTTGCTGGGATCCAGGGGAGTAGTCAACACTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPAWCDITFCFLSSS*HFAGIQGSSQHSSS
Trigger: GCTGGAGGAGTGTTGACTACTCCCCTGGATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TTCTGGCAGCCATTGAGTGCTGTGTGGGGCCATCTACTTCAGGAGTaGATGTCGGTAAGATGTTCCCTGGGATGTTGGGGGAGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: FWQPLSAVWGHLLQE*MSVRCSLGCWGRVP
Trigger: TGGAACCCTCCCCCAACATCCCAGGGAACATCTTACCGACATCCACTCCTGAAGTAGATGGCCCCACACAGCACTCAATGGCTGCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GTTGCTGACTCTGGGGAGGGACAGTCATCCATATCCTCTTTCCTTTaGAACTCAAAGTCACGAGGCCCAGTGCCCTCTCCAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: VADSGEGQSSISSFL*NSKSRGPVPSPDSS
Trigger: GCTGCTGTCTGGAGAGGGCACTGGGCCTCGTGACTTTGAGTTCCAAAGGAAAGAGGATATGGATGACTGTCCCTCCCCAGAGTCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CACACAGACAACTTGCTGGAGCTCAGTTCCCGATGTCCCTGTCTGTaGTTGCCTCTGAGCATCGCTGGTGTCCAGAGTCTCTTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: HTDNLLELSSRCPCL*LPLSIAGVQSLFPG
Trigger: TCCTGGAAAGAGACTCTGGACACCAGCGATGCTCAGAGGCAACCACAGACAGGGACATCGGGAACTGAGCTCCAGCAAGTTGTCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TGCCCCCTAGGGACAGTATTCTCCAAGGCAAGGTGTGGGTCTGGCTaGCCACCGAGTTGCTTACCCTCTGAGGGTGAATTGAATTTGGTC +
Preference number: 5 (lower is better)
Translates to: CPLGTVFSKARCGSG*PPSCLPSEGELNLV
Trigger: GACCAAATTCAATTCACCCTCAGAGGGTAAGCAACTCGGTGGCCAGCCAGACCCACACCTTGCCTTGGAGAATACTGTCCCTAGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR CAA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GCCTGGTACCTCTGTTCCTCTTTCTTCACTCGGGATAGGTACTCCTGCGCACATTTCACCTGGTTCCTGTaGGGTCTCCTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: AWYLCSSFFTRDRYSCAHFTWFL*GLLHWG
Trigger: CCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAA...ATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CTCCTTCCGCAGGCTAGCCTGGTAGGCTGCTTGCTCTTGCTGGGCCTTGCCGCGTCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: LLPQASLVGCLLLLGLAASSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...CGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPREYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS GCA 90 bp TATCCACCAGCTCGATGCTGTCGAAGTCTAAGTTGTAAGTCCCGCTaGTGGCTATCGGCTTGTCTTCATCGAACACCGCCGAGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: YPPARCCRSLSCKSR*WLSACLHRTPPRRS
Trigger: ACTCCTCCTCGGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACAACTTAGACTTCGACAGCATCGAGCTGGTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS GCA 90 bp CATCCATATCCTCTTTCCTTTGGAACTCAAAGTCACGAGGCCCAGTaGCCTCTCCAGACAGCAGCTCTGTCCTTGGCTCCTGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: HPYPLSFGTQSHEAQ*PLQTAALSLAPGEE
Trigger: TTCCTCTCCAGGAGCCAAGGACAGAGCTGCTGTCTGGAGAGGGCACTGGGCCTCGTGACTTTGAGTTCCAAAGGAAAGAGGATATGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp CCATCTGATGCTGAGGACAGGATGGGGTCCTCCTCATGGAGTTTGTaGAGTGAGGTAGCTGTGTCAGTCACATGGGATTCAGCAACCACC +
Preference number: 5 (lower is better)
Translates to: PSDAEDRMGSSSWSL*SEVAVSVTWDSATT
Trigger: GGTGGTTGCTGAATCCCATGTGACTGACACAGCTACCTCACTGCACAAACTCCATGAGGAGGACCCCATCCTGTCCTCAGCATCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CCTGAGGGCAGTTCTGCATATGGCAGATGCATTTCCACTTTCTGCTaGCAGCTTTCCTGGGAGGCAGTGCTTGTCCCTGATCCAGGGATA +
Preference number: 5 (lower is better)
Translates to: PEGSSAYGRCISTFC*QLSWEAVLVPDPGI
Trigger: TATCCCTGGATCAGGGACAAGCACTGCCTCCCAGGAAAGCTGCCAGCAGAAAGTGGAAATGCATCTGCCATATGCAGAACTGCCCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp ACTTCTCTTCATCATGGTTCCCAGGCTCTGCACCAGCAAGGGCTCTaGTGGCTTCTTGCTGTCCCTCAAGGTTGTCTCCATGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: TSLHHGSQALHQQGL*WLLAVPQGCLHVIC
Trigger: GCAGATCACATGGAGACAACCTTGAGGGACAGCAAGAAGCCACCAGAGCCCTTGCTGGTGCAGAGCCTGGGAACCATGATGAAGAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TCTTCACGCAGGCTGCCTATTTGCAAAGCATCATCCAGCTCCTGTTaGGACTTGCTCAGCCCCTGCCCAGTAGAGAGACTATCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SSRRLPICKASSSSC*DLLSPCPVERLSFP
Trigger: TGGGAAGGATAGTCTCTCTACTGGGCAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GGACCCTCAAACAGCACATTCCTTGGAACTCCTGACTTTTTACTATaGGGCCGGTCAGCAGCCAGGGCTCCAAGCACAGACTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GPSNSTFLGTPDFLL*GRSAARAPSTDCSK
Trigger: CTTTGAGCAGTCTGTGCTTGGAGCCCTGGCTGCTGACCGGCCCCATAGTAAAAAGTCAGGAGTTCCAAGGAATGTGCTGTTTGAGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TTCAAGGAGGTCACCAGACGCACATGCCCACGTCTCAGCCCTGCTTaGTGTGACATCACCTTCTGCTTCCTCAGCAGCTCTTGCCATTTT +
Preference number: 5 (lower is better)
Translates to: FKEVTRRTCPRLSPA*CDITFCFLSSSCHF
Trigger: AAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCGTCTGGTGACCTCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGGGGCTGGTGGAGCTTaGACAGGGGTCGTTGACTCG +
Preference number: 5 (lower is better)
Translates to: PRPRPAICSLLENLTVSLGAGGA*TGVVDS
Trigger: CGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAACTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGAGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACCAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: RPRPRPAICSLLENLTVSVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: PRPRPAICSLLENLTVSLVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCGTGGCTGCAGTGACCTaGGACTCTGAACTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VHALGPELAFSHLGDQLVVAAVT*DSELKK
Trigger: CTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGCCAC...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS-3UTR CAA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTGGGGGTGCTCCCCTaGCTCAGCCACCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLGVLP*LSHLWR
Trigger: TCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATTGGGGGCATCCTGGTaGCCCAGCATATTTTGCATG +
Preference number: 5 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQLGASW*PSIFCM
Trigger: CATGCAAAATATGCTGGGCAACCAGGATGCCCCCAA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS TCA 90 bp AAGCCAGGGCGATCTGCCTGGCCAGCTTCAGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCTCCTGAAGTTTCTGGGCAAATACTG +
Preference number: 5 (lower is better)
Translates to: KPGRSAWPASGLLSA*QQTLTPPEVSGQIL
Trigger: CAGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS TCA 90 bp GGTAAGATGTTCCCTGGGATGTTGGGGGAGGGTTCCATCCTAAGGTaGTTTGTCAGGGTGCTGTCTTCAGGAGCTTCTGCTTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GKMFPGMLGEGSILR*FVRVLSSGASASEL
Trigger: CAGCTCAGAAGCAGAAGCTCCTGAAGACAGCACCCTGACAAATCACCTTAGGATGGAACCCTCCCCCAACATCCCAGGGAACATCTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp GATACCGATACTATTACCATCCCCCGCTGCAGAGATGTCCCCATCTaGAGTTCCTGGTTGCAAGACTGTGGTGAAGGAGACAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: DTDTITIPRCRDVPI*SSWLQDCGEGDSRC
Trigger: ACACCTGCTGTCTCCTTCACCACAGTCTTGCAACCAGGAACTGCAGATGGGGACATCTCTGCAGCGGGGGATGGTAATAGTATCGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp AAGCATCCTTGTAGTACCTGTTTCAAGGAGGTCACCAGACGCACATaGCCACGTCTCAGCCCTGCTTGGTGTGACATCACCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KHPCSTCFKEVTRRT*PRLSPAWCDITFCF
Trigger: GAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCGTCTGGTGACCTCCTTGAAACAGGTACTACAAGGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp CCTGGGCTCTTTCTGTCACTGAGGAGTTCTTCTGGAGCCACCAGGTaGAGCTTTTCATCTTTGCTCTCATCAGGCTCTGGAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PGLFLSLRSSSGATR*SFSSLLSSGSGGEE
Trigger: CTCTTCTCCTCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGAAAGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207918.2
CDS CCA 90 bp TGGAGTGGGGTCCTGAGAAGGCGGGTCAGACAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAACGTGTCAAACAGAGAACACACAGA +
Preference number: 5 (lower is better)
Translates to: WSGVLRRRVRQRRPL*RLLHPKRVKQRTHR
Trigger: TCTGTGTGTTCTCTGTTTGACACGTTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTGTCTGACCCGCCTTCTCAGGACCCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGCTCCAGCGTTCTTTCCAGAGCATCCACTCGAAGCTGCTCCTTCCGCAGGCTAGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CSSVLSRASTRSCSFRRLGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...TAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGAACGCTGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPREYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAATGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: SLVATVVAIWQWFALLFLVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCCTGGTAGGCTGCTaGCTCTTGCTGGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: SIVHSLRQESRCICSRPISLVGC*LLLGLA
Trigger: GGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCT...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAAGCCTGGTAGGCTGCTaGCTCTTGCTGGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIRSLVGC*LLLGLA
Trigger: GGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCT...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACTTGGCCCAGACAGAAACTGACATCTTaGTCTCAGAAACAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LSRRSYCTQRPSPRTWPRQKLTS*SQKQSL
Trigger: CAGAGACTGTTTCTGAGACAAAGATGTCAGTTTCTG...TCTGGGCCAAGTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACCTTGCTGTGAAAGGCTaGAGACTTCTCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHLAVKG*RLLFIM
Trigger: CATGATGAAGAGAAGTCTCAAGCCTTTCACAGCAAG...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS GCA 90 bp TGGGAGAAAGTTGGCAGCAACAGCCCTTGTTGGACTGTATCATTTTaGCCCTGCAAGAAAGGTGCAGGAACCTGCTGGAGGCTACCTTCT +
Preference number: 5 (lower is better)
Translates to: WEKVGSNSPCWTVSF*PCKKGAGTCWRLPS
Trigger: AGAAGGTAGCCTCCAGCAGGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATACAGTCCAACAAGGGCTGTTGCTGCCAACTTTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp GTTCCAGGGATACTGTCACTGAGGAGTTCTTCTGGAGCCACCAGGTaGAGCTTTTCATCTTTGCTCTCATCAGGCTCTGGAGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: VPGILSLRSSSGATR*SFSSLLSSGSGGEE
Trigger: CTCTTCTCCTCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGTATCCCTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS CCA 90 bp AGATGGCTGGAGACGGTTCTTTGGAGATGGTGGGAGACTGTCCTCTaGGCAAGACAGTTTTCTCTGACAGTCTTGTTCCAGACTGAGCAC +
Preference number: 5 (lower is better)
Translates to: RWLETVLWRWWETVL*ARQFSLTVLFQTEH
Trigger: GTGCTCAGTCTGGAACAAGACTGTCAGAGAAAACTGTCTTGCCCAGAGGACAGTCTCCCACCATCTCCAAAGAACCGTCTCCAGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CTTTATCCTTGGGTGATGAACTTGGAGTATTGCATGGGCTGCCTTTaGAGGGAAGCTCTGACCCCTGCTCGTTTCCTCCTTGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: LYPWVMNLEYCMGCL*REALTPARFLLEWT
Trigger: TGTCCACTCAAGGAGGAAACGAGCAGGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCAATACTCCAAGTTCATCACCCAAGGATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TTCACTTCGGCAGATCCACCTTTACCATCTCGTTCCTCTGCTTTCTaGAAACTTCCAAGAGGACTCTGTGCTTCTGTACCCAAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: FTSADPPLPSRSSAF*KLPRGLCASVPKGA
Trigger: GGCCCCCTTGGGTACAGAAGCACAGAGTCCTCTTGGAAGTTTCCAGAAAGCAGAGGAACGAGATGGTAAAGGTGGATCTGCCGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GCCAGGGCTTGCTCCTTCTCCAGGACCAGCTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTCTGTTCGTCCGATCATCTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: ARACSFSRTSCCTVW*EMDFSLCSSDHLCN
Trigger: ATTGCACAGATGATCGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCAAGCCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGGGGCTGGTGGAGCTTaGACAGGGGTCGTTGACTCG +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCGAGGA*TGVVDS
Trigger: CGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCGGGGCTGGTGGAGCTTaGACAGGGGTCGTTGACTCG +
Preference number: 5 (lower is better)
Translates to: QPYLERGHSSAYGSERRRGAGGA*TGVVDS
Trigger: CGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCC...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: KDKQLSRRSYCTQRPSPRVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...GCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCAGCCTGGTAGGCTGCTaGCTCTTGCTGGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QPYLERGHSSAYGSERRRSLVGC*LLLGLA
Trigger: GGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCT...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGGGTTCTGGCAGCCATaGAGTGCTGTGTGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: SIVHSLRQESRCICSRPIGFWQP*SAVWGH
Trigger: ATGGCCCCACACAGCACTCAATGGCTGCCAGAACCC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTTGCATGGGCTGCCTTaGGAGGGAAGCTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVLHGLP*EGSSDP
Trigger: GGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCAA...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAGCTCCTGTTGGGACTaGCTCAGCCCCTGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: LENLTVSLIQELRGQLAMSSCWD*LSPCPV
