Pregenerated sensors for SZRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040842Ensembl transcript IDs: ENSMUST00000102487.4, ENSMUST00000148204.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCAGGTGCACTGTGGGCGGGGCCTTCTTTGGCCAGACTGAGATaGGAGAGCCACTCTTGTGAGCTCTCGACGTGCAGATGCCGCCCG | + |
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Preference number: 1 (lower is better) Translates to: EAGALWAGPSLARLR*ESHSCELSTCRCRP Trigger: CGGGCGGCATCTGCACGTCGAGAGCTCACAAGAGTGGCTCTCCCATCTCAGTCTGGCCAAAGAAGGCCCCGCCCACAGTGCACCTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR TCA 90 bp | GTGGGGAGGCAGGTGCACTGTGGGCGGGGCCTTCTTTGGCCAGACTaGGATGGGAGAGCCACTCTTGTGAGCTCTCGACGTGCAGATGCC | + |
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Preference number: 1 (lower is better) Translates to: VGRQVHCGRGLLWPD*DGRATLVSSRRADA Trigger: GGCATCTGCACGTCGAGAGCTCACAAGAGTGGCTCTCCCATCTCAGTCTGGCCAAAGAAGGCCCCGCCCACAGTGCACCTGCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 90 bp | AGAGCCACTCTTGTGAGCTCTCGACGTGCAGATGCCGCCCGCCCTTaGCTTCCACTAGAGGGGACCAGGCAAGCAGGGTTTCTGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: RATLVSSRRADAARP*LPLEGTRQAGFLHP Trigger: AGGGTGCAGAAACCCTGCTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGGCGGGCGGCATCTGCACGTCGAGAGCTCACAAGAGTGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 90 bp | CAACTTAGCTGGGACTTAGCTGGAGGAAGGCGATTTAGGCACAGATaGTCATCTCTGGGGACTTCCGAGCCCGGCCTCTCTTCTGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: QLSWDLAGGRRFRHR*SSLGTSEPGLSSGR Trigger: CCGCCCAGAAGAGAGGCCGGGCTCGGAAGTCCCCAGAGATGAGCATCTGTGCCTAAATCGCCTTCCTCCAGCTAAGTCCCAGCTAAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 90 bp | CTGGACAAGTGTCCTCACTGCCTTTCTGAGCCCAGAGTCACTCTGTaGCCTCCTTTAGAAGCAGCGAACCTGGCTGGTAGGGAGCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LDKCPHCLSEPRVTL*PPLEAANLAGREPA Trigger: GGCTGGCTCCCTACCAGCCAGGTTCGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGGACACTTGTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 90 bp | GCAGCCGAGGCCTCCGAGGAACCTTTTGGCCATCTGCCTTTGCAATaGACACTCTGTCTTTCCCCGGCTGCTCCAGTCCCACTCATTTCA | + |
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Preference number: 1 (lower is better) Translates to: AAEASEEPFGHLPLQ*TLCLSPAAPVPLIS Trigger: TGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGAGGCCTCGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 90 bp | ACCACTCCAGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTaGGCTTGTGCCGACAGCAAACACTGGACAAGTGTCCTCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: TTPGKGLEFWSQTLS*ACADSKHWTSVLTA Trigger: GGCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 90 bp | GAAAGGGCAGTCTGTCCTCCAACCAAAACCACTAGCCTCTGTGGGTaGGCCCTAGACTCTGAGCTAGCAGCCAAGTTCCTCCCTACCCTG | + |
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Preference number: 1 (lower is better) Translates to: ERAVCPPTKTTSLCG*ALDSELAAKFLPTL Trigger: CAGGGTAGGGAGGAACTTGGCTGCTAGCTCAGAGTCTAGGGCCCACCCACAGAGGCTAGTGGTTTTGGTTGGAGGACAGACTGCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 90 bp | AGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTGGGCTTGTaGCGACAGCAAACACTGGACAAGTGTCCTCACTGCCTTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RQRPGVLEPDSLLGL*RQQTLDKCPHCLSE Trigger: CTCAGAAAGGCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 90 bp | CTCTTGGGCTTGTGCCGACAGCAAACACTGGACAAGTGTCCTCACTaGCTTTCTGAGCCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LLGLCRQQTLDKCPH*LSEPRVTLCPPLEA Trigger: TGCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 90 bp | TTCTGGAGCCAGACTCTCTCTTGGGCTTGTGCCGACAGCAAACACTaGACAAGTGTCCTCACTGCCTTTCTGAGCCCAGAGTCACTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FWSQTLSWACADSKH*TSVLTAFLSPESLC Trigger: ACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 90 bp | TTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGCTaGTCCAGTCCCACTCATTTCACCAGGCAACGTTCCAGTACAGTC | + |
