Pregenerated sensors for TAB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035476Ensembl transcript IDs: ENSMUST00000048250.10, ENSMUST00000137438.2, ENSMUST00000146063.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTaGGGATCGACAGGAAACCCACCTTACAAGCCTTTCACCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: KARAPLRTVGLLDCF*GSTGNPPYKPFTLS Trigger: GGAAAGGGTGAAAGGCTTGTAAGGTGGGTTTCCTGTCGATCCCCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTaGTTCTGGGGATCGACAGGAAACCCACCTTACAAGCCTTTCACC | + |
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Preference number: 1 (lower is better) Translates to: YTKARAPLRTVGLLD*FWGSTGNPPYKPFT Trigger: GGTGAAAGGCTTGTAAGGTGGGTTTCCTGTCGATCCCCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 90 bp | CCTCCACATCAGTATCCAGCAACTTCCATAGTAGTATCCACCATATaGCACCTGCTTATGGATGCCAATCTGAGCAGGAGAACATTCTGG | + |
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Preference number: 1 (lower is better) Translates to: PPHQYPATSIVVSTI*HLLMDANLSRRTFW Trigger: CCAGAATGTTCTCCTGCTCAGATTGGCATCCATAAGCAGGTGGCATATGGTGGATACTACTATGGAAGTTGCTGGATACTGATGTGGAGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 90 bp | CTATTCAGTCTCAAAGCAAGTTTTCATGGCTTTAGAAACTCAGACTaGCTCATCGCTCGCTTATCTTTGAATGCCCAAGCCATGCACAAT | + |
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Preference number: 1 (lower is better) Translates to: LFSLKASFHGFRNSD*LIARLSLNAQAMHN Trigger: ATTGTGCATGGCTTGGGCATTCAAAGATAAGCGAGCGATGAGTCAGTCTGAGTTTCTAAAGCCATGAAAACTTGCTTTGAGACTGAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 90 bp | TTCATGGCTTTAGAAACTCAGACTGACTCATCGCTCGCTTATCTTTaGATGCCCAAGCCATGCACAATTCTACTTGTACTAAGTATTTGG | + |
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Preference number: 1 (lower is better) Translates to: FMALETQTDSSLAYL*MPKPCTILLVLSIW Trigger: CCAAATACTTAGTACAAGTAGAATTGTGCATGGCTTGGGCATTCAAAGATAAGCGAGCGATGAGTCAGTCTGAGTTTCTAAAGCCATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 90 bp | GAGAGCTGTGACCAAGTAAGTCTGCTCTGGAATTCACAGTTTGTCTaGATAAACTGTAACATGTCCTACCATAATCCAAAGTTCACCTTT | + |
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Preference number: 1 (lower is better) Translates to: ESCDQVSLLWNSQFV*INCNMSYHNPKFTF Trigger: AAAGGTGAACTTTGGATTATGGTAGGACATGTTACAGTTTATGCAGACAAACTGTGAATTCCAGAGCAGACTTACTTGGTCACAGCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 90 bp | GAACCACAACTGAGCTTAGAATTTCCAATGGTTTTGGAATGGACTTaGATTTGGCATACATTCAGTGTGCTACTGGCAAAGCACAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: EPQLSLEFPMVLEWT*IWHTFSVLLAKHSF Trigger: AAAACTGTGCTTTGCCAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAAGCTCAGTTGTGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 90 bp | GAAAACTACAATGAGCTATGCCTTTGGTTTCAATATGCTATTGAGTaGAGCTTCTTTTTCCAGGTCTGGCAGCGATTTCTGCTTAATGAG | + |
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Preference number: 1 (lower is better) Translates to: ENYNELCLWFQYAIE*SFFFQVWQRFLLNE Trigger: CTCATTAAGCAGAAATCGCTGCCAGACCTGGAAAAAGAAGCTGCACTCAATAGCATATTGAAACCAAAGGCATAGCTCATTGTAGTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR CCA 90 bp | CAACTGAGCTTAGAATTTCCAATGGTTTTGGAATGGACTTGCATTTaGCATACATTCAGTGTGCTACTGGCAAAGCACAGTTTTATGAGA | + |
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Preference number: 1 (lower is better) Translates to: QLSLEFPMVLEWTCI*HTFSVLLAKHSFMR Trigger: TCTCATAAAACTGTGCTTTGCCAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAAGCTCAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 90 bp | ACATCATGTATTCATTACAAACCAGAAGTAGGGGGCCCTGTATACTaGAAGCATTTCTTAAGAACCACAACTGAGCTTAGAATTTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: TSCIHYKPEVGGPVY*KHFLRTTTELRISN Trigger: ATTGGAAATTCTAAGCTCAGTTGTGGTTCTTAAGAAATGCTTGCAGTATACAGGGCCCCCTACTTCTGGTTTGTAATGAATACATGATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACCCACTTTTCCTTTCCTaGGCCAGGGCACCATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHPLFLS*ARAPFP Trigger: GGGGAATGGTGCCCTGGCTCAGGAAAGGAAAAGTGG...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAGTTTCCAGAGAGCTGTaGCCAAGTAAGTCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TKWLCIQELGTDLVFLRLVSREL*PSKSAL Trigger: CAGAGCAGACTTACTTGGTCACAGCTCTCTGGAAAC...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAGGGGGCCCTGTATACTaGAAGCATTTCTTAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: TKWLCIQELGTDLVFLRLGGPVY*KHFLRT Trigger: GGTTCTTAAGAAATGCTTGCAGTATACAGGGCCCCC...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGCCAATGGTTTTGGAATaGACTTGCATTTGGCATACA | + |