Trigger: TACTGGGCAGGGGCTGAGCAAGTCCCAACAGGAGCT...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp GGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAACGGCCAAGTCCACGCACCAAACAGCACATTCCTaGGAACTCCTGACTTTTTAC +
Preference number: 5 (lower is better)
Translates to: GQTVEPTLVLHATAKSTHQTAHS*ELLTFY
Trigger: GTAAAAAGTCAGGAGTTCCAAGGAATGTGCTGTTTG...GTGCGTGGACTTGGCCGTTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS TCA 90 bp CAAGCTCACATCTGCCCAAGGCTTCCTTTCCTCAGGTACCAGGATTaGGGAAGGATCTGTACTCTGCTTCTTCAGACCTGGGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: QAHICPRLPFLRYQD*GRICTLLLQTWVTL
Trigger: CAAAGTGACCCAGGTCTGAAGAAGCAGAGTACAGATCCTTCCTCAATCCTGGTACCTGAGGAAAGGAAGCCTTGGGCAGATGTGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp TGGGGGCATCCTGGTTGCCCAGCATATTTTGCATGTTTGCAGTACTaGCAGCAGCTTCAATCTGTCTGTCACCCTCAAGTGTGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: WGHPGCPAYFACLQY*QQLQSVCHPQVWKG
Trigger: TCCCTTCCACACTTGAGGGTGACAGACAGATTGAAGCTGCTGTCAGTACTGCAAACATGCAAAATATGCTGGGCAACCAGGATGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GCTTTGGAGACTTCTTCACCGTCTTTAGTGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCATCCCCATCCGCTTCCGTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ALETSSPSLVESSSS*QVYSTHPHPLPWCW
Trigger: CCAGCACCACGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGGTGAAGAAGTCTCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTGCTGGCTATCGGCTaGTCTTCATCGAACACCGCC +
Preference number: 5 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLLAIG*SSSNTA
Trigger: GGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 5 (lower is better)
Translates to: PRPRPAICSLLENLTVSLVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATTCACCTGGTTCCTGTaGGGTCTCCTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIRFTWFL*GLLHWG
Trigger: CCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACTCACTGACAACCCCTaGGCAGGCAAGTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIRLTDNP*AGKSSC
Trigger: GCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GTCCACGCACTTGGCCCAGAGTTAGCTTTTTCCCATCTTGGCGATCAGCTCGTCGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: VHALGPELAFSHLGDQLVGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...GACGAGCTGATCGCCAAGATGGGAAAAAGCTAACTCTGGGCCAAGTGCGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAATGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGTTCTTAGCCTGGTAGGCTGCTaGCTCTTGCTGGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: YSSRHMAMVCPSLSRTVLSLVGC*LLLGLA
Trigger: GGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCT...AAGAACTGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACCAGCAGGGGCTTTGGTaGCTGACTCTGGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYQQGLW*LTLGRD
Trigger: GTCCCTCCCCAGAGTCAGCAACCAAAGCCCCTGCTG...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGTATTCTTGGGGGCCTaGGGACCATCAGTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RPRPRPAICSLLENLTVSVFLGA*GPSVGS
Trigger: GGAACCAACTGATGGTCCCAAGGCCCCCAAGAATAC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTCCATCTCCCCAGCTTaGGGTACCTCCTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSISPA*GTSSAA
Trigger: AGCTGCGGAGGAGGTACCCAAAGCTGGGGAGATGGA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGCTCCACCCCACAAGGTaGGCCTGGGGACATCAGCAA +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTLHPTR*AWGHQQ
Trigger: TTGCTGATGTCCCCAGGCCAACCTTGTGGGGTGGAG...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGATCATCCAGCTCCTGTaGGGACTTGCTCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LENLTVSLIQELRGQLAMIIQLL*GLAQPL
Trigger: CAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGAT...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGATTCCTGCCTGCTTCTaGCCTGCTGTGAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMIPACF*PAVSEP
Trigger: AGGCTCACTCACAGCAGGCAAGAAGCAGGCAGGAAT...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CCGATGCATATGTTCACGTCCCATCAGATGCTGCTCGCCAAAGGCCAAGGCCAAGTTGCCCAGCATATTTaGCATGTTTGCAGTACTGAC +
Preference number: 5 (lower is better)
Translates to: PMHMFTSHQMLLAKGQGQVAQHI*HVCSTD
Trigger: GTCAGTACTGCAAACATGCAAAATATGCTGGGCAAC...TTGGCCTTGGCCTTTGGCGAGCAGCATCTGATGGGACGTGAACATATGCATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGCTGAGGGCCCAGCTGTaGCTTGGCTTGCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KPNQQMWINCTLLKARVPLRAQL*LGLLVF
Trigger: GAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAG...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS GCA 90 bp TTGGCTCCTGGAGAGGAACTAGGGAAATTCCTGGCAATTGGCCAGTaGGATTGGAGGATGAATTTGGTCCCTCTTCCTTCAGCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LAPGEELGKFLAIGQ*DWRMNLVPLPSALC
Trigger: ACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATCGCACTGGCCAATTGCCAGGAATTTCCCTAGTTCCTCTCCAGGAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CCTGGAGAGGAACTAGGGAAATTCCTGGCAATTGGCCAGTGCGATTaGAGGATGAATTTGGTCCCTCTTCCTTCAGCTCTTTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: PGEELGKFLAIGQCD*RMNLVPLPSALCLL
Trigger: AAGGAGACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATCGCACTGGCCAATTGCCAGGAATTTCCCTAGTTCCTCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp CTGATGTTGGCTTCCGTTCTGCCACCCCTGTATCCATCTGTTCTGTaGCAGCCAGATCTGCAGAAACTGACATCTTTGTCTCAGAAACAG +
Preference number: 5 (lower is better)
Translates to: LMLASVLPPLYPSVL*QPDLQKLTSLSQKQ
Trigger: CTGTTTCTGAGACAAAGATGTCAGTTTCTGCAGATCTGGCTGCCACAGAACAGATGGATACAGGGGTGGCAGAACGGAAGCCAACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp GATGACATCATCAGTTCCAGGGATACTGTCACTGAGGAGTTCTTCTaGAGCCACCAGGTGCAGCTTTTCATCTTTGCTCTCATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DDIISSRDTVTEEFF*SHQVQLFIFALIRL
Trigger: GAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGTATCCCTGGAACTGATGATGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS CCA 90 bp CTTGCTCCTTCTCCAGGACCAGCTGCTGTACAGTTTGGTGGGAGATaGATTTTTCTCTCTGTTCGTCCGATCATCTGTGCAATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LAPSPGPAAVQFGGR*IFLSVRPIICAMVF
Trigger: GAAGACCATTGCACAGATGATCGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGGGGCTGGTGGAGCTTaGACAGGGGTCGTTGACTCG +
Preference number: 5 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKGAGGA*TGVVDS
Trigger: CGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTCTGCTGGCTATCGGCTaGTCTTCATCGAACACCGCC +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCLLAIG*SSSNTA
Trigger: GGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAG...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTTCACGGAATCGGAAGGACAAACAGTTGAGCCGACGCTCGTATTGCACGCAAGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CSRNRKDKQLSRRSYCTQGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...TTGCGTGCAATACGAGCGTCGGCTCAACTGTTTGTCCTTCCGATTCCGTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATTCACCTGGTTCCTGTaGGGTCTCCTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQFTWFL*GLLHWG
Trigger: CCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTTCACCTGGTTCCTGTaGGGTCTCCTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTFTWFL*GLLHWG
Trigger: CCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAA...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGTTCACCTGGTTCCTGTaGGGTCTCCTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: KPNQQMWINCTLLKARVPFTWFL*GLLHWG
Trigger: CCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAA...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGCTCACTGACAACCCCTaGGCAGGCAAGTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: KPNQQMWINCTLLKARVPLTDNP*AGKSSC
Trigger: GCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAG...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: PRPRPAICSLLENLTVSLLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: SNQPYLERGHSSAYGSERVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTCCCTGTCTGTGGTaGCCTCTGAGCATCGCTGGT +
Preference number: 5 (lower is better)
Translates to: TSKCGSIVHSLRQESRCICPCLW*PLSIAG
Trigger: ACCAGCGATGCTCAGAGGCAACCACAGACAGGGACA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGGCTCTGGTGGCTTCTaGCTGTCCCTCAAGGTTGTC +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTGSGGF*LSLKVV
Trigger: GACAACCTTGAGGGACAGCAAGAAGCCACCAGAGCC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATTCCCAGATGGCTTCTaGGGGAAGAAAGTGCTCACC +
Preference number: 5 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGFPDGF*GKKVLT
Trigger: GGTGAGCACTTTCTTCCCCAAGAAGCCATCTGGGAA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGCTCGTTTCCTCCTaGAGTGGACAAGCTCACATC +
Preference number: 5 (lower is better)
Translates to: RPRPRPAICSLLENLTVSLLVSS*SGQAHI
Trigger: GATGTGAGCTTGTCCACTCAAGGAGGAAACGAGCAG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS TCA 90 bp CAGGAAGTGACTCTATTGCTTCCAATCCTCCCCTGTCCTGAAGCATaGCTGGGCTTTTGGTCTGAGATCTTGAACTTTCCCAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: QEVTLLLPILPCPEA*LGFWSEILNFPRWL
Trigger: AAGCCATCTGGGAAAGTTCAAGATCTCAGACCAAAAGCCCAGTCATGCTTCAGGACAGGGGAGGATTGGAAGCAATAGAGTCACTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 90 bp TGTCCTCTGGGCAAGACAGTTTTCTCTGACAGTCTTGTTCCAGACTaGGCACAGCAAGTCCATGGCCTATTGTTGAGTCTTTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: CPLGKTVFSDSLVPD*AQQVHGLLLSLSHC
Trigger: GCAATGGGAAAGACTCAACAATAGGCCATGGACTTGCTGTGCTCAGTCTGGAACAAGACTGTCAGAGAAAACTGTCTTGCCCAGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp GGGCCTTGGGACCATCAGTTGGTTCCACTGAACTTTCATTTGAAATaGCATGGGAGAAAGTTGGCAGCAACAGCCCTTGTTGGACTGTAT +
Preference number: 5 (lower is better)
Translates to: GPWDHQLVPLNFHLK*HGRKLAATALVGLY
Trigger: ATACAGTCCAACAAGGGCTGTTGCTGCCAACTTTCTCCCATGGCATTTCAAATGAAAGTTCAGTGGAACCAACTGATGGTCCCAAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 90 bp ATCGACGTTCACTTCGGCAGATCCACCTTTACCATCTCGTTCCTCTaGTTTCTGGAAACTTCCAAGAGGACTCTGTGCTTCTGTACCCAA +
Preference number: 5 (lower is better)
Translates to: IDVHFGRSTFTISFL*FLETSKRTLCFCTQ
Trigger: TTGGGTACAGAAGCACAGAGTCCTCTTGGAAGTTTCCAGAAAGCAGAGGAACGAGATGGTAAAGGTGGATCTGCCGAAGTGAACGTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp ACATCACATCTTCAACCATCGTCTTTAGTGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCATCCCCATCCGCTTCCGTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TSHLQPSSLVESSSS*QVYSTHPHPLPWCW
Trigger: CCAGCACCACGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGATGGTTGAAGATGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 90 bp CTTGTCCCTGATCCAGGGATAGCTCTGGAGTTGCTTTTAGAGGGATaGCAGCCTTCGAGAAATTCCAAATTCTTGGCTGAACACGTAGGT +
Preference number: 5 (lower is better)
Translates to: LVPDPGIALELLLEG*QPSRNSKFLAEHVG
Trigger: ACCTACGTGTTCAGCCAAGAATTTGGAATTTCTCGAAGGCTGCCATCCCTCTAAAAGCAACTCCAGAGCTATCCCTGGATCAGGGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TCATTTGAAATGCCATGGGAGAAAGTTGGCAGCAACAGCCCTTGTTaGACTGTATCATTTTGCCCCTGCAAGAAAGGTGCAGGAACCTGC +
Preference number: 5 (lower is better)
Translates to: SFEMPWEKVGSNSPC*TVSFCPCKKGAGTC
Trigger: GCAGGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATACAGTCCAACAAGGGCTGTTGCTGCCAACTTTCTCCCATGGCATTTCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 5 (lower is better)
Translates to: NQQMWINCTLLKARVPMHVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: SIVHSLRQESRCICSRPILLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGATGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGTAGGCTGCTTGCTCTaGCTGGGCCTTGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRVGCLL*LGLAAN
Trigger: GTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTAC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGTGGCTGCAGTGACCTaGGACTCTGAACTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVVAAVT*DSELKK
Trigger: CTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGCCAC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTGCCATGGGAGAAAGTaGGCAGCAACAGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVCHGRK*AATALV
Trigger: AACAAGGGCTGTTGCTGCCAACTTTCTCCCATGGCA...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGCTGGAGACGGTTCTTaGGAGATGGTGGGAGACTGT +
Preference number: 5 (lower is better)
Translates to: NQQMWINCTLLKARVPMHAGDGS*EMVGDC
Trigger: ACAGTCTCCCACCATCTCCAAAGAACCGTCTCCAGC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCCTCAGGTACCAGGATaGAGGAAGGATCTGTACTCT +
Preference number: 5 (lower is better)
Translates to: RPRPRPAICSLLENLTVSPQVPG*RKDLYS
Trigger: AGAGTACAGATCCTTCCTCAATCCTGGTACCTGAGG...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGAGTGTGACTCTGGGATaGGTAGGCACTGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: KPNQQMWINCTLLKARVPSVTLG*VGTGSG
Trigger: TCCAGACCCAGTGCCTACCAATCCCAGAGTCACACT...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCTTCCTCAGCAGCTCTaGCCATTTTGCTGGGATCCA +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVLPQQL*PFCWDP