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Preference number: 1 (lower is better) Translates to: FWPSAFAMHTLSFPG*SSPTHFTRQRSSTV Trigger: GACTGTACTGGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGCACCTAGTGGGACACAGCCGCCCTCTCAAGCCTCTCCCACCGAGAGCCTCCAGGAGGCGGTGGTaGCAGCAGCGGCGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: REHLVGHSRPLKPLPPRASRRRW*QQRRPF Trigger: GAAAGGACGCCGCTGCTGCCACCACCGCCTCCTGGA...GGCTCTCGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCACTAGGTGCTCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 90 bp | GCTGGTGGGAGTGGGGAGGCAGGTGCACTGTGGGCGGGGCCTTCTTaGGCCAGACTGAGATGGGAGAGCCACTCTTGTGAGCTCTCGACG | + |
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Preference number: 2 (lower is better) Translates to: AGGSGEAGALWAGPS*ARLRWESHSCELST Trigger: CGTCGAGAGCTCACAAGAGTGGCTCTCCCATCTCAGTCTGGCCAAAGAAGGCCCCGCCCACAGTGCACCTGCCTCCCCACTCCCACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 90 bp | GAGAGCCACTCTTGTGAGCTCTCGACGTGCAGATGCCGCCCGCCCTaGGCTTCCACTAGAGGGGACCAGGCAAGCAGGGTTTCTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: ESHSCELSTCRCRPP*ASTRGDQASRVSAP Trigger: GGGTGCAGAAACCCTGCTTGCCTGGTCCCCTCTAGTGGAAGCCAAGGGCGGGCGGCATCTGCACGTCGAGAGCTCACAAGAGTGGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 90 bp | AGCAAACCTCCAGGCTCGGGGACAGAGATGGCCTTCATGCCAGCCTaGTTCTGCTCAGGGAGAGAAGGGGCAGCCGAGGCCTCCGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SKPPGSGTEMAFMPA*FCSGREGAAEASEE Trigger: TTCCTCGGAGGCCTCGGCTGCCCCTTCTCTCCCTGAGCAGAACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGAGCCTGGAGGTTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTGGGCTTGTGCCTCCAGGAGGCGGTGGTaGCAGCAGCGGCGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TPGKGLEFWSQTLSWACASRRRW*QQRRPF Trigger: GAAAGGACGCCGCTGCTGCCACCACCGCCTCCTGGA...GGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGCAAACCTCCAGGCTCGGGGACAGAGATGGCCTTCATGCCAGCCTTGTTCCATCCAGGAGGCGGTaGTGGCAGCAGCGGCGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PKQTSRLGDRDGLHASLVPSRRR*WQQRRP Trigger: AGGACGCCGCTGCTGCCACCACCGCCTCCTGGATGG...AACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGAGCCTGGAGGTTTGCTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGCACCTAGTGGGACACAGCCGCCCTCTCAAGCCTCTCCCACCGAGAGCCGCTCGGGGACAGAGATaGCCTTCATGCCAGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: REHLVGHSRPLKPLPPRAARGQR*PSCQPC Trigger: ACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGAGC...GGCTCTCGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCACTAGGTGCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTCCAGTACAGTCTCTGAACGGAGCCAGCCCACCCTaGGGGGTGTGGGAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: AAPVPLISPGNVPVQSLNGASPP*GVWEGE Trigger: TTCCCCTTCCCACACCCCTCAGGGTGGGCTGGCTCC...GTTCAGAGACTGTACTGGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGCCATCCAGGAGGCGGTaGTGGCAGCAGCGGCGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SEEPFGHLPLQCTLCLSPPSRRR*WQQRRP Trigger: AGGACGCCGCTGCTGCCACCACCGCCTCCTGGATGG...CGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 90 bp | GACCACTCCAGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTaGGGCTTGTGCCGACAGCAAACACTGGACAAGTGTCCTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: DHSRQRPGVLEPDSL*GLCRQQTLDKCPHC Trigger: GCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAGTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTGGGCTTGTGCCCTCCCCCAGGCTCTCTaGGCTATCTCTAGGCAACTT | + |
