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Pregenerated sensors for TAC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025400

Ensembl transcript IDs: ENSMUST00000026466.5, ENSMUST00000179960.8

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGAGAGATAGCATTTTTAATGCAGGACACTACAGAAACCATAATTaGTATGGGGTTGAGGCTGTTCATATGCAGCTTCTATGCAGAGTA +
Preference number: 1 (lower is better)
Translates to: KRDSIFNAGHYRNHN*YGVEAVHMQLLCRV
Trigger: TACTCTGCATAGAAGCTGCATATGAACAGCCTCAACCCCATAGCAATTATGGTTTCTGTAGTGTCCTGCATTAAAAATGCTATCTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
3UTR GCA 72 bp TGCTATGGGGTTGAGGCTGTTCATATGCAGCTTCTATaGAGAGTAGGGAAGGGAGCCAACAGGAGGACCTTA +
Preference number: 3 (lower is better)
Translates to: CYGVEAVHMQLL*RVGKGANRRTL
Trigger: TAAGGTCCTCCTGTTGGCTCCCTTCCCTACTCTGCATAGAAGCTGCATATGAACAGCCTCAACCCCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS-3UTR CAA 90 bp AGAGTAGGGAAGGGAGCCAACAGGAGGACCTTACAGGCAGGGGAGGAGAAGAGGGGTGGGAGTGTCTGGTaGGCTGTTCCTCTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: RVGKGANRRTLQAGEEKRGGSVW*AVPLAH
Trigger: ATGGGCAAGAGGAACAGCCAACCAGACACTCCCACC...CCTCTTCTCCTCCCCTGCCTGTAAGGTCCTCCTGTTGGCTCCCTTCCCTACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS-3UTR CAA 90 bp AGGAAGCAGGAGCAGGCACTGCTTTATGATGCAATCCGGGGTCCAGGGGTAGAGGGTGGGAGTGTCTGGTaGGCTGTTCCTCTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: RKQEQALLYDAIRGPGVEGGSVW*AVPLAH
Trigger: ATGGGCAAGAGGAACAGCCAACCAGACACTCCCACC...CTCTACCCCTGGACCCCGGATTGCATCATAAAGCAGTGCCTGCTCCTGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS-3UTR CAA 90 bp AGGAAGCAGGAGCAGGCACTGCTTTATGATGCAATCCGGGGTCCAGGGGTAGAGGGTCCCACGCTAGCCTaGCTCAGCACTTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: RKQEQALLYDAIRGPGVEGPTLA*LSTFSN
Trigger: ATTGCTGAAAGTGCTGAGCAAGGCTAGCGTGGGACC...CTCTACCCCTGGACCCCGGATTGCATCATAAAGCAGTGCCTGCTCCTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS-3UTR CAA 90 bp TGCAGAGTAGGGAAGGGAGCCAACAGGAGGACCTTACAGGCAGGGGAGGAGAAGGGTTGGCTGTTCCTCTaGCCCATAAGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: CRVGKGANRRTLQAGEEKGWLFL*PISPTK
Trigger: CTTTGTGGGACTTATGGGCAAGAGGAACAGCCAACC...CTTCTCCTCCCCTGCCTGTAAGGTCCTCCTGTTGGCTCCCTTCCCTACTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CCA 90 bp AAGCTGGGGGTGTTCTCTTCAACCACGTCGGTGGGAGTGTCTGGTTaGCTGTTCCTCTTGCCCATAAGTCCCACAAAGAAGTCGTGCATG +
Preference number: 5 (lower is better)
Translates to: KLGVFSSTTSVGVSG*LFLLPISPTKKSCM
Trigger: CATGCACGACTTCTTTGTGGGACTTATGGGCAAGAGGAACAGCCAACCAGACACTCCCACCGACGTGGTTGAAGAGAACACCCCCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS-3UTR CAA 90 bp TGTAAAAACCCTTTATTGTTGACGAAGAGAGATAGCATTTTTAATGCAGGACACGGTCCCACGCTAGCCTaGCTCAGCACTTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: CKNPLLLTKRDSIFNAGHGPTLA*LSTFSN
Trigger: ATTGCTGAAAGTGCTGAGCAAGGCTAGCGTGGGACC...GTGTCCTGCATTAAAAATGCTATCTCTCTTCGTCAACAATAAAGGGTTTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CCA 72 bp GGGGGTGTTCTCTTCAACCACGTCGGTGGGAGTGTCTaGTTGGCTGTTCCTCTTGCCCATAAGTCCCACAAA +
Preference number: 6 (lower is better)
Translates to: GGVLFNHVGGSV*LAVPLAHKSHK
Trigger: TTTGTGGGACTTATGGGCAAGAGGAACAGCCAACCAGACACTCCCACCGACGTGGTTGAAGAGAACACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CAA 90 bp TCACGTTTCTGTGGAAGTGATGTCTCCTTTGGTCCCACGCTAGCCTaGCTCAGCACTTTCAGCAATCCTTCCAGAGAGACAGGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: SRFCGSDVSFGPTLA*LSTFSNPSRETGRL
Trigger: CAGCCGCCCTGTCTCTCTGGAAGGATTGCTGAAAGTGCTGAGCAAGGCTAGCGTGGGACCAAAGGAGACATCACTTCCACAGAAACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CAA 72 bp ACCACGTCGGTGGGAGTGTCTGGTTGGCTGTTCCTCTaGCCCATAAGTCCCACAAAGAAGTCGTGCATGTCA +
Preference number: 6 (lower is better)
Translates to: TTSVGVSGWLFL*PISPTKKSCMS
Trigger: TGACATGCACGACTTCTTTGTGGGACTTATGGGCAAGAGGAACAGCCAACCAGACACTCCCACCGACGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CCA 72 bp GTGTTCTCTTCAACCACGTCGGTGGGAGTGTCTGGTTaGCTGTTCCTCTTGCCCATAAGTCCCACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: VFSSTTSVGVSG*LFLLPISPTKK
Trigger: CTTCTTTGTGGGACTTATGGGCAAGAGGAACAGCCAACCAGACACTCCCACCGACGTGGTTGAAGAGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CAA 90 bp TTCTCTTCAACCACGTCGGTGGGAGTGTCTGGTTGGCTGTTCCTCTaGCCCATAAGTCCCACAAAGAAGTCGTGCATGTCACGTTTCTGT +
Preference number: 6 (lower is better)
Translates to: FSSTTSVGVSGWLFL*PISPTKKSCMSRFC
Trigger: ACAGAAACGTGACATGCACGACTTCTTTGTGGGACTTATGGGCAAGAGGAACAGCCAACCAGACACTCCCACCGACGTGGTTGAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS TCA 72 bp CACAAAGAAGTCGTGCATGTCACGTTTCTGTGGAAGTaGTGTCTCCTTTGGTCCCACGCTAGCCTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: HKEVVHVTFLWK*CLLWSHASLAQ
Trigger: CTGAGCAAGGCTAGCGTGGGACCAAAGGAGACATCACTTCCACAGAAACGTGACATGCACGACTTCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8
CDS CAA 72 bp TGTGGAAGTGATGTCTCCTTTGGTCCCACGCTAGCCTaGCTCAGCACTTTCAGCAATCCTTCCAGAGAGACA +
Preference number: 6 (lower is better)
Translates to: CGSDVSFGPTLA*LSTFSNPSRET
Trigger: TGTCTCTCTGGAAGGATTGCTGAAAGTGCTGAGCAAGGCTAGCGTGGGACCAAAGGAGACATCACTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026466.5
ENSMUST00000179960.8