Trigger: TGGATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCACAGAGGAGACCGCTTaGGAGACTTCTTCACCGTCT +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVTEETA*ETSSPS
Trigger: AGACGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTGT...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCTGCTGGCTATCGGCTaGTCTTCATCGAACACCGCC +
Preference number: 5 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCLLAIG*SSSNTA
Trigger: GGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RPRPRPAICSLLENLTVSGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATTCACCTGGTTCCTGTaGGGTCTCCTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKFTWFL*GLLHWG
Trigger: CCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAA...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAACTCACTGACAACCCCTaGGCAGGCAAGTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKLTDNP*AGKSSC
Trigger: GCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAG...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: RPRPRPAICSLLENLTVSGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...GGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIRWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGTGGCTGCAGTGACCTaGGACTCTGAACTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSVAAVT*DSELKK
Trigger: CTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGCCAC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CAA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCCGTGTGCAGTGGGACTaGAAGCTGAGCTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCRVQWD*KLSLKF
Trigger: AAACTTCAAGCTCAGCTTCAAGTCCCACTGCACACG...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGAAACCTCACCTTTCTaGGTCTCCAGATGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCETSPF*VSRWGL
Trigger: CAAGCCCCATCTGGAGACCAAGAAAGGTGAGGTTTC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGTCCATGGCCTATTGTaGAGTCTTTCCCATTGCGGG +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCVHGLL*SLSHCG
Trigger: CCCGCAATGGGAAAGACTCAACAATAGGCCATGGAC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCCCTTGGGTGATGAACTaGGAGTATTGCATGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QPYLERGHSSAYGSERRRPWVMN*EYCMGC
Trigger: GCAGCCCATGCAATACTCCAAGTTCATCACCCAAGG...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAACGCAGGCTGCCTATTaGCAAAGCATCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQTQAAY*QSIIQL
Trigger: GAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGACAGAGGAGACCGCTTaGGAGACTTCTTCACCGTCT +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTTEETA*ETSSPS
Trigger: AGACGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTGT...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS TCA 90 bp ATCAAGGGCTCACTGATAGGTTCAGGCACATTCAAAACACTTCCATaGGAAGAGCCATTCAGGGCACAGGGGGATCCTGATAGATTAGTT +
Preference number: 5 (lower is better)
Translates to: IKGSLIGSGTFKTLP*EEPFRAQGDPDRLV
Trigger: AACTAATCTATCAGGATCCCCCTGTGCCCTGAATGGCTCTTCTCATGGAAGTGTTTTGAATGTGCCTGAACCTATCAGTGAGCCCTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 5 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGTCTCGGCACCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: NYTRKCKRIARNPGRSRHLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...GTGCCGAGACCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATCAGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: AWLCSSVSCLHGDCFEQSETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...TGATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: PRPRPAICSLLENLTVSLGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...CAGGGAGACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIREYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: LENLTVSLIQELRGQLAMEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACAGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGCAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGACAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIRQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGAACACAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: RSYSSRHMAMVCPSLSRTQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...TGTTCTAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAATGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTGCTGTCCCTCAAGGTaGTCTCCATGTGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: INCTLLKARVPMHMFTSHCCPSR*SPCDLL
Trigger: AAGCAGATCACATGGAGACAACCTTGAGGGACAGCA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTCAGACCTGGGTCACTTaGACAAGCCTTTTGCCCATT +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCQTWVT*TSLLPI
Trigger: AATGGGCAAAAGGCTTGTCAAAGTGACCCAGGTCTG...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTATCTGCAGTTCCTGGTaGCAAGACTGTGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSICSSW*QDCGEG
Trigger: TCCTTCACCACAGTCTTGCAACCAGGAACTGCAGAT...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAATGGATCCTGGGGTACTaGATGAGAACTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEWILGY*MRTLSL
Trigger: GAGGCTGAGAGTTCTCATCAAGTACCCCAGGATCCA...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGGGTTTCTTGGTGGCTaGCTTCTTTTTCAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: INCTLLKARVPMHMFTSHGFLGG*LLFQGR
Trigger: CCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: NQQMWINCTLLKARVPMHGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: LENLTVSLIQELRGQLAMETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SIVHSLRQESRCICSRPIVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...GATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SLVATVVAIWQWFALLFLVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp TCACTCGTAGCTACAGTAGTCGCCATATGGCAATGGTTTGCCCTTCTCTTTCTAGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: SLVATVVAIWQWFALLFLGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...TAGAAAGAGAAGGGCAAACCATTGCCATATGGCGACTACTGTAGCTACGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: NQQMWINCTLLKARVPMHEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATGAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: CTLLKARVPMHMFTSHQMSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...CATCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CCTGGTAGGTCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGAAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: PGRSRHCIRSNQPYLERGSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...TCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGACCTACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACTCTTCCTTCAGCTCTTaGTCTCCTTCAGCACTAGGG +
Preference number: 5 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYSSFSS*SPSALG
Trigger: CCCTAGTGCTGAAGGAGACAAAGAGCTGAAGGAAGA...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATACAAGTCCATGGCCTATaGTTGAGTCTTTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIQVHGL*LSLSHC
Trigger: GCAATGGGAAAGACTCAACAATAGGCCATGGACTTG...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCCCATTTGTAGGTGGTaGGTTCTTGTCACAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVPICRW*VLVTEN
Trigger: ATTCTCTGTGACAAGAACCAACCACCTACAAATGGG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS CCA 90 bp TTGGGACCATCAGTTGGTTCCACTGAACTTTCATTTGAAATGCCATaGGAGAAAGTTGGCAGCAACAGCCCTTGTTGGACTGTATCATTT +
Preference number: 5 (lower is better)
Translates to: LGPSVGSTELSFEMP*EKVGSNSPCWTVSF
Trigger: AAATGATACAGTCCAACAAGGGCTGTTGCTGCCAACTTTCTCCCATGGCATTTCAAATGAAAGTTCAGTGGAACCAACTGATGGTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 90 bp TTTTGTTCTCTGTATTACTGTGTGCCTTTGAAACCTCACCTTTCTTaGTCTCCAGATGGGGCTTGCTGTGAAAGGCTTGAGACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FCSLYYCVPLKPHLS*SPDGACCERLETSL
Trigger: AAGAGAAGTCTCAAGCCTTTCACAGCAAGCCCCATCTGGAGACCAAGAAAGGTGAGGTTTCAAAGGCACACAGTAATACAGAGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS-3UTR CAA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGTGCTGGAAGCACTGTaGGATCCTGTGCCACATGCA +
Preference number: 5 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPVLEAL*DPVPHA
Trigger: TGCATGTGGCACAGGATCCAACAGTGCTTCCAGCAC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTGTGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: PYLERGHSSAYGSERRRCETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...ACAGCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: NQQMWINCTLLKARVPMHETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: KPNQQMWINCTLLKARVPKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: NQQMWINCTLLKARVPMHVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...ATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: INCTLLKARVPMHMFTSHVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAAGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: CSLLENLTVSLIQELRGQVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...TTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp AATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: NCTLLKARVPMHMFTSHQSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...CTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGTGGCTGCAGTGACCTaGGACTCTGAACTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRVAAVT*DSELKK
Trigger: CTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGCCAC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
CDS-3UTR CAA 90 bp TTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAGAAATTCCAAATTCTaGGCTGAACACGTAGGTAGC +
Preference number: 5 (lower is better)
Translates to: LENLTVSLIQELRGQLAMRNSKF*AEHVGS
Trigger: GCTACCTACGTGTTCAGCCAAGAATTTGGAATTTCT...CATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp AAACCAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGGAGGCTACCTTCTGGTaGTTCTTGCGTTTTTCTAAG +
Preference number: 5 (lower is better)
Translates to: KPNQQMWINCTLLKARVPEATFW*FLRFSK
Trigger: CTTAGAAAAACGCAAGAACAACCAGAAGGTAGCCTC...CGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGAGCCACAACTCTATTTaGAGTATTCTTGGGGGCCTT +
Preference number: 5 (lower is better)
Translates to: MWINCTLLKARVPMHMFTSHNSI*SILGGL
Trigger: AAGGCCCCCAAGAATACTCAAAATAGAGTTGTGGCT...CGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGCAGCTCTTGCCATTTaGCTGGGATCCAGGGGAGTA +
Preference number: 5 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPAALAI*LGSRGV
Trigger: TACTCCCCTGGATCCCAGCAAAATGGCAAGAGCTGC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACAGCTGTTGCTTGGCTaGCTGGTCTTCAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKQLLLG*LVFNLA
Trigger: AGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTG...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAATGCAGCTTTTCATCTTaGCTCTCATCAGGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RSNQPYLERGHSSAYGSECSFSS*LSSGSG
Trigger: TCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCA...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCCCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCPSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGG...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR CAA 90 bp CAAAGGCCAAGGCCAAGGCCAGCAATTTGTAGTCTATTAGAGAATCTGACAGTCCCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: QRPRPRPAICSLLENLTVPSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGG...GACTGTCAGATTCTCTAATAGACTACAAATTGCTGGCCTTGGCCTTGGCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR CAA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTCTCCTTAGGGGCATTTaGGCAACTGGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPLLRGI*ATGFLP
Trigger: AGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAG...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: RSNQPYLERGHSSAYGSEKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...TTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: ICSLLENLTVSLIQELRGKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: ICSLLENLTVSLIQELRGVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: ICSLLENLTVSLIQELRGGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CAAACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCTCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: QTSKCGSIVHSLRQESRCSSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...GCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000207282.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATCAGATCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: IVHSLRQESRCICSRPIRSSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...TCTGATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000207282.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATGCTTGGCTTTGCAGCTCTGTGTCTTGTCTCCATGGTGACTGCTTTGAACAATTCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: MLGFAALCLVSMVTALNNSSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...ATTGTTCAAAGCAGTCACCATGGAGACAAGACACAGAGCTGCAAAGCCAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp AACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: NQPYLERGHSSAYGSERRQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...TCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGCAGCTGCTGTACAGTTaGGTGGGAGATGGATTTTTC +
