Pregenerated sensors for SYTL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041831Ensembl transcript IDs: ENSMUST00000097430.10, ENSMUST00000115763.10, ENSMUST00000159394.8, ENSMUST00000160483.9, ENSMUST00000162635.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGATCACTTCTCCGAGGAACACCCTCCGGGCAAGGGTGCCTAGGTaGCACACAGAGACCTGCAGCCTCCGGGTCATCAGCTGGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: RITSPRNTLRARVPR*HTETCSLRVISWPG Trigger: CCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGCCCGGAGGGTGTTCCTCGGAGAAGTGATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | ATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTaGCTGGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: IGCAGLPGSHVDCSV*LAPPLRVSHTLPGV Trigger: GACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR GCA 90 bp | CCAGTGGAAGGATCACTTCTCCGAGGAACACCCTCCGGGCAAGGGTaGCTAGGTGCCACACAGAGACCTGCAGCCTCCGGGTCATCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PVEGSLLRGTPSGQG*LGATQRPAASGSSA Trigger: AGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGCCCGGAGGGTGTTCCTCGGAGAAGTGATCCTTCCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | GGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTaGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTGGGGTCCATG | + |
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Preference number: 1 (lower is better) Translates to: GVLAFLEVTLTAVSD*LRLSVCPTHCLGSM Trigger: CATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR GCA 90 bp | ACTGCAGTGTCTGACTGGCTCCGCCTCTCCGTGTGTCCCACACACTaGCTGGGGTCCATGGCCAGAAGATGCTTCTCAGAGGTCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: TAVSDWLRLSVCPTH*LGSMARRCFSEVMS Trigger: TGACATGACCTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 |
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| 3UTR CCA 90 bp | AACCTGAGTCGGGACAACCCGCAGCACCTCCCTTTGAACCAAGCCTaGCTTCCCCGAGCAGACGGTCGTTCATACCAAAGATGGCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: NLSRDNPQHLPLNQA*LPRADGRSYQRWPG Trigger: ACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAAGCCAGGCTTGGTTCAAAGGGAGGTGCTGCGGGTTGTCCCGACTCAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | CTGTCCACAGGTTTGGGCTGGAGAGGACTCTGTGCCACTGAAGCTTaGACTGTGAACCTGAGTCGGGACAACCCGCAGCACCTCCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LSTGLGWRGLCATEA*TVNLSRDNPQHLPL Trigger: CAAAGGGAGGTGCTGCGGGTTGTCCCGACTCAGGTTCACAGTCCAAGCTTCAGTGGCACAGAGTCCTCTCCAGCCCAAACCTGTGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | CAGTGTCTGACTGGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTaGGGTCCATGGCCAGAAGATGCTTCTCAGAGGTCATGTCATTCT | + |
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Preference number: 1 (lower is better) Translates to: QCLTGSASPCVPHTA*GPWPEDASQRSCHS Trigger: AGAATGACATGACCTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 |
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| 3UTR CCA 90 bp | TCTGGCATTCTGTGCCGTACTGTCCTTAAAGTCCCACATGGCCAGTaGAAGGATCACTTCTCCGAGGAACACCCTCCGGGCAAGGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: SGILCRTVLKVPHGQ*KDHFSEEHPPGKGA Trigger: GGCACCCTTGCCCGGAGGGTGTTCCTCGGAGAAGTGATCCTTCCACTGGCCATGTGGGACTTTAAGGACAGTACGGCACAGAATGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | AACCAAGCCTGGCTTCCCCGAGCAGACGGTCGTTCATACCAAAGATaGCCTGGTCCCAGACAGTCAGCTCCAAGGTGGACTGTCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: NQAWLPRADGRSYQR*PGPRQSAPRWTVSA Trigger: AGCTGAGACAGTCCACCTTGGAGCTGACTGTCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAAGCCAGGCTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | ATGCTTTCAGAATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTTaGCTGCAGTGTCTGACTGGCTCCGCCTCTCCGTGTGTCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: MLSEYRVCWPSWKSR*LQCLTGSASPCVPH Trigger: GTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGATATTCTGAAAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | ACAGAGACCTGCAGCCTCCGGGTCATCAGCTGGCCAGGGTCCACCTaGTACTTCAAGGTTTCCTCGAAAGTCGGGTCCAGCGTGTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: TETCSLRVISWPGST*YFKVSSKVGSSVFF Trigger: AAAGAACACGCTGGACCCGACTTTCGAGGAAACCTTGAAGTATCAGGTGGACCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR GCA 90 bp | GACCACAGAGATTTTGCTCAGCCTCTGATAAGATTGCAGGAGCTTTaGCCCAGCGGTCTCGCGTCGGCCTGCAGTTGGAAATTTCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: DHRDFAQPLIRLQEL*PSGLASACSWKFPG Trigger: GCCAGGAAATTTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTGAGCAAAATCTCTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR GCA 90 bp | CTCTCCGTGTGTCCCACACACTGCCTGGGGTCCATGGCCAGAAGATaGTTCTCAGAGGTCATGTCATTCTGGGACTTGGAGAGCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LSVCPTHCLGSMARR*FSEVMSFWDLESFL Trigger: GAGAAAGCTCTCCAAGTCCCAGAATGACATGACCTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR GCA 90 bp | CTGATAAGATTGCAGGAGCTTTGCCCCAGCGGTCTCGCGTCGGCCTaGAGTTGGAAATTTCCTGGCTCGTTCTTCAAAGAACCATTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LIRLQELCPSGLASA*SWKFPGSFFKEPFS Trigger: GGAGAATGGTTCTTTGAAGAACGAGCCAGGAAATTTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR CCA 90 bp | AGATTGCAGGAGCTTTGCCCCAGCGGTCTCGCGTCGGCCTGCAGTTaGAAATTTCCTGGCTCGTTCTTCAAAGAACCATTCTCCGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RLQELCPSGLASACS*KFPGSFFKEPFSGF Trigger: AAAACCGGAGAATGGTTCTTTGAAGAACGAGCCAGGAAATTTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR CCA 90 bp | CACAAAGGAGTGTTTCCACTGGGGACAAGCCTGCTTCTTCAGGACTaGGGACTTCACACGCAGCTTTTGTTGGTTTGGCAGGGTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: HKGVFPLGTSLLLQD*GLHTQLLLVWQGET Trigger: TGTCTCACCCTGCCAAACCAACAAAAGCTGCGTGTGAAGTCCCCAGTCCTGAAGAAGCAGGCTTGTCCCCAGTGGAAACACTCCTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | ATGGCCTGGTCCCAGACAGTCAGCTCCAAGGTGGACTGTCTCAGCTaGGAACTGCTCACACCATTAAACACAAAGGAGTGTTTCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: MAWSQTVSSKVDCLS*ELLTPLNTKECFHW Trigger: CCAGTGGAAACACTCCTTTGTGTTTAATGGTGTGAGCAGTTCTCAGCTGAGACAGTCCACCTTGGAGCTGACTGTCTGGGACCAGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | TGGACGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTaGGATCTTCTTGATGGAATGCTTTCAGAATATCGGGTGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: WTGECLASKQGREGV*DLLDGMLSEYRVCW Trigger: CCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCCCCGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | CTTGGGCCTCCTGGGGCTTTCTTGGCCCTGCGGGAAGGACCAATTTaGCTCGAACAGCAAGTTCTCCATTATTCTGAGGAATATTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LGPPGAFLALREGPI*LEQQVLHYSEEYSL Trigger: AAGAGAATATTCCTCAGAATAATGGAGAACTTGCTGTTCGAGCCAAATTGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAGGCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | GTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTaGTGGAATGCTTTCAGAATATCGGGTGTGCTGGCCTTCCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: VSCFKTGSGGCLGSS*WNAFRISGVLAFLE Trigger: TTCCAGGAAGGCCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR GCA 90 bp | CTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGGAATaGTTTCAGAATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTT | + |
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Preference number: 1 (lower is better) Translates to: LQNRVGRVFGIFLME*FQNIGCAGLPGSHV Trigger: AACGTGACTTCCAGGAAGGCCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CCA 90 bp | CAAGCCTGCTTCTTCAGGACTGGGGACTTCACACGCAGCTTTTGTTaGTTTGGCAGGGTGAGACAGCCCTTAACAAATGAGTTTAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: QACFFRTGDFTRSFC*FGRVRQPLTNEFKV Trigger: CACCTTAAACTCATTTGTTAAGGGCTGTCTCACCCTGCCAAACCAACAAAAGCTGCGTGTGAAGTCCCCAGTCCTGAAGAAGCAGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | GCGGGAAGGACCAATTTGGCTCGAACAGCAAGTTCTCCATTATTCTaGGGAATATTCTCTTCGTATTTCTCAGCCTTGGCCCGCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: AGRTNLARTASSPLF*GIFSSYFSALARRG Trigger: TCCTCTGCGGGCCAAGGCTGAGAAATACGAAGAGAATATTCCTCAGAATAATGGAGAACTTGCTGTTCGAGCCAAATTGGTCCTTCCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR TCA 90 bp | TTGTTCCGTGTCCTAACGACACACATTACTGTAGTCAGTTATTGGTaGTCCAGTGTGTCTGATTCTGCCATGATCCCACTTCCTGTTGAC | + |
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Preference number: 1 (lower is better) Translates to: LFRVLTTHITVVSYW*SSVSDSAMIPLPVD Trigger: GTCAACAGGAAGTGGGATCATGGCAGAATCAGACACACTGGATCACCAATAACTGACTACAGTAATGTGTGTCGTTAGGACACGGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGTGCCACACAGAGACCTGCAGCCTCCGGGTCATCAGCTGGCCAGGGTCCTGCACTGGCTCTCACTaGAAGGTGGTGGTGTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: PRCHTETCSLRVISWPGSCTGSH*KVVVSE Trigger: CTCCGACACCACCACCTTTCAGTGAGAGCCAGTGCA...GGACCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR-3UTR TCA 90 bp | CCGTGTGTCCCACACACTGCCTGGGGTCCATGGCCAGAAGATGCTTCTCAGAGGGTTGACTGCAGTGTCTaGCTGGCTCCGCCTCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: PCVPHTAWGPWPEDASQRVDCSV*LAPPLR Trigger: ACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAAC...CCTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTGGCTCCGCGTGTGTCCCACACACTaGCTGGGGTCCATGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GVLAFLEVTLTAVSDWLRVCPTH*LGSMAR Trigger: TCTGGCCATGGACCCCAGGCAGTGTGTGGGACACAC...GCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CAA 90 bp | TGGTGTCGGAGGGACCACAGAGATTTTGCTCAGCCTCTGATAAGATaGCAGGAGCTTTGCCCCAGCGGTCTCGCGTCGGCCTGCAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: WCRRDHRDFAQPLIR*QELCPSGLASACSW Trigger: CCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTGAGCAAAATCTCTGTGGTCCCTCCGACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR CAA 90 bp | GCTTGGACTGTGAACCTGAGTCGGGACAACCCGCAGCACCTCCCTTaGAACCAAGCCTGGCTTCCCCGAGCAGACGGTCGTTCATACCAA | + |
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Preference number: 2 (lower is better) Translates to: AWTVNLSRDNPQHLP*NQAWLPRADGRSYQ Trigger: TTGGTATGAACGACCGTCTGCTCGGGGAAGCCAGGCTTGGTTCAAAGGGAGGTGCTGCGGGTTGTCCCGACTCAGGTTCACAGTCCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR TCA 90 bp | CGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGGTTGACTGCAGTGTCTaGCTGGCTCCGCCTCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: RGSVLLQNRVGRVFGIFLVDCSV*LAPPLR Trigger: ACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAAC...CAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCGAGCAGACGGTCGTTCATACCAAAGATGGCCTGGTCCCAGACAGTCAGACTGCCTGGGGTCCATaGCCAGAAGATGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FPEQTVVHTKDGLVPDSQTAWGP*PEDASQ Trigger: CTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGT...CTGACTGTCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGCTTCCCCGAGCAGACGGTCGTTCATACCAAAGATGGCCTGGTCCCAGAACACGCAGCTTTTGTTaGTTTGGCAGGGTGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: AWLPRADGRSYQRWPGPRTRSFC*FGRVRQ Trigger: CTGTCTCACCCTGCCAAACCAACAAAAGCTGCGTGT...TCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAAGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CAA 90 bp | AATGCTTTCAGAATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTaGACTGCAGTGTCTGACTGGCTCCGCCTCTCCGTGTGTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: NAFRISGVLAFLEVT*TAVSDWLRLSVCPT Trigger: TGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGATATTCTGAAAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CAA 90 bp | GGACCACAGAGATTTTGCTCAGCCTCTGATAAGATTGCAGGAGCTTaGCCCCAGCGGTCTCGCGTCGGCCTGCAGTTGGAAATTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GPQRFCSASDKIAGA*PQRSRVGLQLEISW Trigger: CCAGGAAATTTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTGAGCAAAATCTCTGTGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCAGAGGTCATGTCATTCTGGGACTTGGAGAGCTTTCTCATCTGGGTGGGTGTGTCCCACACACTaGCTGGGGTCCATGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ASQRSCHSGTWRAFSSGWVCPTH*LGSMAR Trigger: TCTGGCCATGGACCCCAGGCAGTGTGTGGGACACAC...CCACCCAGATGAGAAAGCTCTCCAAGTCCCAGAATGACATGACCTCTGAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTGACCTTCTTGGGCCTCCTGGGGCTTTCTTGGCCCTGCGGGAAGGACCAGGTTCTTACAGGTCTTaGTGCATATCTCTAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LADLLGPPGAFLALREGPGSYRS*CISLKS Trigger: GCTCTTTAGAGATATGCATCAAGACCTGTAAGAACC...TGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAGGCCCAAGAAGGTCAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCCACACAGAGACCTGCAGCCTCCGGGTCATCAGCTGGCCAGGGTCCACCATCTTCTTGATGGAATaGTTTCAGAATATCGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: RCHTETCSLRVISWPGSTIFLME*FQNIGC Trigger: ACACCCGATATTCTGAAAGCATTCCATCAAGAAGAT...GGTGGACCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCTGCTTCTTCAGGACTGGGGACTTCACACGCAGCTTTTGTTGGTTTGGCACTGCCTGGGGTCCATaGCCAGAAGATGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QACFFRTGDFTRSFCWFGTAWGP*PEDASQ Trigger: CTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGT...GCCAAACCAACAAAAGCTGCGTGTGAAGTCCCCAGTCCTGAAGAAGCAGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR CAA 90 bp | AAGATTGCAGGAGCTTTGCCCCAGCGGTCTCGCGTCGGCCTGCAGTaGGAAATTTCCTGGCTCGTTCTTCAAAGAACCATTCTCCGGTTT | + |
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Preference number: 2 (lower is better) Translates to: KIAGALPQRSRVGLQ*EISWLVLQRTILRF Trigger: AAACCGGAGAATGGTTCTTTGAAGAACGAGCCAGGAAATTTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCTACCATTCTCCGGTTTTaGTTTTCACGTTTCTCTATC | + |
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Preference number: 2 (lower is better) Translates to: SLQRRQRCVSDWTGECLATILRF*FSRFSI Trigger: GATAGAGAAACGTGAAAATCAAAACCGGAGAATGGT...AGCAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTTTGGGCTGGAGAGGACTCTGTGCCACTGAAGCTTGGACTGTGAACCTGTCACCGGTAAATTCTTaGCTCCCAACACAACCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TGLGWRGLCATEAWTVNLSPVNS*LPTQPD Trigger: GTCTGGTTGTGTTGGGAGCCAAGAATTTACCGGTGA...CAGGTTCACAGTCCAAGCTTCAGTGGCACAGAGTCCTCTCCAGCCCAAACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGATCCCACTTCCTGTTaGCCTTTGTGGGTTCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RSEHFHIYLLTVASPTAWDPTSC*PLWVRS Trigger: ACTGCGAACCCACAAAGGTCAACAGGAAGTGGGATC...CCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
