Pregenerated sensors for TAB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015755Ensembl transcript IDs: ENSMUST00000130322.2, ENSMUST00000146444.8, ENSMUST00000147938.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCAGTGGTGACAAGAGGGGAGGAGTCCTGGGAACACCTAGGCACTaGCACGTGACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCT | + |
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Preference number: 1 (lower is better) Translates to: ISGDKRGGVLGTPRH*HVTLDMVRQQAARS Trigger: AGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTCACGTGTCAGTGCCTAGGTGTTCCCAGGACTCCTCCCCTCTTGTCACCACTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 90 bp | CAGCCACACTTCTTCCCGGGAAGAAGAGGCTGCGGGAACGGCTGCTaGGGCTGCTTCTTAAAACTGCATTTTCCCAACAAGAGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: QPHFFPGRRGCGNGC*GCFLKLHFPNKSLP Trigger: TGGGAGGCTCTTGTTGGGAAAATGCAGTTTTAAGAAGCAGCCTCAGCAGCCGTTCCCGCAGCCTCTTCTTCCCGGGAAGAAGTGTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 90 bp | ACCTTCAACTGGACTAACTCCTGTGGCGGTGAAACACTTTCCCGATaGCAGGCGACCTTCTTGAACTTTAGATGTGGTTTCAGAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: TFNWTNSCGGETLSR*QATFLNFRCGFRGR Trigger: CCTTCCTCTGAAACCACATCTAAAGTTCAAGAAGGTCGCCTGTCATCGGGAAAGTGTTTCACCGCCACAGGAGTTAGTCCAGTTGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 90 bp | GACGTGAGACATCTGTACAGTAGGAGAGGCTTGGGGAGCGCACTGTaGATGTACAGACAGACACAGCTTTCCTTTTATCTCACACCTAAA | + |
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Preference number: 1 (lower is better) Translates to: DVRHLYSRRGLGSAL*MYRQTQLSFYLTPK Trigger: TTTAGGTGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGCCTCTCCTACTGTACAGATGTCTCACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 90 bp | AATACTTTCTGCTTTAAGCTGCTGGAGAAGACAAAACGACATGTTTaGTCACCCACTGCTCAAGTCAGTGTACAGCGTGACCTCGACCGT | + |
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Preference number: 1 (lower is better) Translates to: NTFCFKLLEKTKRHV*SPTAQVSVQRDLDR Trigger: ACGGTCGAGGTCACGCTGTACACTGACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTCTTCTCCAGCAGCTTAAAGCAGAAAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 90 bp | TCCCAACAAGAGCCTCCCATGGAGTTCTATGGGATACCACACAGATaGGGCAAGATGGCAGTGGGTTTAAATACTTTCTGCTTTAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SQQEPPMEFYGIPHR*GKMAVGLNTFCFKL Trigger: CAGCTTAAAGCAGAAAGTATTTAAACCCACTGCCATCTTGCCCCATCTGTGTGGTATCCCATAGAACTCCATGGGAGGCTCTTGTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 90 bp | AAGTACCCCAGATTTGTGGCGTTTCCCACATCTACTGGCACTATGTaGCAGCAGAGTTCTCAGTCAAACCTTGTTCCTTCTCTTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: KYPRFVAFPTSTGTM*QQSSQSNLVPSLCV Trigger: TACACAAAGAGAAGGAACAAGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCACAAATCTGGGGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 90 bp | ATGTACAGACAGACACAGCTTTCCTTTTATCTCACACCTAAATGCTaGCTTCACAGAGATGTCCTCAGAAGACAGAGGACAGGGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: MYRQTQLSFYLTPKC*LHRDVLRRQRTGPK Trigger: TTTTGGCCCTGTCCTCTGTCTTCTGAGGACATCTCTGTGAAGCCAGCATTTAGGTGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 90 bp | AGTTATGTTGTGCACAGTTTCATTTCATTAATGCTTTCTACCTTATaGCATTGCTTTTCTCAGGTAAGGCTTAAAAGGAGCATGATCGTG | + |
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Preference number: 1 (lower is better) Translates to: SYVVHSFISLMLSTL*HCFSQVRLKRSMIV Trigger: CACGATCATGCTCCTTTTAAGCCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACTGTGCACAACATAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTGACACGTGACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGGTATCATTAGCTCTGTaGGCTGACACTCAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: ALTRDTGHGQAAGSPVSQVSLAL*ADTQHS Trigger: GCTGTGTTGAGTGTCAGCCCACAGAGCTAATGATAC...CTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTCACGTGTCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCACACGTCAGGATCAGTGGTaGCAAGAGGGGAGGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LGSALWMYRQTQLSFYLTRQDQW*QEGRSP Trigger: AGGACTCCTCCCCTCTTGTCACCACTGATCCTGACG...TGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTAGGCTGCAGTGTTTCTTaGAGTGACTCACATGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLSILTVQSPEGQALTFLGCSVS*SDSHAA Trigger: TGCTGCATGTGAGTCACTGCAAGAAACACTGCAGCC...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CCA 90 bp | CGTATCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTTCTACTGGCACTATGTaGCAGCAGAGTTCTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RISFHTHSAKPGRPGSDLSTGTM*QQSSQS Trigger: TGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGA...AAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGCTGGAGAAGACAAAACGACATGTTTGGTCACCCACTGCTCAAGTCAGTCCCATGACATTAGATTaGGGTATCATTAGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KLLEKTKRHVWSPTAQVSPMTLD*GIISSV Trigger: CACAGAGCTAATGATACCTCAATCTAATGTCATGGG...ACTGACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTCTTCTCCAGCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGCTTTTGGGGAGCGCACTGTaGATGTACAGACAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: FISLMLSTLWHCFSQVRLLGSAL*MYRQTQ Trigger: CTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAA...AAGCCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATACTCACACCTAAATGCTaGCTTCACAGAGATGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FLYFSTSLSPIPSTDNFILTPKC*LHRDVL Trigger: GAGGACATCTCTGTGAAGCCAGCATTTAGGTGTGAG...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCCTTTATAAATACACATaGCTGTGCCAACAGTCCGAC | + |