Preference number: 5 (lower is better)
Translates to: SNQPYLERGHSSAYGSERQLLYS*VGDGFF
Trigger: GAAAAATCCATCTCCCACCAAACTGTACAGCAGCTG...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: INCTLLKARVPMHMFTSHSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGGGATAGCTCTGGAGTaGCTTTTAGAGGGATGGCAG +
Preference number: 5 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKGIALE*LLEGWQ
Trigger: CTGCCATCCCTCTAAAAGCAACTCCAGAGCTATCCC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTCCACTGAACTTTCATTaGAAATGCCATGGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSPLNFH*KCHGRK
Trigger: CTTTCTCCCATGGCATTTCAAATGAAAGTTCAGTGG...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATATGTTCACGTCCCATTATTACTGTGTGCCTTaGAAACCTCACCTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: INCTLLKARVPMHMFTSHYYCVP*KPHLSW
Trigger: CCAAGAAAGGTGAGGTTTCAAAGGCACACAGTAATA...ATGGGACGTGAACATATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ACCAGCAAATGTGGATCAATTGTACACTCCTTAAGGCAAGAGTCCCGATGCATAGAGCTGGGAACGATTTaGTTCTCTGTATTACTGTGT +
Preference number: 5 (lower is better)
Translates to: TSKCGSIVHSLRQESRCIELGTI*FSVLLC
Trigger: ACACAGTAATACAGAGAACAAAATCGTTCCCAGCTC...TATGCATCGGGACTCTTGCCTTAAGGAGTGTACAATTGATCCACATTTGCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAGACGCTTTTGGTCTGAGATCTaGAACTTTCCCAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: QPYLERGHSSAYGSERRRFWSEI*NFPRWL
Trigger: AAGCCATCTGGGAAAGTTCAAGATCTCAGACCAAAA...GCGTCTCCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCTTTTCTCTGACAGTCTaGTTCCAGACTGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCFSLTV*FQTEHS
Trigger: GCTGTGCTCAGTCTGGAACAAGACTGTCAGAGAAAA...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp ATTTGTAGTCTATTAGAGAATCTGACAGTCTCCCTGATACAGGAACTCCGAGGTACTTTGACAAGCCTTTaGCCCATTTGTAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ICSLLENLTVSLIQELRGTLTSL*PICRWL
Trigger: CAACCACCTACAAATGGGCAAAAGGCTTGTCAAAGT...ACCTCGGAGTTCCTGTATCAGGGAGACTGTCAGATTCTCTAATAGACTACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGATGAACTTGGAGTATaGCATGGGCTGCCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRDELGV*HGLPLE
Trigger: CTCCAAAGGCAGCCCATGCAATACTCCAAGTTCATC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TCTCGGCACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGACTGCTCAAAGATCTaGGTGATATGCTCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: SRHCIRSNQPYLERGHSSDCSKI*VICSLK
Trigger: TTTTAGGGAGCATATCACCAAGATCTTTGAGCAGTC...ACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTGCCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp TCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACGGAAGTGAAAGGAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: SNQPYLERGHSSAYGSERKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...CCTTTCACTTCCGTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GTCTCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAAGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: VSLIQELRGQLAMNYTRKGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...TTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTTCCCATCTTGGCGATCAGCTCGTCACAAATCTTGGTGAGTTCTTCTATCTCTTCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: FPILAISSSQILVSSSISSSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTTGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGATTGGAGGATGAATTaGGTCCCTCTTCCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRDWRMN*VPLPSA
Trigger: AGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGTAGGGTAGGTGGTTGGTTCTaGTCACAGAGAATAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LAMNYTRKCKRIARNPGRVGGWF*SQRIAE
Trigger: CTCTGCTATTCTCTGTGACAAGAACCAACCACCTAC...CCTACCAGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS-3UTR CAA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGGGTCTTTTTCATCTTaGGCCTCCTTAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNGSFSS*ASLGAF
Trigger: AAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CACTGCATACGGTCAAACCAACCTTATTTAGAAAGAGGACACAGTAGTGCATACTCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: HCIRSNQPYLERGHSSAYSSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGA...GTATGCACTACTGTGTCCTCTTTCTAAATAAGGTTGGTTTGACCGTATGCAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000207282.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAGAGTACAAGGCAGTTTaGGAGATGGAGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKEYKAV*EMETSG
Trigger: ACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTC...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGTGGGCAATCTCTGCATaGGCTCTGTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPWAISA*ALSSFS
Trigger: AGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCA...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp TCCCTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCCCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: SLIQELRGQLAMNYTRKCPSEGE*NLVSFT
Trigger: TGTAAATGAGACCAAATTCAATTCACCCTCAGAGGG...GCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS-3UTR CAA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGAGACTCTTGCATTTTaGAGGTGGAGGAAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNETLAF*RWRKKG
Trigger: ACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATGTCAAAGTTGTACGATaGTTGGGACAGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNVKVVR*LGQFGR
Trigger: TCTCCCAAACTGTCCCAACAATCGTACAACTTTGAC...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp GGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATCCTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: GQLAMNYTRKCKRIARNPGVFFF*AGLFNP
Trigger: TGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCC...AGGATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS-3UTR CAA 90 bp TTAATGGAACATTCCACTTCTATAAAAATATACATAGACCCAACAGCAAACCCGAAAGTTGTACGATTGTaGGGACAGTTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: LMEHSTSIKIYIDPTANPKVVRL*GQFGRL
Trigger: GAGTCTCCCAAACTGTCCCAACAATCGTACAACTTT...CGGGTTTGCTGTTGGGTCTATGTATATTTTTATAGAAGTGGAATGTTCCATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209108.2
CDS-3UTR CAA 90 bp CTGATACAGGAACTCCGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAAAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: LIQELRGQLAMNYTRKCKSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...TTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCGGAGTTCCTGTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS-3UTR CAA 90 bp CGAGGTCAACTTGCTATGAATTATACTAGAAAATGCAAACGGATAGCAAGGAATAGCTCGTCACAAATCTaGGTGAGTTCTTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: RGQLAMNYTRKCKRIARNSSSQI*VSSSIS
Trigger: AGAGATAGAAGAACTCACCAAGATTTGTGACGAGCT...ATTCCTTGCTATCCGTTTGCATTTTCTAGTATAATTCATAGCAAGTTGACCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207376.2
ENSMUST00000207395.2
ENSMUST00000207549.2
CDS GCA 72 bp CCTTCTGGGCCTCTGGCTTCCTGGGGGTGCTCCCCTTaGTCAGCCACCTCTGGAGACACAGTGCACGGGTCC +
Preference number: 6 (lower is better)
Translates to: PSGPLASWGCSP*SATSGDTVHGS
Trigger: GGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GCTGGCAGCAAGGCATCCCCGCAGCTGGGCTCAAGCTaGACAAGTTGGCGTGGCTCACTCAGGGTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: AGSKASPQLGSS*TSWRGSLRVEA
Trigger: CGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCGGGGATGCCTTGCTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CAGTGGAGAACCTTCTGGGCCTCTGGCTTCCTGGGGGTGCTCCCCTaGCTCAGCCACCTCTGGAGACACAGTGCACGGGTCCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: QWRTFWASGFLGVLP*LSHLWRHSARVQAG
Trigger: GCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGTTCTCCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp AGCTGGCAGCAAGGCATCCCCGCAGCTGGGCTCAAGCTGCACAAGTaGGCGTGGCTCACTCAGGGTGGAGGCGAGGCTCTGGTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SWQQGIPAAGLKLHK*AWLTQGGGEALVSL
Trigger: CAGGCTGACCAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCGGGGATGCCTTGCTGCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GGGAAGGACGGAAAGGGCTTCCTTCCACGGACTCGCTaGTGCGAGGGCCATCGGGAACCACAACCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: GKDGKGFLPRTR*CEGHREPQPVA
Trigger: AGCCACCGGTTGTGGTTCCCGATGGCCCTCGCAGCAGCGAGTCCGTGGAAGGAAGCCCTTTCCGTCCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 72 bp AGGACCGGCTGCGGAGGGAGCCGAGGCTGTATGTTCTaGGGCCAAAGGAGCAGGACTTGCACGGGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: RTGCGGSRGCMF*GQRSRTCTGSR
Trigger: TCTGCTGCCCGTGCAAGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCGGCTCCCTCCGCAGCCGGTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
CDS CCA 72 bp AAGGCATCCCCGCAGCTGGGCTCAAGCTGCACAAGTTaGCGTGGCTCACTCAGGGTGGAGGCGAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: KASPQLGSSCTS*RGSLRVEARLW
Trigger: CCAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCGGGGATGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ACCTTCTGGGCCTCTGGCTTCCTGGGGGTGCTCCCCTaGCTCAGCCACCTCTGGAGACACAGTGCACGGGTC +
Preference number: 6 (lower is better)
Translates to: TFWASGFLGVLP*LSHLWRHSARV
Trigger: GACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACCCCCAGGAAGCCAGAGGCCCAGAAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CAAGGCATCCCCGCAGCTGGGCTCAAGCTGCACAAGTaGGCGTGGCTCACTCAGGGTGGAGGCGAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: QGIPAAGLKLHK*AWLTQGGGEAL
Trigger: CAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGCCCAGCTGCGGGGATGCCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp CTGAGGGGCACGGCTGTTCCCAGGGCAGAGATGATCTaGGCAGTGGAGAACCTTCTGGGCCTCTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LRGTAVPRAEMI*AVENLLGLWLP
Trigger: AGGAAGCCAGAGGCCCAGAAGGTTCTCCACTGCCCAGATCATCTCTGCCCTGGGAACAGCCGTGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GCTCAAGCTGCACAAGTTGGCGTGGCTCACTCAGGGTaGAGGCGAGGCTCTGGTCAGCCTGAAGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: AQAAQVGVAHSG*RRGSGQPEGSH
Trigger: GTGGCTTCCTTCAGGCTGACCAGAGCCTCGCCTCCACCCTGAGTGAGCCACGCCAACTTGTGCAGCTTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp AGGCTCTCCAGTCCTCTCTCCTTCAACACTGGCACCTaGCCTGCTCTCCTCCAAGGCTGTCCCCACCAGACC +
Preference number: 6 (lower is better)
Translates to: RLSSPLSFNTGT*PALLQGCPHQT
Trigger: GGTCTGGTGGGGACAGCCTTGGAGGAGAGCAGGCCAGGTGCCAGTGTTGAAGGAGAGAGGACTGGAGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp GAGCTTTCCTGGGCAGCTTGCAGCCTGGACTCCCCATaGCTGCTCATGGCTGCCCACATCCAACGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: ELSWAACSLDSP*LLMAAHIQRAH
Trigger: ATGGGCCCGTTGGATGTGGGCAGCCATGAGCAGCAATGGGGAGTCCAGGCTGCAAGCTGCCCAGGAAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239258.2
CDS CAA 90 bp CGGCTTCCCATGCCCTACAGGAGTAGGGAGCTGAGGGCCCAGCTGTaGCTTGGCTTGCTGGTCTTCAACCTGGCTGTCCCCTTGAAGGGT +
Preference number: 6 (lower is better)
Translates to: RLPMPYRSRELRAQL*LGLLVFNLAVPLKG
Trigger: ACCCTTCAAGGGGACAGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCTGTAGGGCATGGGAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TGTAAGAGCGGTGGCTGCTGCAGGAGGCGGGATCTCTaGGAGCTGACTACTGCTGCCTGTGCCCTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: CKSGGCCRRRDL*ELTTAACALLL
Trigger: GAGCAAGAGGGCACAGGCAGCAGTAGTCAGCTCTCAGAGATCCCGCCTCCTGCAGCAGCCACCGCTCTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GGTGCTCCCCTTGCTCAGCCACCTCTGGAGACACAGTaGACGGGTCCAGGCTGGCAACACTTTCAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: GAPLAQPPLETQ*TGPGWQHFQKQ
Trigger: CTGCTTCTGAAAGTGTTGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTGAGCAAGGGGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TCTGGAGCAGCAGCCACATGCATCTCCCTTGCCATCTaGTCGTCTCTGACCGGGAGAGGCATCCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SGAAATCISLAI*SSLTGRGILSR
Trigger: CCTGGACAGGATGCCTCTCCCGGTCAGAGACGAGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GAGGGCCTGGCATTTGCTTCTGGAGCAGCAGCCACATaGATCTCCCTTGCCATCTGCTCGTCTCTGACCGGG +
Preference number: 6 (lower is better)
Translates to: EGLAFASGAAAT*ISLAICSSLTG
Trigger: CCCGGTCAGAGACGAGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GGCAGGGCATGCTGCGATCTCAGAGGGCCTGGCATTTaGTTCTGGAGCAGCAGCCACATGCATCTCCCTTGC +
Preference number: 6 (lower is better)
Translates to: GRACCDLRGPGI*FWSSSHMHLPC
Trigger: GCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CTCCAGTCCTCTCTCCTTCAACACTGGCACCTGGCCTaGTCTCCTCCAAGGCTGTCCCCACCAGACCCATCA +
