Pregenerated sensors for T2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058159Ensembl transcript IDs: ENSMUST00000163578.8, ENSMUST00000169635.3, ENSMUST00000234809.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTaGTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGG | + |
|
Preference number: 1 (lower is better) Translates to: GWSLMSESAQRCCPL*CLPDCLHHPNSRFG Trigger: CCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR GCA 90 bp | TGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTaGCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: WSLMSESAQRCCPLC*LPDCLHHPNSRFGL Trigger: GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR GCA 90 bp | CTAGCCATGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTaGCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCA | + |
|
Preference number: 1 (lower is better) Translates to: LAMGWSLMSESAQRC*PLCCLPDCLHHPNS Trigger: TGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCATGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR CCA 90 bp | CACAGCTTCTCTGCCATCACTGCTGGCCCTGGGCTTCAGCTCCGCTaGGCTATTAAGGCCAGCACTTTGTCTCTGGTGCTCACATCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: HSFSAITAGPGLQLR*AIKASTLSLVLTSD Trigger: ATCAGATGTGAGCACCAGAGACAAAGTGCTGGCCTTAATAGCCCAGCGGAGCTGAAGCCCAGGGCCAGCAGTGATGGCAGAGAAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 90 bp | GGCTTCAGCTCCGCTGGGCTATTAAGGCCAGCACTTTGTCTCTGGTaGTCACATCTGATCACATCTCTGGCCTCTCTGGTTCACACATTC | + |
|
Preference number: 1 (lower is better) Translates to: GFSSAGLLRPALCLW*SHLITSLASLVHTF Trigger: GAATGTGTGAACCAGAGAGGCCAGAGATGTGATCAGATGTGAGCACCAGAGACAAAGTGCTGGCCTTAATAGCCCAGCGGAGCTGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 90 bp | TGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTaGATGATGGTGTCACCTTTACAACGAAAGAACAAGGGCTGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: CLPDCLHHPNSRFGL*MMVSPLQRKNKGWR Trigger: TCTCCAGCCCTTGTTCTTTCGTTGTAAAGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| 3UTR TCA 90 bp | TGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATaGTGGTGTCACCTTTACAACGAAAGAACAAGGGCTGGAGAGATG | + |
|
Preference number: 1 (lower is better) Translates to: CLTVSIIQIHGSGSA*WCHLYNERTRAGEM Trigger: CATCTCTCCAGCCCTTGTTCTTTCGTTGTAAAGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| 3UTR TCA 90 bp | TGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATaGTGGTGTCACCTCGCTGCTTATCATAATGCAGACTCAAAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: CLTVSIIQIHGSGSA*WCHLAAYHNADSKK Trigger: TTTCTTTGAGTCTGCATTATGATAAGCAGCGAGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169635.3 |
||
| 3UTR GCA 90 bp | ATCACATCTCTGGCCTCTCTGGTTCACACATTCCATCTTCAGATATaGCTAATCCAACCCCTTGTTGGAATCTACTTCCGCTCCTTATAT | + |
|
Preference number: 1 (lower is better) Translates to: ITSLASLVHTFHLQI*LIQPLVGIYFRSLY Trigger: ATATAAGGAGCGGAAGTAGATTCCAACAAGGGGTTGGATTAGGCATATCTGAAGATGGAATGTGTGAACCAGAGAGGCCAGAGATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 90 bp | TATAACGCTCATTTCACTTCATCAAACACCCTTGGCTCACTTTCATaGCTCCTTATCCTTACCCATAATTTGAAAGCTGTTTTAAAAATA | + |
|
Preference number: 1 (lower is better) Translates to: YNAHFTSSNTLGSLS*LLILTHNLKAVLKI Trigger: TATTTTTAAAACAGCTTTCAAATTATGGGTAAGGATAAGGAGGCATGAAAGTGAGCCAAGGGTGTTTGATGAAGTGAAATGAGCGTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCACTGTGCTGCCTGCCTaGCTGTCTCCATCATCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PLCCLPDCLHHPNSRFGLTVLPA*LSPSSK Trigger: TTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGT...GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGACTGTGCTGCCTGCCTaGCTGTCTCCATCATCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CLPDCLHHPNSRFGLCMMTVLPA*LSPSSK Trigger: TTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGT...CATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGCAGTTAAGAGCGCTGGCTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCCGAAAGAACAAGGGCTaGAGAGATGGCTCAGCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: DQQLRALAALPEVLSSIPRKNKG*RDGSAV Trigger: AACCGCTGAGCCATCTCTCCAGCCCTTGTTCTTTCG...GGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGCGCTCTTAACTGCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTTTTATTTAAGATGCTaGAAAGAGAGCACCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AHCAACLTVSIIQIHGSGFYLRC*KESTRQ Trigger: CTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAA...GCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGCCTCTGTCATATCCTGTTTaGACTTTATCTAATGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: WSLMSESAQRCCPLCCLPLSYPV*TLSNDC Trigger: ACAGTCATTAGATAAAGTCCAAACAGGATATGACAG...AGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTCAGCACAGTGCCTTCCACAGCTTCTCTGCCATCACTGCTGGCCCTGGGCTTATTTTATTTAAGATaGTGCAAAGAGAGCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LFSTVPSTASLPSLLALGLFYLR*CKESTR Trigger: CCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAA...GCCCAGGGCCAGCAGTGATGGCAGAGAAGCTGTGGAAGGCACTGTGCTGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR-3UTR TCA 90 bp | GATCAGCAGTTAAGAGCGCTGGCTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCATCTCTAAGGAGTTCTaGTGTCCTCTTCTGTTATGC | + |
|