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Preference number: 2 (lower is better) Translates to: VTKIVYPAKSQNHQLKISLYKYT*LCQQSD Trigger: GTCGGACTGTTGGCACAGTCATGTGTATTTATAAAG...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCTATCTCACACCTAAATaGTGGCTTCACAGAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: VTKIVYPAKSQNHQLKISYLTPK*WLHRDV Trigger: GACATCTCTGTGAAGCCAGCATTTAGGTGTGAGATA...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCTCTACCTTATGGCATTaGTTTTCTCAGGTAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: VTKIVYPAKSQNHQLKISSTLWH*FSQVRL Trigger: AAGCCTTACCTGAGAAAAGCAATGCCATAAGGTAGA...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 72 bp | GACAAGAGGGGAGGAGTCCTGGGAACACCTAGGCACTaGCACGTGACACTGGACATGGTCAGGCAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: DKRGGVLGTPRH*HVTLDMVRQQA Trigger: TGCCTGCTGCCTGACCATGTCCAGTGTCACGTGTCAGTGCCTAGGTGTTCCCAGGACTCCTCCCCTCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CAA 90 bp | CGTATCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTTACAGTAGGAGAGGCTaGGGGAGCGCACTGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: RISFHTHSAKPGRPGSDLYSRRG*GSALWM Trigger: CATCCACAGTGCGCTCCCCAAGCCTCTCCTACTGTA...AAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGATACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 72 bp | ACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTaGCTCACATGCAGCACCTGCATGTCTTCTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: TSTVRWLQCFLQ*LTCSTCMSSQS Trigger: GCTCTGAGAAGACATGCAGGTGCTGCATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 72 bp | GCGGTGAAACACTTTCCCGATGACAGGCGACCTTCTTaGACTTTAGATGTGGTTTCAGAGGAAGGCGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: AVKHFPDDRRPS*TLDVVSEEGGA Trigger: GGCCCCGCCTTCCTCTGAAACCACATCTAAAGTTCAAGAAGGTCGCCTGTCATCGGGAAAGTGTTTCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 72 bp | TTCTTCCCGGGAAGAAGAGGCTGCGGGAACGGCTGCTaGGGCTGCTTCTTAAAACTGCATTTTCCCAACAAG | + |
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Preference number: 3 (lower is better) Translates to: FFPGRRGCGNGC*GCFLKLHFPNK Trigger: CTTGTTGGGAAAATGCAGTTTTAAGAAGCAGCCTCAGCAGCCGTTCCCGCAGCCTCTTCTTCCCGGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | CAACACAGCACACCACTGTCTCGTCACACCTTCAACTaGACTAACTCCTGTGGCGGTGAAACACTTTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: QHSTPLSRHTFN*TNSCGGETLSR Trigger: TCGGGAAAGTGTTTCACCGCCACAGGAGTTAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | AAGACAGAGGACAGGGCCAAAAGTACCCCAGATTTGTaGCGTTTCCCACATCTACTGGCACTATGTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: KTEDRAKSTPDL*RFPHLLALCGS Trigger: GCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCACAAATCTGGGGTACTTTTGGCCCTGTCCTCTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | TGCATTTTCCCAACAAGAGCCTCCCATGGAGTTCTATaGGATACCACACAGATGGGGCAAGATGGCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: CIFPTRASHGVL*DTTQMGQDGSG Trigger: CCCACTGCCATCTTGCCCCATCTGTGTGGTATCCCATAGAACTCCATGGGAGGCTCTTGTTGGGAAAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTATGTCTTCTCAGAGCATaGGCACCAAGGGACAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SLSILTVQSPEGQALTFLCLLRA*APRDKG Trigger: TCCTTTGTCCCTTGGTGCCAATGCTCTGAGAAGACA...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | CATCTGTACAGTAGGAGAGGCTTGGGGAGCGCACTGTaGATGTACAGACAGACACAGCTTTCCTTTTATCTC | + |
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Preference number: 3 (lower is better) Translates to: HLYSRRGLGSAL*MYRQTQLSFYL Trigger: GAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGCCTCTCCTACTGTACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | GAGCCTCCCATGGAGTTCTATGGGATACCACACAGATaGGGCAAGATGGCAGTGGGTTTAAATACTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: EPPMEFYGIPHR*GKMAVGLNTFC Trigger: GCAGAAAGTATTTAAACCCACTGCCATCTTGCCCCATCTGTGTGGTATCCCATAGAACTCCATGGGAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR TCA 72 bp | TGGACTAACTCCTGTGGCGGTGAAACACTTTCCCGATaGCAGGCGACCTTCTTGAACTTTAGATGTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: WTNSCGGETLSR*QATFLNFRCGF Trigger: GAAACCACATCTAAAGTTCAAGAAGGTCGCCTGTCATCGGGAAAGTGTTTCACCGCCACAGGAGTTAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | AAAGTACCCCAGATTTGTGGCGTTTCCCACATCTACTaGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCT | + |
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Preference number: 3 (lower is better) Translates to: KVPQICGVSHIY*HYVAAEFSVKP Trigger: AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCACAAATCTGGGGTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | TGCTTTAAGCTGCTGGAGAAGACAAAACGACATGTTTaGTCACCCACTGCTCAAGTCAGTGTACAGCGTGAC | + |
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Preference number: 3 (lower is better) Translates to: CFKLLEKTKRHV*SPTAQVSVQRD Trigger: GTCACGCTGTACACTGACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTCTTCTCCAGCAGCTTAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTAGGAGAGGGAGTTATGTaGTGCACAGTTTCATTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SLSILTVQSPEGQALTFLGEGVM*CTVSFH Trigger: ATGAAATGAAACTGTGCACAACATAACTCCCTCTCC...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | CAGACACAGCTTTCCTTTTATCTCACACCTAAATGCTaGCTTCACAGAGATGTCCTCAGAAGACAGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: QTQLSFYLTPKC*LHRDVLRRQRT Trigger: TGTCCTCTGTCTTCTGAGGACATCTCTGTGAAGCCAGCATTTAGGTGTGAGATAAAAGGAAAGCTGTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR GCA 72 bp | AGATGGGGCAAGATGGCAGTGGGTTTAAATACTTTCTaGTTTAAGCTGCTGGAGAAGACAAAACGACATGTT | + |
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Preference number: 3 (lower is better) Translates to: RWGKMAVGLNTF*FKLLEKTKRHV Trigger: AACATGTCGTTTTGTCTTCTCCAGCAGCTTAAAGCAGAAAGTATTTAAACCCACTGCCATCTTGCCCCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATAGACAAAACGACATGTTaGGTCACCCACTGCTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIDKTTC*VTHCSS Trigger: ACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTC...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| 3UTR CCA 72 bp | GTGCACAGTTTCATTTCATTAATGCTTTCTACCTTATaGCATTGCTTTTCTCAGGTAAGGCTTAAAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: VHSFISLMLSTL*HCFSQVRLKRS Trigger: GCTCCTTTTAAGCCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACTGTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | GCACTGACACGTGACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGCTGAGAGCTCCCAGATaGGTGAATGGTTGGCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ALTRDTGHGQAAGSPVSQLRAPR*VNGWRL Trigger: CAACCGCCAACCATTCACTCATCTGGGAGCTCTCAG...CTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTCACGTGTCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR CCA 90 bp | CTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGCAGCACCTGGCCCAGACATGTTCCTaGAGGCTGCAGATGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LDRPMAAVFLAVTHMQHLAQTCS*RLQMAQ Trigger: CTGGGCCATCTGCAGCCTCCAGGAACATGTCTGGGC...CAGGTGCTGCATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | GACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGGCCTTTCAGGTGCCTTTGCTGCCTAGGTaGAATCCAAGATGCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: DTGHGQAAGSPVSQAFQVPLLPR*NPRCGV Trigger: AACACCGCATCTTGGATTTCACCTAGGCAGCAAAGG...CACCTGAAAGGCCTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | GCACTGACACGTGACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGTTAAGGTCTGGCTGTTaGCCAATGAGGAAGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ALTRDTGHGQAAGSPVSQLRSGC*PMRKCW Trigger: CCAGCACTTCCTCATTGGTCAACAGCCAGACCTTAA...CTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTCACGTGTCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | CTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGCAGCACCTGTTGGACTGCCCACCGTaGAGCTGTCCATCACTAACG | + |