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Preference number: 2 (lower is better) Translates to: YTKARAPLRTVGLLDCFWPMVLE*TCIWHT Trigger: TGTATGCCAAATGCAAGTCCATTCCAAAACCATTGG...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR CAA 90 bp | GAAAAGGCTGGGCAGATGAACACAATCCCAAAGTTTCCTTTTCTTTaGGTGAGTGCTCAAAGTTTCACTCTCAACCTGGTGTCAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: EKAGQMNTIPKFPFL*VSAQSFTLNLVSTL Trigger: AAGAGTTGACACCAGGTTGAGAGTGAAACTTTGAGCACTCACCAAAAGAAAAGGAAACTTTGGGATTGTGTTCATCTGCCCAGCCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTCTTTCATGGTCAACTaGCAAGTGTCATGCTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHSFMVN*QVSCCR Trigger: CCGACAGCATGACACTTGTCAGTTGACCATGAAAGA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCAAGTTACCAGTGTCAATaGAGCTTGATGAACCATTGT | + |
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Preference number: 2 (lower is better) Translates to: HMLLSWSTDKCHAVGISASYQCQ*SLMNHC Trigger: ACAATGGTTCATCAAGCTGCATTGACACTGGTAACT...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACGGCATACATTCAGTGTaGTACTGGCAAAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHGIHSV*YWQSTV Trigger: AACTGTGCTTTGCCAGTAGCACACTGAATGTATGCC...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGATACATCACAGCAAGTaGCCTGATTTGTTATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: YTKARAPLRTVGLLDCFWIHHSK*PDLLSF Trigger: AAAAGATAACAAATCAGGCCACTTGCTGTGATGTAT...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGAATGAGCTATGCCTTTaGTTTCAATATGCTATTGAG | + |
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Preference number: 2 (lower is better) Translates to: YTKARAPLRTVGLLDCFWNELCL*FQYAIE Trigger: CTCAATAGCATATTGAAACCAAAGGCATAGCTCATT...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR CAA 90 bp | AGAACCACAACTGAGCTTAGAATTTCCAATGGTTTTGGAATGGACTaGCATTTGGCATACATTCAGTGTGCTACTGGCAAAGCACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: RTTTELRISNGFGMD*HLAYIQCATGKAQF Trigger: AAACTGTGCTTTGCCAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAAGCTCAGTTGTGGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR TCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCAGTTTCAATATGCTATTaGGTGCAGCTTCTTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HMLLSWSTDKCHAVGISAVSICY*VQLLFP Trigger: TGGAAAAAGAAGCTGCACTCAATAGCATATTGAAAC...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTTTCTTAATGGCCCCTaGTGTCTCATACCTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHFLNGP*CLIPNF Trigger: GAAGTTAGGTATGAGACATCAGGGGCCATTAAGAAA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCAGTTTTGGAATGGACTTaGATTTGGCATACATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: HMLLSWSTDKCHAVGISAVLEWT*IWHTFS Trigger: ACTGAATGTATGCCAAATGCAAGTCCATTCCAAAAC...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCACATATGAAGGCTAGATaGGATGTAGAAGATTATGAC | + |
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Preference number: 2 (lower is better) Translates to: HMLLSWSTDKCHAVGISAHMKAR*DVEDYD Trigger: GTCATAATCTTCTACATCGCATCTAGCCTTCATATG...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR CAA 90 bp | ACAACTGAGCTTAGAATTTCCAATGGTTTTGGAATGGACTTGCATTaGGCATACATTCAGTGTGCTACTGGCAAAGCACAGTTTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: TTELRISNGFGMDLH*AYIQCATGKAQFYE Trigger: CTCATAAAACTGTGCTTTGCCAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAAGCTCAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTTCCTTTTCTTTTGGTaGGTGCTCAAAGTTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHFLFFW*VLKVSL Trigger: GAGTGAAACTTTGAGCACTCACCAAAAGAAAAGGAA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACCAGACTTTTCACACATaGTTCTTTCATGGTCAACTG | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHQTFHT*FFHGQL Trigger: CAGTTGACCATGAAAGAAGCATGTGTGAAAAGTCTG...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAAATTTCCAATGGTTTTaGAATGGACTTGCATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: TKWLCIQELGTDLVFLRLNFQWF*NGLAFG Trigger: GCCAAATGCAAGTCCATTCCAAAACCATTGGAAATT...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACGCTGTCTATGTTCACTaGAATGGGGAAAAATTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHAVYVH*NGEKFQ Trigger: TTGGAATTTTTCCCCATTCCAGTGAACATAGACAGC...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACAGTGACAGTACAAAGTaGTTGTGTATACAGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHSDSTK*LCIQEL Trigger: CAACTCCTGTATACACAACCACTTTGTACTGTCACT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACCACATGCTTCTTTCATaGTCAACTGACAAGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHHMLLS*STDKCH Trigger: ATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACACACAATGGCTAACATaGTTTCTAAAGACCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SWEINKLATLSSTIINLHTQWLT*FLKTQF Trigger: AAACTGGGTCTTTAGAAAGCATGTTAGCCATTGTGT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTACTATGTTCACTGGAATaGGGAAAAATTCCAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: TKWLCIQELGTDLVFLRLLCSLE*GKIPKF Trigger: GAATTTTGGAATTTTTCCCCATTCCAGTGAACATAG...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 72 bp | GCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTaGTTCTGGGGATCGACAGGAAACCCACCTTACAAG | + |