Preference number: 2 (lower is better) Translates to: DQQLRALAALPEVLSSIPISKEF*CPLLLC Trigger: GCATAACAGAAGAGGACATCAGAACTCCTTAGAGAT...GGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGCGCTCTTAACTGCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTTATTTTATTTAAGATaGTGCAAAGAGAGCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLCCLPDCLHHPNSRFGLLFYLR*CKESTR Trigger: CCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAA...GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATGCCTAATCCAACCCCTTGTTGGAATCTACTTCCGCTCCTTATATTTTTCTATGAGTCAGAAGAAGTaGCTAGCCATGGGCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ICLIQPLVGIYFRSLYFSMSQKK*LAMGWS Trigger: GCTCCAGCCCATGGCTAGTCACTTCTTCTGACTCAT...AGAAAAATATAAGGAGCGGAAGTAGATTCCAACAAGGGGTTGGATTAGGCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCAAAGAGAGCACCAGGCAGAAGGACCATGAGTCAGAAGAAGTGACTAGCCTGTCATATCCTGTTTaGACTTTATCTAATGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: CCKESTRQKDHESEEVTSLSYPV*TLSNDC Trigger: ACAGTCATTAGATAAAGTCCAAACAGGATATGACAG...GCTAGTCACTTCTTCTGACTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAAAGAGAGCACCAGGCAGAAGGACCATGAGTCAGAAGAAGTGACTAGCCATCTGTCATATCCTGTTTaGACTTTATCTAATGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: CKESTRQKDHESEEVTSHLSYPV*TLSNDC Trigger: ACAGTCATTAGATAAAGTCCAAACAGGATATGACAG...ATGGCTAGTCACTTCTTCTGACTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR TCA 72 bp | GTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGCCTaGCTGTCTCCATCATCCAAATTCACGGTTCGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VCSALLPTVLPA*LSPSSKFTVRA Trigger: AGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR TCA 72 bp | GAAGAAGTGACTAGCCATGGGCTGGAGCCTCATGTCTaGGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EEVTSHGLEPHV*VCSALLPTVLP Trigger: AGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCATGGCTAGTCACTTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR CCA 72 bp | TCTGCCATCACTGCTGGCCCTGGGCTTCAGCTCCGCTaGGCTATTAAGGCCAGCACTTTGTCTCTGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAITAGPGLQLR*AIKASTLSLVL Trigger: GAGCACCAGAGACAAAGTGCTGGCCTTAATAGCCCAGCGGAGCTGAAGCCCAGGGCCAGCAGTGATGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 72 bp | CTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTaGCTGACTGTCTCCATCATCCAAATTCACGGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: LSLLSAAAHCAA*LTVSIIQIHGS Trigger: CGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR GCA 72 bp | TCACCCCTTCTGGAAATTCCTTTCTGTTCAGCACAGTaGCTTCCACAGCTTCTCTGCCATCACTGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPLLEIPFCSAQ*LPQLLCHHCWP Trigger: GGGCCAGCAGTGATGGCAGAGAAGCTGTGGAAGGCACTGTGCTGAACAGAAAGGAATTTCCAGAAGGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR CCA 72 bp | AGCTCCGCTGGGCTATTAAGGCCAGCACTTTGTCTCTaGTGCTCACATCTGATCACATCTCTGGCCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSAGLLRPALCL*CSHLITSLASL Trigger: CAGAGAGGCCAGAGATGTGATCAGATGTGAGCACCAGAGACAAAGTGCTGGCCTTAATAGCCCAGCGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 72 bp | TCCGCTGGGCTATTAAGGCCAGCACTTTGTCTCTGGTaGTCACATCTGATCACATCTCTGGCCTCTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SAGLLRPALCLW*SHLITSLASLV Trigger: AACCAGAGAGGCCAGAGATGTGATCAGATGTGAGCACCAGAGACAAAGTGCTGGCCTTAATAGCCCAGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR TCA 72 bp | GTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATaGTGGTGTCACCTTTACAACGAAAGAACAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSIIQIHGSGSA*WCHLYNERTRA Trigger: AGCCCTTGTTCTTTCGTTGTAAAGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| 3UTR TCA 72 bp | GTATTCTTGCAATACTGGGGATTGAACTCAGGGCCTTaGGCATCAAGTAAAGCAGTCGTCCACTCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VFLQYWGLNSGP*ASSKAVVHSAT Trigger: TGTGGCTGAGTGGACGACTGCTTTACTTGATGCTCAAGGCCCTGAGTTCAATCCCCAGTATTGCAAGAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 72 bp | CTGGCCTCTCTGGTTCACACATTCCATCTTCAGATATaGCTAATCCAACCCCTTGTTGGAATCTACTTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LASLVHTFHLQI*LIQPLVGIYFR Trigger: GCGGAAGTAGATTCCAACAAGGGGTTGGATTAGGCATATCTGAAGATGGAATGTGTGAACCAGAGAGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| 3UTR GCA 72 bp | GACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTaGATGATGGTGTCACCTTTACAACGAAAGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: DCLHHPNSRFGL*MMVSPLQRKNK Trigger: CTTGTTCTTTCGTTGTAAAGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| 3UTR CCA 72 bp | ATTCCATCTTCAGATATGCCTAATCCAACCCCTTGTTaGAATCTACTTCCGCTCCTTATATTTTTCTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: IPSSDMPNPTPC*NLLPLLIFFYL Trigger: TAAGTAGAAAAATATAAGGAGCGGAAGTAGATTCCAACAAGGGGTTGGATTAGGCATATCTGAAGATGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCTCGGAGGGCAGGTCCTaGTTGAGGCTGCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MGWSLMSESAQRCCPLCCSEGRS*LRLLLR Trigger: CCTGAGCAGCAGCCTCAAGCAGGACCTGCCCTCCGA...GCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGCCTAGGCTTCGGGCCCTGTaGTCAGCATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSLMSESAQRCCPLCCLPRLRAL*SASMSA Trigger: TGCAGACATGGATGCTGAGCACAGGGCCCGAAGCCT...AGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGCCTGGTCTGGATCACGTGTaGAAGGGTCAGGGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLMSESAQRCCPLCCLPGLDHV*KGQGCC