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Preference number: 4 (lower is better) Translates to: LDRPMAAVFLAVTHMQHLLDCPP*SCPSLT Trigger: CGTTAGTGATGGACAGCTTCACGGTGGGCAGTCCAA...CAGGTGCTGCATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR GCA 90 bp | CTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGCAGCACCTGATCCTGGCCTTCTGGTaGACCAGCAGAGCTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LDRPMAAVFLAVTHMQHLILAFW*TSRACV Trigger: CACACAAGCTCTGCTGGTGCACCAGAAGGCCAGGAT...CAGGTGCTGCATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | GACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGGCCTTTCAGGTGGTGGTAAACATTCTGTaGCTGCAAGTCCAAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: DTGHGQAAGSPVSQAFQVVVNIL*LQVQVE Trigger: CTCAACTTGGACTTGCAGTCACAGAATGTTTACCAC...CACCTGAAAGGCCTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | CAGCGTGACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGTACCTTGTACTCTCCTaGGAGAGAACAGCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRDLDRPMAAVFLAVTHMYLVLS*ERTAQQ Trigger: CTGCTGCGCTGTTCTCTCTCAGGAGAGTACAAGGTA...CATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | CAGCGTGACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGATTCGGCTGCTGGGTTaGGGTATGTGGCAAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: QRDLDRPMAAVFLAVTHMIRLLG*GMWQRI Trigger: AATCCTTTGCCACATACCTCAACCCAGCAGCCGAAT...CATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGACCTTCCTCATCCTCTaGGTCTTGGGTCTTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWADTQHSTPLSRHTFNWTFLIL*VLGLWC Trigger: GCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGT...CCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGGCCTTTCAGGTGCTGAAATATAGACCTTaGGTTGACTACGGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: DTGHGQAAGSPVSQAFQVLKYRP*VDYGRS Trigger: TGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAG...CACCTGAAAGGCCTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACGAAGCCGTTCCATCCTaGCCTTCTGGTGCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VAFPTSTGTMWQQSSQSNEAVPS*PSGAPA Trigger: TGCTGGTGCACCAGAAGGCCAGGATGGAACGGCTTC...GTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGTGCGGTGGCATTGGCTaGAATATAGACCTTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWADTQHSTPLSRHTFNWCGGIG*NIDLGL Trigger: CAACCCAAGGTCTATATTTCAGCCAATGCCACCGCA...CCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGACTACCAATGAGGAAGTGCTaGCAGTTCGAGGTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLNTAHHCLVTPSTGLPMRKC*QFEVQK Trigger: CTTCTGGACCTCGAACTGCCAGCACTTCCTCATTGG...TAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| 3UTR CAA 72 bp | CAGAAGACAGAGGACAGGGCCAAAAGTACCCCAGATTaGTGGCGTTTCCCACATCTACTGGCACTATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKTEDRAKSTPD*WRFPHLLALCG Trigger: GCCACATAGTGCCAGTAGATGTGGGAAACGCCACAAATCTGGGGTACTTTTGGCCCTGTCCTCTGTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| 3UTR CAA 72 bp | AAAGCAGACGTGAGACATCTGTACAGTAGGAGAGGCTaGGGGAGCGCACTGTGGATGTACAGACAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KADVRHLYSRRG*GSALWMYRQTQ Trigger: CTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGCCTCTCCTACTGTACAGATGTCTCACGTCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTACTTTTGGGTGGATGGTaGTGGATAAAGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSILTVQSPEGQALTFLLLGGW*WIKAGP Trigger: GGGTCCTGCCTTTATCCATCACCATCCACCCAAAAG...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | GACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGGCCTTTCAGGTGAGGTCATGTAAAACCTaGAAATCAATTTGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTGHGQAAGSPVSQAFQVRSCKT*KSIWWL Trigger: AAGCCACCAAATTGATTTTCAGGTTTTACATGACCT...CACCTGAAAGGCCTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGACTATTGAGGAACTTGAGCTaGTGCTGTCTGTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLNTAHHCLVTPSTGLLRNLS*CCLWLL Trigger: CAAGAGCCACAGACAGCACCAGCTCAAGTTCCTCAA...TAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGACACGTGACACTGGACATGGTCAGGCAGCAGGCAGCCCGGTCTCTCAGCAGCTATGTAAACAGTaGGCTGATTTCTATTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALTRDTGHGQAAGSPVSQQLCKQ*ADFYLR Trigger: CCTTAAATAGAAATCAGCCCACTGTTTACATAGCTG...CTGAGAGACCGGGCTGCCTGCTGCCTGACCATGTCCAGTGTCACGTGTCAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGTGACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGGTGGGGGTTCAAGTTTaGTTTCTATCTGGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRDLDRPMAAVFLAVTHMVGVQV*FLSGSF Trigger: GAAAGAACCAGATAGAAATCAAACTTGAACCCCCAC...CATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | CGTATCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTTTGATGGTGGACCTTTaGTCTTTGGGTTTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RISFHTHSAKPGRPGSDLLMVDL*SLGFGG Trigger: GCCACCAAAACCCAAAGATCAAAGGTCCACCATCAA...AAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGATACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGTGACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGTGTGTGTTAAAGTCCTaGTTCCATTCACTCGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRDLDRPMAAVFLAVTHMCVLKS*FHSLDF Trigger: GAAGTCGAGTGAATGGAAGCAGGACTTTAACACACA...CATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCACTGGGAAATGGAATTTaGTCTCTTCAGGCGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWGAHCGCTDRHSFPFISLGNGI*SLQAPS Trigger: CGAAGGCGCCTGAAGAGATCAAATTCCATTTCCCAG...TGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGACTACAACTTCTCAACTGCTaGATTTCTTCGAGTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLTLNTAHHCLVTPSTGLQLLNC*ISSSDG Trigger: ACCGTCACTCGAAGAAATGCAGCAGTTGAGAAGTTG...TAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTAGAAACGTACAGGCAGTaGAATTCCACTGAGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSILTVQSPEGQALTFLETYRQ*NSTEHL Trigger: AAGGTGCTCAGTGGAATTGCACTGCCTGTACGTTTC...