Preference number: 6 (lower is better)
Translates to: LQSSLLQHWHLA*SPPRLSPPDPS
Trigger: TGATGGGTCTGGTGGGGACAGCCTTGGAGGAGAGCAGGCCAGGTGCCAGTGTTGAAGGAGAGAGGACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp TGGGGCCAAAGGAGCAGGACTTGCACGGGCAGCAGATaGGGAGGCGCTCTGGACTGTCAGATGTGTAGAGAC +
Preference number: 6 (lower is better)
Translates to: WGQRSRTCTGSR*GGALDCQMCRD
Trigger: GTCTCTACACATCTGACAGTCCAGAGCGCCTCCCCATCTGCTGCCCGTGCAAGTCCTGCTCCTTTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
CDS CCA 72 bp CCTGAACAGGCTCTCCAGTCCTCTCTCCTTCAACACTaGCACCTGGCCTGCTCTCCTCCAAGGCTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: PEQALQSSLLQH*HLACSPPRLSP
Trigger: TGGGGACAGCCTTGGAGGAGAGCAGGCCAGGTGCCAGTGTTGAAGGAGAGAGGACTGGAGAGCCTGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ATGCCCTACAGGAGTAGGGAGCTGAGGGCCCAGCTGTaGCTTGGCTTGCTGGTCTTCAACCTGGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: MPYRSRELRAQL*LGLLVFNLAVP
Trigger: GGGGACAGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCTGTAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TCAAAGTCACTGGCTTGTAGGCTAAGCGAACGGGACAGCGTGGACTaGGAGGGTGGCACGGACTCGGTGGATTTCCTCCGCGTGCTCACC +
Preference number: 6 (lower is better)
Translates to: SKSLACRLSERDSVD*EGGTDSVDFLRVLT
Trigger: GGTGAGCACGCGGAGGAAATCCACCGAGTCCGTGCCACCCTCCAAGTCCACGCTGTCCCGTTCGCTTAGCCTACAAGCCAGTGACTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CAA 90 bp ATGCCCTACAGGAGTAGGGAGCTGAGGGCCCAGCTGTTGCTTGGCTaGCTGGTCTTCAACCTGGCTGTCCCCTTGAAGGGTGGCTGCATC +
Preference number: 6 (lower is better)
Translates to: MPYRSRELRAQLLLG*LVFNLAVPLKGGCI
Trigger: GATGCAGCCACCCTTCAAGGGGACAGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCTGTAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TCGGTGGATTTCCTCCGCGTGCTCACCTTACACTCCTaGCCCTTAGAGTCGGCAGAGCACGGCTCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: SVDFLRVLTLHS*PLESAEHGSKL
Trigger: GAGCTTGGAGCCGTGCTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAGCACGCGGAGGAAATCCACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS TCA 72 bp TGGGGAGGCGCTCTGGACTGTCAGATGTGTAGAGACTaGGCTGACAGCGTCACCATGGTGGGACGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: WGGALDCQMCRD*ADSVTMVGRVS
Trigger: GCTGACTCGTCCCACCATGGTGACGCTGTCAGCTCAGTCTCTACACATCTGACAGTCCAGAGCGCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
CDS TCA 72 bp AAGGAAGCCACTACTCAGAGCAGGTTCTGGTGCCTCTaGAGCCTGCTGCATCCCGGGGTCTCCTTCACTGGC +
Preference number: 6 (lower is better)
Translates to: KEATTQSRFWCL*SLLHPGVSFTG
Trigger: GCCAGTGAAGGAGACCCCGGGATGCAGCAGGCTTCAGAGGCACCAGAACCTGCTCTGAGTAGTGGCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CTGCAGGAGGCGGGATCTCTGAGAGCTGACTACTGCTaGCTGTGCCCTCTTGCTCATTTCCCCCTAGTGCAG +
Preference number: 6 (lower is better)
Translates to: LQEAGSLRADYC*LCPLAHFPLVQ
Trigger: CTGCACTAGGGGGAAATGAGCAAGAGGGCACAGGCAGCAGTAGTCAGCTCTCAGAGATCCCGCCTCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp ATCGGCTTGTCTTCATCGAACACCGCCGAGGAGGAGTaGGAAGGACGGAAAGGGCTTCCTTCCACGGACTCG +
Preference number: 6 (lower is better)
Translates to: IGLSSSNTAEEE*EGRKGLPSTDS
Trigger: CGAGTCCGTGGAAGGAAGCCCTTTCCGTCCTTCCCACTCCTCCTCGGCGGTGTTCGATGAAGACAAGCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 72 bp CAGCCACCTCTGGAGACACAGTGCACGGGTCCAGGCTaGCAACACTTTCAGAAGCAGAGCAGGAGCCTCCTA +
Preference number: 6 (lower is better)
Translates to: QPPLETQCTGPG*QHFQKQSRSLL
Trigger: TAGGAGGCTCCTGCTCTGCTTCTGAAAGTGTTGCCAGCCTGGACCCGTGCACTGTGTCTCCAGAGGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp CCTCACTGGCAGGGCATGCTGCGATCTCAGAGGGCCTaGCATTTGCTTCTGGAGCAGCAGCCACATGCATCT +
Preference number: 6 (lower is better)
Translates to: PHWQGMLRSQRA*HLLLEQQPHAS
Trigger: AGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCCAGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp TCCTCAGAGTCGGAACTCCTCTTTCCGGAGCTTTCCTaGGCAGCTTGCAGCCTGGACTCCCCATTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SSESELLFPELS*AACSLDSPLLL
Trigger: GAGCAGCAATGGGGAGTCCAGGCTGCAAGCTGCCCAGGAAAGCTCCGGAAAGAGGAGTTCCGACTCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239258.2
CDS CAA 72 bp TGGCAGGGCATGCTGCGATCTCAGAGGGCCTGGCATTaGCTTCTGGAGCAGCAGCCACATGCATCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: WQGMLRSQRAWH*LLEQQPHASPL
Trigger: CAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp AGGAGTAGGGAGCTGAGGGCCCAGCTGTTGCTTGGCTaGCTGGTCTTCAACCTGGCTGTCCCCTTGAAGGGT +
Preference number: 6 (lower is better)
Translates to: RSRELRAQLLLG*LVFNLAVPLKG
Trigger: ACCCTTCAAGGGGACAGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CATCCTCACTGGCAGGGCATGCTGCGATCTCAGAGGGCCTGGCATTaGCTTCTGGAGCAGCAGCCACATGCATCTCCCTTGCCATCTGCT +
Preference number: 6 (lower is better)
Translates to: HPHWQGMLRSQRAWH*LLEQQPHASPLPSA
Trigger: AGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGCCCTGCCAGTGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp GCCCAGCTGTTGCTTGGCTTGCTGGTCTTCAACCTGGCTGTCCCCTaGAAGGGTGGCTGCATCCTCCTCCATCACCTGAGCCCTGTTAGA +
Preference number: 6 (lower is better)
Translates to: AQLLLGLLVFNLAVP*KGGCILLHHLSPVR
Trigger: TCTAACAGGGCTCAGGTGATGGAGGAGGATGCAGCCACCCTTCAAGGGGACAGCCAGGTTGAAGACCAGCAAGCCAAGCAACAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TTCCTCAGAGTCGGAACTCCTCTTTCCGGAGCTTTCCTGGGCAGCTaGCAGCCTGGACTCCCCATTGCTGCTCATGGCTGCCCACATCCA +
Preference number: 6 (lower is better)
Translates to: FLRVGTPLSGAFLGS*QPGLPIAAHGCPHP
Trigger: TGGATGTGGGCAGCCATGAGCAGCAATGGGGAGTCCAGGCTGCAAGCTGCCCAGGAAAGCTCCGGAAAGAGGAGTTCCGACTCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239258.2
CDS CAA 90 bp AAGGCCCGAGTCCCCACAACGTGCTTCTTCACGCAGGCTGCCTATTaGCAAAGCATCATCCAGCTCCTGTTGGGACTTGCTCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: KARVPTTCFFTQAAY*QSIIQLLLGLAQPL
Trigger: CAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAGCACGTTGTGGGGACTCGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TACAAGGCAGTTTTGGAGATGGAGACATCTGGTGGGTaGGCAGCTTCCCTCTTGGTGTCCTGGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: YKAVLEMETSGG*AASLLVSWRLR
Trigger: CCGCAGCCGCCAGGACACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS TCA 72 bp GGAGACTCAAGGTCAGCTGAGTTTTGCATCCCTGGCTaGGTGGCAGCAGGGGCTTTGGTTGCTGACTCTGGG +
Preference number: 6 (lower is better)
Translates to: GDSRSAEFCIPG*VAAGALVADSG
Trigger: CCCAGAGTCAGCAACCAAAGCCCCTGCTGCCACTCAGCCAGGGATGCAAAACTCAGCTGACCTTGAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp CAGACGCACATGCCCACGTCTCAGCCCTGCTTGGTGTaGCATCACCTTCTGCTTCCTCAGCAGCTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: QTHMPTSQPCLV*HHLLLPQQLLP
Trigger: TGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp ATACTCGGCTTCCCATGCCCTACAGGAGTAGGGAGCTaGGGGCCCAGCTGTTGCTTGGCTTGCTGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: ILGFPCPTGVGS*GPSCCLACWSS
Trigger: TGAAGACCAGCAAGCCAAGCAACAGCTGGGCCCTCAGCTCCCTACTCCTGTAGGGCATGGGAAGCCGAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp AAGGGTGCTGGAAGCACTGTTGGATCCTGTGCCACATaGATCTGTGGTAAGGGTCCCAGCTTCAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: KGAGSTVGSCAT*ICGKGPSFRAA
Trigger: GGCAGCCCTGAAGCTGGGACCCTTACCACAGATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207395.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS GCA 72 bp AAAGGCACCCTCGGGAGCTGTGATTTCAATTGCTTCTaGTGGGGTGCCCAAGGCCATGGCCTCCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: KGTLGSCDFNCF*WGAQGHGLQLL
Trigger: AAGGAGCTGGAGGCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS GCA 72 bp GGCCCGAGTCCCCACAACGTGCTTCTTCACGCAGGCTaGCTATTTGCAAAGCATCATCCAGCTCCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: GPSPHNVLLHAG*LFAKHHPAPVG
Trigger: CCCAACAGGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAGCACGTTGTGGGGACTCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp AGGTGGACAGGGCAGGGCCTCCACTCTGTTTCTACTTaGTGTCTCTGTCTTATCCAAGCCCAGAGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RWTGQGLHSVST*CLCLIQAQRRR
Trigger: CCTCCGCCTCTGGGCTTGGATAAGACAGAGACAGCAAGTAGAAACAGAGTGGAGGCCCTGCCCTGTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GTGCTCCGGGGTCCTCAGAGGAAACGGCTCCTCTCGTaGTTCCATCTTCTGCATCCTTCCTGGCAGCACTAT +
Preference number: 6 (lower is better)
Translates to: VLRGPQRKRLLS*FHLLHPSWQHY
Trigger: ATAGTGCTGCCAGGAAGGATGCAGAAGATGGAAGCACGAGAGGAGCCGTTTCCTCTGAGGACCCCGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp CGGTGGCTCAGAAATGCATCCTGGTTCTTCTGGGGCTaGTGGATCGATGACCTCAGGCTCTGGGGTGACTTC +
Preference number: 6 (lower is better)
Translates to: RWLRNASWFFWG*WIDDLRLWGDF
Trigger: GAAGTCACCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAGCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 72 bp CACAACCGGTGGCTCAGAAATGCATCCTGGTTCTTCTaGGGCTGGTGGATCGATGACCTCAGGCTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: HNRWLRNASWFF*GWWIDDLRLWG
Trigger: ACCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 72 bp GCGGGAGTACAAGGCAGTTTTGGAGATGGAGACATCTaGTGGGTGAGCAGCTTCCCTCTTGGTGTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: AGVQGSFGDGDI*WVSSFPLGVLA
Trigger: CGCCAGGACACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 72 bp GCATGCTGCGATCTCAGAGGGCCTGGCATTTGCTTCTaGAGCAGCAGCCACATGCATCTCCCTTGCCATCTG +
Preference number: 6 (lower is better)
Translates to: ACCDLRGPGICF*SSSHMHLPCHL
Trigger: CAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAATGCCAGGCCCTCTGAGATCGCAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GTCACCAGACGCACATGCCCACGTCTCAGCCCTGCTTaGTGTGACATCACCTTCTGCTTCCTCAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: VTRRTCPRLSPA*CDITFCFLSSS
Trigger: AGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCGTCTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CAGGTGGACAGGGCAGGGCCTCCACTCTGTTTCTACTaGCTGTCTCTGTCTTATCCAAGCCCAGAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: QVDRAGPPLCFY*LSLSYPSPEAE
Trigger: CTCCGCCTCTGGGCTTGGATAAGACAGAGACAGCAAGTAGAAACAGAGTGGAGGCCCTGCCCTGTCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTGCTTGGCTTGCTGGTCTTCAACCTGGCTGTCCCCTaGAAGGGTGGCTGCATCCTCCTCCATCACCTGAGC +
Preference number: 6 (lower is better)
Translates to: LLGLLVFNLAVP*KGGCILLHHLS
Trigger: GCTCAGGTGATGGAGGAGGATGCAGCCACCCTTCAAGGGGACAGCCAGGTTGAAGACCAGCAAGCCAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp ACAGACAACTTGCTGGAGCTCAGTTCCCGATGTCCCTGTCTGTGGTaGCCTCTGAGCATCGCTGGTGTCCAGAGTCTCTTTCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: TDNLLELSSRCPCLW*PLSIAGVQSLFPGA
Trigger: GGCTCCTGGAAAGAGACTCTGGACACCAGCGATGCTCAGAGGCAACCACAGACAGGGACATCGGGAACTGAGCTCCAGCAAGTTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CGCAGGCTGCCTATTTGCAAAGCATCATCCAGCTCCTGTTGGGACTaGCTCAGCCCCTGCCCAGTAGAGAGACTATCCTTCCCACCCAAG +
Preference number: 6 (lower is better)
Translates to: RRLPICKASSSSCWD*LSPCPVERLSFPPK
Trigger: CTTGGGTGGGAAGGATAGTCTCTCTACTGGGCAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CTACTGAGTCAGGTGGACAGGGCAGGGCCTCCACTCTGTTTCTACTaGCTGTCTCTGTCTTATCCAAGCCCAGAGGCGGAGGCAGTACGT +
Preference number: 6 (lower is better)
Translates to: LLSQVDRAGPPLCFY*LSLSYPSPEAEAVR
Trigger: ACGTACTGCCTCCGCCTCTGGGCTTGGATAAGACAGAGACAGCAAGTAGAAACAGAGTGGAGGCCCTGCCCTGTCCACCTGACTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CAGCTGCAGAAGAGGGAAGGCCCACTGTTAATTCCTGCCTGCTTCTaGCCTGCTGTGAGTGAGCCTGAGTTCCCTGAACAGGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: QLQKREGPLLIPACF*PAVSEPEFPEQALQ
Trigger: CTGGAGAGCCTGTTCAGGGAACTCAGGCTCACTCACAGCAGGCAAGAAGCAGGCAGGAATTAACAGTGGGCCTTCCCTCTTCTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp CTGCTGGCAGCTTTCCTGGGAGGCAGTGCTTGTCCCTaGTCCAGGGATAGCTCTGGAGTTGCTTTTAGAGGG +
Preference number: 6 (lower is better)
Translates to: LLAAFLGGSACP*SRDSSGVAFRG
Trigger: CCCTCTAAAAGCAACTCCAGAGCTATCCCTGGATCAGGGACAAGCACTGCCTCCCAGGAAAGCTGCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TCCAAAGCAGGTGGAGGCTCCTTTACAGGACTTTCATaGGGTGCTCCGGGGTCCTCAGAGGAAACGGCTCCT +
Preference number: 6 (lower is better)
Translates to: SKAGGGSFTGLS*GAPGSSEETAP
Trigger: AGGAGCCGTTTCCTCTGAGGACCCCGGAGCACCTCATGAAAGTCCTGTAAAGGAGCCTCCACCTGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CCTCTTTCCTTTGGAACTCAAAGTCACGAGGCCCAGTaGCCTCTCCAGACAGCAGCTCTGTCCTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PLSFGTQSHEAQ*PLQTAALSLAP
Trigger: AGGAGCCAAGGACAGAGCTGCTGTCTGGAGAGGGCACTGGGCCTCGTGACTTTGAGTTCCAAAGGAAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GGCTTGAGACTTCTCTTCATCATGGTTCCCAGGCTCTaGACCAGCAAGGGCTCTGGTGGCTTCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: GLRLLFIMVPRL*TSKGSGGFLLS
Trigger: GGACAGCAAGAAGCCACCAGAGCCCTTGCTGGTGCAGAGCCTGGGAACCATGATGAAGAGAAGTCTCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GTCACCGGCTTCAGAAAGGCCCGAGTCCCCACAACGTaGTTCTTCACGCAGGCTGCCTATTTGCAAAGCATC +