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Preference number: 3 (lower is better) Translates to: ARAPLRTVGLLD*FWGSTGNPPYK Trigger: CTTGTAAGGTGGGTTTCCTGTCGATCCCCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR CCA 72 bp | GCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTaGGGATCGACAGGAAACCCACCTTACAAGCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: APLRTVGLLDCF*GSTGNPPYKPF Trigger: GAAAGGCTTGTAAGGTGGGTTTCCTGTCGATCCCCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR CCA 72 bp | ACCCACCTTACAAGCCTTTCACCCTTTCCAAGTCCATaGGTTTGCGCCTGTTTTCCCACCATTACGATTTTC | + |
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Preference number: 3 (lower is better) Translates to: THLTSLSPFPSP*VCACFPTITIF Trigger: GAAAATCGTAATGGTGGGAAAACAGGCGCAAACCCATGGACTTGGAAAGGGTGAAAGGCTTGTAAGGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 72 bp | CCTGATGTCTCATACCTAACTTCCATAGCAAGCAAATaGACTGGGGCCTCCTTTTTCCTGGCAGATGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: PDVSYLTSIASK*TGASFFLADES Trigger: GCTTTCATCTGCCAGGAAAAAGGAGGCCCCAGTTCATTTGCTTGCTATGGAAGTTAGGTATGAGACATCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 72 bp | CAGTATCCAGCAACTTCCATAGTAGTATCCACCATATaGCACCTGCTTATGGATGCCAATCTGAGCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QYPATSIVVSTI*HLLMDANLSRR Trigger: TCTCCTGCTCAGATTGGCATCCATAAGCAGGTGGCATATGGTGGATACTACTATGGAAGTTGCTGGATACTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTATCCACCTATAGCACCTaGTTAATGCCAGGCTACCGT | + |
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Preference number: 3 (lower is better) Translates to: TKWLCIQELGTDLVFLRLSTYST*LMPGYR Trigger: ACGGTAGCCTGGCATTAACAAGGTGCTATAGGTGGA...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR GCA 72 bp | CTTACAAGCCTTTCACCCTTTCCAAGTCCATGGGTTTaGGCCTGTTTTCCCACCATTACGATTTTCACAGTT | + |
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Preference number: 3 (lower is better) Translates to: LTSLSPFPSPWV*ACFPTITIFTV Trigger: AACTGTGAAAATCGTAATGGTGGGAAAACAGGCGCAAACCCATGGACTTGGAAAGGGTGAAAGGCTTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CAA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGAGTAACTGTAACAATTaGGATTCCATAGAAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: YTKARAPLRTVGLLDCFWSNCNN*DSIEEP Trigger: GGGCTCTTCTATGGAATCCAAATTGTTACAGTTACT...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 72 bp | GTAGTCTCGTCTCACTCCTTCATTAATGCAACTTTATaGTGTTGGCCAACTTCGCTTTCCCTCTCATTGGCT | + |
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Preference number: 3 (lower is better) Translates to: VVSSHSFINATL*CWPTSLSLSLA Trigger: AGCCAATGAGAGGGAAAGCGAAGTTGGCCAACATCATAAAGTTGCATTAATGAAGGAGTGAGACGAGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 72 bp | AGGTCTGGCAGCGATTTCTGCTTAATGAGAATACAGTaGCAGTACAAAGTGGTTGTGTATACAGGAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: RSGSDFCLMRIQ*QYKVVVYTGVG Trigger: CCCAACTCCTGTATACACAACCACTTTGTACTGTCACTGTATTCTCATTAAGCAGAAATCGCTGCCAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 72 bp | CTCAAAGCAAGTTTTCATGGCTTTAGAAACTCAGACTaGCTCATCGCTCGCTTATCTTTGAATGCCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: LKASFHGFRNSD*LIARLSLNAQA Trigger: GGCTTGGGCATTCAAAGATAAGCGAGCGATGAGTCAGTCTGAGTTTCTAAAGCCATGAAAACTTGCTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 72 bp | GAGCCCTTAACATCTCTGTGTACATTCTTACAGGAGTaGATTCAAGTATCCCCTTCTACCTCTCACTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: EPLTSLCTFLQE*IQVSPSTSHSV Trigger: TACAGAGTGAGAGGTAGAAGGGGATACTTGAATTCACTCCTGTAAGAATGTACACAGAGATGTTAAGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR TCA 72 bp | AAACCTTACCACGTCCAAAGCTTTCTTAATGGCCCCTaGTGTCTCATACCTAACTTCCATAGCAAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: KPYHVQSFLNGP*CLIPNFHSKQM Trigger: CATTTGCTTGCTATGGAAGTTAGGTATGAGACATCAGGGGCCATTAAGAAAGCTTTGGACGTGGTAAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACGGAATGGACTTGCATTaGGCATACATTCAGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SWEINKLATLSSTIINLHGMDLH*AYIQCA Trigger: AGCACACTGAATGTATGCCAAATGCAAGTCCATTCC...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR GCA 72 bp | ATTCATTACAAACCAGAAGTAGGGGGCCCTGTATACTaGAAGCATTTCTTAAGAACCACAACTGAGCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: IHYKPEVGGPVY*KHFLRTTTELR Trigger: TCTAAGCTCAGTTGTGGTTCTTAAGAAATGCTTGCAGTATACAGGGCCCCCTACTTCTGGTTTGTAATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CCA 72 bp | CCACAACTGAGCTTAGAATTTCCAATGGTTTTGGAATaGACTTGCATTTGGCATACATTCAGTGTGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: PQLSLEFPMVLE*TCIWHTFSVLL Trigger: CAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAAGCTCAGTTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACGGTTTTGGAATGGACTaGCATTTGGCATACATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SWEINKLATLSSTIINLHGFGMD*HLAYIQ Trigger: CTGAATGTATGCCAAATGCAAGTCCATTCCAAAACC...