Trigger: ACAGCACCCCTGACCCTTGCACACGTGATCCAGACC...AGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCCAAGGTCTGCTGTGCTaGCTTCTCTTTGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAGASCLSLLSAAAHCAAQGLLC*LLFVLH Trigger: GTGGAGGACAAAGAGAAGGCAGCACAGCAGACCTTG...GGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGCCTCGGCAAGGTCTGCTGTaGTGCCTTCTCTTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSLMSESAQRCCPLCCLPRQGLL*CLLFVL Trigger: GAGGACAAAGAGAAGGCAGCACAGCAGACCTTGCCG...AGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCGGCAAGGTCTGCTGTaGTGCCTTCTCTTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGWSLMSESAQRCCPLCCRQGLL*CLLFVL Trigger: GAGGACAAAGAGAAGGCAGCACAGCAGACCTTGCCG...GCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCCAAGAGCTTCCTCCTaGACCAGTTTCCAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: MGWSLMSESAQRCCPLCCPRASS*TSFQKS Trigger: GGATTTCTGGAAACTGGTTCAGGAGGAAGCTCTTGG...GCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCGCCTCCACCACAGGATaGGTCTGGATCACGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLCCLPDCLHHPNSRFGLASTTG*VWITCA Trigger: TGCACACGTGATCCAGACCCATCCTGTGGTGGAGGC...GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCACGAGCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACGGAAGGGAACCTGGTTaGAGCCTTGGGCGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QARASLPDTYLAAYHNADGREPG*SLGRGC Trigger: GCATCCCCGCCCAAGGCTTCAACCAGGTTCCCTTCC...GTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGCTCGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GATCAGCAGTTAAGAGCGCTGGCTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCACCTGGAAGGGAACCTaGTTGAAGCCTTGGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DQQLRALAALPEVLSSIPTWKGT*LKPWAG Trigger: CCCCGCCCAAGGCTTCAACCAGGTTCCCTTCCAGGT...GGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGCGCTCTTAACTGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCACGAGCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACCGGTCTCCCTTCTCCTaGAAGCAGCTGGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QARASLPDTYLAAYHNADRSPFS*KQLVAR Trigger: CCTGGCCACCAGCTGCTTCCAGGAGAAGGGAGACCG...GTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGCTCGTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGTGTACGTTCTCTTaGTGGAACATCTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGWSLMSESAQRCCPLCCLCTFS*WNICLC Trigger: ACACAGGCAGATGTTCCACCAAGAGAACGTACACAG...GCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | GCCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCGGACTTTCTGGGCTCTaGCACTTCAGAAATCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHCAACLTVSIIQIHGSGGLSGL*HFRNRR Trigger: CCTCCGATTTCTGAAGTGCCAGAGCCCAGAAAGTCC...GCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTTAAGAGCGCTGGCTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTGTTCTCTCCCTGGATaGTCCTGTGTTCCCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QQLRALAALPEVLSSIPSCSLPG*SCVPWR Trigger: ACGCCAGGGAACACAGGACCATCCAGGGAGAGAACA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGCGCTCTTAACTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTTCCTGTTCTCTCCCTaGATGGTCCTGTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAAHCAACLTVSIIQIHGFLFSP*MVLCSL Trigger: CAGGGAACACAGGACCATCCAGGGAGAGAACAGGAA...ACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGGCCTCCACCACAGGATaGGTCTGGATCACGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPDCLHHPNSRFGLCMMASTTG*VWITCA Trigger: TGCACACGTGATCCAGACCCATCCTGTGGTGGAGGC...CATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| 3UTR CAA 72 bp | GGGCTTCAGCTCCGCTGGGCTATTAAGGCCAGCACTTaGTCTCTGGTGCTCACATCTGATCACATCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQLRWAIKAST*SLVLTSDHISG Trigger: GCCAGAGATGTGATCAGATGTGAGCACCAGAGACAAAGTGCTGGCCTTAATAGCCCAGCGGAGCTGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | GCCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTTGGTGGAACATCTaGCTGTGTACGTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHCAACLTVSIIQIHGSGSWWNI*LCTFSW Trigger: CCAAGAGAACGTACACAGGCAGATGTTCCACCAAGA...GCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR GCA 90 bp | CCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCCCTTGGTGGAACATCTaGCTGTGTACGTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCCLPDCLHHPNSRFGLPWWNI*LCTFSW Trigger: CCAAGAGAACGTACACAGGCAGATGTTCCACCAAGG...GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR GCA 90 bp | CCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGGTGTCAGGTCTGGATCACGTGTaGAAGGGTCAGGGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDCLHHPNSRFGLCMMVSGLDHV*KGQGCC Trigger: ACAGCACCCCTGACCCTTGCACACGTGATCCAGACC...TGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTTAAGAGCGCTGGCTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCCCAAGAGCTTCCTCCTaGACCAGTTTCCAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QQLRALAALPEVLSSIPSPRASS*TSFQKS Trigger: GGATTTCTGGAAACTGGTTCAGGAGGAAGCTCTTGG...