Preference number: 6 (lower is better)
Translates to: VTGFRKARVPTT*FFTQAAYLQSI
Trigger: GATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAGCACGTTGTGGGGACTCGGGCCTTTCTGAAGCCGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TCAGCCGGCAGAAGGCTCTGTGGGCCTGAAACAGTGTaGTGTGTCAGAACGTCCACAGAACTTCTGGGCATC +
Preference number: 6 (lower is better)
Translates to: SAGRRLCGPETV*CVRTSTELLGI
Trigger: GATGCCCAGAAGTTCTGTGGACGTTCTGACACAGCACACTGTTTCAGGCCCACAGAGCCTTCTGCCGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp ATTTGCTTCTGGAGCAGCAGCCACATGCATCTCCCTTaGCATCTGCTCGTCTCTGACCGGGAGAGGCATCCT +
Preference number: 6 (lower is better)
Translates to: ICFWSSSHMHLP*HLLVSDRERHP
Trigger: AGGATGCCTCTCCCGGTCAGAGACGAGCAGATGGCAAGGGAGATGCATGTGGCTGCTGCTCCAGAAGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp TGGCTCAGAAATGCATCCTGGTTCTTCTGGGGCTGGTaGATCGATGACCTCAGGCTCTGGGGTGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: WLRNASWFFWGW*IDDLRLWGDFR
Trigger: CCTGAAGTCACCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 72 bp TGGACCCGATGCGGGAGTACAAGGCAGTTTTGGAGATaGAGACATCTGGTGGGTGAGCAGCTTCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: WTRCGSTRQFWR*RHLVGEQLPSW
Trigger: CCAAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 72 bp AAGGGTGGGTGTCCCGGGTCAACAGGAGCAGCTGGCTaGATGACATCATCAGTTCCAGGGATACTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: KGGCPGSTGAAG*MTSSVPGILPA
Trigger: TGCTGGAAGTATCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGACCCGGGACACCCACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059145.14
ENSMUST00000207789.2
ENSMUST00000208722.2
CDS CCA 72 bp AACTTGCTGGAGCTCAGTTCCCGATGTCCCTGTCTGTaGTTGCCTCTGAGCATCGCTGGTGTCCAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: NLLELSSRCPCL*LPLSIAGVQSL
Trigger: GAGACTCTGGACACCAGCGATGCTCAGAGGCAACCACAGACAGGGACATCGGGAACTGAGCTCCAGCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp TCCAGGTTCAACCTTCTCCACCCCACAAGGTTGGCCTaGGGACATCAGCAAGCCTTCCCCATCACAGCTGAA +
Preference number: 6 (lower is better)
Translates to: SRFNLLHPTRLA*GHQQAFPITAE
Trigger: TTCAGCTGTGATGGGGAAGGCTTGCTGATGTCCCCAGGCCAACCTTGTGGGGTGGAGAAGGTTGAACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp ATCCCCCGCTGCAGAGATGTCCCCATCTGCAGTTCCTaGTTGCAAGACTGTGGTGAAGGAGACAGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: IPRCRDVPICSS*LQDCGEGDSRC
Trigger: ACACCTGCTGTCTCCTTCACCACAGTCTTGCAACCAGGAACTGCAGATGGGGACATCTCTGCAGCGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp AAGGGTGGGTGTCCCGGGTCAACAGGAGCAGCTGGCTaGATGACATCATCAGTTCCAGGGATACTGTCACTG +
Preference number: 6 (lower is better)
Translates to: KGGCPGSTGAAG*MTSSVPGILSL
Trigger: CAGTGACAGTATCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGACCCGGGACACCCACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS CCA 72 bp GGGACAGTATTCTCCAAGGCAAGGTGTGGGTCTGGCTaGCCACCGAGTTGCTTACCCTCTGAGGGTGAATTG +
Preference number: 6 (lower is better)
Translates to: GTVFSKARCGSG*PPSCLPSEGEL
Trigger: CAATTCACCCTCAGAGGGTAAGCAACTCGGTGGCCAGCCAGACCCACACCTTGCCTTGGAGAATACTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS CAA 72 bp TTTGCATCCCTGGCTGAGTGGCAGCAGGGGCTTTGGTaGCTGACTCTGGGGAGGGACAGTCATCCATATCCT +
Preference number: 6 (lower is better)
Translates to: FASLAEWQQGLW*LTLGRDSHPYP
Trigger: AGGATATGGATGACTGTCCCTCCCCAGAGTCAGCAACCAAAGCCCCTGCTGCCACTCAGCCAGGGATGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTCCCCCTAGTGCAGGCGACTCTTGTCCCAGTGGGGTaGACAGTTCTGACATCTCTGACGGTGGTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: FPLVQATLVPVG*TVLTSLTVVLL
Trigger: AAGGAGCACCACCGTCAGAGATGTCAGAACTGTCAACCCCACTGGGACAAGAGTCGCCTGCACTAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CCCCGCTGCAGAGATGTCCCCATCTGCAGTTCCTGGTaGCAAGACTGTGGTGAAGGAGACAGCAGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: PRCRDVPICSSW*QDCGEGDSRCL
Trigger: AAGACACCTGCTGTCTCCTTCACCACAGTCTTGCAACCAGGAACTGCAGATGGGGACATCTCTGCAGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TTGGAGGGAAGCTCTGACCCCTGCTCGTTTCCTCCTTaGGTGGACAAGCTCACATCTGCCCAAGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LEGSSDPCSFPP*VDKLTSAQGFL
Trigger: AAGGAAGCCTTGGGCAGATGTGAGCTTGTCCACTCAAGGAGGAAACGAGCAGGGGTCAGAGCTTCCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TGGAGTATTGCATGGGCTGCCTTTGGAGGGAAGCTCTaGCCCCTGCTCGTTTCCTCCTTGAGTGGACAAGCT +
Preference number: 6 (lower is better)
Translates to: WSIAWAAFGGKL*PLLVSSLSGQA
Trigger: AGCTTGTCCACTCAAGGAGGAAACGAGCAGGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCAATACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp ACAGGGAAGTCAGGGGCTCTTTCTGCTGGTAGCCCCTaGACAGCTGCAGAAGAGGGAAGGCCCACTGTTAAT +
Preference number: 6 (lower is better)
Translates to: TGKSGALSAGSP*TAAEEGRPTVN
Trigger: ATTAACAGTGGGCCTTCCCTCTTCTGCAGCTGTTCAGGGGCTACCAGCAGAAAGAGCCCCTGACTTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GCATCATCCAGCTCCTGTTGGGACTTGCTCAGCCCCTaGCCAGTAGAGAGACTATCCTTCCCACCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: ASSSSCWDLLSP*PVERLSFPPKF
Trigger: AAACTTGGGTGGGAAGGATAGTCTCTCTACTGGGCAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CCCGCTGCAGAGATGTCCCCATCTGCAGTTCCTGGTTaGAAGACTGTGGTGAAGGAGACAGCAGGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: PAAEMSPSAVPG*KTVVKETAGVF
Trigger: AAAGACACCTGCTGTCTCCTTCACCACAGTCTTGCAACCAGGAACTGCAGATGGGGACATCTCTGCAGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CCACGTCTCAGCCCTGCTTGGTGTGACATCACCTTCTaGTTCCTCAGCAGCTCTTGCCATTTTGCTGGGATC +
Preference number: 6 (lower is better)
Translates to: PRLSPAWCDITF*FLSSSCHFAGI
Trigger: GATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAGCAGGGCTGAGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TGTAGTACCTGTTTCAAGGAGGTCACCAGACGCACATaGCCACGTCTCAGCCCTGCTTGGTGTGACATCACC +
Preference number: 6 (lower is better)
Translates to: CSTCFKEVTRRT*PRLSPAWCDIT
Trigger: GGTGATGTCACACCAAGCAGGGCTGAGACGTGGGCATGTGCGTCTGGTGACCTCCTTGAAACAGGTACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp CGATGCTGTCGAAGTCTAAGTTGTAAGTCCCGCTGCTaGCTATCGGCTTGTCTTCATCGAACACCGCCGAGG +
Preference number: 6 (lower is better)
Translates to: RCCRSLSCKSRC*LSACLHRTPPR
Trigger: CCTCGGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACAACTTAGACTTCGACAGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS CCA 72 bp GGCAGATGCATTTCCACTTTCTGCTGGCAGCTTTCCTaGGAGGCAGTGCTTGTCCCTGATCCAGGGATAGCT +
Preference number: 6 (lower is better)
Translates to: GRCISTFCWQLS*EAVLVPDPGIA
Trigger: AGCTATCCCTGGATCAGGGACAAGCACTGCCTCCCAGGAAAGCTGCCAGCAGAAAGTGGAAATGCATCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp ATCCTGGGTGAGTGTGACTCTGGGATTGGTAGGCACTaGGTCTGGAGAGTAGTGTGCTGTATCCAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: ILGECDSGIGRH*VWRVVCCIQES
Trigger: GCTCTCCTGGATACAGCACACTACTCTCCAGACCCAGTGCCTACCAATCCCAGAGTCACACTCACCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CTCTGGGGAGGGACAGTCATCCATATCCTCTTTCCTTaGGAACTCAAAGTCACGAGGCCCAGTGCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LWGGTVIHILFP*ELKVTRPSALS
Trigger: GGAGAGGGCACTGGGCCTCGTGACTTTGAGTTCCAAAGGAAAGAGGATATGGATGACTGTCCCTCCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTGCTGGAGCTCAGTTCCCGATGTCCCTGTCTGTGGTaGCCTCTGAGCATCGCTGGTGTCCAGAGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: LLELSSRCPCLW*PLSIAGVQSLF
Trigger: AAAGAGACTCTGGACACCAGCGATGCTCAGAGGCAACCACAGACAGGGACATCGGGAACTGAGCTCCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CTTGCTCATTTCCCCCTAGTGCAGGCGACTCTTGTCCCAGTGGGGTaGACAGTTCTGACATCTCTGACGGTGGTGCTCCTTCCAGAACTT +
Preference number: 6 (lower is better)
Translates to: LAHFPLVQATLVPVG*TVLTSLTVVLLPEL
Trigger: AAGTTCTGGAAGGAGCACCACCGTCAGAGATGTCAGAACTGTCAACCCCACTGGGACAAGAGTCGCCTGCACTAGGGGGAAATGAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp CGATCTGCCTGGCCAGCTTCAGGGCTTCTATCCGCATaGCAGCAAACTCTAACTCCTCCTGAAGTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: RSAWPASGLLSA*QQTLTPPEVSG
Trigger: CCCAGAAACTTCAGGAGGAGTTAGAGTTTGCTGTCATGCGGATAGAAGCCCTGAAGCTGGCCAGGCAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS TCA 72 bp TTCCCTGGGATGTTGGGGGAGGGTTCCATCCTAAGGTaGTTTGTCAGGGTGCTGTCTTCAGGAGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: FPGMLGEGSILR*FVRVLSSGASA
Trigger: AGCAGAAGCTCCTGAAGACAGCACCCTGACAAATCACCTTAGGATGGAACCCTCCCCCAACATCCCAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TTTGTCTCCTTCAGCACTAGGGGTTCTGGCAGCCATTaGGTGCTGTGTGGGGCCATCTACTTCAGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: FVSFSTRGSGSH*VLCGAIYFRSG
Trigger: TCCACTCCTGAAGTAGATGGCCCCACACAGCACTCAATGGCTGCCAGAACCCCTAGTGCTGAAGGAGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp GGACAGGATGGGGTCCTCCTCATGGAGTTTGTGCAGTaGGGTAGCTGTGTCAGTCACATGGGATTCAGCAAC +
Preference number: 6 (lower is better)
Translates to: GQDGVLLMEFVQ*GSCVSHMGFSN
Trigger: GTTGCTGAATCCCATGTGACTGACACAGCTACCTCACTGCACAAACTCCATGAGGAGGACCCCATCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp ATCAGGACCCTCAAACAGCACATTCCTTGGAACTCCTaGCTTTTTACTATGGGGCCGGTCAGCAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: IRTLKQHIPWNS*LFTMGPVSSQG
Trigger: GCCCTGGCTGCTGACCGGCCCCATAGTAAAAAGTCAGGAGTTCCAAGGAATGTGCTGTTTGAGGGTCCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp ACGGCTCCAAGCTCTGGAAGTTATCCACCAGCTCGATaGTGTCGAAGTCTAAGTTGTAAGTCCCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: TAPSSGSYPPAR*CRSLSCKSRCW
Trigger: CCAGCAGCGGGACTTACAACTTAGACTTCGACAGCATCGAGCTGGTGGATAACTTCCAGAGCTTGGAGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207282.2
ENSMUST00000207789.2
ENSMUST00000208722.2
ENSMUST00000208743.2
ENSMUST00000239258.2
CDS GCA 72 bp GGCAGTTCTGCATATGGCAGATGCATTTCCACTTTCTaGTGGCAGCTTTCCTGGGAGGCAGTGCTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: GSSAYGRCISTF*WQLSWEAVLVP
Trigger: AGGGACAAGCACTGCCTCCCAGGAAAGCTGCCAGCAGAAAGTGGAAATGCATCTGCCATATGCAGAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GTTGGCAGCAACAGCCCTTGTTGGACTGTATCATTTTaGCCCTGCAAGAAAGGTGCAGGAACCTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: VGSNSPCWTVSF*PCKKGAGTCWR
Trigger: CCTCCAGCAGGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATACAGTCCAACAAGGGCTGTTGCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp ACTATTACCATCCCCCGCTGCAGAGATGTCCCCATCTaGAGTTCCTGGTTGCAAGACTGTGGTGAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: TITIPRCRDVPI*SSWLQDCGEGD
Trigger: GTCTCCTTCACCACAGTCTTGCAACCAGGAACTGCAGATGGGGACATCTCTGCAGCGGGGGATGGTAATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TGGGGCCGGTCAGCAGCCAGGGCTCCAAGCACAGACTaGTCAAAGATCTTGGTGATATGCTCCCTAAAATCA +
Preference number: 6 (lower is better)
Translates to: WGRSAARAPSTD*SKILVICSLKS
Trigger: TGATTTTAGGGAGCATATCACCAAGATCTTTGAGCAGTCTGTGCTTGGAGCCCTGGCTGCTGACCGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TCCAAGGCAAGGTGTGGGTCTGGCTGGCCACCGAGTTaGTTACCCTCTGAGGGTGAATTGAATTTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: SKARCGSGWPPS*LPSEGELNLVS
Trigger: TGAGACCAAATTCAATTCACCCTCAGAGGGTAAGCAACTCGGTGGCCAGCCAGACCCACACCTTGCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS CCA 72 bp TGGAGTTTGTGCAGTGAGGTAGCTGTGTCAGTCACATaGGATTCAGCAACCACCTGCCCCACTACCTCTGCT +
Preference number: 6 (lower is better)
Translates to: WSLCSEVAVSVT*DSATTCPTTSA
Trigger: AGCAGAGGTAGTGGGGCAGGTGGTTGCTGAATCCCATGTGACTGACACAGCTACCTCACTGCACAAACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp CCATCTGATGCTGAGGACAGGATGGGGTCCTCCTCATaGAGTTTGTGCAGTGAGGTAGCTGTGTCAGTCACA +
Preference number: 6 (lower is better)
Translates to: PSDAEDRMGSSS*SLCSEVAVSVT
Trigger: TGTGACTGACACAGCTACCTCACTGCACAAACTCCATGAGGAGGACCCCATCCTGTCCTCAGCATCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp AAACAGTGTGCTGTGTCAGAACGTCCACAGAACTTCTaGGCATCCCGTCTGTTTCTCCAGCTGGCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: KQCAVSERPQNF*ASRLFLQLAAR
Trigger: CCTTGCTGCCAGCTGGAGAAACAGACGGGATGCCCAGAAGTTCTGTGGACGTTCTGACACAGCACACTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp AACAGCACATTCCTTGGAACTCCTGACTTTTTACTATaGGGCCGGTCAGCAGCCAGGGCTCCAAGCACAGAC +
Preference number: 6 (lower is better)
Translates to: NSTFLGTPDFLL*GRSAARAPSTD
Trigger: GTCTGTGCTTGGAGCCCTGGCTGCTGACCGGCCCCATAGTAAAAAGTCAGGAGTTCCAAGGAATGTGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp AGGCCCTGGGCTCTTTCTGTCACTGAGGAGTTCTTCTaGAGCCACCAGGTGCAGCTTTTCATCTTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: RPWALSVTEEFF*SHQVQLFIFAL
Trigger: GAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGAAAGAGCCCAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207918.2
CDS CCA 72 bp AAGGGTGGGTGTCCCGGGTCAACAGGAGCAGCTGGCTaGATGACATCATCAGTTCCAGGGATACTTTCTACT +
Preference number: 6 (lower is better)
Translates to: KGGCPGSTGAAG*MTSSVPGILST
Trigger: AGTAGAAAGTATCCCTGGAACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGACCCGGGACACCCACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207918.2