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| 3UTR CAA 90 bp | AGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTaGATGGAATGCTTTCAGAATATCGGGTGTGCTGGCCTTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVLLQNRVGRVFGIF*MECFQNIGCAGLPG Trigger: TCCAGGAAGGCCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTTGTCTGATTCTGCCATaGTCCCACTTCCTGTTGACC | + |
|
Preference number: 2 (lower is better) Translates to: IRTFPHLSVDSSLPDCLGCLILP*SHFLLT Trigger: GGTCAACAGGAAGTGGGATCATGGCAGAATCAGACA...ACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR CAA 90 bp | GTGACATTAGCATTGTCAAAATTACCCATCTCTGTGCAGGTGCTGTaGATGTCACGTGTCTCAAGCCTCCAGAGAAGACAGCGCTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VTLALSKLPISVQVL*MSRVSSLQRRQRCV Trigger: CACACAGCGCTGTCTTCTCTGGAGGCTTGAGACACGTGACATCAACAGCACCTGCACAGAGATGGGTAATTTTGACAATGCTAATGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTTCCGTGTCTCAAGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGACTGTTTGGGATCTTCTTaGTGGAATGCTTTCAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: KLPCLKPPEKTALCVGLDCLGSS*WNAFRI Trigger: TATTCTGAAAGCATTCCATCAAGAAGATCCCAAACA...GTCCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCTTGAGACACGGAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CAA 90 bp | TCCATGGCCAGAAGATGCTTCTCAGAGGTCATGTCATTCTGGGACTaGGAGAGCTTTCTCATCTGGGTGGTGACAGACAGAAACAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SMARRCFSEVMSFWD*ESFLIWVVTDRNKF Trigger: AAACTTGTTTCTGTCTGTCACCACCCAGATGAGAAAGCTCTCCAAGTCCCAGAATGACATGACCTCTGAGAAGCATCTTCTGGCCATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR CAA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTaGACAGTAGCCTCCCCGACTGCCTGGGTAACAGTAATTGTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: SVERLLRSEHFHIYL*TVASPTAWVTVIVP Trigger: CGGAACAATTACTGTTACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR CAA 90 bp | GTGACATTAGCATTGTCAAAATTACCCATCTCTGTGCAGGTGCTGTaGATGCTAATTAAGCTTCCGTGTCTCAAGCCTCCAGAGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: VTLALSKLPISVQVL*MLIKLPCLKPPEKT Trigger: TGTCTTCTCTGGAGGCTTGAGACACGGAAGCTTAATTAGCATCAACAGCACCTGCACAGAGATGGGTAATTTTGACAATGCTAATGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTaGGTAACAGTAATTGTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: SVERLLRSEHFHIYLLTVASPTA*VTVIVP Trigger: CGGAACAATTACTGTTACCCAGGCAGTCGGGGAGGC...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGACCAATTTGGCTCGAACAGCAAGTTCTCCATTATTCTGAGGAATATTCTTGTCATTCTGGGACTTaGAGAGCTTTCTCATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: EGPIWLEQQVLHYSEEYSCHSGT*RAFSSG Trigger: CCCAGATGAGAAAGCTCTCCAAGTCCCAGAATGACA...AGAATATTCCTCAGAATAATGGAGAACTTGCTGTTCGAGCCAAATTGGTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR CAA 90 bp | GTTGGAAATTTCCTGGCTCGTTCTTCAAAGAACCATTCTCCGGTTTaGATTTTCACGTTTCTCTATCCTCAGCACCAATTAAAAGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VGNFLARSSKNHSPV*IFTFLYPQHQLKAC Trigger: GCAGGCTTTTAATTGGTGCTGAGGATAGAGAAACGTGAAAATCAAAACCGGAGAATGGTTCTTTGAAGAACGAGCCAGGAAATTTCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGTAGTCAGTTATTGGTaGTCCAGTGTGTCTGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SVERLLRSEHFHIYLLTVVVSYW*SSVSDS Trigger: AGAATCAGACACACTGGATCACCAATAACTGACTAC...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR GCA 72 bp | CTCCGGGCAAGGGTGCCTAGGTGCCACACAGAGACCTaGAGCCTCCGGGTCATCAGCTGGCCAGGGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LRARVPRCHTET*SLRVISWPGST Trigger: GGTGGACCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGCCCGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR GCA 72 bp | TCTCCGAGGAACACCCTCCGGGCAAGGGTGCCTAGGTaGCACACAGAGACCTGCAGCCTCCGGGTCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPRNTLRARVPR*HTETCSLRVIS Trigger: GCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGCCCGGAGGGTGTTCCTCGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR GCA 72 bp | GGATCACTTCTCCGAGGAACACCCTCCGGGCAAGGGTaGCTAGGTGCCACACAGAGACCTGCAGCCTCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSLLRGTPSGQG*LGATQRPAASG Trigger: CCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGCCCGGAGGGTGTTCCTCGGAGAAGTGATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR TCA 72 bp | GCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTaGCTGGCTCCGCCTCTCCGTGTGTCCCACACACTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLPGSHVDCSV*LAPPLRVSHTL Trigger: CAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR GCA 72 bp | TCTGACTGGCTCCGCCTCTCCGTGTGTCCCACACACTaGCTGGGGTCCATGGCCAGAAGATGCTTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SDWLRLSVCPTH*LGSMARRCFSE Trigger: CTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | GCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTaGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFLEVTLTAVSD*LRLSVCPTHCL Trigger: CAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | TGGCCAAGTTCCTGTAACCTGCTGGAGCTGCTGCACTaGCTCTCACTGAAAGGTGGTGGTGTCGGAGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: WPSSCNLLELLH*LSLKGGGVGGT Trigger: GGTCCCTCCGACACCACCACCTTTCAGTGAGAGCCAGTGCAGCAGCTCCAGCAGGTTACAGGAACTTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR CCA 72 bp | CGGGACAACCCGCAGCACCTCCCTTTGAACCAAGCCTaGCTTCCCCGAGCAGACGGTCGTTCATACCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RDNPQHLPLNQA*LPRADGRSYQR Trigger: TCTTTGGTATGAACGACCGTCTGCTCGGGGAAGCCAGGCTTGGTTCAAAGGGAGGTGCTGCGGGTTGTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | GGTTTGGGCTGGAGAGGACTCTGTGCCACTGAAGCTTaGACTGTGAACCTGAGTCGGGACAACCCGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLGWRGLCATEA*TVNLSRDNPQH Trigger: GTGCTGCGGGTTGTCCCGACTCAGGTTCACAGTCCAAGCTTCAGTGGCACAGAGTCCTCTCCAGCCCAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCAGCCTCTGATAAGATaGCAGGAGCTTTGCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QASREDSAVCRTGRGSVLQPLIR*QELCPS Trigger: GCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTG...CAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR TCA 72 bp | GTCCACAGGTTTGGGCTGGAGAGGACTCTGTGCCACTaGAGCTTGGACTGTGAACCTGAGTCGGGACAACCC | + |
|
Preference number: 3 (lower is better) Translates to: VHRFGLERTLCH*SLDCEPESGQP Trigger: GGGTTGTCCCGACTCAGGTTCACAGTCCAAGCTTCAGTGGCACAGAGTCCTCTCCAGCCCAAACCTGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR GCA 72 bp | CTGACCTTCTTGGGCCTCCTGGGGCTTTCTTGGCCCTaGGGGAAGGACCAATTTGGCTCGAACAGCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LTFLGLLGLSWP*GKDQFGSNSKF Trigger: GAACTTGCTGTTCGAGCCAAATTGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAGGCCCAAGAAGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | CTGTGCCGTACTGTCCTTAAAGTCCCACATGGCCAGTaGAAGGATCACTTCTCCGAGGAACACCCTCCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LCRTVLKVPHGQ*KDHFSEEHPPG Trigger: GCCCGGAGGGTGTTCCTCGGAGAAGTGATCCTTCCACTGGCCATGTGGGACTTTAAGGACAGTACGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | TCCCCGAGCAGACGGTCGTTCATACCAAAGATGGCCTaGTCCCAGACAGTCAGCTCCAAGGTGGACTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPSRRSFIPKMA*SQTVSSKVDCL Trigger: GAGACAGTCCACCTTGGAGCTGACTGTCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | TGGCTTCCCCGAGCAGACGGTCGTTCATACCAAAGATaGCCTGGTCCCAGACAGTCAGCTCCAAGGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: WLPRADGRSYQR*PGPRQSAPRWT