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Preference number: 2 (lower is better) Translates to: TPGKGLEFWSQTLSWACALPQAL*AISRQL Trigger: AAGTTGCCTAGAGATAGCTCAGAGAGCCTGGGGGAG...GGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCAGCGAACCTGGCTGGTAGGGAGATGGCGACATGCACTTaGGGTGGGTGGGGAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PRVTLCPPLEAANLAGREMATCT*GGWGSS Trigger: AGAACTTCCCCACCCACCCCAAGTGCATGTCGCCAT...CTCCCTACCAGCCAGGTTCGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTCCAGTACAGTCTTCCTCACTGCCTTTCTaGGCCCAGAGTCACTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPAAPVPLISPGNVPVQSSSLPF*AQSHSV Trigger: CACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGGA...AGACTGTACTGGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGCACCTAGTGGGACACAGCCGCCCTCTCAAGCCTCTCCCACCGAGAGCCTTGGCCATCTGCCTTTaGAATGCACACTCTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: REHLVGHSRPLKPLPPRALAICL*NAHSVF Trigger: AAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAA...GGCTCTCGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCACTAGGTGCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTCCAGTACAGTCTCTCACAATACTAACATaGGGTCAGCCCCTCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SPAAPVPLISPGNVPVQSLTILT*GQPLPQ Trigger: CTGGGGGAGGGGCTGACCCCATGTTAGTATTGTGAG...AGACTGTACTGGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACTGCCTTTCTGAGCCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCAGCGTCAGGTTATTCCCTCTaGTCAAGTCCAGCCGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PHCLSEPRVTLCPPLEAASGYSL*SSPAVC Trigger: GCAGACGGCTGGACTTGAGCAGAGGGAATAACCTGA...CGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGCCCAGAGTCACTCTGTaGCCTCCTTTAGAAGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: PRNLLAICLCNAHSVFPRPRVTL*PPLEAA Trigger: CGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGG...CCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CACACTCTGTCTTTCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTGCACTTGGGGTGGGTaGGGAAGTTCTCATTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HTLSFPGCSSPTHFTRQRCTWGG*GSSHLW Trigger: CCACAAATGAGAACTTCCCCACCCACCCCAAGTGCA...ACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CACACTCTGTCTTTCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTAAAGGCCTGGAGTTCTaGAGCCAGACTCTCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: HTLSFPGCSSPTHFTRQRKGLEF*SQTLSW Trigger: CCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTT...ACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCATTGGAAGAGATCACAAAGCCAGAGAGCACCTAGTGGGACACAGCCGCCTCCAGGCAAAGGCCTaGAGTTCTGGAGCCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: KCIGRDHKAREHLVGHSRLQAKA*SSGARL Trigger: GAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAG...GCGGCTGTGTCCCACTAGGTGCTCTCTGGCTTTGTGATCTCTTCCAATGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCATTGGAAGAGATCACAAAGCCAGAGAGCACCTAGTGGGACACAGCCGCCTCCCCCAGGCTCTCTaGGCTATCTCTAGGCAACTT | + |