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACGATAGAATTTCCCTGTaGACTGTTCAGTACAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VAFPTSTGTMWQQSSQSNDRISL*TVQYRR Trigger: CCGCCTGTACTGAACAGTCCACAGGGAAATTCTATC...GTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | GTGGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACGGGTCTGTGAGATGCTaGATGTTCTCTGTTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VAFPTSTGTMWQQSSQSNGSVRC*MFSVST Trigger: TGTAGAAACAGAGAACATTCAGCATCTCACAGACCC...GTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | GGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTGGTTTGATGTCCCTTTaGTGCCTAGGTGAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVSHIYWHYVAAEFSVKPGLMSL*CLGEIQ Trigger: TTGGATTTCACCTAGGCAGCAAAGGGACATCAAACC...AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR CCA 90 bp | GGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTTTGATCTTTGGGTTTTaGTGGCACAGGGCCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVSHIYWHYVAAEFSVKPLIFGF*WHRAYK Trigger: TTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAA...AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCATGGCAAAGGATTGGATaGAGGATAAGTAGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWGAHCGCTDRHSFPFISWQRIG*RISSPR Trigger: CCTTGGACTACTTATCCTGCATCCAATCCTTTGCCA...TGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTATTGAGAGAAGTCATGTaGTTGCGTAGACCAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLSILTVQSPEGQALTFLLREVM*LRRPEI Trigger: AATTTCTGGTCTACGCAATCACATGACTTCTCTCAA...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCATGTGGTCCTCGGGCTTaGAAAAGATCAATTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AWGAHCGCTDRHSFPFISCGPRA*KRSISL Trigger: CAAAGAAATTGATCTTTTTCAAGCCCGAGGACCACA...TGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR GCA 90 bp | GGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTGGTACACCATGTATGTaGAAAGATGTAGGAGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: GVSHIYWHYVAAEFSVKPGTPCM*KDVGVL Trigger: TAGTACTCCTACATCTTTGCACATACATGGTGTACC...AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR GCA 90 bp | GTGGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACTTACAACTTCTCAACTaGTGCATTTCTTCGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAFPTSTGTMWQQSSQSNLQLLN*CISSSD Trigger: GTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAA...GTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGACTAAGAACTGTTTCTTTGTaGGGGTTCAAGTTTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLTLNTAHHCLVTPSTGLRTVSL*GFKFDF Trigger: GAAATCAAACTTGAACCCCCACAAAGAAACAGTTCT...TAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR CCA 90 bp | AAGCTGCTGGAGAAGACAAAACGACATGTTTGGTCACCCACTGCTCAAGTCAGTAACTTCAGGCACTTCTaGGAATTTTTGTCGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLEKTKRHVWSPTAQVSNFRHF*EFLSQV Trigger: GACCTGCGACAAAAATTCCCAGAAGTGCCTGAAGTT...ACTGACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTCTTCTCCAGCAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCACACATCTCATCAGTATTTaGAGGACTGGCAGCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGSALWMYRQTQLSFYLTHLISI*RTGSYV Trigger: TACATAGCTGCCAGTCCTCCAAATACTGATGAGATG...TGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS-3UTR TCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATAGAGCTCCCAGATGAGTaGATGGTTGGCGGTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIELPDE*MVGGCG Trigger: TCCACAACCGCCAACCATTCACTCATCTGGGAGCTC...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| 3UTR CAA 72 bp | CTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTaGTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LALCGSRVLSQT*FLLFVYVVFHQ Trigger: TTGGTGAAACACTACATACACAAAGAGAAGGAACAAGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGCTGGCTGTTGACCAATaGGGAAGTGCTGGCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFISLMLSTLWHCFSQVRLAVDQ*GSAGSS Trigger: CGAACTGCCAGCACTTCCTCATTGGTCAACAGCCAG...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAATTGTGTTGGGTTGAGTaGCCACCACTCGAGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLCVCSVSPKALTTQKLCWVE*PPLEET Trigger: CGTCTCCTCGAGTGGTGGTCACTCAACCCAACACAA...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCTCGGTTGATTCCGCATaGCTTGCTCATCTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTKIVYPAKSQNHQLKISSVDSA*LAHLLR Trigger: CCGCAGGAGATGAGCAAGGCATGCGGAATCAACCGA...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATACATGTTCCTGGAGGCTaGAGATGGCCCAGAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIHVPGG*RWPRVC Trigger: ACAAACTCTGGGCCATCTGCAGCCTCCAGGAACATG...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAATGTAAGTTCAAAGGTTaGGGAGACCACCCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPSLCVCSVSPKALTTQKCKFKG*GDHPRG Trigger: TCCCCGGGGGTGGTCTCCCCAACCTTTGAACTTACA...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAATCCATCCTGGCCTTCTaGTGCACCAGCAGAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSLCVCSVSPKALTTQKSILAF*CTSRAC Trigger: ACAAGCTCTGCTGGTGCACCAGAAGGCCAGGATGGA...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGGCAGTGCAATTCCACTaGGCACCTTCCTCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFISLMLSTLWHCFSQVRAVQFH*APSSSS Trigger: AGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGC...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATACCTGGAGGCTGCAGATaGCCCAGAGTTTGTAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIPGGCR*PRVCRY Trigger: ATATCTACAAACTCTGGGCCATCTGCAGCCTCCAGG...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAAGCAATCATCCTGTCTTGGACCTTTGATCTTTaGGTTTTGGTGGCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCSVSPKALTTQKAIILSWTFDL*VLVAQG Trigger: GCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCA...AGACAGGATGATTGCTTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATAGTCTTGGGTCTTTGGTaGTTTGATGGTGGACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIVLGLW*FDGGPL Trigger: CAAAGGTCCACCATCAAAGCACCAAAGACCCAAGAC...