Pregenerated sensors for SYTL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054453Ensembl transcript IDs: ENSMUST00000067529.9, ENSMUST00000086165.4
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTGCCATCAAGTCCGGTGACTCGACACTCACTGCATACCCTGAGTaGGCAGGCTTGGCATGGATCTCCCCGGTCAAAGATGAGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: AAIKSGDSTLTAYPE*AGLAWISPVKDEAK Trigger: CTTGGCCTCATCTTTGACCGGGGAGATCCATGCCAAGCCTGCTCACTCAGGGTATGCAGTGAGTGTCGAGTCACCGGACTTGATGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | GTGCCAGACACCGCTATGGAGGGTGTACCGGATGTGTTTCTGCGGTaGCTCTTTGTGAGCTCTTCACAGGTGTTTTCAATGGTAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: VPDTAMEGVPDVFLR*LFVSSSQVFSMVAK Trigger: TTTGGCTACCATTGAAAACACCTGTGAAGAGCTCACAAAGAGTCACCGCAGAAACACATCCGGTACACCCTCCATAGCGGTGTCTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | TTCTCTGCTGTTGATGGAGGTCACACTATGAGCACTTGGGACTGGTaGCCTCTGAGTAACTGGGATTCCACCGTTGCTGTAGCTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: FSAVDGGHTMSTWDW*PLSNWDSTVAVAAF Trigger: AAAAGCAGCTACAGCAACGGTGGAATCCCAGTTACTCAGAGGTCACCAGTCCCAAGTGCTCATAGTGTGACCTCCATCAACAGCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 90 bp | AGTTCCATGAGTCAAAAGCAATCTCCACCTCTCCCAGGAAACTGTTaGGTCCAAACCGATCATAGTGCCAGACTGAGAGCTGCAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SSMSQKQSPPLPGNC*VQTDHSARLRAAEF Trigger: GAACTCTGCAGCTCTCAGTCTGGCACTATGATCGGTTTGGACGCAACAGTTTCCTGGGAGAGGTGGAGATTGCTTTTGACTCATGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | CGGCTGAAGCACAAACCACTCATCACATGGATTTTCAAAGTTCCATaGGTCAAAAGCAATCTCCACCTCTCCCAGGAAACTGTTGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: RLKHKPLITWIFKVP*VKSNLHLSQETVAS Trigger: GGACGCAACAGTTTCCTGGGAGAGGTGGAGATTGCTTTTGACTCATGGAACTTTGAAAATCCATGTGATGAGTGGTTTGTGCTTCAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | CTCCTAGAAAGACGTTGCTGGAAAAGGCCTCTTTGTCCCAGATGGTaGGTTCTAGGCAAGCATTCTTTATATCCTGAGGATACAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LLERRCWKRPLCPRW*VLGKHSLYPEDTGH Trigger: GTGGCCTGTATCCTCAGGATATAAAGAATGCTTGCCTAGAACTCACCATCTGGGACAAAGAGGCCTTTTCCAGCAACGTCTTTCTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | TCTTTGTCCCAGATGGTGAGTTCTAGGCAAGCATTCTTTATATCCTaGGGATACAGGCCACTGAATATGAACGTATGGTTCCACTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLSQMVSSRQAFFIS*GYRPLNMNVWFHSG Trigger: TCCTGAGTGGAACCATACGTTCATATTCAGTGGCCTGTATCCTCAGGATATAAAGAATGCTTGCCTAGAACTCACCATCTGGGACAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | TCCCGTTTCACTGTAAACACTCATCATGCTGTTAAGGCTAGTAGTTaGCAATCCACTTGCCAGACTGTGGGTATTTGCAGAAAACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SRFTVNTHHAVKASS*QSTCQTVGICRKPG Trigger: TCCAGGTTTTCTGCAAATACCCACAGTCTGGCAAGTGGATTGTCAACTACTAGCCTTAACAGCATGATGAGTGTTTACAGTGAAACGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086165.4 |
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| CDS GCA 90 bp | CTTAAGATGGACTGTCGAACGACATCAGTGCCCAGAACATTGACTTaGTTGAAACGCTTTGCCTTTTCTTCCAAGAACCATTCTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: LKMDCRTTSVPRTLT*LKRFAFSSKNHSPL Trigger: AAGTGGAGAATGGTTCTTGGAAGAAAAGGCAAAGCGTTTCAAGCAAGTCAATGTTCTGGGCACTGATGTCGTTCGACAGTCCATCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 90 bp | CTTCTAAGGAGTTCAAGTCTTTGTCTAAAGCCCCAGGGACAGATCTaGTTCTTATGCTTGAAGTGTCCTCTAAGTCTTCCGCAAATGACT | + |