CDS CAA 72 bp GTAGAGATTGACTCTTCCCAGGTGGCTGCAGTGACCTaGGACTCTGAACTGAAGAAGTCCTCTGGTGGTCCG +
Preference number: 6 (lower is better)
Translates to: VEIDSSQVAAVT*DSELKKSSGGP
Trigger: CGGACCACCAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGCCACCTGGGAAGAGTCAATCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
CDS CAA 72 bp GCAAGGGCTCTGGTGGCTTCTTGCTGTCCCTCAAGGTaGTCTCCATGTGATCTGCTTTCCTCTCTAGCCACA +
Preference number: 6 (lower is better)
Translates to: ARALVASCCPSR*SPCDLLSSLAT
Trigger: TGTGGCTAGAGAGGAAAGCAGATCACATGGAGACAACCTTGAGGGACAGCAAGAAGCCACCAGAGCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTGGGTGATGAACTTGGAGTATTGCATGGGCTGCCTTaGGAGGGAAGCTCTGACCCCTGCTCGTTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LGDELGVLHGLP*EGSSDPCSFPP
Trigger: AGGAGGAAACGAGCAGGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCAATACTCCAAGTTCATCACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp GTCCCCACAACGTGCTTCTTCACGCAGGCTGCCTATTaGCAAAGCATCATCCAGCTCCTGTTGGGACTTGCT +
Preference number: 6 (lower is better)
Translates to: VPTTCFFTQAAY*QSIIQLLLGLA
Trigger: AGCAAGTCCCAACAGGAGCTGGATGATGCTTTGCAAATAGGCAGCCTGCGTGAAGAAGCACGTTGTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp AAGAGGGAAGGCCCACTGTTAATTCCTGCCTGCTTCTaGCCTGCTGTGAGTGAGCCTGAGTTCCCTGAACAG +
Preference number: 6 (lower is better)
Translates to: KREGPLLIPACF*PAVSEPEFPEQ
Trigger: CTGTTCAGGGAACTCAGGCTCACTCACAGCAGGCAAGAAGCAGGCAGGAATTAACAGTGGGCCTTCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp GGTCCTGAGAAGGCGGGTCAGACAGAGGAGACCGCTTaGGAGACTTCTTCACCGTCTTTAGTGGAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: GPEKAGQTEETA*ETSSPSLVESS
Trigger: AGAAGACTCCACTAAAGACGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTGTCTGACCCGCCTTCTCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS CAA 90 bp CTTGGTGTGACATCACCTTCTGCTTCCTCAGCAGCTCTTGCCATTTaGCTGGGATCCAGGGGAGTAGTCAACACTCCTCCAGCCAGCATT +
Preference number: 6 (lower is better)
Translates to: LGVTSPSASSAALAI*LGSRGVVNTPPASI
Trigger: AATGCTGGCTGGAGGAGTGTTGACTACTCCCCTGGATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp GTTGCTTCTGTAGAGATTGACTCTTCCCAGGTGGCTGCAGTGACCTaGGACTCTGAACTGAAGAAGTCCTCTGTGGAGGGTCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: VASVEIDSSQVAAVT*DSELKKSSVEGQGL
Trigger: CAAGCCCTGACCCTCCACAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGCCACCTGGGAAGAGTCAATCTCTACAGAAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215492.2
CDS TCA 72 bp GATCCAGGCAAGTCTCCTTGTTGCTTCTGTAGAGATTaGCTCTTCCCAGGTGGCTGCAGTGACCTTGGACTC +
Preference number: 6 (lower is better)
Translates to: DPGKSPCCFCRD*LFPGGCSDLGL
Trigger: GAGTCCAAGGTCACTGCAGCCACCTGGGAAGAGTCAATCTCTACAGAAGCAACAAGGAGACTTGCCTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000207789.2
ENSMUST00000207918.2
ENSMUST00000208722.2
ENSMUST00000215492.2
CDS TCA 72 bp GGTGGGAGACTGTCCTCTGGGCAAGACAGTTTTCTCTaGCAGTCTTGTTCCAGACTGAGCACAGCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: GGRLSSGQDSFL*QSCSRLSTASP
Trigger: TGGACTTGCTGTGCTCAGTCTGGAACAAGACTGTCAGAGAAAACTGTCTTGCCCAGAGGACAGTCTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp CAGAGAATAGCAGAGATGGACGCTTCTGGGTCTAGTTaGGATGGCTGGAGACGGTTCTTTGGAGATGGTGGG +
Preference number: 6 (lower is better)
Translates to: QRIAEMDASGSS*DGWRRFFGDGG
Trigger: CCCACCATCTCCAAAGAACCGTCTCCAGCCATCTCAACTAGACCCAGAAGCGTCCATCTCTGCTATTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TATCCTTGGGTGATGAACTTGGAGTATTGCATGGGCTaGCTTTGGAGGGAAGCTCTGACCCCTGCTCGTTTC +
Preference number: 6 (lower is better)
Translates to: YPWVMNLEYCMG*LWREALTPARF
Trigger: GAAACGAGCAGGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCAATACTCCAAGTTCATCACCCAAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TGGTGTGACATCACCTTCTGCTTCCTCAGCAGCTCTTaGCATTTTGCTGGGATCCAGGGGAGTAGTCAACAC +
Preference number: 6 (lower is better)
Translates to: WCDITFCFLSSS*HFAGIQGSSQH
Trigger: GTGTTGACTACTCCCCTGGATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGTCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GTCCTGAGAAGGCGGGTCAGACAGAGGAGACCGCTTTaGAGACTTCTTCACCCTAAACGTGTCAAACAGAGA +
Preference number: 6 (lower is better)
Translates to: VLRRRVRQRRPL*RLLHPKRVKQR
Trigger: TCTCTGTTTGACACGTTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTGTCTGACCCGCCTTCTCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 72 bp CAGGTGCAGCTTTTCATCTTTGCTCTCATCAGGCTCTaGAGGAGAAGAGATACTCGGCTTCCCATGCCCTAC +
Preference number: 6 (lower is better)
Translates to: QVQLFIFALIRL*RRRDTRLPMPY
Trigger: GTAGGGCATGGGAAGCCGAGTATCTCTTCTCCTCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp GCAGTGCTTGTCCCTGATCCAGGGATAGCTCTGGAGTaGCTTTTAGAGGGATGGCAGCCTTCGAGAAATTCC +
Preference number: 6 (lower is better)
Translates to: AVLVPDPGIALE*LLEGWQPSRNS
Trigger: GGAATTTCTCGAAGGCTGCCATCCCTCTAAAAGCAACTCCAGAGCTATCCCTGGATCAGGGACAAGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp AGTTGGCAGCAACAGCCCTTGTTGGACTGTATCATTTaGCCCCTGCAAGAAAGGTGCAGGAACCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SWQQQPLLDCII*PLQERCRNLLE
Trigger: CTCCAGCAGGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATACAGTCCAACAAGGGCTGTTGCTGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CCTATTTGCAAAGCATCATCCAGCTCCTGTTGGGACTaGCTCAGCCCCTGCCCAGTAGAGAGACTATCCTTC +
Preference number: 6 (lower is better)
Translates to: PICKASSSSCWD*LSPCPVERLSF
Trigger: GAAGGATAGTCTCTCTACTGGGCAGGGGCTGAGCAAGTCCCAACAGGAGCTGGATGATGCTTTGCAAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CTTGGTGTGAGTAGGGTCCCAGGTACCATCTTCTCTTaGTTGACCGTTGCTGGGCAATGTTTCCAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LGVSRVPGTIFS*LTVAGQCFQVL
Trigger: GAGCACCTGGAAACATTGCCCAGCAACGGTCAACAAAGAGAAGATGGTACCTGGGACCCTACTCACACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ACATCACCTTCTGCTTCCTCAGCAGCTCTTGCCATTTaGCTGGGATCCAGGGGAGTAGTCAACACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: TSPSASSAALAI*LGSRGVVNTPP
Trigger: TGGAGGAGTGTTGACTACTCCCCTGGATCCCAGCAAAATGGCAAGAGCTGCTGAGGAAGCAGAAGGTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CCAGTGCGATTGGAGGATGAATTTGGTCCCTCTTCCTTCAGCTCTTaGTCTCCTTCAGCACTAGGGGTTCTGGCAGCCATTGAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: PVRLEDEFGPSSFSS*SPSALGVLAAIECC
Trigger: ACAGCACTCAATGGCTGCCAGAACCCCTAGTGCTGAAGGAGACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATCGCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp AACCTCACCTTTCTTGGTCTCCAGATGGGGCTTGCTGTGAAAGGCTaGAGACTTCTCTTCATCATGGTTCCCAGGCTCTGCACCAGCAAG +
Preference number: 6 (lower is better)
Translates to: NLTFLGLQMGLAVKG*RLLFIMVPRLCTSK
Trigger: CTTGCTGGTGCAGAGCCTGGGAACCATGATGAAGAGAAGTCTCAAGCCTTTCACAGCAAGCCCCATCTGGAGACCAAGAAAGGTGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp AGATGGACGCTTCTGGGTCTAGTTGAGATGGCTGGAGACGGTTCTTaGGAGATGGTGGGAGACTGTCCTCTGGGCAAGACAGTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: RWTLLGLVEMAGDGS*EMVGDCPLGKTVFS
Trigger: AGAGAAAACTGTCTTGCCCAGAGGACAGTCTCCCACCATCTCCAAAGAACCGTCTCCAGCCATCTCAACTAGACCCAGAAGCGTCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TCTCTGAGTTCAGTGAGACATCAGGACCCTCAAACAGCACATTCCTaGGAACTCCTGACTTTTTACTATGGGGCCGGTCAGCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: SLSSVRHQDPQTAHS*ELLTFYYGAGQQPG
Trigger: CCCTGGCTGCTGACCGGCCCCATAGTAAAAAGTCAGGAGTTCCAAGGAATGTGCTGTTTGAGGGTCCTGATGTCTCACTGAACTCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TCACTGAGGAGTTCTTCTGGAGCCACCAGGTGCAGCTTTTCATCTTaGCTCTCATCAGGCTCTGGAGGAGAAGAGATACTCGGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: SLRSSSGATRCSFSS*LSSGSGGEEILGFP
Trigger: TGGGAAGCCGAGTATCTCTTCTCCTCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp GAGTGGCTCTTCTTTACTTCCAATATATCCTCCATCTCCCCAGCTTaGGGTACCTCCTCCGCAGCTGTAGCAGGCAGGAAATCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: EWLFFTSNISSISPA*GTSSAAVAGRKSPF
Trigger: GAAAGGAGATTTCCTGCCTGCTACAGCTGCGGAGGAGGTACCCAAAGCTGGGGAGATGGAGGATATATTGGAAGTAAAGAAGAGCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TCCTCCAGCCAGCATTTTGGGGGCATCCTGGTTGCCCAGCATATTTaGCATGTTTGCAGTACTGACAGCAGCTTCAATCTGTCTGTCACC +
Preference number: 6 (lower is better)
Translates to: SSSQHFGGILVAQHI*HVCSTDSSFNLSVT
Trigger: GGTGACAGACAGATTGAAGCTGCTGTCAGTACTGCAAACATGCAAAATATGCTGGGCAACCAGGATGCCCCCAAAATGCTGGCTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CGCTTTGGAGACTTCTTCACCGTCTTTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCATCCCCATCCGCTTCCGTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RFGDFFTVFSGVFFF*AGLFNPSPSASVVL
Trigger: CAGCACCACGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGGTGAAGAAGTCTCCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS TCA 72 bp ATCTGCCCAAGGCTTCCTTTCCTCAGGTACCAGGATTaGGGAAGGATCTGTACTCTGCTTCTTCAGACCTGG +
Preference number: 6 (lower is better)
Translates to: ICPRLPFLRYQD*GRICTLLLQTW
Trigger: CCAGGTCTGAAGAAGCAGAGTACAGATCCTTCCTCAATCCTGGTACCTGAGGAAAGGAAGCCTTGGGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp TGTCCCCATCTGCAGTTCCTGGTTGCAAGACTGTGGTaGAGGAGACAGCAGGTGTCTTTTCAAGGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: CPHLQFLVARLW*RRQQVSFQGCH
Trigger: ATGACACCCTTGAAAAGACACCTGCTGTCTCCTTCACCACAGTCTTGCAACCAGGAACTGCAGATGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CCAGAACTTTATCCTTGGGTGATGAACTTGGAGTATTaGATGGGCTGCCTTTGGAGGGAAGCTCTGACCCCT +
Preference number: 6 (lower is better)
Translates to: PELYPWVMNLEY*MGCLWREALTP
Trigger: AGGGGTCAGAGCTTCCCTCCAAAGGCAGCCCATGCAATACTCCAAGTTCATCACCCAAGGATAAAGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp CTCAGAGGAAACGGCTCCTCTCGTGCTTCCATCTTCTaGATCCTTCCTGGCAGCACTATTGATATGCAGGTA +
Preference number: 6 (lower is better)
Translates to: LRGNGSSRASIF*ILPGSTIDMQV
Trigger: TACCTGCATATCAATAGTGCTGCCAGGAAGGATGCAGAAGATGGAAGCACGAGAGGAGCCGTTTCCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GGGGGCATCCTGGTTGCCCAGCATATTTTGCATGTTTaGAGTACTGACAGCAGCTTCAATCTGTCTGTCACC +
Preference number: 6 (lower is better)
Translates to: GGILVAQHILHV*STDSSFNLSVT
Trigger: GGTGACAGACAGATTGAAGCTGCTGTCAGTACTGCAAACATGCAAAATATGCTGGGCAACCAGGATGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GCTTCCGTTCTGCCACCCCTGTATCCATCTGTTCTGTaGCAGCCAGATCTGCAGAAACTGACATCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: ASVLPPLYPSVL*QPDLQKLTSLS
Trigger: AGACAAAGATGTCAGTTTCTGCAGATCTGGCTGCCACAGAACAGATGGATACAGGGGTGGCAGAACGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTTCTTGGTCTCCAGATGGGGCTTGCTGTGAAAGGCTaGAGACTTCTCTTCATCATGGTTCCCAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: FLGLQMGLAVKG*RLLFIMVPRLC
Trigger: GCAGAGCCTGGGAACCATGATGAAGAGAAGTCTCAAGCCTTTCACAGCAAGCCCCATCTGGAGACCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ACAGCAAGTCCATGGCCTATTGTTGAGTCTTTCCCATaGCGGGGAGATGACGCATCAGCATGGACTTCCTGT +
Preference number: 6 (lower is better)
Translates to: TASPWPIVESFP*RGDDASAWTSC
Trigger: ACAGGAAGTCCATGCTGATGCGTCATCTCCCCGCAATGGGAAAGACTCAACAATAGGCCATGGACTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CATCTGCCCAAGGCTTCCTTTCCTCAGGTACCAGGATaGAGGAAGGATCTGTACTCTGCTTCTTCAGACCTG +
Preference number: 6 (lower is better)
Translates to: HLPKASFPQVPG*RKDLYSASSDL
Trigger: CAGGTCTGAAGAAGCAGAGTACAGATCCTTCCTCAATCCTGGTACCTGAGGAAAGGAAGCCTTGGGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp GGTGTGAGTAGGGTCCCAGGTACCATCTTCTCTTTGTaGACCGTTGCTGGGCAATGTTTCCAGGTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: GVSRVPGTIFSL*TVAGQCFQVLF
Trigger: AAAGAGCACCTGGAAACATTGCCCAGCAACGGTCAACAAAGAGAAGATGGTACCTGGGACCCTACTCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TCCTGGAGAGGAACTAGGGAAATTCCTGGCAATTGGCCAGTGCGATaGGAGGATGAATTTGGTCCCTCTTCCTTCAGCTCTTTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: SWRGTREIPGNWPVR*EDEFGPSSFSSLSP
Trigger: AGGAGACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATCGCACTGGCCAATTGCCAGGAATTTCCCTAGTTCCTCTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TCTTGGGGGCCTTGGGACCATCAGTTGGTTCCACTGAACTTTCATTaGAAATGCCATGGGAGAAAGTTGGCAGCAACAGCCCTTGTTGGA +
Preference number: 6 (lower is better)
Translates to: SWGPWDHQLVPLNFH*KCHGRKLAATALVG
Trigger: TCCAACAAGGGCTGTTGCTGCCAACTTTCTCCCATGGCATTTCAAATGAAAGTTCAGTGGAACCAACTGATGGTCCCAAGGCCCCCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp CAGACCTGGGTCACTTTGACAAGCCTTTTGCCCATTTGTAGGTGGTaGGTTCTTGTCACAGAGAATAGCAGAGATGGACGCTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: QTWVTLTSLLPICRW*VLVTENSRDGRFWV
Trigger: GACCCAGAAGCGTCCATCTCTGCTATTCTCTGTGACAAGAACCAACCACCTACAAATGGGCAAAAGGCTTGTCAAAGTGACCCAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp ACAAGCTCACATCTGCCCAAGGCTTCCTTTCCTCAGGTACCAGGATaGAGGAAGGATCTGTACTCTGCTTCTTCAGACCTGGGTCACTTT +
Preference number: 6 (lower is better)
Translates to: TSSHLPKASFPQVPG*RKDLYSASSDLGHF