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAACTCCTGCGGTGGCATTaGCTGAAATATAGACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSLCVCSVSPKALTTQKLLRWH*LKYRPW Trigger: CCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAG...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATAGCTCATCTCCTGCGGTaGCATTGGCTGAAATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIAHLLR*HWLKYR Trigger: TCTATATTTCAGCCAATGCCACCGCAGGAGATGAGC...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTATATTTCAGCACTTCCCTTAGCCCCATTCCAAGCACTGATAATTTCATAATCTTTGGGTTTTGGTaGCACAGGGCCTACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FLYFSTSLSPIPSTDNFIIFGFW*HRAYKS Trigger: GGATTTGTAGGCCCTGTGCCACCAAAACCCAAAGAT...TATGAAATTATCAGTGCTTGGAATGGGGCTAAGGGAAGTGCTGAAATATAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAAAACCTGGGAGTCTGTTaGGAAAGGTTTGATGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSLCVCSVSPKALTTQKNLGVC*ERFDVP Trigger: AGGGACATCAAACCTTTCTCAACAGACTCCCAGGTT...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGTATTTTGTGTTGGGTTaGGTGACCACCACTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFISLMLSTLWHCFSQVRYFVLG*VTTTRG Trigger: TCCTCGAGTGGTGGTCACTCAACCCAACACAAAATA...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCGGGTCTTTGGTGCTTTaGTGGTGGACCTTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTKIVYPAKSQNHQLKISGSLVL*WWTFDL Trigger: AAGATCAAAGGTCCACCATCAAAGCACCAAAGACCC...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCTCATCCTCTGCGTCTTaGGTCTTTGGTGCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VTKIVYPAKSQNHQLKISSSSAS*VFGALM Trigger: CATCAAAGCACCAAAGACCCAAGACGCAGAGGATGA...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR TCA 90 bp | TTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGCTTTTCATGGGATTAAACTaGGACACCCAGCCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FISLMLSTLWHCFSQVRLFMGLN*DTQPEC Trigger: ACATTCTGGCTGGGTGTCTCAGTTTAATCCCATGAA...AAGCCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAAACGGTATCTGGGAAATaGAATTTGATCTCTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLCVCSVSPKALTTQKTVSGK*NLISSG Trigger: GCCTGAAGAGATCAAATTCCATTTCCCAGATACCGT...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGAGTTTGATTTCTATCTaGTTCTTTCGAGGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFISLMLSTLWHCFSQVRSLISI*FFRGPV Trigger: AACAGGACCTCGAAAGAACCAGATAGAAATCAAACT...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGTATTGTTCTGTAACATaGACCTGGATACAACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFISLMLSTLWHCFSQVRYCSVT*TWIQQL Trigger: AAGTTGTTGTATCCAGGTGCATGTTACAGAACAATA...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGCAGTCAATGTCAATCTaGAGTTGTCTATTACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFISLMLSTLWHCFSQVRQSMSI*SCLLQL Trigger: AAGTTGTAATAGACAACTCCAGATTGACATTGACTG...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGTGACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGCCACTCGAGGAGACGTaGCAGAGTTACCACCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: QRDLDRPMAAVFLAVTHMPLEET*QSYHLT Trigger: TGTTAGGTGGTAACTCTGCAACGTCTCCTCGAGTGG...CATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS TCA 90 bp | GAGGCTGCAGATGGCCCAGAGTTTGTAGATATGAAGAGTGTCGGTTaGTTCCGCATGCCTTGCTCATCTCCTGCGGTGGCATTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EAADGPEFVDMKSVG*FRMPCSSPAVALAE Trigger: TTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCATGCGGAATCAACCGACACTCTTCATATCTACAAACTCTGGGCCATCTGCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS GCA 90 bp | GTTCACAGCGGATTAAGGCCGGGTGATTCAGAAACGTACAGGCAGTaGAATTCCACTGAGCACCTTCCTCATCCTCTGCGTCTTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VHSGLRPGDSETYRQ*NSTEHLPHPLRLGS Trigger: AGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCCTGTACGTTTCTGAATCACCCGGCCTTAATCCGCTGTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGGATGCGGTGTTGAGTTaGAAGCACCAGATGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWADTQHSTPLSRHTFNWDAVLS*KHQMYW Trigger: CCAGTACATCTGGTGCTTCAAACTCAACACCGCATC...CCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTCCAGCCAGAATGTTGTaGTGTCTGCCGAGCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: GVSHIYWHYVAAEFSVKPPARML*CLPSCT Trigger: GGTACAGCTCGGCAGACACAACAACATTCTGGCTGG...AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | CGTATCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTGTGAATGGTTGGCGGTaGTGGAGTAGTTGGCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RISFHTHSAKPGRPGSDLVNGWR*WSSWRT Trigger: AGTTCGCCAACTACTCCACAACCGCCAACCATTCAC...AAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGATACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGTATGAAGAGTGTCGGTaGATTCCGCATGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWADTQHSTPLSRHTFNWYEECR*IPHALL Trigger: GAGCAAGGCATGCGGAATCAACCGACACTCTTCATA...CCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGTGACCTCGACCGTCCGATGGCTGCAGTGTTTCTTGCAGTGACTCACATGATATTTTGTGTTGGGTaGAGTGACCACCACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRDLDRPMAAVFLAVTHMIFCVG*SDHHSR Trigger: CCTCGAGTGGTGGTCACTCAACCCAACACAAAATAT...CATGTGAGTCACTGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS TCA 90 bp | GTAGACATGAGAGGTCTGATGGCCCTGCTGATTCGGCTGCTGGGTTaGGGTATGTGGCAAAGGATTGGATGCAGGATAAGTAGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDMRGLMALLIRLLG*GMWQRIGCRISSPR Trigger: CCTTGGACTACTTATCCTGCATCCAATCCTTTGCCACATACCTCAACCCAGCAGCCGAATCAGCAGGGCCATCAGACCTCTCATGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTCTTAGATTCGGCTGCTGGGTaGAGGTATGTGGCAAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSILTVQSPEGQALTFLDSAAG*RYVAKD Trigger: ATCCTTTGCCACATACCTCAACCCAGCAGCCGAATC...TAAGAAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS TCA 90 bp | CGGTTGATTCCGCATGCCTTGCTCATCTCCTGCGGTGGCATTGGCTaGAATATAGACCTTGGGTTGACTACGGGAGATCATCTCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLIPHALLISCGGIG*NIDLGLTTGDHLIS Trigger: ACTGATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCATGCGGAATCAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS GCA 90 bp | ATTCCACTGAGCACCTTCCTCATCCTCTGCGTCTTGGGTCTTTGGTaGTTTGATGGTGGACCTTTGATCTTTGGGTTTTGGTGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPLSTFLILCVLGLW*FDGGPLIFGFWWHR