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGCGCTCTTAACTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGCAAGGTCTGCTGTGCTaGCTTCTCTTTGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPDCLHHPNSRFGLCMMQGLLC*LLFVLH Trigger: GTGGAGGACAAAGAGAAGGCAGCACAGCAGACCTTG...CATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTGTACGTTCTCTTGGTaGAACATCTGCCTGTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: AAAHCAACLTVSIIQIHGCTFSW*NICLCT Trigger: CGTACACAGGCAGATGTTCCACCAAGAGAACGTACA...ACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGCAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCCTGTGTACGTTCTCTTaGTGGAACATCTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLCCLPDCLHHPNSRFGLLCTFS*WNICLC Trigger: ACACAGGCAGATGTTCCACCAAGAGAACGTACACAG...GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGCTCTGGGCAGCTCCATaGTGTTGGCATCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPDCLHHPNSRFGLCMMLWAAP*CWHLFL Trigger: GAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAG...CATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGGTGTCACCTTTCCTGTTCTCTCCCTaGATGGTCCTGTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCLHHPNSRFGLCMMVSPFLFSP*MVLCSL Trigger: CAGGGAACACAGGACCATCCAGGGAGAGAACAGGAA...AGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACTCAAAGAAACCTGGAAGCAGCTGGTaGCCAGGGCCTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLPDTYLAAYHNADSKKPGSSW*PGPGIH Trigger: ATGAATCCCAGGCCCTGGCCACCAGCTGCTTCCAGG...TTTCTTTGAGTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACTCAAAGAAACCTCGATGCAGCCTCTaGGCAGCTCCATGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLPDTYLAAYHNADSKKPRCSL*AAPCCW Trigger: CCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGG...TTTCTTTGAGTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACTCAAAGAAAGGTCTGGATCACGTGTaGAAGGGTCAGGGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLPDTYLAAYHNADSKKGLDHV*KGQGCC Trigger: ACAGCACCCCTGACCCTTGCACACGTGATCCAGACC...TTTCTTTGAGTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGGTGTCACCTGCAGCTCCATGCTGTTaGCATCTTTTTCTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCLHHPNSRFGLCMMVSPAAPCC*HLFLHS Trigger: GGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGC...AGGTGACACCATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR TCA 90 bp | ATATGCCTAATCCAACCCCTTGTTGGAATCTACTTCCGCTCCTTATATTTTTCTGGAAGGGAACCTGGTTaGAGCCTTGGGCGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ICLIQPLVGIYFRSLYFSGREPG*SLGRGC Trigger: GCATCCCCGCCCAAGGCTTCAACCAGGTTCCCTTCC...AGAAAAATATAAGGAGCGGAAGTAGATTCCAACAAGGGGTTGGATTAGGCATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAAGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACTCGGAGGGCAGGTCCTaGTTGAGGCTGCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSLFYLRCCKESTRQKDSEGRS*LRLLLR Trigger: CCTGAGCAGCAGCCTCAAGCAGGACCTGCCCTCCGA...GTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | GCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACTCAAAGAAATGTTCTCTCCCTGGATaGTCCTGTGTTCCCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLPDTYLAAYHNADSKKCSLPG*SCVPWR Trigger: ACGCCAGGGAACACAGGACCATCCAGGGAGAGAACA...TTTCTTTGAGTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACACCTGGAAGGGAACCTaGTTGAAGCCTTGGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSLFYLRCCKESTRQKDTWKGT*LKPWAG Trigger: CCCCGCCCAAGGCTTCAACCAGGTTCCCTTCCAGGT...GTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCCTCGATGCAGCCTCTaGGCAGCTCCATGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSLFYLRCCKESTRQKDPRCSL*AAPCCW Trigger: CCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGG...GTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR TCA 90 bp | CTTATCATAATGCAGACTCAAAGAAAAAGAAAGCTGTCATATCCTGTTTGGACTAGGGCAGGTCCTGCTTaGGGCTGCTGCTCAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIIMQTQRKRKLSYPVWTRAGPA*GCCSGV Trigger: AACCCCTGAGCAGCAGCCTCAAGCAGGACCTGCCCT...AGTCCAAACAGGATATGACAGCTTTCTTTTTCTTTGAGTCTGCATTATGATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR GCA 90 bp | AAAACAAGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACAGGCTTCGGGCCCTGTaGTCAGCATCCATGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSLFYLRCCKESTRQKDRLRAL*SASMSA Trigger: TGCAGACATGGATGCTGAGCACAGGGCCCGAAGCCT...GTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | AGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCATGAGGGACTTTCTGGGCTCTaGCACTTCAGAAATCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFYLRCCKESTRQKDHEGLSGL*HFRNRR Trigger: CCTCCGATTTCTGAAGTGCCAGAGCCCAGAAAGTCC...CTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTGGAATCTACTTCCGCTCCTTATATTTTTCTACTTATAACGCTCATGCCTCCACCACAGGATaGGTCTGGATCACGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLVGIYFRSLYFSTYNAHASTTG*VWITCA Trigger: TGCACACGTGATCCAGACCCATCCTGTGGTGGAGGC...ATGAGCGTTATAAGTAGAAAAATATAAGGAGCGGAAGTAGATTCCAACAAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTCTACCGGATACCTACCTCGCTGCTTATCATAATGCAGACTCAAAGAAATCTTGGTGGAACATCTaGCTGTGTACGTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLPDTYLAAYHNADSKKSWWNI*LCTFSW Trigger: CCAAGAGAACGTACACAGGCAGATGTTCCACCAAGA...TTTCTTTGAGTCTGCATTATGATAAGCAGCGAGGTAGGTATCCGGTAGAGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163578.8 |
||