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCAAGCAAGTGGCCTGATTaGTTATCTTTTTCAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HMLLSWSTDKCHAVGISASKWPD*LSFSVY Trigger: ATACACTGAAAAAGATAACAAATCAGGCCACTTGCT...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACGAATTTCCAATGGTTTaGGAATGGACTTGCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWEINKLATLSSTIINLHEFPMV*EWTCIW Trigger: CCAAATGCAAGTCCATTCCAAAACCATTGGAAATTC...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAAACCTAGCAATTTTATaGCTGTCTATGTTCACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TKWLCIQELGTDLVFLRLNLAIL*LSMFTG Trigger: TCCAGTGAACATAGACAGCAATAAAATTGCTAGGTT...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTATGTTCCTCCTAACTaGTCTCATAATAGCAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWEINKLATLSSTIINLHYVPPN*SHNSKW Trigger: CCACTTGCTATTATGAGACAAGTTAGGAGGAACATA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACACAATCCTTAGAAGTTaGTGGCTCCTTTCTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SWEINKLATLSSTIINLHTILRS*WLLSFH Trigger: ATGGAAAGAAAGGAGCCACAAACTTCTAAGGATTGT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR TCA 72 bp | ATCAGACTTTTCACACATGCTTCTTTCATGGTCAACTaGCAAGTGTCATGCTGTCGGTATTTCAGCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: IRLFTHASFMVN*QVSCCRYFSIL Trigger: TAAGATGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTGTGAAAAGTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR GCA 72 bp | GACCAAGTAAGTCTGCTCTGGAATTCACAGTTTGTCTaGATAAACTGTAACATGTCCTACCATAATCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DQVSLLWNSQFV*INCNMSYHNPK Trigger: CTTTGGATTATGGTAGGACATGTTACAGTTTATGCAGACAAACTGTGAATTCCAGAGCAGACTTACTTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CCA 72 bp | TTAGAATTTCCAATGGTTTTGGAATGGACTTGCATTTaGCATACATTCAGTGTGCTACTGGCAAAGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LEFPMVLEWTCI*HTFSVLLAKHS Trigger: ACTGTGCTTTGCCAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CCA 72 bp | GTATATGTTCCTCCTAACTTGTCTCATAATAGCAAGTaGAGTTGTCCATCTCTAAGGGAGACAAAAACTACA | + |
|
Preference number: 3 (lower is better) Translates to: VYVPPNLSHNSK*SCPSLRETKTT Trigger: TGTAGTTTTTGTCTCCCTTAGAGATGGACAACTCCACTTGCTATTATGAGACAAGTTAGGAGGAACATATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CCA 72 bp | AATAAAGCATCAGACTTTTCACACATGCTTCTTTCATaGTCAACTGACAAGTGTCATGCTGTCGGTATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NKASDFSHMLLS*STDKCHAVGIS Trigger: TGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTGTGAAAAGTCTGATGCTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCAAGTTTCCTTTTCTTTaGGTGAGTGCTCAAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IILPLIVLPHKGHNMPNSKFPFL*VSAQSF Trigger: GAAACTTTGAGCACTCACCAAAAGAAAAGGAAACTT...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CCA 72 bp | CCTTTCTCTACAAATATACAGACACACACTGCAACATaGATTCATTCAAGGTCTAACAATGGTACAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PFSTNIQTHTAT*IHSRSNNGTTV Trigger: TACTGTTGTACCATTGTTAGACCTTGAATGAATCCATGTTGCAGTGTGTGTCTGTATATTTGTAGAGAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGGGTGGCTGTGTACAGTaGATGCTGGTTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWGGCVQ*MLVPWR Trigger: TCTCCAAGGAACCAGCATTCACTGTACACAGCCACC...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACATGGAAGATGGCTGCTaGGGTGGCTGTGAAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHMEDGC*GGCEGG Trigger: CCCGCCTTCACAGCCACCTCAGCAGCCATCTTCCAT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGCTAGGAGGTCCTTGTTaGTATAGGTGGGGTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWLGGPC*YRWGGV Trigger: TACTCCACCCCACCTATATCAACAAGGACCTCCTAG...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCACTCAGGCGTGGGAATTaGAGTGGTGCAGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMLLSWSTDKCHAVGISALRRGN*SGAADS Trigger: AGAGTCAGCTGCACCACTGCAATTCCCACGCCTGAG...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCAGTGACCCAGCTGGGGTaGTTGTACTTGATGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMLLSWSTDKCHAVGISAVTQLG*LYLMLW Trigger: CCACAGCATCAAGTACAACCACCCCAGCTGGGTCAC...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACCACTGGGCCTTGTGGTaGGGACTGCCATGGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHHWALW*GLPWSI Trigger: AATGCTCCATGGCAGTCCTCACCACAAGGCCCAGTG...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGTTCTGTAACATGCACTaGGATACCACACCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWFCNMH*DTTPSG Trigger: TCCAGAGGGTGTGGTATCCCAGTGCATGTTACAGAA...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAGCTGCCTGGGCGTCATaGATATCTACTGGCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKWLCIQELGTDLVFLRLAAWAS*ISTGAL Trigger: CAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGC...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGAACTGTAGTTGGATTTaGTATCACCCGAGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWNCSWI*YHPRRW Trigger: CCATCTCCTCGGGTGATACCAAATCCAACTACAGTT...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CAA 72 bp | CCTTACAAGCCTTTCACCCTTTCCAAGTCCATGGGTTaGCGCCTGTTTTCCCACCATTACGATTTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PYKPFTLSKSMG*RLFSHHYDFHS Trigger: ACTGTGAAAATCGTAATGGTGGGAAAACAGGCGCAAACCCATGGACTTGGAAAGGGTGAAAGGCTTGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGTATCAGCTGTTTGCCTaGTGTATGCTGAGGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWYQLFA*CMLRIN Trigger: ATTGATCCTCAGCATACAGCAGGCAAACAGCTGATA...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCACTTCTAAGCCGTCTCTaGATCAGGTCATGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: HMLLSWSTDKCHAVGISALLSRL*IRSCSI Trigger: TATGGAGCATGACCTGATGCAGAGACGGCTTAGAAG...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGTACCGAATGACTTCCTaGTTTCTGATAACTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWYRMTS*FLITRR Trigger: CCTCCTAGTTATCAGAAACCAGGAAGTCATTCGGTA...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTGTGGGGTGGAGTAGTTaGAGGACTGGGTGGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCVGWSS*RTGWHK Trigger: TTTATGCCACCCAGTCCTTCAACTACTCCACCCCAC...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAAGAGCCTGGTATCACTaGAATGGGCTGAATAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKWLCIQELGTDLVFLRLRAWYH*NGLNRF Trigger: GAACCTATTCAGCCCATTTCAGTGATACCAGGCTCT...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTATGTTCATCTGCAGCTaGTGCCTGGGCGTCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCMFICS*CLGVMD Trigger: ATCCATGACGCCCAGGCAGCAGCTGCAGATGAACAT...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTCGTGGCATCTCACACTaGTCACAGCGATTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCRGISH*SQRFSA Trigger: TGCACTGAATCGCTGTGAGCAGTGTGAGATGCCACG...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTATTTGCTGCTCTCCTaGGAAAGGGCTCGACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHYLLLS*ERARQQ Trigger: CTGTTGTCGAGCCCTTTCCCAGGAGAGCAGCAAATA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCGGGCTGAATAGGTTCTaGTGCTGCAGAGCGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSGLNRF*CCRAFF Trigger: GAAGAACGCTCTGCAGCACCAGAACCTATTCAGCCC...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CAA 72 bp | GGGCAGATGAACACAATCCCAAAGTTTCCTTTTCTTTaGGTGAGTGCTCAAAGTTTCACTCTCAACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQMNTIPKFPFL*VSAQSFTLNLV Trigger: CACCAGGTTGAGAGTGAAACTTTGAGCACTCACCAAAAGAAAAGGAAACTTTGGGATTGTGTTCATCTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGGAGATCCATAGAGATTaGTTGGAATTTGTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWEIHRD*LEFVEE Trigger: TTCTTCCACAAATTCCAAGCAATCTCTATGGATCTC...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTCTCACAGCGATTCAGTaGAGGGTGGTTGAGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCLTAIQ*RVVEKG Trigger: ACCTTTCTCAACCACCCTGCACTGAATCGCTGTGAG...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTCATTCCTGTTTGCATaGAAGATGGCTGCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHSFLFA*KMAAEV Trigger: CACCTCAGCAGCCATCTTCCATGCAAACAGGAATGA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGATGAACACAATCCCAAAGTTTCCTTTTCTTTTGGTGAGTGCTCAAAGAACTTGAAGGTGGTGTaGTGGCTGTGTACAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WADEHNPKVSFSFGECSKNLKVV*WLCTVN Trigger: ATTCACTGTACACAGCCACCACACCACCTTCAAGTT...CTTTGAGCACTCACCAAAAGAAAAGGAAACTTTGGGATTGTGTTCATCTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGTTTAAAAACTGTAGTTaGATTTGGTATCACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTKARAPLRTVGLLDCFWFKNCS*IWYHPR Trigger: CCTCGGGTGATACCAAATCCAACTACAGTTTTTAAA...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTCGATTCAGTGCAGGGTaGTTGAGAAAGGTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCRFSAG*LRKVQL Trigger: CAGCTGTACCTTTCTCAACCACCCTGCACTGAATCG...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CAA 72 bp | ACTACAATGAGCTATGCCTTTGGTTTCAATATGCTATaGAGTGCAGCTTCTTTTTCCAGGTCTGGCAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTMSYAFGFNML*SAASFSRSGSD Trigger: ATCGCTGCCAGACCTGGAAAAAGAAGCTGCACTCAATAGCATATTGAAACCAAAGGCATAGCTCATTGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTTCCTTGGAGATGGTTaGTTACTGATAGGTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHFLGDG*LLIGDG Trigger: TCCGTCACCTATCAGTAATCAACCATCTCCAAGGAA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGATGAACACAATCCCAAAGTTTCCTTTTCTTTTGGTGAGTGCTCAAAGGAACTAGAGCTCCTTTaGTACTTGTGGTTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WADEHNPKVSFSFGECSKELELL*YLWFPF Trigger: AAAGGGAAACCACAAGTATCAAAGGAGCTCTAGTTC...CTTTGAGCACTCACCAAAAGAAAAGGAAACTTTGGGATTGTGTTCATCTGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACGGTGGTGAAGGACCTTaGATAGCAGATGGATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHGGEGP*IADGFI Trigger: AATGAATCCATCTGCTATGCAAGGTCCTTCACCACC...