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Preference number: 2 (lower is better) Translates to: KCIGRDHKAREHLVGHSRLPQAL*AISRQL Trigger: AAGTTGCCTAGAGATAGCTCAGAGAGCCTGGGGGAG...GCGGCTGTGTCCCACTAGGTGCTCTCTGGCTTTGTGATCTCTTCCAATGCACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTCTTGCTGGAAGGGACAGGCCTCTCTACTCTGACCACTCCAGGCAAAGGGACATGCACTTGGGGTaGGTGGGGAAGTTCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: SSLAGRDRPLYSDHSRQRDMHLG*VGKFSF Trigger: AAATGAGAACTTCCCCACCCACCCCAAGTGCATGTC...CCTTTGCCTGGAGTGGTCAGAGTAGAGAGGCCTGTCCCTTCCAGCAAGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCACTGCCTTTCTGAGCCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCAGCGGACATGCACTTGGGGTaGGTGGGGAAGTTCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: PHCLSEPRVTLCPPLEAADMHLG*VGKFSF Trigger: AAATGAGAACTTCCCCACCCACCCCAAGTGCATGTC...CGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCATTGGAAGAGATCACAAAGCCAGAGAGCACCTAGTGGGACACAGCCGCATGGCGACATGCACTTaGGGTGGGTGGGGAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: KCIGRDHKAREHLVGHSRMATCT*GGWGSS Trigger: AGAACTTCCCCACCCACCCCAAGTGCATGTCGCCAT...GCGGCTGTGTCCCACTAGGTGCTCTCTGGCTTTGTGATCTCTTCCAATGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCACTGCCTTTCTGAGCCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCAGCGTCTAGGCAACTTAGCTaGGACTTAGCTGGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PHCLSEPRVTLCPPLEAASRQLS*DLAGGR Trigger: CCTTCCTCCAGCTAAGTCCCAGCTAAGTTGCCTAGA...CGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTCCAGTACAGTCTCTGAACTCAGGTTATTCCCTCTaGTCAAGTCCAGCCGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AAPVPLISPGNVPVQSLNSGYSL*SSPAVC Trigger: GCAGACGGCTGGACTTGAGCAGAGGGAATAACCTGA...GTTCAGAGACTGTACTGGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGCGATTTAGGCACAGATaGTCATCTCTGGGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: PRNLLAICLCNAHSVFPRRFRHR*SSLGTS Trigger: GGAAGTCCCCAGAGATGAGCATCTGTGCCTAAATCG...CCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGTCTAGGCAACTTAGCTaGGACTTAGCTGGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRNLLAICLCNAHSVFPRSRQLS*DLAGGR Trigger: CCTTCCTCCAGCTAAGTCCCAGCTAAGTTGCCTAGA...CCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGAATGGAACTTTTAAGTaGTGGCGACATGCACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SEEPFGHLPLQCTLCLSPNGTFK*WRHALG Trigger: CCCAAGTGCATGTCGCCATCACTTAAAAGTTCCATT...CGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTCCAGTACAGTCTCTGAACAATGGAACTTTTAAGTaGTGGCGACATGCACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: AAPVPLISPGNVPVQSLNNGTFK*WRHALG Trigger: CCCAAGTGCATGTCGCCATCACTTAAAAGTTCCATT...GTTCAGAGACTGTACTGGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCATTGGAAGAGATCACAAAGCCAGAGAGCACCTAGTGGGACACAGCCGCAACCTTTTGGCCATCTaGCTTTGCAATGCACACTCT | + |
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Preference number: 2 (lower is better) Translates to: KCIGRDHKAREHLVGHSRNLLAI*LCNAHS Trigger: AGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTT...GCGGCTGTGTCCCACTAGGTGCTCTCTGGCTTTGTGATCTCTTCCAATGCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 72 bp | CCCACCCCGCCCACTCCCACTCCCACACCCGAGTGCTaGTCAGGAGAGTGCTGGTCGGCTGTCAGGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PTPPTPTPTPEC*SGECWSAVRLA Trigger: GGCCAGCCTGACAGCCGACCAGCACTCTCCTGACCAGCACTCGGGTGTGGGAGTGGGAGTGGGCGGGGTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR TCA 72 bp | ACCCTGGGGGTGGCCGGCCCTCCTGCTGAGGCTCTGTaGGGCTCACTCACAGATGGCCCCTGGTTTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLGVAGPPAEAL*GSLTDGPWFQA