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Preference number: 5 (lower is better) Translates to: LLRSSSLCLKPQGQI*FLCLKCPLSLPQMT Trigger: AGTCATTTGCGGAAGACTTAGAGGACACTTCAAGCATAAGAAGCAGATCTGTCCCTGGGGCTTTAGACAAAGACTTGAACTCCTTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | TGGGCCATCATGAGTTGTCTTCTGCCTGACAGAAGACAAAGTATCTaGCTTGTCTACACATTGTTGTGCTTGCTCTTGGTTTTGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: WAIMSCLLPDRRQSI*LVYTLLCLLLVLCF Trigger: GAAACACAAAACCAAGAGCAAGCACAACAATGTGTAGACAAGTCAGATACTTTGTCTTCTGTCAGGCAGAAGACAACTCATGATGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 90 bp | AGTTCAAGTCTTTGTCTAAAGCCCCAGGGACAGATCTGCTTCTTATaGTTGAAGTGTCCTCTAAGTCTTCCGCAAATGACTCACTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SSSLCLKPQGQICFL*LKCPLSLPQMTHSN Trigger: ATTTGAGTGAGTCATTTGCGGAAGACTTAGAGGACACTTCAAGCATAAGAAGCAGATCTGTCCCTGGGGCTTTAGACAAAGACTTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | GAAGAAAACCCTTCTTCTTTGGGCCATCATGAGTTGTCTTCTGCCTaGCAGAAGACAAAGTATCTGACTTGTCTACACATTGTTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: EENPSSLGHHELSSA*QKTKYLTCLHIVVL Trigger: AAGCACAACAATGTGTAGACAAGTCAGATACTTTGTCTTCTGTCAGGCAGAAGACAACTCATGATGGCCCAAAGAAGAAGGGTTTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 90 bp | GATCTGAACTTGCTAAGAAGAAAACCCTTCTTCTTTGGGCCATCATaGGTTGTCTTCTGCCTGACAGAAGACAAAGTATCTGACTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: DLNLLRRKPFFFGPS*VVFCLTEDKVSDLS Trigger: AGACAAGTCAGATACTTTGTCTTCTGTCAGGCAGAAGACAACTCATGATGGCCCAAAGAAGAAGGGTTTTCTTCTTAGCAAGTTCAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 90 bp | CTGACAGAAGACAAAGTATCTGACTTGTCTACACATTGTTGTGCTTaGTCTTGGTTTTGTGTTTCTTCAGACCCTGGACTTCTTCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: LTEDKVSDLSTHCCA*SWFCVSSDPGLLLK Trigger: CTTAAGAAGAAGTCCAGGGTCTGAAGAAACACAAAACCAAGAGCAAGCACAACAATGTGTAGACAAGTCAGATACTTTGTCTTCTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CCA 90 bp | GAAGACAAAGTATCTGACTTGTCTACACATTGTTGTGCTTGCTCTTaGTTTTGTGTTTCTTCAGACCCTGGACTTCTTCTTAAGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: EDKVSDLSTHCCACS*FCVSSDPGLLLKMD Trigger: GTCCATCTTAAGAAGAAGTCCAGGGTCTGAAGAAACACAAAACCAAGAGCAAGCACAACAATGTGTAGACAAGTCAGATACTTTGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CCA 72 bp | TCCGCTCTGAGGAGAGTGAGGTGCCAGACACCGCTATaGAGGGTGTACCGGATGTGTTTCTGCGGTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: SALRRVRCQTPL*RVYRMCFCGDS Trigger: AGAGTCACCGCAGAAACACATCCGGTACACCCTCCATAGCGGTGTCTGGCACCTCACTCTCCTCAGAGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CCA 72 bp | ACTCGACACTCACTGCATACCCTGAGTGAGCAGGCTTaGCATGGATCTCCCCGGTCAAAGATGAGGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TRHSLHTLSEQA*HGSPRSKMRPR Trigger: CCTTGGCCTCATCTTTGACCGGGGAGATCCATGCCAAGCCTGCTCACTCAGGGTATGCAGTGAGTGTCGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | GTGAGCAGGCTTGGCATGGATCTCCCCGGTCAAAGATaGGGCCAAGGGTTTTGTGACAGTGAACGCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: VSRLGMDLPGQR*GQGFCDSERRL Trigger: GAGTCTGCGTTCACTGTCACAAAACCCTTGGCCTCATCTTTGACCGGGGAGATCCATGCCAAGCCTGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | AAGTCCGGTGACTCGACACTCACTGCATACCCTGAGTaGGCAGGCTTGGCATGGATCTCCCCGGTCAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: KSGDSTLTAYPE*AGLAWISPVKD Trigger: ATCTTTGACCGGGGAGATCCATGCCAAGCCTGCTCACTCAGGGTATGCAGTGAGTGTCGAGTCACCGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | CGTAGCATGAGAACCCCCTCTACAGATGTCCCAGGGTaGTCAGCCATCTTTTGCCAAAGGCGTTGCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSMRTPSTDVPG*SAIFCQRRCSS Trigger: GGAAGAGCAACGCCTTTGGCAAAAGATGGCTGACAACCCTGGGACATCTGTAGAGGGGGTTCTCATGCTACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | GTTGATGGAGGTCACACTATGAGCACTTGGGACTGGTaGCCTCTGAGTAACTGGGATTCCACCGTTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VDGGHTMSTWDW*PLSNWDSTVAV Trigger: TACAGCAACGGTGGAATCCCAGTTACTCAGAGGTCACCAGTCCCAAGTGCTCATAGTGTGACCTCCATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | GAAACTGTTGCGTCCAAACCGATCATAGTGCCAGACTaGGAGCTGCAGAGTTCTTGTTTCCAGCTGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ETVASKPIIVPD*ELQSSCFQLGV Trigger: CACACCCAGCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCACTATGATCGGTTTGGACGCAACAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | ACCGCTATGGAGGGTGTACCGGATGTGTTTCTGCGGTaGCTCTTTGTGAGCTCTTCACAGGTGTTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: TAMEGVPDVFLR*LFVSSSQVFSM Trigger: CATTGAAAACACCTGTGAAGAGCTCACAAAGAGTCACCGCAGAAACACATCCGGTACACCCTCCATAGCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 72 bp | AGTCAAAAGCAATCTCCACCTCTCCCAGGAAACTGTTaGGTCCAAACCGATCATAGTGCCAGACTGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SQKQSPPLPGNC*VQTDHSARLRA Trigger: AGCTCTCAGTCTGGCACTATGATCGGTTTGGACGCAACAGTTTCCTGGGAGAGGTGGAGATTGCTTTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | AGTAACTGGGATTCCACCGTTGCTGTAGCTGCTTTTTaGTGTTCTTCGTCCAGCCTCCTGGTCAATGAGATC | + |
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Preference number: 6 (lower is better) Translates to: SNWDSTVAVAAF*CSSSSLLVNEI Trigger: GATCTCATTGACCAGGAGGCTGGACGAAGAACATCAAAAAGCAGCTACAGCAACGGTGGAATCCCAGTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | GCTCCTCTTCCTATCAGATCCTGCTTGGGAGTTAGTTaGCAATCCACTTGCCAGACTGTGGGTATTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: APLPIRSCLGVS*QSTCQTVGICR Trigger: TCTGCAAATACCCACAGTCTGGCAAGTGGATTGTCAACTAACTCCCAAGCAGGATCTGATAGGAAGAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067529.9 |
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| CDS CAA 90 bp | CGCAGACTCTACTGGCCTCTTGGTGAGTCTTCCCACTCCTACGCTTaGCTTCTAAGAGTTCATTTTTCAGCTTCCTTATCCTCTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RRLYWPLGESSHSYA*LLRVHFSASLSSCL Trigger: AAGACAAGAGGATAAGGAAGCTGAAAAATGAACTCTTAGAAGCAAAGCGTAGGAGTGGGAAGACTCACCAAGAGGCCAGTAGAGTCTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CCA 72 bp | GCTTGGGAGTTAGTTGACAATCCACTTGCCAGACTGTaGGTATTTGCAGAAAACCTGGAGGACACTAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AWELVDNPLARL*VFAENLEDTKS Trigger: TGACTTAGTGTCCTCCAGGTTTTCTGCAAATACCCACAGTCTGGCAAGTGGATTGTCAACTAACTCCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067529.9 |