Trigger: CCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS CCA 90 bp | GTGTCGGTTGATTCCGCATGCCTTGCTCATCTCCTGCGGTGGCATTaGCTGAAATATAGACCTTGGGTTGACTACGGGAGATCATCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSVDSACLAHLLRWH*LKYRPWVDYGRSSH Trigger: ATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCATGCGGAATCAACCGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS CCA 90 bp | GCAATTCCACTGAGCACCTTCCTCATCCTCTGCGTCTTGGGTCTTTaGTGCTTTGATGGTGGACCTTTGATCTTTGGGTTTTGGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AIPLSTFLILCVLGL*CFDGGPLIFGFWWH Trigger: GTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCAAAAGCCTTGAGGAACTaGAGCTGGTGCTGTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWGAHCGCTDRHSFPFISKALRN*SWCCLW Trigger: CCACAGACAGCACCAGCTCAAGTTCCTCAAGGCTTT...TGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS GCA 90 bp | TTTCCCTGTGGACTGTTCAGTACAGGCGGAGGTACACCATGTATGTaGAAAGATGTAGGAGTACTACGGCCAGTCTGTATGTTTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPCGLFSTGGGTPCM*KDVGVLRPVCMFGA Trigger: AGCCCCAAACATACAGACTGGCCGTAGTACTCCTACATCTTTGCACATACATGGTGTACCTCCGCCTGTACTGAACAGTCCACAGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS CCA 90 bp | TGCCTTGCTCATCTCCTGCGGTGGCATTGGCTGAAATATAGACCTTaGGTTGACTACGGGAGATCATCTCATCAGTATTTGGAGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLAHLLRWHWLKYRP*VDYGRSSHQYLEDW Trigger: CCAGTCCTCCAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS-3UTR CAA 90 bp | CGTATCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTAATATAGACCTTGGGTaGACTACGGGAGATCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RISFHTHSAKPGRPGSDLNIDLG*TTGDHL Trigger: GAGATGATCTCCCGTAGTCAACCCAAGGTCTATATT...AAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGATACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTTCTGGGAAATGGAATTaGATCTCTTCAGGCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVSHIYWHYVAAEFSVKPSGKWN*ISSGAF Trigger: GAAGGCGCCTGAAGAGATCAAATTCCATTTCCCAGA...AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTGACACTCAACACAGCACACCACTGTCTCGTCACACCTTCAACTGGACTATTTGATGGTGGACCTTaGATCTTTGGGTTTTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLTLNTAHHCLVTPSTGLFDGGP*IFGFWW Trigger: CCACCAAAACCCAAAGATCAAAGGTCCACCATCAAA...TAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS GCA 90 bp | AAACGTACAGGCAGTGCAATTCCACTGAGCACCTTCCTCATCCTCTaGGTCTTGGGTCTTTGGTGCTTTGATGGTGGACCTTTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KRTGSAIPLSTFLIL*VLGLWCFDGGPLIF Trigger: AAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCCTGTACGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | CGTATCTCTTTCCATACTCACAGTGCAAAGCCCGGAAGGCCAGGCTCTGACCTTGCATCCAGGTTATTATaGTTCTGTAACATGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RISFHTHSAKPGRPGSDLASRLL*FCNMHL Trigger: CAGGTGCATGTTACAGAACAATAATAACCTGGATGC...AAGGTCAGAGCCTGGCCTTCCGGGCTTTGCACTGTGAGTATGGAAAGAGATACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS TCA 90 bp | TCATCCTCTGCGTCTTGGGTCTTTGGTGCTTTGATGGTGGACCTTTaGTCTTTGGGTTTTGGTGGCACAGGGCCTACAAATCCAATATTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSASWVFGALMVDL*SLGFGGTGPTNPIL Trigger: CAATATTGGATTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACCTAAAAACATTAAAGCCTaGAGGAACTTGAGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVSHIYWHYVAAEFSVKPKNIKA*RNLSWC Trigger: GCACCAGCTCAAGTTCCTCAAGGCTTTAATGTTTTT...AGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTGGAGAAGACAAAACGACATGTTTGGTCACCCACTGCTCAAGTCAGTATCCAAGATGCGGTGTaGAGTTTGAAGCACCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KLLEKTKRHVWSPTAQVSIQDAV*SLKHQM Trigger: CATCTGGTGCTTCAAACTCAACACCGCATCTTGGAT...ACTGACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTCTTCTCCAGCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS TCA 90 bp | CAGCTATGTAAACAGTGGGCTGATTTCTATTTAAGGTCTGGCTGTTaGCCAATGAGGAAGTGCTGGCAGTTCGAGGTCCAGAAGAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLCKQWADFYLRSGC*PMRKCWQFEVQKNV Trigger: TACGTTCTTCTGGACCTCGAACTGCCAGCACTTCCTCATTGGTCAACAGCCAGACCTTAAATAGAAATCAGCCCACTGTTTACATAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS CCA 90 bp | CCTTGGGTTGACTACGGGAGATCATCTCATCAGTATTTGGAGGACTaGCAGCTATGTAAACAGTGGGCTGATTTCTATTTAAGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PWVDYGRSSHQYLED*QLCKQWADFYLRSG Trigger: GCCAGACCTTAAATAGAAATCAGCCCACTGTTTACATAGCTGCCAGTCCTCCAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCACATCTGTTGAGAAAGGTTaGATGTCCCTTTGCTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LGSALWMYRQTQLSFYLTSVEKG*MSLCCL Trigger: TAGGCAGCAAAGGGACATCAAACCTTTCTCAACAGA...TGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTGGAGAAGACAAAACGACATGTTTGGTCACCCACTGCTCAAGTCAGTAACCTGAAAATCAATTaGGTGGCTTCCTTGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLLEKTKRHVWSPTAQVSNLKIN*VASLGH Trigger: ATGGCCCAAGGAAGCCACCAAATTGATTTTCAGGTT...ACTGACTTGAGCAGTGGGTGACCAAACATGTCGTTTTGTCTTCTCCAGCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCGTTTCCCACATCTACTGGCACTATGTGGCAGCAGAGTTCTCAGTCAAACATGTGGTCCTCGGGCTaGAAAAAGATCAATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VAFPTSTGTMWQQSSQSNMWSSG*KKINFF Trigger: AAAGAAATTGATCTTTTTCAAGCCCGAGGACCACAT...GTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGGAAACGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGGAGCGCACTGTGGATGTACAGACAGACACAGCTTTCCTTTTATCTCACACACCATAAAGATACCTaGTACTCTCCTGAGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGSALWMYRQTQLSFYLTHHKDT*YSPERE Trigger: TTCTCTCTCAGGAGAGTACAAGGTATCTTTATGGTG...TGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGCACCCAGCCAGAATGTaGTTGTGTCTGCCGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFISLMLSTLWHCFSQVRHPARM*LCLPSC Trigger: ACAGCTCGGCAGACACAACAACATTCTGGCTGGGTG...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCGTGCACCAGCAGAGCTaGTGTGTAGGCAGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: VTKIVYPAKSQNHQLKISVHQQS*CVGSII Trigger: GATGATGCTGCCTACACACAAGCTCTGCTGGTGCAC...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS CCA 90 bp | ACTAGGAGTTGTAATATAAGGCCTAATATAGATAGAATTTCCCTGTaGACTGTTCAGTACAGGCGGAGGTACACCATGTATGTGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRSCNIRPNIDRISL*TVQYRRRYTMYVQR Trigger: TCTTTGCACATACATGGTGTACCTCCGCCTGTACTGAACAGTCCACAGGGAAATTCTATCTATATTAGGCCTTATATTACAACTCCTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