| CDS-3UTR CCA 90 bp | CTTATCATAATGCAGACTCAAAGAAAAAGAAAGCTGTCATATCCTGTTTGGACTCCTGGAAGCAGCTGGTaGCCAGGGCCTGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIMQTQRKRKLSYPVWTPGSSW*PGPGIH Trigger: ATGAATCCCAGGCCCTGGCCACCAGCTGCTTCCAGG...AGTCCAAACAGGATATGACAGCTTTCTTTTTCTTTGAGTCTGCATTATGATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCATGAGTGTACGTTCTCTTGGTaGAACATCTGCCTGTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: SLFYLRCCKESTRQKDHECTFSW*NICLCT Trigger: CGTACACAGGCAGATGTTCCACCAAGAGAACGTACA...CTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCTTCTGACGAGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATGCAGCTCCATGCTGTTaGCATCTTTTTCTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPLLTSLKTATVYLHIINAAPCC*HLFLHS Trigger: GGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGC...ATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACTCGTCAGAAGAGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR GCA 90 bp | CTTATCATAATGCAGACTCAAAGAAAAAGAAAGCTGTCATATCCTGTTTGGACTCCTTGGTGGAACATCTaGCTGTGTACGTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIIMQTQRKRKLSYPVWTPWWNI*LCTFSW Trigger: CCAAGAGAACGTACACAGGCAGATGTTCCACCAAGG...AGTCCAAACAGGATATGACAGCTTTCTTTTTCTTTGAGTCTGCATTATGATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CAA 90 bp | ATGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCTGGAAGGGAACCTGGTaGAAGCCTTGGGCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MGWSLMSESAQRCCPLCCWKGTW*KPWAGM Trigger: CATCCCCGCCCAAGGCTTCAACCAGGTTCCCTTCCA...GCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 90 bp | AGACTCGCTGTGTCCCCTCGATGCTTGGGTGGATCCAAGCCAGGTTaGTGCGGGCCCTGTTTTATCCTCTCCTTCTCCGGGCCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLAVSPRCLGGSKPG*CGPCFILSFSGPSS Trigger: GGAGGATGGCCCGGAGAAGGAGAGGATAAAACAGGGCCCGCACCAACCTGGCTTGGATCCACCCAAGCATCGAGGGGACACAGCGAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCTGCCTCTCTTTGTCCTCCACTaGGGTGTGACACCCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLMSESAQRCCPLCCLPLFVLH*GVTPPV Trigger: CACAGGGGGTGTCACACCCAAGTGGAGGACAAAGAG...AGGCAGGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 90 bp | TCCTCCTGGCAGGAGCAAGTGTGCCCCTCTCGTGTTCGGAGAGCTTaGTCGTGCCACACAGGGTCACTTGGTGTCTTCCTGTCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSWQEQVCPSRVRRA*SCHTGSLGVFLSSG Trigger: ACCTGAAGACAGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTGCCAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 90 bp | CCTCTCCTTCTCCGGGCCATCCTCCACAACTTCCTGTTCTCTCCCTaGATGGTCCTGTGTTCCCTGGCGTGCCCCACTGTCTTGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLRAILHNFLFSP*MVLCSLACPTVLIT Trigger: AGTGATCAAGACAGTGGGGCACGCCAGGGAACACAGGACCATCCAGGGAGAGAACAGGAAGTTGTGGAGGATGGCCCGGAGAAGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 90 bp | CAGGGTCACTTGGTGTCTTCCTGTCTTCAGGTGGGGACGTCTCTGTaGACTTTCTGGGCTCTGGCACTTCAGAAATCGGAGGGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGHLVSSCLQVGTSL*TFWALALQKSEGRS Trigger: GGACCTGCCCTCCGATTTCTGAAGTGCCAGAGCCCAGAAAGTCCACAGAGACGTCCCCACCTGAAGACAGGAAGACACCAAGTGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGAGCCTCATGTCTGAGTCTGCTCAGCGCTGCTGCCCACTGTGCTGCCCGGCTAAGATACATCTaGCTTTGGGAATCCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WAGASCLSLLSAAAHCAARLRYI*LWESVL Trigger: AAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCG...GGCAGCACAGTGGGCAGCAGCGCTGAGCAGACTCAGACATGAGGCTCCAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTGCATGATGGCTGCTGCTCAGGGGTaGGGGAGTCCTCCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLPDCLHHPNSRFGLCMMAAAQG*GSPPPL Trigger: TAGAGGAGGAGGACTCCCCAACCCCTGAGCAGCAGC...CATCATGCAGAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS-3UTR CAA 90 bp | GCCCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTATCGACTTGCTGTCTaGGCCTCCACCACAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: AHCAACLTVSIIQIHGSGYRLAV*ASTTGW Trigger: CCATCCTGTGGTGGAGGCCAAGACAGCAAGTCGATA...GCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS GCA 90 bp | GTCTTGCTCTCCTCAGGTCCTCGATGCAGCCTCTGGGCAGCTCCATaGTGTTGGCATCTTTTTCTCCATTCCGTGAGCCGAGCGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLLSSGPRCSLWAAP*CWHLFLHSVSRARR Trigger: TCTTCTCGCTCGGCTCACGGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACCTGAGGAGAGCAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGCTGCCTGCCTGACTGTCTCCATCATCCAAATTCACGGTTCGGGCTCTATCGACTTGCTGTCTaGGCCTCCACCACAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PLCCLPDCLHHPNSRFGLYRLAV*ASTTGW Trigger: CCATCCTGTGGTGGAGGCCAAGACAGCAAGTCGATA...GAGCCCGAACCGTGAATTTGGATGATGGAGACAGTCAGGCAGGCAGCACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGAGAGCACCAGGCAGAAGGACCATGAGTCAGAAGAAGTGACTAGCCATGCTGCTGCTCAGGGGTaGGGGAGTCCTCCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CKESTRQKDHESEEVTSHAAAQG*GSPPPL Trigger: TAGAGGAGGAGGACTCCCCAACCCCTGAGCAGCAGC...ATGGCTAGTCACTTCTTCTGACTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 90 bp | TTGCTCGTGCCACACAGGGTCACTTGGTGTCTTCCTGTCTTCAGGTaGGGACGTCTCTGTGGACTTTCTGGGCTCTGGCACTTCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLVPHRVTWCLPVFR*GRLCGLSGLWHFRN Trigger: ATTTCTGAAGTGCCAGAGCCCAGAAAGTCCACAGAGACGTCCCCACCTGAAGACAGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 90 bp | ACTGCTGACCAGCATCTCGGTCTCCCTTCTCCTGGAAGCAGCTGGTaGCCAGGGCCTGGGATTCATCAACTTAAGTTTTATCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TADQHLGLPSPGSSW*PGPGIHQLKFYLLE Trigger: CTCCAGAAGATAAAACTTAAGTTGATGAATCCCAGGCCCTGGCCACCAGCTGCTTCCAGGAGAAGGGAGACCGAGATGCTGGTCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 90 bp | GTCTTACACATAGTCTTGCTCTCCTCAGGTCCTCGATGCAGCCTCTaGGCAGCTCCATGCTGTTGGCATCTTTTTCTCCATTCCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLHIVLLSSGPRCSL*AAPCCWHLFLHSVS Trigger: GCTCACGGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACCTGAGGAGAGCAAGACTATGTGTAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 90 bp | TCCGTCCTTGTCTTACACATAGTCTTGCTCTCCTCAGGTCCTCGATaGAGCCTCTGGGCAGCTCCATGCTGTTGGCATCTTTTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVLVLHIVLLSSGPR*SLWAAPCCWHLFLH Trigger: ATGGAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACCTGAGGAGAGCAAGACTATGTGTAAGACAAGGACGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 90 bp | ATCACTGCTGACCAGCATCTCGGTCTCCCTTCTCCTGGAAGCAGCTaGTGGCCAGGGCCTGGGATTCATCAACTTAAGTTTTATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ITADQHLGLPSPGSS*WPGPGIHQLKFYLL Trigger: CAGAAGATAAAACTTAAGTTGATGAATCCCAGGCCCTGGCCACCAGCTGCTTCCAGGAGAAGGGAGACCGAGATGCTGGTCAGCAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCATGAGGCGTGCCCCACTGTCTaGATCACTGCTGACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLFYLRCCKESTRQKDHEACPTV*ITADQH Trigger: ATGCTGGTCAGCAGTGATCAAGACAGTGGGGCACGC...CTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS TCA 90 bp | ATCTTCTGGAGCTTTTCTTTAGTTCCCACTCCAAGAGCTTCCTCCTaGACCAGTTTCCAGAAATCCTCGTCGTCGCTCATGTTCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IFWSFSLVPTPRASS*TSFQKSSSSLMFFK Trigger: CTTGAAGAACATGAGCGACGACGAGGATTTCTGGAAACTGGTTCAGGAGGAAGCTCTTGGAGTGGGAACTAAAGAAAAGCTCCAGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 90 bp | GAGGTGGAATACATCCGATACAACCGGCTAAGATACATCTTGCTTTaGGAATCCGTCCTTGTCTTACACATAGTCTTGCTCTCCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVEYIRYNRLRYILL*ESVLVLHIVLLSSG Trigger: ACCTGAGGAGAGCAAGACTATGTGTAAGACAAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCGGTTGTATCGGATGTATTCCACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAAGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCTCTTTGTCCTCCACTaGGGTGTGACACCCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KTSLFYLRCCKESTRQKDLFVLH*GVTPPV Trigger: CACAGGGGGTGTCACACCCAAGTGGAGGACAAAGAG...GTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCTTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGTTCCCTAAATATTAGGGTTGATATTTTTCACCCCTTCTGGAAATTCCTTTGGAAGGGAACCTGGTaGAAGCCTTGGGCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGSLNIRVDIFHPFWKFLWKGTW*KPWAGM Trigger: CATCCCCGCCCAAGGCTTCAACCAGGTTCCCTTCCA...AAGGAATTTCCAGAAGGGGTGAAAAATATCAACCCTAATATTTAGGGAACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCATGAGGTCTTACACATAGTCTaGCTCTCCTCAGGTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLFYLRCCKESTRQKDHEVLHIV*LSSGPR Trigger: TCGAGGACCTGAGGAGAGCAAGACTATGTGTAAGAC...CTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCTCTTCTGACGAGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATTATCGACTTGCTGTCTaGGCCTCCACCACAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CPLLTSLKTATVYLHIINYRLAV*ASTTGW Trigger: CCATCCTGTGGTGGAGGCCAAGACAGCAAGTCGATA...ATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACTCGTCAGAAGAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCATGAGCGGCTAAGATACATCTaGCTTTGGGAATCCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLFYLRCCKESTRQKDHERLRYI*LWESVL Trigger: AAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCG...CTCATGGTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAAGCTTATTTTATTTAAGATGCTGCAAAGAGAGCACCAGGCAGAAGGACCGGCTAAGATACATCTaGCTTTGGGAATCCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTSLFYLRCCKESTRQKDRLRYI*LWESVL Trigger: AAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCG...GTCCTTCTGCCTGGTGCTCTCTTTGCAGCATCTTAAATAAAATAAGCTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS-3UTR CAA 90 bp | CTTATCATAATGCAGACTCAAAGAAAAAGAAAGCTGTCATATCCTGTTTGGACTGTCTTACACATAGTCTaGCTCTCCTCAGGTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LIIMQTQRKRKLSYPVWTVLHIV*LSSGPR Trigger: TCGAGGACCTGAGGAGAGCAAGACTATGTGTAAGAC...AGTCCAAACAGGATATGACAGCTTTCTTTTTCTTTGAGTCTGCATTATGATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | GTCTGGGATCTGTGGTCCTCCTGGCAGGAGCAAGTGTaGCCCTCTCGTGTTCGGAGAGCTTGCTCGTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VWDLWSSWQEQV*PSRVRRACSCH Trigger: GTGGCACGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTGCCAGGAGGACCACAGATCCCAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 72 bp | AGGCGTTGGACCTGGAAGGGAACCTGGTTGAAGCCTTaGGCGGGGATGCTGACCAAGCTTCGGGCTGCGACT | + |
|