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| CDS CCA 72 bp | TGCCAGACTGAGAGCTGCAGAGTTCTTGTTTCCAGCTaGGTGTGGCTGATGGTATACTTTAATGTTTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: CQTESCRVLVSS*VWLMVYFNVSL Trigger: CAACGAAACATTAAAGTATACCATCAGCCACACCCAGCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | GGACTGTCGAACGACATCAGTGCCCAGAACATTGACTaGCTTGAAACGCTTTGCCTTTTCTTCCAAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GLSNDISAQNID*LETLCLFFQEP Trigger: TGGTTCTTGGAAGAAAAGGCAAAGCGTTTCAAGCAAGTCAATGTTCTGGGCACTGATGTCGTTCGACAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 90 bp | CTCATACCACTTCCAGAATTTAAACGAACACCTCCTAGAAAGACGTaGCTGGAAAAGGCCTCTTTGTCCCAGATGGTGAGTTCTAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LIPLPEFKRTPPRKT*LEKASLSQMVSSRQ Trigger: TTGCCTAGAACTCACCATCTGGGACAAAGAGGCCTTTTCCAGCAACGTCTTTCTAGGAGGTGTTCGTTTAAATTCTGGAAGTGGTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | AAGCCATGGAATTTTCAAAACCATGTTCTCTGCTGTTaGTGGAGGTCACACTATGAGCACTTGGGACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KPWNFQNHVLCC*WRSHYEHLGLV Trigger: CACCAGTCCCAAGTGCTCATAGTGTGACCTCCATCAACAGCAGAGAACATGGTTTTGAAAATTCCATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 72 bp | GACTGTCGAACGACATCAGTGCCCAGAACATTGACTTaGTTGAAACGCTTTGCCTTTTCTTCCAAGAACCAT | + |
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Preference number: 6 (lower is better) Translates to: DCRTTSVPRTLT*LKRFAFSSKNH Trigger: ATGGTTCTTGGAAGAAAAGGCAAAGCGTTTCAAGCAAGTCAATGTTCTGGGCACTGATGTCGTTCGACAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 72 bp | CTTTGTCTAAAGCCCCAGGGACAGATCTGCTTCTTATaGTTGAAGTGTCCTCTAAGTCTTCCGCAAATGACT | + |
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Preference number: 6 (lower is better) Translates to: LCLKPQGQICFL*LKCPLSLPQMT Trigger: AGTCATTTGCGGAAGACTTAGAGGACACTTCAAGCATAAGAAGCAGATCTGTCCCTGGGGCTTTAGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 72 bp | AGTTCAAGTCTTTGTCTAAAGCCCCAGGGACAGATCTaGTTCTTATGCTTGAAGTGTCCTCTAAGTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: SSSLCLKPQGQI*FLCLKCPLSLP Trigger: CGGAAGACTTAGAGGACACTTCAAGCATAAGAAGCAGATCTGTCCCTGGGGCTTTAGACAAAGACTTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | TACTGGCCTCTTGGTGAGTCTTCCCACTCCTACGCTTaGCTTCTAAGAGTTCATTTTTCAGCTTCCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: YWPLGESSHSYA*LLRVHFSASLS Trigger: GGATAAGGAAGCTGAAAAATGAACTCTTAGAAGCAAAGCGTAGGAGTGGGAAGACTCACCAAGAGGCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | ACACCGTCTTCAGTGTCTTCTAAGGAGTTCAAGTCTTaGTCTAAAGCCCCAGGGACAGATCTGCTTCTTATG | + |
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Preference number: 6 (lower is better) Translates to: TPSSVSSKEFKS*SKAPGTDLLLM Trigger: CATAAGAAGCAGATCTGTCCCTGGGGCTTTAGACAAAGACTTGAACTCCTTAGAAGACACTGAAGACGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | GGATTGGTACCCGTTCTGATTTTGGTCTTACGCTTGTaGTTTCGGGACTTGTCTGGAAGAAGGTATGACTTG | + |
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Preference number: 6 (lower is better) Translates to: GLVPVLILVLRL*FRDLSGRRYDL Trigger: CAAGTCATACCTTCTTCCAGACAAGTCCCGAAACAACAAGCGTAAGACCAAAATCAGAACGGGTACCAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | TCTGGATTGGTACCCGTTCTGATTTTGGTCTTACGCTaGTTGTTTCGGGACTTGTCTGGAAGAAGGTATGAC | + |