||
| CDS-3UTR CAA 90 bp | GTTACAAAGATAGTTTACCCAGCTAAATCACAAAACCATCAACTCAAGATATCCTTTGATCTTTGGGTTTaGGTGGCACAGGGCCTACAA | + |
|
Preference number: 5 (lower is better) Translates to: VTKIVYPAKSQNHQLKISFDLWV*VAQGLQ Trigger: TTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAA...GGATATCTTGAGTTGATGGTTTTGTGATTTAGCTGGGTAAACTATCTTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATTTCATTAATGCTTTCTACCTTATGGCATTGCTTTTCTCAGGTAAGGTCATCTCATCAGTATTaGGAGGACTGGCAGCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: SFISLMLSTLWHCFSQVRSSHQY*EDWQLC Trigger: ACATAGCTGCCAGTCCTCCAAATACTGATGAGATGA...CCTTACCTGAGAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTCTCTTTGTGTATGTAGTGTTTCACCAAAAGCTCTAACAACACAAAAAATCCAGCTTTTTCTTTaGCATCTCGAGCTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSLCVCSVSPKALTTQKIQLFL*HLELSL Trigger: CAAAGAGAGCTCGAGATGCAAAAGAAAAAGCTGGAT...TTTTTGTGTTGTTAGAGCTTTTGGTGAAACACTACATACACAAAGAGAAGGAAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
||
| CDS TCA 90 bp | AAGAACGTAATTTTGAAGAACTGTTTCTTTGTGGGGGTTCAAGTTTaGTTTCTATCTGGTTCTTTCGAGGTCCTGTTGAAATATTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KNVILKNCFFVGVQV*FLSGSFEVLLKYSE Trigger: TTCAGAATATTTCAACAGGACCTCGAAAGAACCAGATAGAAATCAAACTTGAACCCCCACAAAGAAACAGTTCTTCAAAATTACGTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS GCA 72 bp | GGCAGTGCAATTCCACTGAGCACCTTCCTCATCCTCTaGGTCTTGGGTCTTTGGTGCTTTGATGGTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: GSAIPLSTFLIL*VLGLWCFDGGP Trigger: AGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | TTTGCATCTCGAGCTCTCTTTGAAGCCGTTCCATCCTaGCCTTCTGGTGCACCAGCAGAGCTTGTGTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: FASRALFEAVPS*PSGAPAELVCR Trigger: CCTACACACAAGCTCTGCTGGTGCACCAGAAGGCCAGGATGGAACGGCTTCAAAGAGAGCTCGAGATGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS TCA 72 bp | CCGCATGCCTTGCTCATCTCCTGCGGTGGCATTGGCTaGAATATAGACCTTGGGTTGACTACGGGAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: PHALLISCGGIG*NIDLGLTTGDH Trigger: ATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCATGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS TCA 72 bp | GATGGCCCAGAGTTTGTAGATATGAAGAGTGTCGGTTaGTTCCGCATGCCTTGCTCATCTCCTGCGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: DGPEFVDMKSVG*FRMPCSSPAVA Trigger: TGCCACCGCAGGAGATGAGCAAGGCATGCGGAATCAACCGACACTCTTCATATCTACAAACTCTGGGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS GCA 72 bp | GGATTAAGGCCGGGTGATTCAGAAACGTACAGGCAGTaGAATTCCACTGAGCACCTTCCTCATCCTCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: GLRPGDSETYRQ*NSTEHLPHPLR Trigger: ACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCCTGTACGTTTCTGAATCACCCGGCCTTAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | GATTCCGCATGCCTTGCTCATCTCCTGCGGTGGCATTaGCTGAAATATAGACCTTGGGTTGACTACGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DSACLAHLLRWH*LKYRPWVDYGR Trigger: TCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCATGCGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CCA 72 bp | GCTCACTTGCCCAGACATGTTCCTGGAGGCTGCAGATaGCCCAGAGTTTGTAGATATGAAGAGTGTCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AHLPRHVPGGCR*PRVCRYEECRL Trigger: CAACCGACACTCTTCATATCTACAAACTCTGGGCCATCTGCAGCCTCCAGGAACATGTCTGGGCAAGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 72 bp | AGATGGCCCAGAGTTTGTAGATATGAAGAGTGTCGGTaGATTCCGCATGCCTTGCTCATCTCCTGCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RWPRVCRYEECR*IPHALLISCGG Trigger: GCCACCGCAGGAGATGAGCAAGGCATGCGGAATCAACCGACACTCTTCATATCTACAAACTCTGGGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CCA 72 bp | TCGGTTGATTCCGCATGCCTTGCTCATCTCCTGCGGTaGCATTGGCTGAAATATAGACCTTGGGTTGACTAC | + |
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Preference number: 6 (lower is better) Translates to: SVDSACLAHLLR*HWLKYRPWVDY Trigger: GTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATGAGCAAGGCATGCGGAATCAACCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 72 bp | GCAATTCCACTGAGCACCTTCCTCATCCTCTGCGTCTaGGGTCTTTGGTGCTTTGATGGTGGACCTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: AIPLSTFLILCV*GLWCFDGGPLI Trigger: GATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CAA 90 bp | ACAGGCAGTGCAATTCCACTGAGCACCTTCCTCATCCTCTGCGTCTaGGGTCTTTGGTGCTTTGATGGTGGACCTTTGATCTTTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TGSAIPLSTFLILCV*GLWCFDGGPLIFGF Trigger: AAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS TCA 72 bp | GCGTCTTGGGTCTTTGGTGCTTTGATGGTGGACCTTTaGTCTTTGGGTTTTGGTGGCACAGGGCCTACAAAT | + |
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Preference number: 6 (lower is better) Translates to: ASWVFGALMVDL*SLGFGGTGPTN Trigger: ATTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS TCA 72 bp | CTTCCTCATCCTCTGCGTCTTGGGTCTTTGGTGCTTTaGTGGTGGACCTTTGATCTTTGGGTTTTGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LPHPLRLGSLVL*WWTFDLWVLVA Trigger: TGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS GCA 72 bp | GGACTGTTCAGTACAGGCGGAGGTACACCATGTATGTaGAAAGATGTAGGAGTACTACGGCCAGTCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: GLFSTGGGTPCM*KDVGVLRPVCM Trigger: CATACAGACTGGCCGTAGTACTCCTACATCTTTGCACATACATGGTGTACCTCCGCCTGTACTGAACAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS GCA 72 bp | AGCACCTTCCTCATCCTCTGCGTCTTGGGTCTTTGGTaGTTTGATGGTGGACCTTTGATCTTTGGGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: STFLILCVLGLW*FDGGPLIFGFW Trigger: CCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | CTGAGCACCTTCCTCATCCTCTGCGTCTTGGGTCTTTaGTGCTTTGATGGTGGACCTTTGATCTTTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LSTFLILCVLGL*CFDGGPLIFGF Trigger: AAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CAA 72 bp | TGCGTCTTGGGTCTTTGGTGCTTTGATGGTGGACCTTaGATCTTTGGGTTTTGGTGGCACAGGGCCTACAAA | + |
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Preference number: 6 (lower is better) Translates to: CVLGLWCFDGGP*IFGFWWHRAYK Trigger: TTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS TCA 72 bp | ATTGGATGCAGGATAAGTAGTCCAAGGTCCAGGCTGTaGAGGTTGATAGGCTTGCTGAGGGTTCATGGGATT | + |