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCAATAGGTTCTGGTGCTaGAGAGCGTTCTTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSNRFWC*RAFFLV Trigger: GACCAAGAAGAACGCTCTGCAGCACCAGAACCTATT...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTCTGAATAGGTTCTGGTaGTGCAGAGCGTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCLNRFW*CRAFFL Trigger: CAAGAAGAACGCTCTGCAGCACCAGAACCTATTCAG...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | CACATGCTTCTTTCATGGTCAACTGACAAGTGTCATGCTGTCGGTATTTCAGCAACTAAATGGAGGTTTTaGTTGACTAGAGATCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMLLSWSTDKCHAVGISATKWRF*LTRDPS Trigger: AGAGGGATCTCTAGTCAACCAAAACCTCCATTTAGT...TGCTGAAATACCGACAGCATGACACTTGTCAGTTGACCATGAAAGAAGCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CAA 72 bp | CTTAGAATTTCCAATGGTTTTGGAATGGACTTGCATTaGGCATACATTCAGTGTGCTACTGGCAAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LRISNGFGMDLH*AYIQCATGKAQ Trigger: CTGTGCTTTGCCAGTAGCACACTGAATGTATGCCAAATGCAAGTCCATTCCAAAACCATTGGAAATTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCAGATCATGGAGAACCTaGATATCAAGCTGTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSRSWRT*ISSCGL Trigger: CAGTCCACAGCTTGATATTCAGGTTCTCCATGATCT...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCTTGCCTGCTGTATGCTaGGGATCAATATGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSLPAVC*GSICPS Trigger: TGATGGACATATTGATCCTCAGCATACAGCAGGCAA...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCGCTGTCCCAGGTCTTTaGGAAGGTTCAACTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSAVPGL*EGSTVI Trigger: AATTACAGTTGAACCTTCTCAAAGACCTGGGACAGC...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAAAGTTTCCTCTAGATTaGAGGAGGTCAACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKWLCIQELGTDLVFLRLKFPLD*RRSTSF Trigger: GAAAGAAGTTGACCTCCTTCAATCTAGAGGAAACTT...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTGGATACCACACCCTCTaGAATTTCAGGAAAACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCGYHTL*NFRKTL Trigger: CAACGTTTTCCTGAAATTCCAGAGGGTGTGGTATCC...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR TCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTACTTCCTGATGAACTCTaGGATGTCTGTCTAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKWLCIQELGTDLVFLRLLPDEL*DVCLIK Trigger: TTTTATTAGACAGACATCTCAGAGTTCATCAGGAAG...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCCTCTGCATCAGGTCATaGTCCATACTGTTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSLCIRS*SILLTS Trigger: TGAAGTTAACAGTATGGAGCATGACCTGATGCAGAG...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTATCCATAGAGATTGCTTaGAATTTGTGGAAGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKWLCIQELGTDLVFLRLSIEIA*NLWKNL Trigger: CAGATTCTTCCACAAATTCCAAGCAATCTCTATGGA...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTCCAGAAGGAAGGTTTTaGGACACTGTAACAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCPEGRF*DTVTVI Trigger: AATTACTGTTACAGTGTCCCAAAACCTTCCTTCTGG...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR GCA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCAAGGTTTTCAGTTGTTaGTCGGCCTACAGTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IILPLIVLPHKGHNMPNSKVFSC*SAYSNF Trigger: AAAATTACTGTAGGCCGAGCAACAACTGAAAACCTT...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACAGGATTAACACTAAATaGAGGTTTTGGTTGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWEINKLATLSSTIINLHRINTK*RFWLTR Trigger: TCTAGTCAACCAAAACCTCCATTTAGTGTTAATCCT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| 3UTR CAA 72 bp | AATTTTCTCATTATACATCACAGCAAGTGGCCTGATTaGTTATCTTTTTCAGTGTATCCACACCTGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFLIIHHSKWPD*LSFSVYPHLHC Trigger: ACAATGCAGGTGTGGATACACTGAAAAAGATAACAAATCAGGCCACTTGCTGTGATGTATAATGAGAAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS TCA 90 bp | TGGTTTCCCTTTTCTCCCCCAGAGCCTGGTATCACTGAAATGGGCTaGATAGGTTCTGGTGCTGCAGAGCGTTCTTCTTGGTCCACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WFPFSPPEPGITEMG*IGSGAAERSSWSTK Trigger: TTTAGTGGACCAAGAAGAACGCTCTGCAGCACCAGAACCTATTCAGCCCATTTCAGTGATACCAGGCTCTGGGGGAGAAAAGGGAAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS TCA 90 bp | GGTGTGGTGGCTGTGTACAGTGAATGCTGGTTCCTTGGAGATGGTTaGTTACTGATAGGTGACGGACTTCTAGTTATTGCTGTCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVVAVYSECWFLGDG*LLIGDGLLVIAVPG Trigger: ACCTGGGACAGCAATAACTAGAAGTCCGTCACCTATCAGTAATCAACCATCTCCAAGGAACCAGCATTCACTGTACACAGCCACCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGGGGCTTTTCTCTCAATaGCACAGGAGTCTGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YTKARAPLRTVGLLDCFWGLFSQ*HRSLRS Trigger: ACTCCTCAGACTCCTGTGCAATTGAGAGAAAAGCCC...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGTTCAGTGCAGGGTGGTaGAGAAAGGTACAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YTKARAPLRTVGLLDCFWFSAGW*RKVQLS Trigger: TGACAGCTGTACCTTTCTCAACCACCCTGCACTGAA...