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Preference number: 6 (lower is better) Translates to: SGLVPVLILVLR*LFRDLSGRRYD Trigger: GTCATACCTTCTTCCAGACAAGTCCCGAAACAACAAGCGTAAGACCAAAATCAGAACGGGTACCAATCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | CTTCCAGAATTTAAACGAACACCTCCTAGAAAGACGTaGCTGGAAAAGGCCTCTTTGTCCCAGATGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LPEFKRTPPRKT*LEKASLSQMVS Trigger: ACTCACCATCTGGGACAAAGAGGCCTTTTCCAGCAACGTCTTTCTAGGAGGTGTTCGTTTAAATTCTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 90 bp | ACTAAGTCAACACCGTCTTCAGTGTCTTCTAAGGAGTTCAAGTCTTaGTCTAAAGCCCCAGGGACAGATCTGCTTCTTATGCTTGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: TKSTPSSVSSKEFKS*SKAPGTDLLLMLEV Trigger: CACTTCAAGCATAAGAAGCAGATCTGTCCCTGGGGCTTTAGACAAAGACTTGAACTCCTTAGAAGACACTGAAGACGGTGTTGACTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CCA 72 bp | TTAAGGCTAGTAGTTGACAATCCACTTGCCAGACTGTaGGTATTTGCAGAAAACCTGGAGGACACTAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRLVVDNPLARL*VFAENLEDTKS Trigger: TGACTTAGTGTCCTCCAGGTTTTCTGCAAATACCCACAGTCTGGCAAGTGGATTGTCAACTACTAGCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086165.4 |
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| CDS CAA 72 bp | TGTCGAACGACATCAGTGCCCAGAACATTGACTTGCTaGAAACGCTTTGCCTTTTCTTCCAAGAACCATTCT | + |
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Preference number: 6 (lower is better) Translates to: CRTTSVPRTLTC*KRFAFSSKNHS Trigger: AGAATGGTTCTTGGAAGAAAAGGCAAAGCGTTTCAAGCAAGTCAATGTTCTGGGCACTGATGTCGTTCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | GTTTCGTTGAATTCTGGATTGGTACCCGTTCTGATTTaGGTCTTACGCTTGTTGTTTCGGGACTTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VSLNSGLVPVLI*VLRLLFRDLSG Trigger: TCCAGACAAGTCCCGAAACAACAAGCGTAAGACCAAAATCAGAACGGGTACCAATCCAGAATTCAACGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 90 bp | AAGATGGACTGTCGAACGACATCAGTGCCCAGAACATTGACTTGCTaGAAACGCTTTGCCTTTTCTTCCAAGAACCATTCTCCACTTATA | + |
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Preference number: 6 (lower is better) Translates to: KMDCRTTSVPRTLTC*KRFAFSSKNHSPLI Trigger: TATAAGTGGAGAATGGTTCTTGGAAGAAAAGGCAAAGCGTTTCAAGCAAGTCAATGTTCTGGGCACTGATGTCGTTCGACAGTCCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 90 bp | TGGGTGTGGCTGATGGTATACTTTAATGTTTCGTTGAATTCTGGATaGGTACCCGTTCTGATTTTGGTCTTACGCTTGTTGTTTCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: WVWLMVYFNVSLNSG*VPVLILVLRLLFRD Trigger: GTCCCGAAACAACAAGCGTAAGACCAAAATCAGAACGGGTACCAATCCAGAATTCAACGAAACATTAAAGTATACCATCAGCCACACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | CCTTCTTCTTTGGGCCATCATGAGTTGTCTTCTGCCTaGCAGAAGACAAAGTATCTGACTTGTCTACACATT | + |
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Preference number: 6 (lower is better) Translates to: PSSLGHHELSSA*QKTKYLTCLHI Trigger: AATGTGTAGACAAGTCAGATACTTTGTCTTCTGTCAGGCAGAAGACAACTCATGATGGCCCAAAGAAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | CAGATGGTGAGTTCTAGGCAAGCATTCTTTATATCCTaGGGATACAGGCCACTGAATATGAACGTATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QMVSSRQAFFIS*GYRPLNMNVWF Trigger: GAACCATACGTTCATATTCAGTGGCCTGTATCCTCAGGATATAAAGAATGCTTGCCTAGAACTCACCATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | ACTGTAAACACTCATCATGCTGTTAAGGCTAGTAGTTaGCAATCCACTTGCCAGACTGTGGGTATTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TVNTHHAVKASS*QSTCQTVGICR Trigger: TCTGCAAATACCCACAGTCTGGCAAGTGGATTGTCAACTACTAGCCTTAACAGCATGATGAGTGTTTACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086165.4 |