Trigger: TGCCTGAAACCAGGGGCCATCTGTGAGTGAGCCTCACAGAGCCTCAGCAGGAGGGCCGGCCACCCCCAGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR TCA 72 bp | GCTATAGCGCACAAGCCAGAGGAACCGAAGGCGGTGTaGTCCCTGGCTGCCCTAATCCCACCCCACCCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: AIAHKPEEPKAV*SLAALIPPHPA Trigger: GGCGGGGTGGGGTGGGATTAGGGCAGCCAGGGATCACACCGCCTTCGGTTCCTCTGGCTTGTGCGCTATAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 72 bp | TCGGGGACAGAGATGGCCTTCATGCCAGCCTTGTTCTaGTCAGGGAGAGAAGGGGCAGCCGAGGCCTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGTEMAFMPALF*SGREGAAEASE Trigger: CTCGGAGGCCTCGGCTGCCCCTTCTCTCCCTGAGCAGAACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 72 bp | TGGGAGAGCCACTCTTGTGAGCTCTCGACGTGCAGATaGCGCCCGCCCTTGGCTTCCACTAGAGGGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: WESHSCELSTCR*RPPLASTRGDQ Trigger: CTGGTCCCCTCTAGTGGAAGCCAAGGGCGGGCGGCATCTGCACGTCGAGAGCTCACAAGAGTGGCTCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 72 bp | CTGGAGGAAGGCGATTTAGGCACAGATGCTCATCTCTaGGGACTTCCGAGCCCGGCCTCTCTTCTGGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LEEGDLGTDAHL*GLPSPASLLGG Trigger: GCCGCCCAGAAGAGAGGCCGGGCTCGGAAGTCCCCAGAGATGAGCATCTGTGCCTAAATCGCCTTCCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGCACCTAGTGGGACACAGCCGCCCTCTCAAGCCTCTCCCACCGAGAGCCTCCCTTTCTATTGACTaGGGACAGCCCTTGTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: REHLVGHSRPLKPLPPRASLSID*GQPLST Trigger: TGTTGACAAGGGCTGTCCCAAGTCAATAGAAAGGGA...GGCTCTCGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCACTAGGTGCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR TCA 72 bp | ATCCAGTCTTGCTGGAAGGGACAGGCCTCTCTACTCTaGCCACTCCAGGCAAAGGCCTGGAGTTCTGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IQSCWKGQASLL*PLQAKAWSSGA Trigger: GGCTCCAGAACTCCAGGCCTTTGCCTGGAGTGGTCAGAGTAGAGAGGCCTGTCCCTTCCAGCAAGACTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 72 bp | TGGGACTTAGCTGGAGGAAGGCGATTTAGGCACAGATaGTCATCTCTGGGGACTTCCGAGCCCGGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WDLAGGRRFRHR*SSLGTSEPGLS Trigger: AGAGAGGCCGGGCTCGGAAGTCCCCAGAGATGAGCATCTGTGCCTAAATCGCCTTCCTCCAGCTAAGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 72 bp | CCTGGAGTTCTGGAGCCAGACTCTCTCTTGGGCTTGTaGCGACAGCAAACACTGGACAAGTGTCCTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGVLEPDSLLGL*RQQTLDKCPHC Trigger: GCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 72 bp | GGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTaGGCTTGTGCCGACAGCAAACACTGGACAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GKGLEFWSQTLS*ACADSKHWTSV Trigger: GACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 72 bp | GTCTGTCCTCCAACCAAAACCACTAGCCTCTGTGGGTaGGCCCTAGACTCTGAGCTAGCAGCCAAGTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VCPPTKTTSLCG*ALDSELAAKFL Trigger: GAGGAACTTGGCTGCTAGCTCAGAGTCTAGGGCCCACCCACAGAGGCTAGTGGTTTTGGTTGGAGGACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 72 bp | TTGTGCCGACAGCAAACACTGGACAAGTGTCCTCACTaGCTTTCTGAGCCCAGAGTCACTCTGTGCCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LCRQQTLDKCPH*LSEPRVTLCPP Trigger: AGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR GCA 72 bp | TCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGCTaGTCCAGTCCCACTCATTTCACCAGGCAACGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SAFAMHTLSFPG*SSPTHFTRQRS Trigger: GGAACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CCA 72 bp | CAGACTCTCTCTTGGGCTTGTGCCGACAGCAAACACTaGACAAGTGTCCTCACTGCCTTTCTGAGCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QTLSWACADSKH*TSVLTAFLSPE Trigger: CTCTGGGCTCAGAAAGGCAGTGAGGACACTTGTCCAGTGTTTGCTGTCGGCACAAGCCCAAGAGAGAGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGCAAACCTCCAGGCTCGGGGACAGAGATGGCCTTCATGCCAGCCTTGTTTCCCTTTCTATTGACTaGGGACAGCCCTTGTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PKQTSRLGDRDGLHASLVSLSID*GQPLST Trigger: TGTTGACAAGGGCTGTCCCAAGTCAATAGAAAGGGA...AACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGAGCCTGGAGGTTTGCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGCAAACCTCCAGGCTCGGGGACAGAGATGGCCTTCATGCCAGCCTTGTTTTTGGCCATCTGCCTTaGCAATGCACACTCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PKQTSRLGDRDGLHASLVFGHLP*QCTLCL Trigger: AAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAA...AACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGAGCCTGGAGGTTTGCTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR TCA 72 bp | ACAGCAAACACTGGACAAGTGTCCTCACTGCCTTTCTaGGCCCAGAGTCACTCTGTGCCCTCCTTTAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TANTGQVSSLPF*AQSHSVPSFRS Trigger: GCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGGACACTTGTCCAGTGTTTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGCACCTAGTGGGACACAGCCGCCCTCTCAAGCCTCTCCCACCGAGAGCCCAGGAAGGGCTGGCCTaGTGGTGGAGTTGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: REHLVGHSRPLKPLPPRAQEGLA*WWSWGC Trigger: GCAGCCCCAACTCCACCAGCAGGCCAGCCCTTCCTG...GGCTCTCGGTGGGAGAGGCTTGAGAGGGCGGCTGTGTCCCACTAGGTGCTCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 72 bp | CCAGGCTCGGGGACAGAGATGGCCTTCATGCCAGCCTaGTTCTGCTCAGGGAGAGAAGGGGCAGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSGTEMAFMPA*FCSGREGAAEA Trigger: GGCCTCGGCTGCCCCTTCTCTCCCTGAGCAGAACAAGGCTGGCATGAAGGCCATCTCTGTCCCCGAGCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR GCA 90 bp | ACTCCAGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTGGGCTTGTGCCCAGGAAGGGCTGGCCTaGTGGTGGAGTTGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGKGLEFWSQTLSWACAQEGLA*WWSWGC Trigger: GCAGCCCCAACTCCACCAGCAGGCCAGCCCTTCCTG...GGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 72 bp | AGTGGGGAGGCAGGTGCACTGTGGGCGGGGCCTTCTTaGGCCAGACTGAGATGGGAGAGCCACTCTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEAGALWAGPS*ARLRWESHSCE Trigger: CTCACAAGAGTGGCTCTCCCATCTCAGTCTGGCCAAAGAAGGCCCCGCCCACAGTGCACCTGCCTCCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| 3UTR CAA 72 bp | GCCGAGGCCTCCGAGGAACCTTTTGGCCATCTGCCTTaGCAATGCACACTCTGTCTTTCCCCGGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEASEEPFGHLP*QCTLCLSPAAP Trigger: TGGAGCAGCCGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGAGGCCTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR TCA 90 bp | CACACTCTGTCTTTCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTGACCCAACGGCTGTCTaGTCACATTGCTGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLSFPGCSSPTHFTRQRDPTAV*SHCWAA Trigger: GGCAGCCCAGCAATGTGATCAGACAGCCGTTGGGTC...ACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR CCA 90 bp | TCCAGTCTTGCTGGAAGGGACAGGCCTCTCTACTCTGACCACTCCAGGCAAAGGGTGGAGGGGGCCCCGTaGGAAGGCTATCGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLAGRDRPLYSDHSRQRVEGAP*EGYRLE Trigger: TTCAAGACGATAGCCTTCCCACGGGGCCCCCTCCAC...CCTTTGCCTGGAGTGGTCAGAGTAGAGAGGCCTGTCCCTTCCAGCAAGACTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR TCA 90 bp | TCCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGACCCAACGGCTGTCTaGTCACATTGCTGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEEPFGHLPLQCTLCLSPDPTAV*SHCWAA Trigger: GGCAGCCCAGCAATGTGATCAGACAGCCGTTGGGTC...CGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR GCA 90 bp | CACACTCTGTCTTTCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTAGGATGGGTTTCTCCTaGTCCTCTTCAGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTLSFPGCSSPTHFTRQRRMGFS*SSSGLA Trigger: TGCCAGCCCTGAAGAGGAGCAGGAGAAACCCATCCT...ACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR GCA 90 bp | CCTCACTGCCTTTCTGAGCCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCAGCGAGGATGGGTTTCTCCTaGTCCTCTTCAGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHCLSEPRVTLCPPLEAARMGFS*SSSGLA Trigger: TGCCAGCCCTGAAGAGGAGCAGGAGAAACCCATCCT...CGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGGCTCAGAAAGGCAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR CCA 90 bp | AAGTGCATTGGAAGAGATCACAAAGCCAGAGAGCACCTAGTGGGACACAGCCGCGTGGAGGGGGCCCCGTaGGAAGGCTATCGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCIGRDHKAREHLVGHSRVEGAP*EGYRLE Trigger: TTCAAGACGATAGCCTTCCCACGGGGCCCCCTCCAC...GCGGCTGTGTCCCACTAGGTGCTCTCTGGCTTTGTGATCTCTTCCAATGCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR CCA 90 bp | CCCAGAGTCACTCTGTGCCCTCCTTTAGAAGCAGCGAACCTGGCTGGTAGGGAGTTGGGAGATCCTGGTTaGCCTGTCCAGGATGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVTLCPPLEAANLAGRELGDPG*PVQDGF Trigger: AAACCCATCCTGGACAGGCCAACCAGGATCTCCCAA...CTCCCTACCAGCCAGGTTCGCTGCTTCTAAAGGAGGGCACAGAGTGACTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR CCA 90 bp | CACACTCTGTCTTTCCCCGGCTGCTCCAGTCCCACTCATTTCACCAGGCAACGTTTGGGAGATCCTGGTTaGCCTGTCCAGGATGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLSFPGCSSPTHFTRQRLGDPG*PVQDGF Trigger: AAACCCATCCTGGACAGGCCAACCAGGATCTCCCAA...ACGTTGCCTGGTGAAATGAGTGGGACTGGAGCAGCCGGGGAAAGACAGAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGCAAAGGCCTGGAGTTCTGGAGCCAGACTCTCTCTTGGGCTTGTGCCCTTTGGGAGGAGATTTaGATTTCCTGCTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGKGLEFWSQTLSWACALWEEI*ISCSLF Trigger: AAAAAGAGAGCAGGAAATCCAAATCTCCTCCCAAAG...GGCACAAGCCCAAGAGAGAGTCTGGCTCCAGAACTCCAGGCCTTTGCCTGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102487.4 |
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| CDS-3UTR CCA 90 bp | TCCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGCTTTGGGAGGAGATTTaGATTTCCTCTCTTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SEEPFGHLPLQCTLCLSPLWEEI*ISSLFV Trigger: CACAAAAAGAGAGGAAATCCAAATCTCCTCCCAAAG...CGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148204.8 |
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| CDS-3UTR CAA 90 bp | AGTCCAGCCGTCTGCCACAGCAGTGCGACCCATGGCAGACCATCCAGGAGGCGGGTTGGGAGATCCTGGTaGGCCTGTCCAGGATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPAVCHSSATHGRPSRRRVGRSW*ACPGWV Trigger: AACCCATCCTGGACAGGCCAACCAGGATCTCCCAAC...CCGCCTCCTGGATGGTCTGCCATGGGTCGCACTGCTGTGGCAGACGGCTGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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| CDS-3UTR CAA 90 bp | TCCGAGGAACCTTTTGGCCATCTGCCTTTGCAATGCACACTCTGTCTTTCCCCGGTTGGGAGATCCTGGTaGGCCTGTCCAGGATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEEPFGHLPLQCTLCLSPVGRSW*ACPGWV Trigger: AACCCATCCTGGACAGGCCAACCAGGATCTCCCAAC...CGGGGAAAGACAGAGTGTGCATTGCAAAGGCAGATGGCCAAAAGGTTCCTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102487.4 ENSMUST00000148204.8 |
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