Preference number: 6 (lower is better) Translates to: RRWTWKGTWLKP*AGMLTKLRAAT Trigger: AGTCGCAGCCCGAAGCTTGGTCAGCATCCCCGCCCAAGGCTTCAACCAGGTTCCCTTCCAGGTCCAACGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | AGGATGGGTCTGGATCACGTGTGCAAGGGTCAGGGGTaGTGTAGGTCTGGGATCTGTGGTCCTCCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RMGLDHVCKGQG*CRSGICGPPGR Trigger: CCTGCCAGGAGGACCACAGATCCCAGACCTACAGCACCCCTGACCCTTGCACACGTGATCCAGACCCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS CAA 90 bp | AAGACTCGCTGTGTCCCCTCGATGCTTGGGTGGATCCAAGCCAGGTaGGTGCGGGCCCTGTTTTATCCTCTCCTTCTCCGGGCCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KTRCVPSMLGWIQAR*VRALFYPLLLRAIL Trigger: GAGGATGGCCCGGAGAAGGAGAGGATAAAACAGGGCCCGCACCAACCTGGCTTGGATCCACCCAAGCATCGAGGGGACACAGCGAGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CAA 90 bp | GTCCTCCTGGCAGGAGCAAGTGTGCCCCTCTCGTGTTCGGAGAGCTaGCTCGTGCCACACAGGGTCACTTGGTGTCTTCCTGTCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLLAGASVPLSCSES*LVPHRVTWCLPVFR Trigger: CCTGAAGACAGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTGCCAGGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS TCA 72 bp | GGATGGTCCTGTGTTCCCTGGCGTGCCCCACTGTCTTaGTCACTGCTGACCAGCATCTCGGTCTCCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GWSCVPWRAPLS*SLLTSISVSLL Trigger: GAGAAGGGAGACCGAGATGCTGGTCAGCAGTGATCAAGACAGTGGGGCACGCCAGGGAACACAGGACCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | TTCGGGCTGCGACTGTTCCGGCAAGGTCTGCTGTGCTaGCTTCTCTTTGTCCTCCACTTGGGTGTGACACCC | + |
|
Preference number: 6 (lower is better) Translates to: FGLRLFRQGLLC*LLFVLHLGVTP Trigger: GGGTGTCACACCCAAGTGGAGGACAAAGAGAAGGCAGCACAGCAGACCTTGCCGGAACAGTCGCAGCCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | GACCAAGCTTCGGGCTGCGACTGTTCCGGCAAGGTCTaGTGTGCTGCCTTCTCTTTGTCCTCCACTTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DQASGCDCSGKV*CAAFSLSSTWV Trigger: CACCCAAGTGGAGGACAAAGAGAAGGCAGCACAGCAGACCTTGCCGGAACAGTCGCAGCCCGAAGCTTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | CAGGAGCAAGTGTGCCCCTCTCGTGTTCGGAGAGCTTaGTCGTGCCACACAGGGTCACTTGGTGTCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QEQVCPSRVRRA*SCHTGSLGVFL Trigger: CAGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS GCA 72 bp | CTTGGCCTCCACCACAGGATGGGTCTGGATCACGTGTaGAAGGGTCAGGGGTGCTGTAGGTCTGGGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGLHHRMGLDHV*KGQGCCRSGIC Trigger: ACAGATCCCAGACCTACAGCACCCCTGACCCTTGCACACGTGATCCAGACCCATCCTGTGGTGGAGGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | GTCTGGGATCTGTGGTCCTCCTGGCAGGAGCAAGTGTaGCCCTCTCGTGTTCGGAGAGCTTGCTCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VWDLWSSWQEQV*PSRVRRACSFW Trigger: CCAGAAAGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTGCCAGGAGGACCACAGATCCCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS CCA 72 bp | CGACTTGCTGTCTTGGCCTCCACCACAGGATGGGTCTaGATCACGTGTGCAAGGGTCAGGGGTGCTGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLAVLASTTGWV*ITCARVRGAVG Trigger: ACCTACAGCACCCCTGACCCTTGCACACGTGATCCAGACCCATCCTGTGGTGGAGGCCAAGACAGCAAGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | GCAGGAGCAAGTGTGCCCCTCTCGTGTTCGGAGAGCTaGCTCGTGCCACACAGGGTCACTTGGTGTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGASVPLSCSES*LVPHRVTWCLP Trigger: AGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CAA 90 bp | TCAGAAATCGGAGGGCAGGTCCTGCTTGAGGCTGCTGCTCAGGGGTaGGGGAGTCCTCCTCCTCTAGTTCCCTTGGTGGAACATCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SEIGGQVLLEAAAQG*GSPPPLVPLVEHLP Trigger: AGGCAGATGTTCCACCAAGGGAACTAGAGGAGGAGGACTCCCCAACCCCTGAGCAGCAGCCTCAAGCAGGACCTGCCCTCCGATTTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS GCA 72 bp | AGCTTCGGGCTGCGACTGTTCCGGCAAGGTCTGCTGTaGTGCCTTCTCTTTGTCCTCCACTTGGGTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SFGLRLFRQGLL*CLLFVLHLGVT Trigger: TGTCACACCCAAGTGGAGGACAAAGAGAAGGCAGCACAGCAGACCTTGCCGGAACAGTCGCAGCCCGAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 72 bp | GGTCCTCGATGCAGCCTCTGGGCAGCTCCATGCTGTTaGCATCTTTTTCTCCATTCCGTGAGCCGAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPRCSLWAAPCC*HLFLHSVSRAR Trigger: TCTCGCTCGGCTCACGGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 72 bp | CCACACAGGGTCACTTGGTGTCTTCCTGTCTTCAGGTaGGGACGTCTCTGTGGACTTTCTGGGCTCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PHRVTWCLPVFR*GRLCGLSGLWH Trigger: GTGCCAGAGCCCAGAAAGTCCACAGAGACGTCCCCACCTGAAGACAGGAAGACACCAAGTGACCCTGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 72 bp | CAGTATCGACTTGCTGTCTTGGCCTCCACCACAGGATaGGTCTGGATCACGTGTGCAAGGGTCAGGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QYRLAVLASTTG*VWITCARVRGA Trigger: AGCACCCCTGACCCTTGCACACGTGATCCAGACCCATCCTGTGGTGGAGGCCAAGACAGCAAGTCGATACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | AGGTCCTCGATGCAGCCTCTGGGCAGCTCCATGCTGTaGGCATCTTTTTCTCCATTCCGTGAGCCGAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSSMQPLGSSML*ASFSPFREPSE Trigger: CTCGCTCGGCTCACGGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | GTGTTCGGAGAGCTTGCTCGTGCCACACAGGGTCACTaGGTGTCTTCCTGTCTTCAGGTGGGGACGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VFGELARATQGH*VSSCLQVGTSL Trigger: CAGAGACGTCCCCACCTGAAGACAGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAAGCTCTCCGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS GCA 72 bp | TCCTCAGGTCCTCGATGCAGCCTCTGGGCAGCTCCATaGTGTTGGCATCTTTTTCTCCATTCCGTGAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SSGPRCSLWAAP*CWHLFLHSVSR Trigger: TCGGCTCACGGAATGGAGAAAAAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACCTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | CAGCAGGCTTCGGGCCCTGTGCTCAGCATCCATGTCTaGAAAGCGGCCATCTCTTTCCAGCAGTTTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QQASGPVLSIHV*KAAISFQQFSG Trigger: TCCAGAAAACTGCTGGAAAGAGATGGCCGCTTTGCAGACATGGATGCTGAGCACAGGGCCCGAAGCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 