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| CDS CCA 72 bp | ACTGAGAGCTGCAGAGTTCTTGTTTCCAGCTGGGTGTaGCTGATGGTATACTTTAATGTTTCGTTGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: TESCRVLVSSWV*LMVYFNVSLNS Trigger: AGAATTCAACGAAACATTAAAGTATACCATCAGCCACACCCAGCTGGAAACAAGAACTCTGCAGCTCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | AGCTGGGTGTGGCTGATGGTATACTTTAATGTTTCGTaGAATTCTGGATTGGTACCCGTTCTGATTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SWVWLMVYFNVS*NSGLVPVLILV Trigger: GACCAAAATCAGAACGGGTACCAATCCAGAATTCAACGAAACATTAAAGTATACCATCAGCCACACCCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | ATGAGTTGTCTTCTGCCTGACAGAAGACAAAGTATCTaGCTTGTCTACACATTGTTGTGCTTGCTCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: MSCLLPDRRQSI*LVYTLLCLLLV Trigger: AACCAAGAGCAAGCACAACAATGTGTAGACAAGTCAGATACTTTGTCTTCTGTCAGGCAGAAGACAACTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS TCA 72 bp | TTGCTAAGAAGAAAACCCTTCTTCTTTGGGCCATCATaGGTTGTCTTCTGCCTGACAGAAGACAAAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: LLRRKPFFFGPS*VVFCLTEDKVS Trigger: AGATACTTTGTCTTCTGTCAGGCAGAAGACAACTCATGATGGCCCAAAGAAGAAGGGTTTTCTTCTTAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 72 bp | GACAAAGTATCTGACTTGTCTACACATTGTTGTGCTTaGTCTTGGTTTTGTGTTTCTTCAGACCCTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: DKVSDLSTHCCA*SWFCVSSDPGL Trigger: AAGTCCAGGGTCTGAAGAAACACAAAACCAAGAGCAAGCACAACAATGTGTAGACAAGTCAGATACTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CCA 72 bp | GTATCTGACTTGTCTACACATTGTTGTGCTTGCTCTTaGTTTTGTGTTTCTTCAGACCCTGGACTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSDLSTHCCACS*FCVSSDPGLLL Trigger: AAGAAGAAGTCCAGGGTCTGAAGAAACACAAAACCAAGAGCAAGCACAACAATGTGTAGACAAGTCAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 90 bp | TACTTTAATGTTTCGTTGAATTCTGGATTGGTACCCGTTCTGATTTaGGTCTTACGCTTGTTGTTTCGGGACTTGTCTGGAAGAAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: YFNVSLNSGLVPVLI*VLRLLFRDLSGRRY Trigger: ATACCTTCTTCCAGACAAGTCCCGAAACAACAAGCGTAAGACCAAAATCAGAACGGGTACCAATCCAGAATTCAACGAAACATTAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS GCA 72 bp | ATCAGTGCCCAGAACATTGACTTGCTTGAAACGCTTTaGCTTTTCTTCCAAGAACCATTCTCCACTTATAAT | + |
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Preference number: 6 (lower is better) Translates to: ISAQNIDLLETL*LFFQEPFSTYN Trigger: ATTATAAGTGGAGAATGGTTCTTGGAAGAAAAGGCAAAGCGTTTCAAGCAAGTCAATGTTCTGGGCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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| CDS CAA 72 bp | CTGATGGTATACTTTAATGTTTCGTTGAATTCTGGATaGGTACCCGTTCTGATTTTGGTCTTACGCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LMVYFNVSLNSG*VPVLILVLRLL Trigger: CAACAAGCGTAAGACCAAAATCAGAACGGGTACCAATCCAGAATTCAACGAAACATTAAAGTATACCATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067529.9 ENSMUST00000086165.4 |
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