Trigger: AGTCCACCTTGGAGCTGACTGTCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCTTGGGCCTCCTGGGGCTTTCTTGGCCCTGCGGGAAGGACCAATTTGGCTTCTGTGCAGGTGCTGTaGATGCTAATTAAGCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: PSWASWGFLGPAGRTNLASVQVL*MLIKLP Trigger: CGGAAGCTTAATTAGCATCAACAGCACCTGCACAGA...AGCCAAATTGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAGGCCCAAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR GCA 72 bp | TTGCAGGAGCTTTGCCCCAGCGGTCTCGCGTCGGCCTaGAGTTGGAAATTTCCTGGCTCGTTCTTCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LQELCPSGLASA*SWKFPGSFFKE Trigger: TTCTTTGAAGAACGAGCCAGGAAATTTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR GCA 72 bp | AGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGGAATaGTTTCAGAATATCGGGTGTGCTGGCCTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVGRVFGIFLME*FQNIGCAGLPG Trigger: TCCAGGAAGGCCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCCAGTGACATTAGCATaGTCAAAATTACCCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QASREDSAVCRTGRGSVLPVTLA*SKLPIS Trigger: AGAGATGGGTAATTTTGACAATGCTAATGTCACTGG...CAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTGGATGTCATTCTGGGACTaGGAGAGCTTTCTCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISGVLAFLEVTLTAVSDWMSFWD*ESFLIW Trigger: CCAGATGAGAAAGCTCTCCAAGTCCCAGAATGACAT...CCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACACACTGCCTGGGGTCCATGGCCAGAAGATGCTTCTCAGAGGTCATGTCGTGTTTGGGATCTTCTaGATGGAATGCTTTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SHTLPGVHGQKMLLRGHVVFGIF*MECFQN Trigger: ATTCTGAAAGCATTCCATCAAGAAGATCCCAAACAC...GACATGACCTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCCGAGCAGACGGTCGTTCATACCAAAGATGGCCTGGTCCCAGACAGTCAGAGGTTCTTACAGGTCTaGATGCATATCTCTAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FPEQTVVHTKDGLVPDSQRFLQV*MHISKE Trigger: CTCTTTAGAGATATGCATCAAGACCTGTAAGAACCT...CTGACTGTCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR TCA 72 bp | TTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTaGTGGAATGCTTTCAGAATATCGGGTGTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FKTGSGGCLGSS*WNAFRISGVLA Trigger: GGCCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR GCA 72 bp | TTAAACACAAAGGAGTGTTTCCACTGGGGACAAGCCTaGTTCTTCAGGACTGGGGACTTCACACGCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNTKECFHWGQA*FFRTGDFTRSF Trigger: AAAGCTGCGTGTGAAGTCCCCAGTCCTGAAGAAGCAGGCTTGTCCCCAGTGGAAACACTCCTTTGTGTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR TCA 72 bp | CATTGTCAAAATTACCCATCTCTGTGCAGGTGCTGTTaGTGTCACGTGTCTCAAGCCTCCAGAGAAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: HCQNYPSLCRCC*CHVSQASREDS Trigger: GCTGTCTTCTCTGGAGGCTTGAGACACGTGACATCAACAGCACCTGCACAGAGATGGGTAATTTTGACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| 3UTR TCA 72 bp | TCAGTTATTGGTGATCCAGTGTGTCTGATTCTGCCATaGTCCCACTTCCTGTTGACCTTTGTGGGTTCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVIGDPVCLILP*SHFLLTFVGSQ Trigger: CTGCGAACCCACAAAGGTCAACAGGAAGTGGGATCATGGCAGAATCAGACACACTGGATCACCAATAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR CCA 72 bp | TATTCTGAGGAATATTCTCTTCGTATTTCTCAGCCTTaGCCCGCAGAGGATACCATCTGGCATTCTGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: YSEEYSLRISQP*PAEDTIWHSVP Trigger: CGGCACAGAATGCCAGATGGTATCCTCTGCGGGCCAAGGCTGAGAAATACGAAGAGAATATTCCTCAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | GAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTaGGATCTTCTTGATGGAATGCTTTCAGAATATCGG | + |
|
Preference number: 3 (lower is better) Translates to: ECLASKQGREGV*DLLDGMLSEYR Trigger: CCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CCA 72 bp | GTCATGTCATTCTGGGACTTGGAGAGCTTTCTCATCTaGGTGGTGACAGACAGAAACAAGTTTTCCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VMSFWDLESFLI*VVTDRNKFSTD Trigger: GTCTGTGGAAAACTTGTTTCTGTCTGTCACCACCCAGATGAGAAAGCTCTCCAAGTCCCAGAATGACATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| 3UTR TCA 72 bp | GTCCTAACGACACACATTACTGTAGTCAGTTATTGGTaGTCCAGTGTGTCTGATTCTGCCATGATCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: VLTTHITVVSYW*SSVSDSAMIPL Trigger: AAGTGGGATCATGGCAGAATCAGACACACTGGATCACCAATAACTGACTACAGTAATGTGTGTCGTTAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGGAATGCTTTCCAGTGACATTAGCATaGTCAAAATTACCCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLQNRVGRVFGIFLMECFPVTLA*SKLPIS Trigger: AGAGATGGGTAATTTTGACAATGCTAATGTCACTGG...AAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR TCA 72 bp | ACCAATTTGGCTCGAACAGCAAGTTCTCCATTATTCTaGGGAATATTCTCTTCGTATTTCTCAGCCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TNLARTASSPLF*GIFSSYFSALA Trigger: GGCCAAGGCTGAGAAATACGAAGAGAATATTCCTCAGAATAATGGAGAACTTGCTGTTCGAGCCAAATTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGTGACATTAGCATTGTCAAAATTACCCATCTCTGTGCAGGTGCTGTTGGTGTTTGGGATCTTCTaGATGGAATGCTTTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SPVTLALSKLPISVQVLLVFGIF*MECFQN Trigger: ATTCTGAAAGCATTCCATCAAGAAGATCCCAAACAC...CAACAGCACCTGCACAGAGATGGGTAATTTTGACAATGCTAATGTCACTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTGGGGTCCATGGCCAGAAGCTGGAGCTGCTGCACTaGCTCTCACTGAAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAPPLRVSHTLPGVHGQKLELLH*LSLKGG Trigger: ACCACCTTTCAGTGAGAGCCAGTGCAGCAGCTCCAG...CTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000162635.8 |
||
| 3UTR CAA 72 bp | GTGAACCTGAGTCGGGACAACCCGCAGCACCTCCCTTaGAACCAAGCCTGGCTTCCCCGAGCAGACGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VNLSRDNPQHLP*NQAWLPRADGR Trigger: ACGACCGTCTGCTCGGGGAAGCCAGGCTTGGTTCAAAGGGAGGTGCTGCGGGTTGTCCCGACTCAGGTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTGGGGTCCATGGCCAGAAGCCTCAAAGCAAACCGTaGACTTCCATGCACGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAPPLRVSHTLPGVHGQKPQSKP*TSMHES Trigger: GGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGG...CTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCCACACAGAGACCTGCAGCCTCCGGGTCATCAGCTGGCCAGGGTCCACCTCCTCAAAGCAAACCGTaGACTTCCATGCACGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GATQRPAASGSSAGQGPPPQSKP*TSMHES Trigger: GGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGG...AGGTGGACCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTTGGGCCTCCTGGGGCTTTCTTGGCCCTGCGGGAAGGACCAATTTGGCTTGCACTGGCTCTCACTaGAAGGTGGTGGTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSWASWGFLGPAGRTNLACTGSH*KVVVSE Trigger: CTCCGACACCACCACCTTTCAGTGAGAGCCAGTGCA...AGCCAAATTGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAGGCCCAAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCCACACAGAGACCTGCAGCCTCCGGGTCATCAGCTGGCCAGGGTCCACCTCCCTTCCACCGAAGATaGTGCAGGTGTGATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GATQRPAASGSSAGQGPPPFHRR*CRCDFS Trigger: ACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGG...AGGTGGACCCTGGCCAGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGGGTGCCTAGGTGCCACACAGAGACCTGCAGCCTCCGGGTCATCAGCTAAGATGCTGCAGGTGTaGTTTCAGTTTCCGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGCLGATQRPAASGSSAKMLQV*FQFPDP Trigger: AGGGTCCGGAAACTGAAATCACACCTGCAGCATCTT...AGCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCTGACTGGCTCCGCCTCTCCGTGTGTCCCACACACTGCCTGGGGTCCAAAGATGCTGCAGGTGTaGTTTCAGTTTCCGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCLTGSASPCVPHTAWGPKMLQV*FQFPDP Trigger: AGGGTCCGGAAACTGAAATCACACCTGCAGCATCTT...TGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGCGGAGCCAGTCAGACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | ACCCATCTCTGTGCAGGTGCTGTTGATGTCACGTGTCTCAAGCCTCCAGAGAAGAACACACGCGGTGGCTaGAGCCCTGACACACGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: THLCAGAVDVTCLKPPEKNTRGG*SPDTRP Trigger: GGGCCGTGTGTCAGGGCTGCAGCCACCGCGTGTGTT...CTTCTCTGGAGGCTTGAGACACGTGACATCAACAGCACCTGCACAGAGATGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR GCA 90 bp | GCCATGATCCCACTTCCTGTTGACCTTTGTGGGTTCGCAGTCGCCTTGGGCTTCTGCCACACAGAGACCTaGAGCCTCCGGGTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AMIPLPVDLCGFAVALGFCHTET*SLRVIS Trigger: GCTGATGACCCGGAGGCTGCAGGTCTCTGTGTGGCA...GAAGCCCAAGGCGACTGCGAACCCACAAAGGTCAACAGGAAGTGGGATCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | GCCATGATCCCACTTCCTGTTGACCTTTGTGGGTTCGCAGTCGCCTTGGGCTTCGCAAGGGTGCCTAGGTaGCACACAGAGACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AMIPLPVDLCGFAVALGFARVPR*HTETCS Trigger: GCTGCAGGTCTCTGTGTGGCACCTAGGCACCCTTGC...GAAGCCCAAGGCGACTGCGAACCCACAAAGGTCAACAGGAAGTGGGATCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGAACACACGCGGTGGCTaGAGCCCTGACACACGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSVLLQNRVGRVFGIFLMNTRGG*SPDTRP Trigger: GGGCCGTGTGTCAGGGCTGCAGCCACCGCGTGTGTT...CATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGCAGGTGCTGTTGATGTCACGTGTCTCAAGCCTCCAGAGAAGACAGCGAGGCCCAGAGCCCGCTaGCAACGTGCACAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCAGAVDVTCLKPPEKTARPRAR*QRAQHF Trigger: AAAGTGCTGTGCACGTTGCCAGCGGGCTCTGGGCCT...CGCTGTCTTCTCTGGAGGCTTGAGACACGTGACATCAACAGCACCTGCACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR CCA 90 bp | CACTGGCTCTCACTGAAAGGTGGTGGTGTCGGAGGGACCACAGAGATTTTGCTCAGGCCCAGAGCCCGCTaGCAACGTGCACAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HWLSLKGGGVGGTTEILLRPRAR*QRAQHF Trigger: AAAGTGCTGTGCACGTTGCCAGCGGGCTCTGGGCCT...GAGCAAAATCTCTGTGGTCCCTCCGACACCACCACCTTTCAGTGAGAGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCTTGTCATTCTGGGACTTaGAGAGCTCCTGCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQRRQRCVSDWTGECLACHSGT*RAPAGA Trigger: AGCTCCAGCAGGAGCTCTCCAAGTCCCAGAATGACA...AGCAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162635.8 |
||
| 3UTR CAA 72 bp | AGAATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTaGACTGCAGTGTCTGACTGGCTCCGCCTCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RISGVLAFLEVT*TAVSDWLRLSV Trigger: CACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGATATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CAA 72 bp | AGGGACCACAGAGATTTTGCTCAGCCTCTGATAAGATaGCAGGAGCTTTGCCCCAGCGGTCTCGCGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDHRDFAQPLIR*QELCPSGLASA Trigger: GGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTGAGCAAAATCTCTGTGGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTGGCTCCGCAAGATGCTGCAGGTGTaGTTTCAGTTTCCGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVLAFLEVTLTAVSDWLRKMLQV*FQFPDP Trigger: AGGGTCCGGAAACTGAAATCACACCTGCAGCATCTT...GCGGAGCCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR TCA 90 bp | GACGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGCACTGGCTCTCACTaGAAGGTGGTGGTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGGVSCFKTGSGGCLGSSCTGSH*KVVVSE Trigger: CTCCGACACCACCACCTTTCAGTGAGAGCCAGTGCA...AGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCCCCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGATCCCACTTCCTGTTGACCTTTGTGGGTTCGCAGTCGCCTTGGGCTTCACTGCCTGGGGTCCATaGCCAGAAGATGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMIPLPVDLCGFAVALGFTAWGP*PEDASQ Trigger: CTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGT...GAAGCCCAAGGCGACTGCGAACCCACAAAGGTCAACAGGAAGTGGGATCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | GCCATGATCCCACTTCCTGTTGACCTTTGTGGGTTCGCAGTCGCCTTGGGCTTCTCCACAGGTTTGGGCTaGAGAGGACTCTGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AMIPLPVDLCGFAVALGFSTGLG*RGLCAT Trigger: AGTGGCACAGAGTCCTCTCCAGCCCAAACCTGTGGA...GAAGCCCAAGGCGACTGCGAACCCACAAAGGTCAACAGGAAGTGGGATCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTACGCAGCACCTCCCTTTaGACCAAGCCTGGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SEHFHIYLLTVASPTAWVRSTSL*TKPGFP Trigger: GGGGAAGCCAGGCTTGGTTCAAAGGGAGGTGCTGCG...TACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGTGTTTGGGATCTTCTTGATGGAATGCTTTCAGAATATCGGGTGTGCTAACACACGCGGTGGCTaGAGCCCTGACACACGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVFGIFLMECFQNIGCANTRGG*SPDTRP Trigger: GGGCCGTGTGTCAGGGCTGCAGCCACCGCGTGTGTT...AGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTACCCTCCGGGCAAGGGTaGCTAGGTGCCACACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHFHIYLLTVASPTAWVPSGQG*LGATQR Trigger: TCTCTGTGTGGCACCTAGGCACCCTTGCCCGGAGGG...TACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | GCGTGTTCTTTTGGACTCGTGTCTTGCGTTTTCCCTGAGAAGACCTGTCAGGCAAGGCCCAGAGCCCGCTaGCAACGTGCACAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ACSFGLVSCVFPEKTCQARPRAR*QRAQHF Trigger: AAAGTGCTGTGCACGTTGCCAGCGGGCTCTGGGCCT...TGCCTGACAGGTCTTCTCAGGGAAAACGCAAGACACGAGTCCAAAAGAACACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| 3UTR CAA 72 bp | AGATTTTGCTCAGCCTCTGATAAGATTGCAGGAGCTTaGCCCCAGCGGTCTCGCGTCGGCCTGCAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFCSASDKIAGA*PQRSRVGLQLE Trigger: TTCCAACTGCAGGCCGACGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTGAGCAAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTAGTTGACTGCAGTGTCTaGCTGGCTCCGCCTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEHFHIYLLTVASPTAWVVDCSV*LAPPLR Trigger: ACGGAGAGGCGGAGCCAGTCAGACACTGCAGTCAAC...TACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCTTCAAAACAGGGTCCCTTCCACCGAAGATaGTGCAGGTGTGATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRCVSDWTGECLASKQGPFHRR*CRCDFS Trigger: ACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGG...ACCCTGTTTTGAAGCAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTAGTGTGTCCCACACACTaGCTGGGGTCCATGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHFHIYLLTVASPTAWVVCPTH*LGSMAR Trigger: TCTGGCCATGGACCCCAGGCAGTGTGTGGGACACAC...TACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTACGCTGTGTGTCGGACTaGACGGGGGAGTGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEHFHIYLLTVASPTAWVRCVSD*TGECLA Trigger: AGCAAGACACTCCCCCGTCCAGTCCGACACACAGCG...TACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCCCGAGCAGACGGTCGTTCATACCAAAGATGGCCTGGTCCCAGACAGTCACTCTCACTTTCACAATaGGTCACATGCCTTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRADGRSYQRWPGPRQSLSLSQ*VTCLCG Trigger: CCCGCAAAGGCATGTGACCCATTGTGAAAGTGAGAG...TGACTGTCTGGGACCAGGCCATCTTTGGTATGAACGACCGTCTGCTCGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTTAAAGTCCCACATGGCCAGTGGAAGGATCACTTCTCCGAGGAACACCCCTCAAAGCAAACCGTaGACTTCCATGCACGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSHMASGRITSPRNTPQSKP*TSMHES Trigger: GGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGG...GGTGTTCCTCGGAGAAGTGATCCTTCCACTGGCCATGTGGGACTTTAAGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTCACTGGGGACAAGCCTaGTTCTTCAGGACTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRTFPHLSVDSSLPDCLGHWGQA*FFRTGD Trigger: GTCCCCAGTCCTGAAGAAGCAGGCTTGTCCCCAGTG...ACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCTGGACCACAGAGATTTTaGTGCAGTTGGAAATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQRRQRCVSDWTGECLAGPQRF*CSWKFP Trigger: AGGAAATTTCCAACTGCAGCAAAATCTCTGTGGTCC...AGCAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCGTGTGTCCCACACACTGCCTGGGGTCCATGGCCAGAAGATGCTTCTTTAAATCCTCTGAAGTaGCCAAGTTCCTGTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASPCVPHTAWGPWPEDASLNPLK*PSSCNL Trigger: CAGGTTACAGGAACTTGGCCACTTCAGAGGATTTAA...AGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTGGGACACACGGAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR GCA 90 bp | ATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTGGCCCTTTCCTCCTCGGTaGTTTGAACAGTTTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISGVLAFLEVTLTAVSDWPFPPR*FEQFDH Trigger: GTGATCAAACTGTTCAAAGCACCGAGGAGGAAAGGG...CCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | GGACGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCCCACAGAGATTTTGCTaGAGTTGGAAATTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSVLLQNRVGRVFGIFPQRFC*SWKFPG Trigger: GCCAGGAAATTTCCAACTGCAGCAAAATCTCTGTGG...GAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCCCCGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR CCA 90 bp | GAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGTCCCACATGGCCAGTaGAAGGATCACTTCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EIRTFPHLSVDSSLPDCLVPHGQ*KDHFSE Trigger: CTCGGAGAAGTGATCCTTCCACTGGCCATGTGGGAC...CAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | TCGGACTGGACGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGAGATTTTGCTGCAGTTaGAAATTTCCTGGCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDWTGECLASKQGREGVWRFCCS*KFPGSF Trigger: GAACGAGCCAGGAAATTTCCAACTGCAGCAAAATCT...CCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCCCCGTCCAGTCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR TCA 90 bp | GATGGCCTGGTCCCAGACAGTCAGCTCCAAGGTGGACTGTCTCAGCTGAGAACTACCATTCTCCGGTTTTaGTTTTCACGTTTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGLVPDSQLQGGLSQLRTTILRF*FSRFCP Trigger: AGGACAGAAACGTGAAAATCAAAACCGGAGAATGGT...AGTTCTCAGCTGAGACAGTCCACCTTGGAGCTGACTGTCTGGGACCAGGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | GAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGCGTATTTCTCAGCCTTaGCCCGCAGAGGATACCATC | + |
|
Preference number: 4 (lower is better) Translates to: EIRTFPHLSVDSSLPDCLRISQP*PAEDTI Trigger: GATGGTATCCTCTGCGGGCCAAGGCTGAGAAATACG...CAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTATACCAAAGATGGCCTaGTCCCAGACAGTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRTFPHLSVDSSLPDCLGIPKMA*SQTVSS Trigger: GGAGCTGACTGTCTGGGACCAGGCCATCTTTGGTAT...ACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR CAA 72 bp | CAAGGTTTCCTCGAAAGTCGGGTCCAGCGTGTTCTTTaGGACTCGTGTCTTGCGTTTTCCCTGAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QGFLESRVQRVL*DSCLAFSLRRP Trigger: AGGTCTTCTCAGGGAAAACGCAAGACACGAGTCCAAAAGAACACGCTGGACCCGACTTTCGAGGAAACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGCGTGTTCTTTTGGACTCGTGTCTTGCGTTTTCCCTGAGAAGACCTGTCCCTTTCCTCCTCGGTaGTTTGAACAGTTTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPACSFGLVSCVFPEKTCPFPPR*FEQFDH Trigger: GTGATCAAACTGTTCAAAGCACCGAGGAGGAAAGGG...ACAGGTCTTCTCAGGGAAAACGCAAGACACGAGTCCAAAAGAACACGCTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCTCCTGGGGCTTTCTTaGCCCTGCGGGAAGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERLLRSEHFHIYLLTVASLLGLS*PCGKDQ Trigger: TTGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAG...GGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTACACGCAGCTTTTGTTaGTTTGGCAGGGTGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IRTFPHLSVDSSLPDCLGTRSFC*FGRVRQ Trigger: CTGTCTCACCCTGCCAAACCAACAAAAGCTGCGTGT...ACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | AGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGCGTTCATACCAAAGATaGCCTGGTCCCAGACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSEHFHIYLLTVASPTAWRSYQR*PGPRQS Trigger: TGACTGTCTGGGACCAGGCCATCTTTGGTATGAACG...CCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| 3UTR CAA 72 bp | CTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTaGATGGAATGCTTTCAGAATATCGGGTGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNRVGRVFGIF*MECFQNIGCAG Trigger: GCCAGCACACCCGATATTCTGAAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTACCTTCTTGGGCCTCCTaGGGCTTTCTTGGCCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVERLLRSEHFHIYLLTVPSWAS*GFLGPA Trigger: CGCAGGGCCAAGAAAGCCCCAGGAGGCCCAAGAAGG...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCGTCTGTCCACAGGTTTaGGCTGGAGAGGACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERLLRSEHFHIYLLTVASVCPQV*AGEDSV Trigger: CACAGAGTCCTCTCCAGCCCAAACCTGTGGACAGAC...GGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGTGACATTAGCATTGTCAAAATTACCCATCTCTGTGCAGGTGCTGTTGCCCTTTCCTCCTCGGTaGTTTGAACAGTTTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTLALSKLPISVQVLLPFPPR*FEQFDH Trigger: GTGATCAAACTGTTCAAAGCACCGAGGAGGAAAGGG...CAACAGCACCTGCACAGAGATGGGTAATTTTGACAATGCTAATGTCACTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGGGTGGTGACAGACAGAAACAAGTTTTCCACAGACTTATTAAATCCTCTTCACAATGGGTCACATaGCTTTGCGGGCTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLGGDRQKQVFHRLIKSSSQWVT*LCGLSS Trigger: TGAGGACAGCCCGCAAAGGCATGTGACCCATTGTGA...AGAGGATTTAATAAGTCTGTGGAAAACTTGTTTCTGTCTGTCACCACCCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTACCTTTGAACCAAGCCTaGCTTCCCCGAGCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVERLLRSEHFHIYLLTVPLNQA*LPRADG Trigger: ACCGTCTGCTCGGGGAAGCCAGGCTTGGTTCAAAGG...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR TCA 90 bp | TTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGGAATGCTTTACCATTCTCCGGTTTTaGTTTTCACGTTTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQNRVGRVFGIFLMECFTILRF*FSRFCP Trigger: AGGACAGAAACGTGAAAATCAAAACCGGAGAATGGT...AAAGCATTCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000162635.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGTGTTTGGGATCTTCTTaGTGGAATGCTTTCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: EIRTFPHLSVDSSLPDCLCLGSS*WNAFRI Trigger: TATTCTGAAAGCATTCCATCAAGAAGATCCCAAACA...CAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR GCA 90 bp | AGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGATCTTCTTGATGGAATaGTTTCAGAATATCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSEHFHIYLLTVASPTAWIFLME*FQNIGC Trigger: ACACCCGATATTCTGAAAGCATTCCATCAAGAAGAT...CCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAATTCTATTTCTCCAGTGACATTAGCATTGTCAAAATTACCCATCTCTGTCTGGAGCTGCTGCACTaGCTCTCACTGAAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKFYFSSDISIVKITHLCLELLH*LSLKGG Trigger: ACCACCTTTCAGTGAGAGCCAGTGCAGCAGCTCCAG...ACAGAGATGGGTAATTTTGACAATGCTAATGTCACTGGAGAAATAGAATTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115763.10 ENSMUST00000162635.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAAAGGAGTGTTTCCACTaGGGACAAGCCTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVERLLRSEHFHIYLLTVKECFH*GQACFF Trigger: GAAGAAGCAGGCTTGTCCCCAGTGGAAACACTCCTT...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTATCACCGGTAAATTCTTaGCTCCCAACACAACCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVERLLRSEHFHIYLLTVSPVNS*LPTQPD Trigger: GTCTGGTTGTGTTGGGAGCCAAGAATTTACCGGTGA...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGGTTCTTACAGGTCTTaGTGCATATCTCTAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVERLLRSEHFHIYLLTVGSYRS*CISLKS Trigger: GCTCTTTAGAGATATGCATCAAGACCTGTAAGAACC...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CAA 90 bp | GCCATGATCCCACTTCCTGTTGACCTTTGTGGGTTCGCAGTCGCCTTGGGCTTCCCTCCTGGGGCTTTCTaGGCCCTGCGGGAAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: AMIPLPVDLCGFAVALGFPPGAF*ALREGP Trigger: TGGTCCTTCCCGCAGGGCCAAGAAAGCCCCAGGAGG...GAAGCCCAAGGCGACTGCGAACCCACAAAGGTCAACAGGAAGTGGGATCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS GCA 90 bp | CACATGCCTTTGCGGGCTGTCCTCAAAGCAAACCGTGCACTTCCATaGACGAGTCCTCCGCAGGAACACACGGCACTCGGAACACACGCG | + |
|
Preference number: 5 (lower is better) Translates to: HMPLRAVLKANRALP*TSPPQEHTALGTHA Trigger: CGCGTGTGTTCCGAGTGCCGTGTGTTCCTGCGGAGGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGGACAGCCCGCAAAGGCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS CCA 90 bp | CCCAGAGCCCGCTGGCAACGTGCACAGCACTTTTCCTTGTATTCCTaGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATGCTGCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRARWQRAQHFSLYS*LELFAPFHRRCCRC Trigger: ACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCAGGAATACAAGGAAAAGTGCTGTGCACGTTGCCAGCGGGCTCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | GGACGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTCCCGTTCCAACTCCTaGAAGGACTCCAGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GRGSVLLQNRVGRVFGIFSRSNS*KDSRST Trigger: AGTGGACCTGGAGTCCTTCAAGGAGTTGGAACGGGA...GAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCCCCGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS TCA 90 bp | CTGGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATGCTGCAGGTGTaGTTTCAGTTTCCGGACCCTTTCCTCCTCGGTGCTTTGAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LARALRPLPPKMLQV*FQFPDPFLLGALNS Trigger: ACTGTTCAAAGCACCGAGGAGGAAAGGGTCCGGAAACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS GCA 90 bp | TCCTTGTATTCCTGGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATaGTGCAGGTGTGATTTCAGTTTCCGGACCCTTTCCTCCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYSWLELFAPFHRR*CRCDFSFRTLSSSV Trigger: CACCGAGGAGGAAAGGGTCCGGAAACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCAGGAATACAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCGCTGTGTGTCGGACTGGACGGGGGAGTGTCTTGCTTCAAAACAGGGTCGGCACAGCACTTTTCCTaGTATTCCTGGCTAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TALCVGLDGGVSCFKTGSAQHFS*YSWLEL Trigger: GAGCTCTAGCCAGGAATACAAGGAAAAGTGCTGTGC...CGACCCTGTTTTGAAGCAAGACACTCCCCCGTCCAGTCCGACACACAGCGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | ATATCGGGTGTGCTGGCCTTCCTGGAAGTCACGTTGACTGCAGTGTCTGACTGGCAGCCTCTGATAAGATaGCAGGAGCTTTGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISGVLAFLEVTLTAVSDWQPLIR*QELCPS Trigger: GCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTG...CCAGTCAGACACTGCAGTCAACGTGACTTCCAGGAAGGCCAGCACACCCGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | GAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGCCGCAGCACCTCCCTTaGAACCAAGCCTGGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EIRTFPHLSVDSSLPDCLPQHLP*NQAWLP Trigger: GGGAAGCCAGGCTTGGTTCAAAGGGAGGTGCTGCGG...CAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS GCA 90 bp | TTGTATTCCTGGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATGCTaGAGGTGTGATTTCAGTTTCCGGACCCTTTCCTCCTCGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYSWLELFAPFHRRC*RCDFSFRTLSSSVL Trigger: AAGCACCGAGGAGGAAAGGGTCCGGAAACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCAGGAATACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS GCA 90 bp | TTTGATTTTCACGTTTCTGTCCTCAAAGCAAACCGTGCACTTCCATaGACGAGTCCTCCGCAGGAACACACGGCACTCGGAACACACGCG | + |
|
Preference number: 5 (lower is better) Translates to: FDFHVSVLKANRALP*TSPPQEHTALGTHA Trigger: CGCGTGTGTTCCGAGTGCCGTGTGTTCCTGCGGAGGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGGACAGAAACGTGAAAATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGTCCCGTTCCAACTCCTaGAAGGACTCCAGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GSVLLQNRVGRVFGIFLMSRSNS*KDSRST Trigger: AGTGGACCTGGAGTCCTTCAAGGAGTTGGAACGGGA...CATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGCTTCCGTGTCTCAAGCCTCCAGAGAAGACAGCGCTGTGTGTCGGACTGGGCACAGCACTTTTCCTaGTATTCCTGGCTAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFRVSSLQRRQRCVSDWAQHFS*YSWLEL Trigger: GAGCTCTAGCCAGGAATACAAGGAAAAGTGCTGTGC...CCAGTCCGACACACAGCGCTGTCTTCTCTGGAGGCTTGAGACACGGAAGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGGACTTGGAGAGCTTTCTCATCTGGGTGGTGACAGACAGAAACAAGTTTCCCGTTCCAACTCCTaGAAGGACTCCAGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILGLGELSHLGGDRQKQVSRSNS*KDSRST Trigger: AGTGGACCTGGAGTCCTTCAAGGAGTTGGAACGGGA...AACTTGTTTCTGTCTGTCACCACCCAGATGAGAAAGCTCTCCAAGTCCCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS-3UTR CAA 90 bp | CACACACTGCCTGGGGTCCATGGCCAGAAGATGCTTCTCAGAGGTCATGTCATTGAGATTTTGCTGCAGTaGGAAATTTCCTGGCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HTLPGVHGQKMLLRGHVIEILLQ*EISWLV Trigger: AACGAGCCAGGAAATTTCCAACTGCAGCAAAATCTC...AATGACATGACCTCTGAGAAGCATCTTCTGGCCATGGACCCCAGGCAGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR CAA 90 bp | GAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGTCTGTGCAGGTGCTGTaGATGCTAATTAAGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EIRTFPHLSVDSSLPDCLSVQVL*MLIKLP Trigger: CGGAAGCTTAATTAGCATCAACAGCACCTGCACAGA...CAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGTCTTGCTTCAAAACAGGGTCGGGAGGGTGTTTGGGATCTTCTTGATGGAGGGACCACAGAGATTTaGCTGCAGTTGGAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ECLASKQGREGVWDLLDGGTTEI*LQLEIS Trigger: GGAAATTTCCAACTGCAGCAAAATCTCTGTGGTCCC...TCCATCAAGAAGATCCCAAACACCCTCCCGACCCTGTTTTGAAGCAAGACACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
||
| CDS-3UTR CAA 90 bp | GCAAGGTTCTTACAGGTCTTGATGCATATCTCTAAAGAGCAGCTTTTAACGCAGATGTCATTCTGGGACTaGGAGAGCTCCTGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARFLQVLMHISKEQLLTQMSFWD*ESSCWS Trigger: GCTCCAGCAGGAGCTCTCCAAGTCCCAGAATGACAT...CTGCGTTAAAAGCTGCTCTTTAGAGATATGCATCAAGACCTGTAAGAACCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162635.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGTGTCTGATTCTGCCATGATCCCACTTCCTGTTGACCTTTGTGGGTTCAGGTTCTTACAGGTCTaGATGCATATCTCTAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVSDSAMIPLPVDLCGFRFLQV*MHISKE Trigger: CTCTTTAGAGATATGCATCAAGACCTGTAAGAACCT...GAACCCACAAAGGTCAACAGGAAGTGGGATCATGGCAGAATCAGACACACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CAA 90 bp | ATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCGACTGCCTGGGTGTCTTGACATACGGATaGCACTTTCTTTTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRTFPHLSVDSSLPDCLGVLTYG*HFLFFS Trigger: AGAAAAGAAAAGAAAGTGCAATCCGTATGTCAAGAC...ACCCAGGCAGTCGGGGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTATGTCTGTCCACAGGTTaGGGCTGGAGAGGACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVERLLRSEHFHIYLLTVCLSTG*GWRGLC Trigger: ACAGAGTCCTCTCCAGCCCAAACCTGTGGACAGACA...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CAA 90 bp | GAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGCCTCCCCAGTGACATTAGCATaGTCAAAATTACCCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERLLRSEHFHIYLLTVASPVTLA*SKLPIS Trigger: AGAGATGGGTAATTTTGACAATGCTAATGTCACTGG...GGAGGCTACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTTGAGCGTTTATTGAGATCAGAACATTTCCACATCTATCTGTTGACAGTAGTGTTTGGGATCTTCTaGATGGAATGCTTTCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVERLLRSEHFHIYLLTVVFGIF*MECFQN Trigger: ATTCTGAAAGCATTCCATCAAGAAGATCCCAAACAC...TACTGTCAACAGATAGATGTGGAAATGTTCTGATCTCAATAAACGCTCAACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160483.9 |
||
| CDS GCA 72 bp | GCAGGAACACACGGCACTCGGAACACACGCGGTGGCTaGAGCCCTGACACACGGCCCCACGGTTCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AGTHGTRNTRGG*SPDTRPHGSAE Trigger: TTCTGCTGAACCGTGGGGCCGTGTGTCAGGGCTGCAGCCACCGCGTGTGTTCCGAGTGCCGTGTGTTCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS CCA 72 bp | CTGGGACTTGGAGAGCTCCTGCTGGAGCTGCTGCACTaGCTCTCACTGAAAGGTGGTGGTGTCGGAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LGLGELLLELLH*LSLKGGGVGGT Trigger: GGTCCCTCCGACACCACCACCTTTCAGTGAGAGCCAGTGCAGCAGCTCCAGCAGGAGCTCTCCAAGTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162635.8 |
||
| CDS GCA 72 bp | TTGCGGGCTGTCCTCAAAGCAAACCGTGCACTTCCATaGACGAGTCCTCCGCAGGAACACACGGCACTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LRAVLKANRALP*TSPPQEHTALG Trigger: TCCGAGTGCCGTGTGTTCCTGCGGAGGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGGACAGCCCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
||
| CDS CAA 90 bp | AGCAGAAGGCCCAGAGCCCGCTGGCAACGTGCACAGCACTTTTCCTaGTATTCCTGGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRPRARWQRAQHFS*YSWLELFAPFHRRC Trigger: GCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCAGGAATACAAGGAAAAGTGCTGTGCACGTTGCCAGCGGGCTCTGGGCCTTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS TCA 72 bp | GCTCTTCGCCCCCTTCCACCGAAGATGCTGCAGGTGTaGTTTCAGTTTCCGGACCCTTTCCTCCTCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALRPLPPKMLQV*FQFPDPFLLGA Trigger: AGCACCGAGGAGGAAAGGGTCCGGAAACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS GCA 72 bp | TGGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATGCTaGAGGTGTGATTTCAGTTTCCGGACCCTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLELFAPFHRRC*RCDFSFRTLSS Trigger: GGAGGAAAGGGTCCGGAAACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS GCA 72 bp | TCCTGGCTAGAGCTCTTCGCCCCCTTCCACCGAAGATaGTGCAGGTGTGATTTCAGTTTCCGGACCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWLELFAPFHRR*CRCDFSFRTLS Trigger: GGAAAGGGTCCGGAAACTGAAATCACACCTGCAGCATCTTCGGTGGAAGGGGGCGAAGAGCTCTAGCCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS GCA 72 bp | ACGGTTCAGCAGAAGGCCCAGAGCCCGCTGGCAACGTaGACAGCACTTTTCCTTGTATTCCTGGCTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVQQKAQSPLAT*TALFLVFLARA Trigger: AGCTCTAGCCAGGAATACAAGGAAAAGTGCTGTGCACGTTGCCAGCGGGCTCTGGGCCTTCTGCTGAACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000159394.8 ENSMUST00000162635.8 |
||
| CDS GCA 72 bp | CACGTTTCTGTCCTCAAAGCAAACCGTGCACTTCCATaGACGAGTCCTCCGCAGGAACACACGGCACTCGGA | + |
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Preference number: 6 (lower is better) Translates to: HVSVLKANRALP*TSPPQEHTALG Trigger: TCCGAGTGCCGTGTGTTCCTGCGGAGGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGGACAGAAACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000162635.8 |
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| CDS GCA 72 bp | TCACATGCCTTTGCGGGCTGTCCTCAAAGCAAACCGTaGACTTCCATGCACGAGTCCTCCGCAGGAACACAC | + |
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Preference number: 6 (lower is better) Translates to: SHAFAGCPQSKP*TSMHESSAGTH Trigger: GTGTGTTCCTGCGGAGGACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGGACAGCCCGCAAAGGCATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| CDS CAA 72 bp | CTGAAAGGTGGTGGTGTCGGAGGGACCACAGAGATTTaGCTGCAGTTGGAAATTTCCTGGCTCGTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LKGGGVGGTTEI*LQLEISWLVLQ Trigger: TTGAAGAACGAGCCAGGAAATTTCCAACTGCAGCAAAATCTCTGTGGTCCCTCCGACACCACCACCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
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| CDS CAA 72 bp | ATGACATCTCTCACTTTCACAATGGGTCACATGCCTTaGCGGGCTGTCCTCAAAGCAAACCGTGCACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: MTSLTFTMGHMP*RAVLKANRALP Trigger: TGGAAGTGCACGGTTTGCTTTGAGGACAGCCCGCAAAGGCATGTGACCCATTGTGAAAGTGAGAGATGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| CDS CAA 90 bp | TGGCTCTCACTGAAAGGTGGTGGTGTCGGAGGGACCACAGAGATTTaGCTGCAGTTGGAAATTTCCTGGCTCGTTCTTCAAAGAACCATT | + |
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Preference number: 6 (lower is better) Translates to: WLSLKGGGVGGTTEI*LQLEISWLVLQRTI Trigger: AATGGTTCTTTGAAGAACGAGCCAGGAAATTTCCAACTGCAGCAAAATCTCTGTGGTCCCTCCGACACCACCACCTTTCAGTGAGAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
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| CDS CAA 90 bp | AGATCGAATATGACATCTCTCACTTTCACAATGGGTCACATGCCTTaGCGGGCTGTCCTCAAAGCAAACCGTGCACTTCCATGCACGAGT | + |
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Preference number: 6 (lower is better) Translates to: RSNMTSLTFTMGHMP*RAVLKANRALPCTS Trigger: ACTCGTGCATGGAAGTGCACGGTTTGCTTTGAGGACAGCCCGCAAAGGCATGTGACCCATTGTGAAAGTGAGAGATGTCATATTCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| CDS CCA 72 bp | GTGGTGTCGGAGGGACCACAGAGATTTTGCTGCAGTTaGAAATTTCCTGGCTCGTTCTTCAAAGAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: VVSEGPQRFCCS*KFPGSFFKEPF Trigger: GAATGGTTCTTTGAAGAACGAGCCAGGAAATTTCCAACTGCAGCAAAATCTCTGTGGTCCCTCCGACACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115763.10 |
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| CDS TCA 72 bp | GATGACTGGTCCTTCCTCACAGAGGAAGATCGAATATaGCATCTCTCACTTTCACAATGGGTCACATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: DDWSFLTEEDRI*HLSLSQWVTCL Trigger: AAGGCATGTGACCCATTGTGAAAGTGAGAGATGTCATATTCGATCTTCCTCTGTGAGGAAGGACCAGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159394.8 |
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| CDS CAA 72 bp | TTCCTGGCTCGTTCTTCAAAGAACCATTCTCCGGTTTaGATTTTCACGTTTCTGTCCTCAAAGCAAACCGTG | + |
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Preference number: 6 (lower is better) Translates to: FLARSSKNHSPV*IFTFLSSKQTV Trigger: CACGGTTTGCTTTGAGGACAGAAACGTGAAAATCAAAACCGGAGAATGGTTCTTTGAAGAACGAGCCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097430.10 ENSMUST00000115763.10 ENSMUST00000162635.8 |
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