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Preference number: 6 (lower is better) Translates to: IGCRISSPRSRL*RLIGLLRVHGI Trigger: AATCCCATGAACCCTCAGCAAGCCTATCAACCTTCACAGCCTGGACCTTGGACTACTTATCCTGCATCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS TCA 72 bp | AAACAGTGGGCTGATTTCTATTTAAGGTCTGGCTGTTaGCCAATGAGGAAGTGCTGGCAGTTCGAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KQWADFYLRSGC*PMRKCWQFEVQ Trigger: CTGGACCTCGAACTGCCAGCACTTCCTCATTGGTCAACAGCCAGACCTTAAATAGAAATCAGCCCACTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 72 bp | TCCCTTTGCTGCCTAGGTGAAATCCAAGATGCGGTGTaGAGTTTGAAGCACCAGATGTACTGGGCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SLCCLGEIQDAV*SLKHQMYWAFQ Trigger: TTGGAATGCCCAGTACATCTGGTGCTTCAAACTCAACACCGCATCTTGGATTTCACCTAGGCAGCAAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 72 bp | CCTTGGGTTGACTACGGGAGATCATCTCATCAGTATTaGGAGGACTGGCAGCTATGTAAACAGTGGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PWVDYGRSSHQY*EDWQLCKQWAD Trigger: ATCAGCCCACTGTTTACATAGCTGCCAGTCCTCCAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 90 bp | CTCATCCTCTGCGTCTTGGGTCTTTGGTGCTTTGATGGTGGACCTTaGATCTTTGGGTTTTGGTGGCACAGGGCCTACAAATCCAATATT | + |
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Preference number: 6 (lower is better) Translates to: LILCVLGLWCFDGGP*IFGFWWHRAYKSNI Trigger: AATATTGGATTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCACCAAAGACCCAAGACGCAGAGGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | CTTGGGTTGACTACGGGAGATCATCTCATCAGTATTTaGAGGACTGGCAGCTATGTAAACAGTGGGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: LGLTTGDHLISI*RTGSYVNSGLI Trigger: AATCAGCCCACTGTTTACATAGCTGCCAGTCCTCCAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CCA 72 bp | CATCTCCTGCGGTGGCATTGGCTGAAATATAGACCTTaGGTTGACTACGGGAGATCATCTCATCAGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: HLLRWHWLKYRP*VDYGRSSHQYL Trigger: CAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CCA 72 bp | ACTGCTGCATTTCTTCGAGTGACGGTATCTGGGAAATaGAATTTGATCTCTTCAGGCGCCTTCGAGTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: TAAFLRVTVSGK*NLISSGAFELD Trigger: ATCTAACTCGAAGGCGCCTGAAGAGATCAAATTCCATTTCCCAGATACCGTCACTCGAAGAAATGCAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CAA 72 bp | CTGAAAAATTCAGGTCTCCTTCACCATAAAGATACCTaGTACTCTCCTGAGAGAGAACAGCGCAGCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LKNSGLLHHKDT*YSPEREQRSRH Trigger: ATGCCTGCTGCGCTGTTCTCTCTCAGGAGAGTACAAGGTATCTTTATGGTGAAGGAGACCTGAATTTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 90 bp | TTCCATCTCATTGACCTCAGATTTGAGTTTATCCAGCTTTTTCTTTaGCATCTCGAGCTCTCTTTGAAGCCGTTCCATCCTGGCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FHLIDLRFEFIQLFL*HLELSLKPFHPGLL Trigger: CAGAAGGCCAGGATGGAACGGCTTCAAAGAGAGCTCGAGATGCAAAAGAAAAAGCTGGATAAACTCAAATCTGAGGTCAATGAGATGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | GACTACGGGAGATCATCTCATCAGTATTTGGAGGACTaGCAGCTATGTAAACAGTGGGCTGATTTCTATTTA | + |
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Preference number: 6 (lower is better) Translates to: DYGRSSHQYLED*QLCKQWADFYL Trigger: TAAATAGAAATCAGCCCACTGTTTACATAGCTGCCAGTCCTCCAAATACTGATGAGATGATCTCCCGTAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 90 bp | TCAACTGCTGCATTTCTTCGAGTGACGGTATCTGGGAAATGGAATTaGATCTCTTCAGGCGCCTTCGAGTTAGATTATTTTCCATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: STAAFLRVTVSGKWN*ISSGAFELDYFPSH Trigger: ATGAGATGGAAAATAATCTAACTCGAAGGCGCCTGAAGAGATCAAATTCCATTTCCCAGATACCGTCACTCGAAGAAATGCAGCAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS GCA 72 bp | TCAATCTGGAGTTGTCTATTACAACTTCTCAACTGCTaGATTTCTTCGAGTGACGGTATCTGGGAAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: SIWSCLLQLLNC*ISSSDGIWEME Trigger: TTCCATTTCCCAGATACCGTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAATAGACAACTCCAGATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS GCA 72 bp | ATGTCAATCTGGAGTTGTCTATTACAACTTCTCAACTaGTGCATTTCTTCGAGTGACGGTATCTGGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: MSIWSCLLQLLN*CISSSDGIWEM Trigger: CATTTCCCAGATACCGTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAATAGACAACTCCAGATTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | TGCTTTGATGGTGGACCTTTGATCTTTGGGTTTTGGTaGCACAGGGCCTACAAATCCAATATTGTCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: CFDGGPLIFGFW*HRAYKSNIVIK Trigger: TTTTATGACAATATTGGATTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CAA 72 bp | GCATTTCTTCGAGTGACGGTATCTGGGAAATGGAATTaGATCTCTTCAGGCGCCTTCGAGTTAGATTATTTT | + |
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Preference number: 6 (lower is better) Translates to: AFLRVTVSGKWN*ISSGAFELDYF Trigger: AAAATAATCTAACTCGAAGGCGCCTGAAGAGATCAAATTCCATTTCCCAGATACCGTCACTCGAAGAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CAA 90 bp | AAATATAGACCTTGGGTTGACTACGGGAGATCATCTCATCAGTATTaGGAGGACTGGCAGCTATGTAAACAGTGGGCTGATTTCTATTTA | + |
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Preference number: 6 (lower is better) Translates to: KYRPWVDYGRSSHQY*EDWQLCKQWADFYL Trigger: TAAATAGAAATCAGCCCACTGTTTACATAGCTGCCAGTCCTCCAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS TCA 72 bp | ATTTTGAAGAACTGTTTCTTTGTGGGGGTTCAAGTTTaGTTTCTATCTGGTTCTTTCGAGGTCCTGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: ILKNCFFVGVQV*FLSGSFEVLLK Trigger: TTTCAACAGGACCTCGAAAGAACCAGATAGAAATCAAACTTGAACCCCCACAAAGAAACAGTTCTTCAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000130322.2 ENSMUST00000146444.8 ENSMUST00000147938.2 |
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| CDS CAA 72 bp | TTCAGGCGCCTTCGAGTTAGATTATTTTCCATCTCATaGACCTCAGATTTGAGTTTATCCAGCTTTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FRRLRVRLFSIS*TSDLSLSSFFF Trigger: AAAGAAAAAGCTGGATAAACTCAAATCTGAGGTCAATGAGATGGAAAATAATCTAACTCGAAGGCGCCTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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| CDS CCA 72 bp | AGATCAATTTCTTTGGTTAAGCAGTCAATGTCAATCTaGAGTTGTCTATTACAACTTCTCAACTGCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: RSISLVKQSMSI*SCLLQLLNCCI Trigger: AATGCAGCAGTTGAGAAGTTGTAATAGACAACTCCAGATTGACATTGACTGCTTAACCAAAGAAATTGATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146444.8 |
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