72 bp | TGTTCGGAGAGCTTGCTCGTGCCACACAGGGTCACTTaGTGTCTTCCTGTCTTCAGGTGGGGACGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSESLLVPHRVT*CLPVFRWGRLC Trigger: ACAGAGACGTCCCCACCTGAAGACAGGAAGACACCAAGTGACCCTGTGTGGCACGAGCAAGCTCTCCGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CAA 72 bp | GCTCAGGGGTTGGGGAGTCCTCCTCCTCTAGTTCCCTaGGTGGAACATCTGCCTGTGTACGTTCTCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AQGLGSPPPLVP*VEHLPVYVLLV Trigger: CACCAAGAGAACGTACACAGGCAGATGTTCCACCAAGGGAACTAGAGGAGGAGGACTCCCCAACCCCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS GCA 72 bp | GTCTTACACATAGTCTTGCTCTCCTCAGGTCCTCGATaGAGCCTCTGGGCAGCTCCATGCTGTTGGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLHIVLLSSGPR*SLWAAPCCWHL Trigger: AAGATGCCAACAGCATGGAGCTGCCCAGAGGCTGCATCGAGGACCTGAGGAGAGCAAGACTATGTGTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CCA 72 bp | TTGGTGTCTTCCTGTCTTCAGGTGGGGACGTCTCTGTaGACTTTCTGGGCTCTGGCACTTCAGAAATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVSSCLQVGTSL*TFWALALQKSE Trigger: CTCCGATTTCTGAAGTGCCAGAGCCCAGAAAGTCCACAGAGACGTCCCCACCTGAAGACAGGAAGACACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 72 bp | CATCCACATTGTTCACCCAGTATCGACTTGCTGTCTTaGCCTCCACCACAGGATGGGTCTGGATCACGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HPHCSPSIDLLS*PPPQDGSGSRV Trigger: CACACGTGATCCAGACCCATCCTGTGGTGGAGGCCAAGACAGCAAGTCGATACTGGGTGAACAATGTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | GCAGGAGCAAGTGTGCCCCTCTCGTGTTCGGAGAGCTaGCTCTTTCTGGAGAATTCCATGTTAGCAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGASVPLSCSES*LFLENSMLARE Trigger: CTCCCTTGCTAACATGGAATTCTCCAGAAAGAGCAAGCTCTCCGAACACGAGAGGGGCACACTTGCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234809.2 |
||
| CDS CCA 72 bp | CAGCATCTCGGTCTCCCTTCTCCTGGAAGCAGCTGGTaGCCAGGGCCTGGGATTCATCAACTTAAGTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: QHLGLPSPGSSW*PGPGIHQLKFY Trigger: ATAAAACTTAAGTTGATGAATCCCAGGCCCTGGCCACCAGCTGCTTCCAGGAGAAGGGAGACCGAGATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | TCATCCACATTGTTCACCCAGTATCGACTTGCTGTCTaGGCCTCCACCACAGGATGGGTCTGGATCACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSTLFTQYRLAV*ASTTGWVWITC Trigger: ACACGTGATCCAGACCCATCCTGTGGTGGAGGCCAAGACAGCAAGTCGATACTGGGTGAACAATGTGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 ENSMUST00000234809.2 |
||
| CDS CCA 72 bp | CCTTGGTGGAACATCTGCCTGTGTACGTTCTCTTGGTaGAACATCTGCCTGTGTACGTTCTCTTGGGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: PWWNICLCTFSW*NICLCTFSWDH Trigger: ATGGTCCCAAGAGAACGTACACAGGCAGATGTTCCACCAAGAGAACGTACACAGGCAGATGTTCCACCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CCA 72 bp | TTCCCTTGGTGGAACATCTGCCTGTGTACGTTCTCTTaGTGGAACATCTGCCTGTGTACGTTCTCTTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPWWNICLCTFS*WNICLCTFSWD Trigger: GTCCCAAGAGAACGTACACAGGCAGATGTTCCACCAAGAGAACGTACACAGGCAGATGTTCCACCAAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CAA 90 bp | GTCGTCGCTCATGTTCTTCAAGATCCCACATTTGGTCAGCTCGTTTaGCAACCCTATAATCAGGTAGGCGTTGGACCTGGAAGGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: VVAHVLQDPTFGQLV*QPYNQVGVGPGREP Trigger: AGGTTCCCTTCCAGGTCCAACGCCTACCTGATTATAGGGTTGCAAAACGAGCTGACCAAATGTGGGATCTTGAAGAACATGAGCGACGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS TCA 72 bp | AGCTTTTCTTTAGTTCCCACTCCAAGAGCTTCCTCCTaGACCAGTTTCCAGAAATCCTCGTCGTCGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SFSLVPTPRASS*TSFQKSSSSLM Trigger: CATGAGCGACGACGAGGATTTCTGGAAACTGGTTCAGGAGGAAGCTCTTGGAGTGGGAACTAAAGAAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS GCA 72 bp | AACATCTGCCTGTGTACGTTCTCTTGGTGGAACATCTaGCTGTGTACGTTCTCTTGGGACCATGTAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NICLCTFSWWNI*LCTFSWDHVIQ Trigger: CTGGATTACATGGTCCCAAGAGAACGTACACAGGCAGATGTTCCACCAAGAGAACGTACACAGGCAGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000169635.3 |
||
| CDS CAA 90 bp | GGAGGTGGAATACATCCGATACAACCGGCTAAGATACATCTTGCTTaGGGAATCCGTCCTTGTCTTACACATAGTCTTGCTCTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGGIHPIQPAKIHLA*GIRPCLTHSLALLR Trigger: CCTGAGGAGAGCAAGACTATGTGTAAGACAAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCGGTTGTATCGGATGTATTCCACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CAA 90 bp | GCAAGGGAGGTGGAATACATCCGATACAACCGGCTAAGATACATCTaGCTTTGGGAATCCGTCCTTGTCTTACACATAGTCTTGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AREVEYIRYNRLRYI*LWESVLVLHIVLLS Trigger: GGAGAGCAAGACTATGTGTAAGACAAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCGGTTGTATCGGATGTATTCCACCTCCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | CATGTTCTTCAAGATCCCACATTTGGTCAGCTCGTTTaGCAACCCTATAATCAGGTAGGCGTTGGACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HVLQDPTFGQLV*QPYNQVGVGPG Trigger: TCCAGGTCCAACGCCTACCTGATTATAGGGTTGCAAAACGAGCTGACCAAATGTGGGATCTTGAAGAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||
| CDS CAA 72 bp | GTGGAATACATCCGATACAACCGGCTAAGATACATCTaGCTTTGGGAATCCGTCCTTGTCTTACACATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VEYIRYNRLRYI*LWESVLVLHIV Trigger: GACTATGTGTAAGACAAGGACGGATTCCCAAAGCAAGATGTATCTTAGCCGGTTGTATCGGATGTATTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163578.8 ENSMUST00000234809.2 |
||