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS CCA 90 bp | TTGCAGATACTTAAATGTTCATCTGCAGCTGCTGCCTGGGCGTCATaGATATCTACTGGCGCTTTGGAAGTCACACTAATTCTTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQILKCSSAAAAWAS*ISTGALEVTLILRA Trigger: AGCCCGAAGAATTAGTGTGACTTCCAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGCAGCTGCAGATGAACATTTAAGTATCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGGAATCTGTAAAGCTCTaGGCACAGTCTGTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTKARAPLRTVGLLDCFWESVKL*AQSVQK Trigger: CTTCTGGACAGACTGTGCCAAGAGCTTTACAGATTC...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | ACAAAGTGGTTGTGTATACAGGAGTTGGGGACAGACCTAGTATTCCTAAGGTTAACCCAGCTGGGGTGGTaGTACTTGATGCTGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKWLCIQELGTDLVFLRLTQLGW*YLMLWR Trigger: TCTCCACAGCATCAAGTACAACCACCCCAGCTGGGT...TAACCTTAGGAATACTAGGTCTGTCCCCAACTCCTGTATACACAACCACTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS CCA 90 bp | GCACTCTGTTTGCAGATACTTAAATGTTCATCTGCAGCTGCTGCCTaGGCGTCATGGATATCTACTGGCGCTTTGGAAGTCACACTAATT | + |
|
Preference number: 5 (lower is better) Translates to: ALCLQILKCSSAAAA*ASWISTGALEVTLI Trigger: AATTAGTGTGACTTCCAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGCAGCTGCAGATGAACATTTAAGTATCTGCAAACAGAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | TACACAAAGGCAAGGGCACCTTTAAGAACAGTAGGACTGCTAGACTGCTTCTGGTTCTTCATGGAACCTTaGGGTAAGCTAGATGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTKARAPLRTVGLLDCFWFFMEP*GKLDAV Trigger: CACAGCATCTAGCTTACCCAAAGGTTCCATGAAGAA...CCAGAAGCAGTCTAGCAGTCCTACTGTTCTTAAAGGTGCCCTTGCCTTTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | TGGGCAGATGAACACAATCCCAAAGTTTCCTTTTCTTTTGGTGAGTGCTCAAAGCTGGGGTGGTTGTACTaGATGCTGTGGAGAGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WADEHNPKVSFSFGECSKLGWLY*MLWRAK Trigger: TTTAGCTCTCCACAGCATCAAGTACAACCACCCCAG...CTTTGAGCACTCACCAAAAGAAAAGGAAACTTTGGGATTGTGTTCATCTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | ATAATACTACCTCTGATTGTACTTCCTCACAAAGGGCACAATATGCCTAATTCCCTCTTGAAGGGGAACTaGAAGGTGGTGTGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IILPLIVLPHKGHNMPNSLLKGN*KVVWWL Trigger: CAGCCACCACACCACCTTCAAGTTCCCCTTCAAGAG...GGAATTAGGCATATTGTGCCCTTTGTGAGGAAGTACAATCAGAGGTAGTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTCGTGCTTCTCAATCTaGTCATTTCCTCAGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWEINKLATLSSTIINLHSCFSI*SFPQAW Trigger: CCACGCCTGAGGAAATGACAAGATTGAGAAGCACGA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS TCA 90 bp | GTATACGTAATATACACAGGATTAACACTAAATGGAGGTTTTGGTTaGCTAGAGATCCCTCTTGAAGGGGAACTTGAAGGTGGTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VYVIYTGLTLNGGFG*LEIPLEGELEGGVV Trigger: CACCACACCACCTTCAAGTTCCCCTTCAAGAGGGATCTCTAGTCAACCAAAACCTCCATTTAGTGTTAATCCTGTGTATATTACGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTTGGATTCATTCCTGTTaGCATGGAAGATGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCWIHSC*HGRWLL Trigger: CAGCAGCCATCTTCCATGCAAACAGGAATGAATCCA...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACTGCTGTCCCAGGTCTTaGAGAAGGTTCAACTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SWEINKLATLSSTIINLHCCPRS*RRFNCN Trigger: ATTACAGTTGAACCTTCTCAAAGACCTGGGACAGCA...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS TCA 90 bp | TTACTGATAGGTGACGGACTTCTAGTTATTGCTGTCCCAGGTCTTTaGGAAGGTTCAACTGTAATTTCTATCTTCTTCATGGAACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLIGDGLLVIAVPGL*EGSTVISIFFMEPL Trigger: CAAAGGTTCCATGAAGAAGATAGAAATTACAGTTGAACCTTCTCAAAGACCTGGGACAGCAATAACTAGAAGTCCGTCACCTATCAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACAATTTCAGGAAAACGTaGTCGAAGATCATGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SWEINKLATLSSTIINLHNFRKT*SKIMEN Trigger: GTTCTCCATGATCTTCGACAACGTTTTCCTGAAATT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS-3UTR CAA 90 bp | AGCAGTAACTGTAACAATTTGGATTCCATAGAAGAGCCCTTAACATCTCTGTGTGTCCGAGCACTCTGTTaGCAGATACTTAAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSNCNNLDSIEEPLTSLCVRALC*QILKCS Trigger: TGAACATTTAAGTATCTGCAAACAGAGTGCTCGGAC...ACACAGAGATGTTAAGGGCTCTTCTATGGAATCCAAATTGTTACAGTTACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACCAACAGGCTTCTAGATaGTTGTTATTCTGTAACATG | + |
|
Preference number: 5 (lower is better) Translates to: SWEINKLATLSSTIINLHQQASR*LLFCNM Trigger: CATGTTACAGAATAACAACAATCTAGAAGCCTGTTG...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACATCCATAGAGATTGCTaGGAATTTGTGGAAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SWEINKLATLSSTIINLHIHRDC*EFVEES Trigger: AGATTCTTCCACAAATTCCAAGCAATCTCTATGGAT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAAATAAACAAATTAGCAACACTTTCCTCCACCATCATTAACCTGCACAAAGTTTCCTCTAGATaGAAGGAGGTCAACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWEINKLATLSSTIINLHKVSSR*KEVNFF Trigger: AAAGAAGTTGACCTCCTTCAATCTAGAGGAAACTTT...GTGCAGGTTAATGATGGTGGAGGAAAGTGTTGCTAATTTGTTTATTTCCCAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CAA 72 bp | ATGAGAGCTTGGGTGACCCAGCTGGGGTGGTTGTACTaGATGCTGTGGAGAGCTAAAGGGGGAAGGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: MRAWVTQLGWLY*MLWRAKGGRTL Trigger: CAGTGTCCTTCCCCCTTTAGCTCTCCACAGCATCAAGTACAACCACCCCAGCTGGGTCACCCAAGCTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CAA 90 bp | GGGTGGCATAAACACATGAGAGCTTGGGTGACCCAGCTGGGGTGGTaGTACTTGATGCTGTGGAGAGCTAAAGGGGGAAGGACACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GWHKHMRAWVTQLGW*YLMLWRAKGGRTLR Trigger: TCTCAGTGTCCTTCCCCCTTTAGCTCTCCACAGCATCAAGTACAACCACCCCAGCTGGGTCACCCAAGCTCTCATGTGTTTATGCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS TCA 72 bp | TCTCACACTGCTCACAGCGATTCAGTGCAGGGTGGTTaGGAAAGGTACAGCTGTCACAATTCCACGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHTAHSDSVQGG*ERYSCHNSTEP Trigger: GGGCTCCGTGGAATTGTGACAGCTGTACCTTTCTCAACCACCCTGCACTGAATCGCTGTGAGCAGTGTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CAA 72 bp | AAACACATGAGAGCTTGGGTGACCCAGCTGGGGTGGTaGTACTTGATGCTGTGGAGAGCTAAAGGGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KHMRAWVTQLGW*YLMLWRAKGGR Trigger: CCTTCCCCCTTTAGCTCTCCACAGCATCAAGTACAACCACCCCAGCTGGGTCACCCAAGCTCTCATGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CAA 90 bp | CATAAACACATGAGAGCTTGGGTGACCCAGCTGGGGTGGTTGTACTaGATGCTGTGGAGAGCTAAAGGGGGAAGGACACTGAGAAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HKHMRAWVTQLGWLY*MLWRAKGGRTLRRR Trigger: CCTCCTTCTCAGTGTCCTTCCCCCTTTAGCTCTCCACAGCATCAAGTACAACCACCCCAGCTGGGTCACCCAAGCTCTCATGTGTTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS TCA 72 bp | TTTTCTCCCCCAGAGCCTGGTATCACTGAAATGGGCTaGATAGGTTCTGGTGCTGCAGAGCGTTCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSPPEPGITEMG*IGSGAAERSSW Trigger: CCAAGAAGAACGCTCTGCAGCACCAGAACCTATTCAGCCCATTTCAGTGATACCAGGCTCTGGGGGAGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CCA 72 bp | AGATCCCTCTTGAAGGGGAACTTGAAGGTGGTGTGGTaGCTGTGTACAGTGAATGCTGGTTCCTTGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RSLLKGNLKVVW*LCTVNAGSLEM Trigger: CATCTCCAAGGAACCAGCATTCACTGTACACAGCCACCACACCACCTTCAAGTTCCCCTTCAAGAGGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CCA 72 bp | ATCTGCAGCTGCTGCCTGGGCGTCATGGATATCTACTaGCGCTTTGGAAGTCACACTAATTCTTCGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ICSCCLGVMDIY*RFGSHTNSSGF Trigger: AAAGCCCGAAGAATTAGTGTGACTTCCAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGCAGCTGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CAA 72 bp | GCTGCTGCCTGGGCGTCATGGATATCTACTGGCGCTTaGGAAGTCACACTAATTCTTCGGGCTTTTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AAAWASWISTGA*EVTLILRAFLS Trigger: TGAGAGAAAAGCCCGAAGAATTAGTGTGACTTCCAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS GCA 72 bp | AATCCTCATCTCGGGGTTGTGTCCGAGCACTCTGTTTaGAGATACTTAAATGTTCATCTGCAGCTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NPHLGVVSEHSV*RYLNVHLQLLP Trigger: AGGCAGCAGCTGCAGATGAACATTTAAGTATCTGCAAACAGAGTGCTCGGACACAACCCCGAGATGAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
||
| CDS CCA 72 bp | TTGCAGATACTTAAATGTTCATCTGCAGCTGCTGCCTaGGCGTCATGGATATCTACTGGCGCTTTGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LQILKCSSAAAA*ASWISTGALEV Trigger: GACTTCCAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGCAGCTGCAGATGAACATTTAAGTATCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS CCA 72 bp | CTTAAATGTTCATCTGCAGCTGCTGCCTGGGCGTCATaGATATCTACTGGCGCTTTGGAAGTCACACTAATT | + |
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Preference number: 6 (lower is better) Translates to: LKCSSAAAAWAS*ISTGALEVTLI Trigger: AATTAGTGTGACTTCCAAAGCGCCAGTAGATATCCATGACGCCCAGGCAGCAGCTGCAGATGAACATTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS CAA 72 bp | CATTTATCTGGAGTTGTCTGTTCGTGCTTCTCAATCTaGTCATTTCCTCAGGCGTGGGAATTGCAGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HLSGVVCSCFSI*SFPQAWELQWC Trigger: GCACCACTGCAATTCCCACGCCTGAGGAAATGACAAGATTGAGAAGCACGAACAGACAACTCCAGATAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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| CDS CAA 72 bp | CTGGGATACCACACCCTCTGGAATTTCAGGAAAACGTaGTCGAAGATCATGGAGAACCTGAATATCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGYHTLWNFRKT*SKIMENLNIKL Trigger: CAGCTTGATATTCAGGTTCTCCATGATCTTCGACAACGTTTTCCTGAAATTCCAGAGGGTGTGGTATCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048250.10 ENSMUST00000137438.2 ENSMUST00000146063.2 |
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| CDS TCA 72 bp | ATATACACAGGATTAACACTAAATGGAGGTTTTGGTTaGCTAGAGATCCCTCTTGAAGGGGAACTTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: IYTGLTLNGGFG*LEIPLEGELEG Trigger: ACCTTCAAGTTCCCCTTCAAGAGGGATCTCTAGTCAACCAAAACCTCCATTTAGTGTTAATCCTGTGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048250.10 |
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