Trigger: AAAGTGACCCAGGTCTGAAGAAGCAGAGTACAGATCCTTCCTCAATCCTGGTACCTGAGGAAAGGAAGCCTTGGGCAGATGTGAGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp GGAAATTCCTGGCAATTGGCCAGTGCGATTGGAGGATaGATTTGGTCCCTCTTCCTTCAGCTCTTTGTCTCC +
Preference number: 6 (lower is better)
Translates to: GNSWQLASAIGG*IWSLFLQLFVS
Trigger: GGAGACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATCGCACTGGCCAATTGCCAGGAATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp TTGTTGGACTGTATCATTTTGCCCCTGCAAGAAAGGTaGAGGAACCTGCTGGAGGCTACCTTCTGGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LLDCIILPLQER*RNLLEATFWLF
Trigger: GAACAACCAGAAGGTAGCCTCCAGCAGGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATACAGTCCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp ATACTGTCACTGAGGAGTTCTTCTGGAGCCACCAGGTaGAGCTTTTCATCTTTGCTCTCATCAGGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: ILSLRSSSGATR*SFSSLLSSGSG
Trigger: TCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084513.12
CDS GCA 72 bp TTTCTGTCACTGAGGAGTTCTTCTGGAGCCACCAGGTaGAGCTTTTCATCTTTGCTCTCATCAGGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: FLSLRSSSGATR*SFSSLLSSGSG
Trigger: TCCAGAGCCTGATGAGAGCAAAGATGAAAAGCTGCACCTGGTGGCTCCAGAAGAACTCCTCAGTGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207918.2
CDS CCA 72 bp CTGGGCTTTTGGTCTGAGATCTTGAACTTTCCCAGATaGCTTCTTGGGGAAGAAAGTGCTCACCAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: LGFWSEILNFPR*LLGEESAHQCH
Trigger: ATGGCACTGGTGAGCACTTTCTTCCCCAAGAAGCCATCTGGGAAAGTTCAAGATCTCAGACCAAAAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GCAGATCCACCTTTACCATCTCGTTCCTCTGCTTTCTaGAAACTTCCAAGAGGACTCTGTGCTTCTGTACCC +
Preference number: 6 (lower is better)
Translates to: ADPPLPSRSSAF*KLPRGLCASVP
Trigger: GGGTACAGAAGCACAGAGTCCTCTTGGAAGTTTCCAGAAAGCAGAGGAACGAGATGGTAAAGGTGGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp TCTCCAGGACCAGCTGCTGTACAGTTTGGTGGGAGATaGATTTTTCTCTCTGTTCGTCCGATCATCTGTGCA +
Preference number: 6 (lower is better)
Translates to: SPGPAAVQFGGR*IFLSVRPIICA
Trigger: TGCACAGATGATCGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 72 bp TGCTCCTTCTCCAGGACCAGCTGCTGTACAGTTTGGTaGGAGATGGATTTTTCTCTCTGTTCGTCCGATCAT +
Preference number: 6 (lower is better)
Translates to: CSFSRTSCCTVW*EMDFSLCSSDH
Trigger: ATGATCGGACGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CAA 72 bp TTGGAGGATGAATTTGGTCCCTCTTCCTTCAGCTCTTaGTCTCCTTCAGCACTAGGGGTTCTGGCAGCCATT +
Preference number: 6 (lower is better)
Translates to: LEDEFGPSSFSS*SPSALGVLAAI
Trigger: AATGGCTGCCAGAACCCCTAGTGCTGAAGGAGACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTCCTGGCAATTGGCCAGTGCGATTGGAGGATGAATTaGGTCCCTCTTCCTTCAGCTCTTTGTCTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: FLAIGQCDWRMN*VPLPSALCLLQ
Trigger: CTGAAGGAGACAAAGAGCTGAAGGAAGAGGGACCAAATTCATCCTCCAATCGCACTGGCCAATTGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTCTTTACTTCCAATATATCCTCCATCTCCCCAGCTTaGGGTACCTCCTCCGCAGCTGTAGCAGGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: FFTSNISSISPA*GTSSAAVAGRK
Trigger: TTTCCTGCCTGCTACAGCTGCGGAGGAGGTACCCAAAGCTGGGGAGATGGAGGATATATTGGAAGTAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ACTGTCCTCTGGGCAAGACAGTTTTCTCTGACAGTCTaGTTCCAGACTGAGCACAGCAAGTCCATGGCCTAT +
Preference number: 6 (lower is better)
Translates to: TVLWARQFSLTV*FQTEHSKSMAY
Trigger: ATAGGCCATGGACTTGCTGTGCTCAGTCTGGAACAAGACTGTCAGAGAAAACTGTCTTGCCCAGAGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp GTGCTCCTTCCAGAACTTTATCCTTGGGTGATGAACTaGGAGTATTGCATGGGCTGCCTTTGGAGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: VLLPELYPWVMN*EYCMGCLWREA
Trigger: AGCTTCCCTCCAAAGGCAGCCCATGCAATACTCCAAGTTCATCACCCAAGGATAAAGTTCTGGAAGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ATCTCTGACGGTGGTGCTCCTTCCAGAACTTTATCCTaGGGTGATGAACTTGGAGTATTGCATGGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: ISDGGAPSRTLS*GDELGVLHGLP
Trigger: AGGCAGCCCATGCAATACTCCAAGTTCATCACCCAAGGATAAAGTTCTGGAAGGAGCACCACCGTCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TCAGTGAGACATCAGGACCCTCAAACAGCACATTCCTaGGAACTCCTGACTTTTTACTATGGGGCCGGTCAG +
Preference number: 6 (lower is better)
Translates to: SVRHQDPQTAHS*ELLTFYYGAGQ
Trigger: CTGACCGGCCCCATAGTAAAAAGTCAGGAGTTCCAAGGAATGTGCTGTTTGAGGGTCCTGATGTCTCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp ATAGGAGTTTCTGTAGTCCAGCTCTTTTCTGGCTCTTaGCCCCCTAGGGACAGTATTCTCCAAGGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: IGVSVVQLFSGS*PPRDSILQGKV
Trigger: CACCTTGCCTTGGAGAATACTGTCCCTAGGGGGCAAAGAGCCAGAAAAGAGCTGGACTACAGAAACTCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084513.12
ENSMUST00000207395.2
CDS CAA 90 bp GACATCACATCTTCAACCATCGTCTTTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCATCCCCATCCGCTTCCGTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: DITSSTIVFSGVFFF*AGLFNPSPSASVVL
Trigger: CAGCACCACGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGATGGTTGAAGATGTGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CAA 90 bp TTCAATTTCATAGGAGTTTCTGTAGTCCAGCTCTTTTCTGGCTCTTaGCCCCCTAGGGACAGTATTCTCCAAGGCAAGGTGTGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: FNFIGVSVVQLFSGS*PPRDSILQGKVWVW
Trigger: CCAGACCCACACCTTGCCTTGGAGAATACTGTCCCTAGGGGGCAAAGAGCCAGAAAAGAGCTGGACTACAGAAACTCCTATGAAATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084513.12
ENSMUST00000207395.2
CDS TCA 72 bp GTCCTGAAGCATGACTGGGCTTTTGGTCTGAGATCTTaGACTTTCCCAGATGGCTTCTTGGGGAAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: VLKHDWAFGLRS*TFPDGFLGKKV
Trigger: CACTTTCTTCCCCAAGAAGCCATCTGGGAAAGTTCAAGATCTCAGACCAAAAGCCCAGTCATGCTTCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp ACTCTATTGCTTCCAATCCTCCCCTGTCCTGAAGCATaGCTGGGCTTTTGGTCTGAGATCTTGAACTTTCCC +
Preference number: 6 (lower is better)
Translates to: TLLLPILPCPEA*LGFWSEILNFP
Trigger: GGGAAAGTTCAAGATCTCAGACCAAAAGCCCAGTCATGCTTCAGGACAGGGGAGGATTGGAAGCAATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GCAGGAACCTGCTGGAGGCTACCTTCTGGTTGTTCTTaGGTTTTTCTAAGATCTGATGTTGGCTTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: AGTCWRLPSGCS*VFLRSDVGFRS
Trigger: AGAACGGAAGCCAACATCAGATCTTAGAAAAACGCAAGAACAACCAGAAGGTAGCCTCCAGCAGGTTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS GCA 72 bp GTATCATTTTGCCCCTGCAAGAAAGGTGCAGGAACCTaGTGGAGGCTACCTTCTGGTTGTTCTTGCGTTTTT +
Preference number: 6 (lower is better)
Translates to: VSFCPCKKGAGT*WRLPSGCSCVF
Trigger: AAAAACGCAAGAACAACCAGAAGGTAGCCTCCAGCAGGTTCCTGCACCTTTCTTGCAGGGGCAAAATGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp CTTCAACCATCGTCTTTAGTGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCATCCCCATCCGCTTCCG +
Preference number: 6 (lower is better)
Translates to: LQPSSLVESSSS*QVYSTHPHPLP
Trigger: CGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGATGGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CCA 72 bp GACCGTTGCTGGGCAATGTTTCCAGGTGCTCTTTTATaGAATGGCTTTTGTCACCTTGAGCAGAAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: DRCWAMFPGALL*NGFCHLEQKPH
Trigger: ATGAGGCTTCTGCTCAAGGTGACAAAAGCCATTCCATAAAAGAGCACCTGGAAACATTGCCCAGCAACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp ACTTCTTCACCGTCTTTAGTGGAGTCTTCTTCTTCTTaGCAGGTTTATTCAACCCATCCCCATCCGCTTCCG +
Preference number: 6 (lower is better)
Translates to: TSSPSLVESSSS*QVYSTHPHPLP
Trigger: CGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGGTGAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS CAA 72 bp CCTTGGGACCATCAGTTGGTTCCACTGAACTTTCATTaGAAATGCCATGGGAGAAAGTTGGCAGCAACAGCC +
Preference number: 6 (lower is better)
Translates to: PWDHQLVPLNFH*KCHGRKLAATA
Trigger: GGCTGTTGCTGCCAACTTTCTCCCATGGCATTTCAAATGAAAGTTCAGTGGAACCAACTGATGGTCCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CTGCTTCTTCAGACCTGGGTCACTTTGACAAGCCTTTaGCCCATTTGTAGGTGGTTGGTTCTTGTCACAGAG +
Preference number: 6 (lower is better)
Translates to: LLLQTWVTLTSL*PICRWLVLVTE
Trigger: CTCTGTGACAAGAACCAACCACCTACAAATGGGCAAAAGGCTTGTCAAAGTGACCCAGGTCTGAAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CCACCGAGTTGCTTACCCTCTGAGGGTGAATTGAATTaGGTCTCATTTACAAAGTTAGACAGGTCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: PPSCLPSEGELN*VSFTKLDRSEG
Trigger: GCCCTCGGACCTGTCTAACTTTGTAAATGAGACCAAATTCAATTCACCCTCAGAGGGTAAGCAACTCGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS CAA 72 bp GGCTGGCCACCGAGTTGCTTACCCTCTGAGGGTGAATaGAATTTGGTCTCATTTACAAAGTTAGACAGGTCC +
Preference number: 6 (lower is better)
Translates to: GWPPSCLPSEGE*NLVSFTKLDRS
Trigger: GGACCTGTCTAACTTTGTAAATGAGACCAAATTCAATTCACCCTCAGAGGGTAAGCAACTCGGTGGCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207376.2
ENSMUST00000207395.2
CDS CAA 72 bp GACTTCTTCACCGTCTTTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCATCCCCATCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: DFFTVFSGVFFF*AGLFNPSPSAS
Trigger: GGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGGTGAAGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207376.2
ENSMUST00000207549.2
CDS CAA 90 bp AGTCTGAGCTGGGAACGATTTTGTTCTCTGTATTACTGTGTGCCTTaGAAACCTCACCTTTCTTGGTCTCCAGATGGGGCTTGCTGTGAA +
Preference number: 6 (lower is better)
Translates to: SLSWERFCSLYYCVP*KPHLSWSPDGACCE
Trigger: TTCACAGCAAGCCCCATCTGGAGACCAAGAAAGGTGAGGTTTCAAAGGCACACAGTAATACAGAGAACAAAATCGTTCCCAGCTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp GCTACCTTCTGGTTGTTCTTGCGTTTTTCTAAGATCTaGTGTTGGCTTCCGTTCTGCCACCCCTGTATCCAT +
Preference number: 6 (lower is better)
Translates to: ATFWLFLRFSKI*CWLPFCHPCIH
Trigger: ATGGATACAGGGGTGGCAGAACGGAAGCCAACATCAGATCTTAGAAAAACGCAAGAACAACCAGAAGGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS TCA 72 bp GGCAAGACAGTTTTCTCTGACAGTCTTGTTCCAGACTaGGCACAGCAAGTCCATGGCCTATTGTTGAGTCTT +
Preference number: 6 (lower is better)
Translates to: GKTVFSDSLVPD*AQQVHGLLLSL
Trigger: AAGACTCAACAATAGGCCATGGACTTGCTGTGCTCAGTCTGGAACAAGACTGTCAGAGAAAACTGTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GATCCAGGGATAGCTCTGGAGTTGCTTTTAGAGGGATaGCAGCCTTCGAGAAATTCCAAATTCTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: DPGIALELLLEG*QPSRNSKFLAE
Trigger: TTCAGCCAAGAATTTGGAATTTCTCGAAGGCTGCCATCCCTCTAAAAGCAACTCCAGAGCTATCCCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CCA 72 bp GTATTCAATTTCATAGGAGTTTCTGTAGTCCAGCTCTaGCTGGCAAGTACCTTTTCTGGCTCTTTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: VFNFIGVSVVQL*LASTFSGSLPP
Trigger: AGGGGGCAAAGAGCCAGAAAAGGTACTTGCCAGCCAGAGCTGGACTACAGAAACTCCTATGAAATTGAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207376.2
CDS CAA 72 bp TCTTCAACCATCGTCTTTAGTGGAGTCTTCTTCTTCTaGGCAGGTTTATTCAACCCATCCCCATCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: SSTIVFSGVFFF*AGLFNPSPSAS
Trigger: GGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGATGGTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033141.7
ENSMUST00000059145.14
ENSMUST00000084513.12
ENSMUST00000208722.2
ENSMUST00000208743.2
CDS CAA 72 bp GTCACTTTGACAAGCCTTTTGCCCATTTGTAGGTGGTaGGTTCTTGTCACAGAGAATAGCAGAGATGGACGC +
Preference number: 6 (lower is better)
Translates to: VTLTSLLPICRW*VLVTENSRDGR
Trigger: GCGTCCATCTCTGCTATTCTCTGTGACAAGAACCAACCACCTACAAATGGGCAAAAGGCTTGTCAAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TTCCAGGTGCTCTTTTATGGAATGGCTTTTGTCACCTaGAGCAGAAGCCTCATCTACATCTGCATGGCTCTG +
Preference number: 6 (lower is better)
Translates to: FQVLFYGMAFVT*SRSLIYICMAL
Trigger: CAGAGCCATGCAGATGTAGATGAGGCTTCTGCTCAAGGTGACAAAAGCCATTCCATAAAAGAGCACCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp TATCCATCTGTTCTGTGGCAGCCAGATCTGCAGAAACTGACATCTTaGTCTCAGAAACAGTCTCTGTGGATTCTTCTGAGGCAACCGAAT +
Preference number: 6 (lower is better)
Translates to: YPSVLWQPDLQKLTS*SQKQSLWILLRQPN
Trigger: ATTCGGTTGCCTCAGAAGAATCCACAGAGACTGTTTCTGAGACAAAGATGTCAGTTTCTGCAGATCTGGCTGCCACAGAACAGATGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 90 bp ACCTCCTGTCTAAGTGGCTGTGTTGAGTCTGAGCTGGGAACGATTTaGTTCTCTGTATTACTGTGTGCCTTTGAAACCTCACCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: TSCLSGCVESELGTI*FSVLLCAFETSPFL
Trigger: CAAGAAAGGTGAGGTTTCAAAGGCACACAGTAATACAGAGAACAAAATCGTTCCCAGCTCAGACTCAACACAGCCACTTAGACAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp TGGGAACGATTTTGTTCTCTGTATTACTGTGTGCCTTaGAAACCTCACCTTTCTTGGTCTCCAGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: WERFCSLYYCVP*KPHLSWSPDGA
Trigger: AGCCCCATCTGGAGACCAAGAAAGGTGAGGTTTCAAAGGCACACAGTAATACAGAGAACAAAATCGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2
CDS CAA 72 bp CTAAGTGGCTGTGTTGAGTCTGAGCTGGGAACGATTTaGTTCTCTGTATTACTGTGTGCCTTTGAAACCTCA +
Preference number: 6 (lower is better)
Translates to: LSGCVESELGTI*FSVLLCAFETS
Trigger: TGAGGTTTCAAAGGCACACAGTAATACAGAGAACAAAATCGTTCCCAGCTCAGACTCAACACAGCCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084513.12
ENSMUST00000207918.2
ENSMUST00000215492.2