Pregenerated sensors for TAAR7D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095569

Ensembl transcript IDs: ENSMUST00000092657.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCCAAGGAAGGCATCAATGATGGAGTCAATGAAGTATGGCAGCCATaGAAGGAGGAAGGCAGCCACTGCGATGCCCAGGGTTTTGGCTGC	+
Preference number: 5 (lower is better) Translates to: PKEGINDGVNEVWQP*KEEGSHCDAQGFGC Trigger: GCAGCCAAAACCCTGGGCATCGCAGTGGCTGCCTTCCTCCTTTCATGGCTGCCATACTTCATTGACTCCATCATTGATGCCTTCCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092657.2
CDS CCA 90 bp	TCCTTTCCCTCTTGGTCACCCTGTCCTTGTAGCTTTCTGATGCTCTaGCAGTCTGCTTGCTCATCTTCTCAATGTTCTGAGCCTGCTGTT	+
Preference number: 5 (lower is better) Translates to: SFPSWSPCPCSFLML*QSACSSSQCSEPAV Trigger: AACAGCAGGCTCAGAACATTGAGAAGATGAGCAAGCAGACTGCCAGAGCATCAGAAAGCTACAAGGACAGGGTGACCAAGAGGGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092657.2
CDS CCA 72 bp	GACTGCATAGAGGATGAGGCGAGGGCCTGGAGAGTATaGGCTCCTGACACAGGATCTGTTCAGGTTCTCATA	+
Preference number: 6 (lower is better) Translates to: DCIEDEARAWRV*APDTGSVQVLI Trigger: TATGAGAACCTGAACAGATCCTGTGTCAGGAGCCCATACTCTCCAGGCCCTCGCCTCATCCTCTATGCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092657.2
CDS CCA 72 bp	AAAGCCAAAGACTGCATAGAGGATGAGGCGAGGGCCTaGAGAGTATGGGCTCCTGACACAGGATCTGTTCAG	+
Preference number: 6 (lower is better) Translates to: KAKDCIEDEARA*RVWAPDTGSVQ Trigger: CTGAACAGATCCTGTGTCAGGAGCCCATACTCTCCAGGCCCTCGCCTCATCCTCTATGCAGTCTTTGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092657.2
CDS CAA 72 bp	AACAGGTTGGTGGTTGAGGAATTCTCCCTCAAGATTTaGCCAGAGACAATGAGTTTGATGGCTTTTCGAAAC	+
Preference number: 6 (lower is better) Translates to: NRLVVEEFSLKI*PETMSLMAFRN Trigger: GTTTCGAAAAGCCATCAAACTCATTGTCTCTGGCAAAATCTTGAGGGAGAATTCCTCAACCACCAACCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092657.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu