RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYTL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030616

Ensembl transcript IDs: ENSMUST00000098310.10, ENSMUST00000107210.3, ENSMUST00000107211.8, ENSMUST00000190365.8, ENSMUST00000190731.7, ENSMUST00000190837.7, ENSMUST00000207578.2, ENSMUST00000208720.2, ENSMUST00000239078.2

Found 975 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGCAGCCAGTAGGTGGCACCAAAGTCCATTTGAGACTGAGAAGGTaGGGTTACAGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGA +
Preference number: 1 (lower is better)
Translates to: MQPVGGTKVHLRLRR*GYRSPGVCGISQGR
Trigger: TCTGCCTTGAGAAATCCCACACACACCCGGACTCCTGTAACCTCACCTTCTCAGTCTCAAATGGACTTTGGTGCCACCTACTGGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR TCA 90 bp GAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTaGAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTA +
Preference number: 1 (lower is better)
Translates to: ESGCVWDFSRQIYEQ*SQSYCPNMEFNVSL
Trigger: TAATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR CAA 90 bp CACCGCTGTCCTTTCTCTCTCCACCCCATCCCAGGAGTTTCCTCATaGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTT +
Preference number: 2 (lower is better)
Translates to: HRCPFSLHPIPGVSS*LCPKPSYLEAQQAF
Trigger: AAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGGATGGGGTGGAGAGAGAAAGGACAGCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGAGGGTATTTGTCCATaGGGCCAACTCTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: TFLLRSPASISITKRQACEGICP*GQLSSS
Trigger: TGAACTGGAGAGTTGGCCTCATGGACAAATACCCTC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR CAA 90 bp TGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTaGAATGTCGGCATCACGCCACACTTCTTCTGGGCCGTACATCTT +
Preference number: 2 (lower is better)
Translates to: CGSNSSVFLACSTLS*NVGITPHFFWAVHL
Trigger: AAGATGTACGGCCCAGAAGAAGTGTGGCGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR CAA 90 bp CTGTCCTTTCTCTCTCCACCCCATCCCAGGAGTTTCCTCATTGCTTaGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATA +
Preference number: 2 (lower is better)
Translates to: LSFLSPPHPRSFLIA*PKTFLLRSPASISI
Trigger: TATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGGATGGGGTGGAGAGAGAAAGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCAGGAGTTTCCTCATTaGTTTGCCCAAAACCTTCTT +
Preference number: 2 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVQEFPH*FAQNLL
Trigger: AAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGAGGGTATTTGTCCATaGGGCCAACTCTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHEGICP*GQLSSS
Trigger: TGAACTGGAGAGTTGGCCTCATGGACAAATACCCTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGTGCAACCAAAGAAATaGATGCAGATTAAGTTGAGC +
Preference number: 2 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVVQPKK*MQIKLS
Trigger: GCTCAACTTAATCTGCATGCATTTCTTTGGTTGCAC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR CAA 90 bp CTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTaGTTCAACTCTCTCCTTGAATGTCGGCATCACGCCACACTTCTT +
Preference number: 2 (lower is better)
Translates to: LAFSLVWKQQFSFPS*FNSLLECRHHATLL
Trigger: AAGAAGTGTGGCGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGTGCAACCAAAGAAATaGATGCAGATTAAGTTGAGC +
Preference number: 2 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAVQPKK*MQIKLS
Trigger: GCTCAACTTAATCTGCATGCATTTCTTTGGTTGCAC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGAGGGTATTTGTCCATaGGGCCAACTCTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFEGICP*GQLSSS
Trigger: TGAACTGGAGAGTTGGCCTCATGGACAAATACCCTC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGCTTTTTCTTTGGTGTaGAAGCAACAGTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: TFLLRSPASISITKRQACAFSLV*KQQFSF
Trigger: AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR CAA 90 bp TGCAACACGGATTGTGGTAGGAAACATGTGAAGCTAGCTTTTTCTTaGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCT +
Preference number: 2 (lower is better)
Translates to: CNTDCGRKHVKLAFS*VWKQQFSFPSLFNS
Trigger: AGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCTACCACAATCCGTGTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGAGGGTATTTGTCCATaGGGCCAACTCTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHEGICP*GQLSSS
Trigger: TGAACTGGAGAGTTGGCCTCATGGACAAATACCCTC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGTGCAACCAAAGAAATaGATGCAGATTAAGTTGAGC +
Preference number: 2 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFVQPKK*MQIKLS
Trigger: GCTCAACTTAATCTGCATGCATTTCTTTGGTTGCAC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTTTTTCTTTGGTGTaGAAGCAACAGTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: IALPKTFLLRSPASISITAFSLV*KQQFSF
Trigger: AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGTTTCCTCATTGCTTTaGCCAAAACCTTCTTACTTA +
Preference number: 2 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHVSSLL*PKPSYL
Trigger: TAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAAC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR TCA 72 bp AAGTCATTAGTGACAACGGGAGAGGGTATTTGTCCATaGGGCCAACTCTCCAGTTCAGATGCCCCTGGGGCG +
Preference number: 3 (lower is better)
Translates to: KSLVTTGEGICP*GQLSSSDAPGA
Trigger: CGCCCCAGGGGCATCTGAACTGGAGAGTTGGCCTCATGGACAAATACCCTCTCCCGTTGTCACTAATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR TCA 72 bp GTAGGTGGCACCAAAGTCCATTTGAGACTGAGAAGGTaGGGTTACAGGAGTCCGGGTGTGTGTGGGATTTCT +
Preference number: 3 (lower is better)
Translates to: VGGTKVHLRLRR*GYRSPGVCGIS
Trigger: AGAAATCCCACACACACCCGGACTCCTGTAACCTCACCTTCTCAGTCTCAAATGGACTTTGGTGCCACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAAGCTAGCTTTTTCTTaGGTGTGGAAGCAACAGTTC +
Preference number: 3 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVKLAFS*VWKQQF
Trigger: GAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTTCAGTTTTCCTAGCTaGTTCAACTCTCTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVFSFPS*FNSLLE
Trigger: TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAAGCTAGCTTTTTCTTaGGTGTGGAAGCAACAGTTC +
Preference number: 3 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAKLAFS*VWKQQF
Trigger: GAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCATATTATGTAGGTCATaGTCTTCACCGCTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVILCRS*SSPLSF
Trigger: AAAGGACAGCGGTGAAGACAATGACCTACATAATAT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTGCATGCAGATTAAGTaGAGCATGCTTCTAAAAGTC +
Preference number: 3 (lower is better)
Translates to: TFLLRSPASISITKRQACCMQIK*SMLLKV
Trigger: GACTTTTAGAAGCATGCTCAACTTAATCTGCATGCA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTCAGTTTTCCTAGCTaGTTCAACTCTCTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAFSFPS*FNSLLE
Trigger: TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTGCATGCAGATTAAGTaGAGCATGCTTCTAAAAGTC +
Preference number: 3 (lower is better)
Translates to: NSSVFLACSTLSLNVGITCMQIK*SMLLKV
Trigger: GACTTTTAGAAGCATGCTCAACTTAATCTGCATGCA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAAGCTAGCTTTTTCTTaGGTGTGGAAGCAACAGTTC +
Preference number: 3 (lower is better)
Translates to: SFLIALPKTFLLRSPASIKLAFS*VWKQQF
Trigger: GAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR TCA 72 bp TGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTaGAGTCAGTCTTACTGCCCTAACATGGAATTCAAT +
Preference number: 3 (lower is better)
Translates to: CVWDFSRQIYEQ*SQSYCPNMEFN
Trigger: ATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTGCATGCAGATTAAGTaGAGCATGCTTCTAAAAGTC +
Preference number: 3 (lower is better)
Translates to: SFLIALPKTFLLRSPASICMQIK*SMLLKV
Trigger: GACTTTTAGAAGCATGCTCAACTTAATCTGCATGCA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTGCATGCAGATTAAGTaGAGCATGCTTCTAAAAGTC +
Preference number: 3 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHCMQIK*SMLLKV
Trigger: GACTTTTAGAAGCATGCTCAACTTAATCTGCATGCA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGCATGCAGATTAAGTaGAGCATGCTTCTAAAAGTC +
Preference number: 3 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLECMQIK*SMLLKV
Trigger: GACTTTTAGAAGCATGCTCAACTTAATCTGCATGCA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAGCTAGCTTTTTCTTaGGTGTGGAAGCAACAGTTC +
Preference number: 3 (lower is better)
Translates to: IALPKTFLLRSPASISITKLAFS*VWKQQF
Trigger: GAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
3UTR-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTCAGTTTTCCTAGCTaGTTCAACTCTCTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHFSFPS*FNSLLE
Trigger: TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVGSLSP*CWNWSC
Trigger: GCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGTGTCTCTTCTCCCTaGTGCCTGGAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASVSSP*CLELAR
Trigger: CCTTGCCAGCTCCAGGCATCAGGGAGAAGAGACACT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGTGGTCTGCTGTCTGTaGTGGCTCAGGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACVVCCL*WLRLTT
Trigger: TGTGGTGAGCCTGAGCCATCACAGACAGCAGACCAC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSLSPC*WNWSCA
Trigger: AGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACGSLSP*CWNWSC
Trigger: GCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCTGCCCCTCAACAGTaGGAGGTCAAGGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVAAPQQ*EVKAFL
Trigger: AAGGAATGCCTTGACCTCCCACTGTTGAGGGGCAGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCACCAAACTGGAACTTaGGCCTGCGGGATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVHQTGT*ACGICV
Trigger: GACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCCGTGCTGCTGGAACTaGAGTTGCGCTTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVPCCWN*SCALGS
Trigger: GGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAGGGCAGCATCCCTCTaGAGAACCTTTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVRAASL*RTFKMA
Trigger: CGCCATCTTAAAGGTTCTGCAGAGGGATGCTGCCCT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCTTATTCTGCTCAGCTaGCGCTGGGAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVLILLS*RWELLP
Trigger: AGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSLSPC*WNWSCA
Trigger: AGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTGCCCCTCAACAGTaGGAGGTCAAGGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAAAPQQ*EVKAFL
Trigger: AAGGAATGCCTTGACCTCCCACTGTTGAGGGGCAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTGCTCAGCTGCCGCTaGGAGCTTCTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALLSCR*ELLPSH
Trigger: ATGAGAAGGAAGAAGCTCCCAGCGGCAGCTGAGCAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGGGCAGAGACACAGCTaGAGTCCTCGTACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAGQRHS*SPRTFL
Trigger: CAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVLSPCC*NWSCAL
Trigger: TAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTGTGATCTCTCTCTaGTCTGCTGAAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAAVISL*SAEGLW
Trigger: CCACAGTCCTTCAGCAGATCAGAGAGAGATCACAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAGTGTCTCTTCTCCCTaGTGCCTGGAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSVSSP*CLELAR
Trigger: CCTTGCCAGCTCCAGGCATCAGGGAGAAGAGACACT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCATCGCTCTCATCTTaGAGAAATGCTGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSSLSS*RNAGTD
Trigger: GTCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTTCAGGCAGATGTCTaGCTCTCTCCTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACFQADV*LSPLQP
Trigger: GGGCTGAAGAGGAGAGAGTCAGACATCTGCCTGAAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCAGCTTGGGGCTGTTaGATGGATTCTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVAAWGC*MDSSFA
Trigger: AGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCAGGGACATGACTTGTaGCTTCCTGGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITQGHDL*LPGLVC
Trigger: GCACACCAGCCCAGGAAGTCACAAGTCATGTCCCTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGGTGTACCTGCTGTCTaGTCTCTTTCAGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACGVPAV*SLSGSL
Trigger: CAAGCTCCCTGAAAGAGAGCAGACAGCAGGTACACC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCAGGGCAGCATCCCTCTaGAGAACCTTTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACRAASL*RTFKMA
Trigger: CGCCATCTTAAAGGTTCTGCAGAGGGATGCTGCCCT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTTATTCTGCTCAGCTaGCGCTGGGAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALILLS*RWELLP
Trigger: AGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCACCCAGCTCTCCTTTaGCCTCATTGCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACHPALL*PHCCVL
Trigger: AAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCACTGGAACTTGGGCCTaGGGGATCTGTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACTGTWA*GICVIF
Trigger: GAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAACTGGAACTTGGGCCTaGGGGATCTGTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPATGTWA*GICVIF
Trigger: GAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITGSLSP*CWNWSC
Trigger: GCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTCTTTCAGGGAGCTTaGCGTCCACTTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLFQGA*RPLLQL
Trigger: AAGCTGGAGAAGTGGACGCCAAGCTCCCTGAAAGAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTTCTCCCTGATGCCTaGAGCTGGCAAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLLPDA*SWQGPS
Trigger: GGAAGGACCTTGCCAGCTCCAGGCATCAGGGAGAAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTGGCTTTGGGGATTaGAGCTTTGGTATGAGACGC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSGFGD*SFGMRR
Trigger: GCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTTCTCTCTCAGCACTTaGTTCTTGGGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVFSLST*FLGSSL
Trigger: CAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGTGGAAAAGGAGCTGTaGTCTCTCTCTGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAVEKEL*SLSDLL
Trigger: CAGCAGATCAGAGAGAGATCACAGCTCCTTTTCCAC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGTGGAAAAGGAGCTGTaGTCTCTCTCTGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACVEKEL*SLSDLL
Trigger: CAGCAGATCAGAGAGAGATCACAGCTCCTTTTCCAC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTTCCAAGCCAGCCCTaGATTCAGGGTACTGTGACT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACFPSQP*IQGTVT
Trigger: AGTCACAGTACCCTGAATTCAGGGCTGGCTTGGAAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCTGATTATCAGGCAGTaGAGGCACTGTGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVLIIRQ*RHCGNS
Trigger: GGAATTTCCACAGTGCCTTCACTGCCTGATAATCAG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCATCGCTCTCATCTTaGAGAAATGCTGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSSLSS*RNAGTD
Trigger: GTCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCACACCATGGTATGGTTaGAGACGGGGTTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACTPWYG*RRGWWF
Trigger: AAACCACCAACCCCGTCTTCAACCATACCATGGTGT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCAATGGTCCCAGACTGTaGGTTCTACACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACNGPRL*VLHRLP
Trigger: TGGAAGCCTGTGTAGAACTCACAGTCTGGGACCATT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAATGGTCCCAGACTGTaGGTTCTACACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPANGPRL*VLHRLP
Trigger: TGGAAGCCTGTGTAGAACTCACAGTCTGGGACCATT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGTGGTCTGCTGTCTGTaGTGGCTCAGGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHVVCCL*WLRLTT
Trigger: TGTGGTGAGCCTGAGCCATCACAGACAGCAGACCAC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACAGGGACATGACTTGTaGCTTCCTGGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEQGHDL*LPGLVC
Trigger: GCACACCAGCCCAGGAAGTCACAAGTCATGTCCCTG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAACTGCCCAGGGACATaGCTTGTGACTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITNCPGT*LVTSWA
Trigger: AGCCCAGGAAGTCACAAGTCATGTCCCTGGGCAGTT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTGTGTCCTTATTCTaGTCAGCTGCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAVSLF*SAAAGS
Trigger: GCTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGCTGTGTCCTTATTCTaGTCAGCTGCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHAVSLF*SAAAGS
Trigger: GCTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACCWNWS*ALGSLL
Trigger: CAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPACWNWS*ALGSLL
Trigger: CAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSLSPC*WNWSCA
Trigger: AGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIGSLSP*CWNWSC
Trigger: GCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCAGAGAATCTCACGTaGTTTAACGGCTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVAENLT*FNGSSE
Trigger: CTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTTCTCCCTGATGCCTaGAGCTGGCAAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLLPDA*SWQGPS
Trigger: GGAAGGACCTTGCCAGCTCCAGGCATCAGGGAGAAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCATACACCATGGTATaGTTGAAGACGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSYTMV*LKTGLV
Trigger: CACCAACCCCGTCTTCAACCATACCATGGTGTATGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTGCTCAGCTGCCGCTaGGAGCTTCTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLLSCR*ELLPSH
Trigger: ATGAGAAGGAAGAAGCTCCCAGCGGCAGCTGAGCAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCACCAAACTGGAACTTaGGCCTGCGGGATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITHQTGT*ACGICV
Trigger: GACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGATTCTTCCTTTGCTTaGGCAGAGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACDSSFA*AETQLE
Trigger: CTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCTGGCTTTGGGGATTaGAGCTTTGGTATGAGACGC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSGFGD*SFGMRR
Trigger: GCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATCTGGCTTTGGGGATTaGAGCTTTGGTATGAGACGC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASGFGD*SFGMRR
Trigger: GCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCCGTGCTGCTGGAACTaGAGTTGCGCTTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITPCCWN*SCALGS
Trigger: GGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCACACTGAGGTCCTGTaGGTAGAATGTCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVHTEVL*VECLND
Trigger: GTCATTCAGACATTCTACCCACAGGACCTCAGTGTG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVWSLKL*SAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCTATCTCTGCCGCTaGGAGCTTCTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASYLCR*ELLPSH
Trigger: ATGAGAAGGAAGAAGCTCCCAGCGGCAGAGATAGCT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
3UTR CAA 72 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTaGAATGTCGGCATCACGCCACACTTCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLS*NVGITPHFFWA
Trigger: GGCCCAGAAGAAGTGTGGCGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTCTCTCTGATCTGCTaGAGGACTGTGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALSLIC*RTVVLF
Trigger: AAAGAGAACCACAGTCCTTCAGCAGATCAGAGAGAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCTGTGATCTCTCTCTaGTCTGCTGAAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITAVISL*SAEGLW
Trigger: CCACAGTCCTTCAGCAGATCAGAGAGAGATCACAGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATACTGTGACTTGGGCTaGATGACTGTTTCCCTCACT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAYCDLG*MTVSLT
Trigger: AGTGAGGGAAACAGTCATTCAGCCCAAGTCACAGTA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTGATTATCAGGCAGTaGAGGCACTGTGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLIIRQ*RHCGNS
Trigger: GGAATTTCCACAGTGCCTTCACTGCCTGATAATCAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGGTTTCTCTAACTGCTaGCGTGGCATATCTGGGATA +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAGFSNC*RGISGI
Trigger: TATCCCAGATATGCCACGTCAGCAGTTAGAGAAACC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGTGGTCTGCTGTCTGTaGTGGCTCAGGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITVVCCL*WLRLTT
Trigger: TGTGGTGAGCCTGAGCCATCACAGACAGCAGACCAC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGGCTGCAAGAAGATGTaGGCTGTGATGCCTTTAACT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACGCKKM*AVMPLT
Trigger: AGTTAAAGGCATCACAGCTCACATCTTCTTGCAGCC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAAACTGCCCAGGGACATaGCTTGTGACTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLENCPGT*LVTSWA
Trigger: AGCCCAGGAAGTCACAAGTCATGTCCCTGGGCAGTT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTTCCCCCATGAACCCTaGTTGCTCTACTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITFPHEP*LLYLRR
Trigger: CCTTCGCAAGTAGAGCAAGCAGGGTTCATGGGGGAA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVAVCSV*CPNPTF
Trigger: AAACGTGGGATTGGGACAGCAAACAGAACAAACAGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTTCCTTCTCATGGATaGTCTGATGATGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALPSHG*SDDVST
Trigger: GGTGCTGACATCATCAGAGCATCCATGAGAAGGAAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTGTGTCCTTATTCTaGTCAGCTGCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAVSLF*SAAAGS
Trigger: GCTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLLCPH*CVLILL
Trigger: GAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCACCCAGCTCTCCTTTaGCCTCATTGCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITHPALL*PHCCVL
Trigger: AAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESLSPC*WNWSCA
Trigger: AGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSLSPC*WNWSCA
Trigger: AGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITGSLSP*CWNWSC
Trigger: GCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCAGAAGGGGCTTACCTTaGCGATGGTCTCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACRRGLP*RWSLKL
Trigger: CAGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGACCTTCCTTGTGGGTaGCTTGTTGGGACAAATTCT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACDLPCG*LVGTNS
Trigger: AGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTTTAGCAGAAAGCTaGTGGCTGCAAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAALAES*WLQEDV
Trigger: CACATCTTCTTGCAGCCAGCAGCTTTCTGCTAAAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACAATGTTTGTCCTTCTaGATGAGATCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAQCLSF*MRSAPA
Trigger: GGCAGGTGCAGATCTCATCCAGAAGGACAAACATTG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTCTTTCAGGGAGCTTaGCGTCCACTTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLFQGA*RPLLQL
Trigger: AAGCTGGAGAAGTGGACGCCAAGCTCCCTGAAAGAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGCTAAATCCTTACACTaGGCCACAAACACATGCAGC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACAKSLH*ATNTCS
Trigger: GCTGCATGTGTTTGTGGCCCAGTGTAAGGATTTAGC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTGCCCCTCAACAGTaGGAGGTCAAGGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAAPQQ*EVKAFL
Trigger: AAGGAATGCCTTGACCTCCCACTGTTGAGGGGCAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCTGCCCCTCAACAGTaGGAGGTCAAGGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHAAPQQ*EVKAFL
Trigger: AAGGAATGCCTTGACCTCCCACTGTTGAGGGGCAGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCACAAAAGAATTTAGGTaGCTGCCCCTCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACTKEFR*LPLNSG
Trigger: CCCACTGTTGAGGGGCAGCCACCTAAATTCTTTTGT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAACAAAAGAATTTAGGTaGCTGCCCCTCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPATKEFR*LPLNSG
Trigger: CCCACTGTTGAGGGGCAGCCACCTAAATTCTTTTGT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCATACACCATGGTATaGTTGAAGACGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSYTMV*LKTGLV
Trigger: CACCAACCCCGTCTTCAACCATACCATGGTGTATGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCATGATGTCAGCACCGTaGATTTTGTCCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVMMSAP*ILSLCL
Trigger: AAGACACAGGGACAAAATCCACGGTGCTGACATCAT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACCAAACTGGAACTTaGGCCTGCGGGATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHHQTGT*ACGICV
Trigger: GACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAATCACACTGGAAGCTaGATCCACCAAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVNHTGS*IHQTGT
Trigger: AGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGTCCTCGTACTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVVLVLS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAGTACGAGGAC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGGGCAGAGACACAGCTaGAGTCCTCGTACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIGQRHS*SPRTFL
Trigger: CAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGGGCAGAGACACAGCTaGAGTCCTCGTACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHGQRHS*SPRTFL
Trigger: CAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALGAVE*ILPLLG
Trigger: CCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSPSVV*EKTGYH
Trigger: ATGATAACCAGTCTTTTCCCAGACAACGGAGGGACT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCCGTGCTGCTGGAACTaGAGTTGCGCTTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIPCCWN*SCALGS
Trigger: GGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCAGAGATTCTCTCGTaGATGGTTAGGCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSEILS*MVRPGD
Trigger: ATCACCTGGCCTAACCATCCACGAGAGAATCTCTGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTTGTGGGAGAGCTCTaGGTGATTCTGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAFVGEL*VILKLL
Trigger: GAGGAGTTTCAGAATCACCCAGAGCTCTCCCACAAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTTGTGGGAGAGCTCTaGGTGATTCTGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACFVGEL*VILKLL
Trigger: GAGGAGTTTCAGAATCACCCAGAGCTCTCCCACAAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACACACTGAGGTCCTGTaGGTAGAATGTCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAHTEVL*VECLND
Trigger: GTCATTCAGACATTCTACCCACAGGACCTCAGTGTG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACWSLKL*SAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGGAGGGAAGTCTTCTTaGTTTTGCTTTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVGGKSS*FCFSSL
Trigger: CAGAGAGGAAAAGCAAAACCAAGAAGACTTCCCTCC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCACTGGCTTCTTTTTaGTCCTCAGGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSLASF*SSGFFQ
Trigger: TTGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTAGCAGAAAGCTGCTaGCTGCAAGAAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLAESC*LQEDVS
Trigger: GCTCACATCTTCTTGCAGCCAGCAGCTTTCTGCTAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTAGCAGAAAGCTGCTaGCTGCAAGAAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALAESC*LQEDVS
Trigger: GCTCACATCTTCTTGCAGCCAGCAGCTTTCTGCTAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCTGTGATCTCTCTCTaGTCTGCTGAAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHAVISL*SAEGLW
Trigger: CCACAGTCCTTCAGCAGATCAGAGAGAGATCACAGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAGTGTCTCTTCTCCCTaGTGCCTGGAGCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSVSSP*CLELAR
Trigger: CCTTGCCAGCTCCAGGCATCAGGGAGAAGAGACACT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGGGGTATTTCCCCCATaGACCCTGCTTGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIGVFPP*TLLALL
Trigger: AAGTAGAGCAAGCAGGGTTCATGGGGGAAATACCCC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGACACCATGGTATGGTTaGAGACGGGGTTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITTPWYG*RRGWWF
Trigger: AAACCACCAACCCCGTCTTCAACCATACCATGGTGT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAATGGTCCCAGACTGTaGGTTCTACACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITNGPRL*VLHRLP
Trigger: TGGAAGCCTGTGTAGAACTCACAGTCTGGGACCATT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTTCAGGCAGATGTCTaGCTCTCTCCTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIFQADV*LSPLQP
Trigger: GGGCTGAAGAGGAGAGAGTCAGACATCTGCCTGAAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTTTCAGGCAGATGTCTaGCTCTCTCCTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHFQADV*LSPLQP
Trigger: GGGCTGAAGAGGAGAGAGTCAGACATCTGCCTGAAA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGGTAGAATGTCTGAATaGCAAGGGATCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVGRMSE*QGISSL
Trigger: AAGAGATGAGATCCCTTGTCATTCAGACATTCTACC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTGTGCTCTTCTTCTaGACCTTGCCGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAVLFF*TLPMVS
Trigger: AGAGACCATCGGCAAGGTTCAGAAGAAGAGCACAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCTGTGCTCTTCTTCTaGACCTTGCCGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHAVLFF*TLPMVS
Trigger: AGAGACCATCGGCAAGGTTCAGAAGAAGAGCACAGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGACATGTGAGGATGTCTaGGCAGTGAGAGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITTCEDV*AVRALR
Trigger: TCTCAAGGCTCTCACTGCTCAGACATCCTCACATGT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTTCTGGATGAGATCTaGACCTGCCAAAATTCCAAC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALLDEI*TCQNSN
Trigger: GTTGGAATTTTGGCAGGTGCAGATCTCATCCAGAAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGGTGTACCTGCTGTCTaGTCTCTTTCAGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHGVPAV*SLSGSL
Trigger: CAAGCTCCCTGAAAGAGAGCAGACAGCAGGTACACC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTCATCTTGAAGAAATaGTGGCACGGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALILKK*WHGLAH
Trigger: ATGAGCAAGTCCGTGCCAGCATTTCTTCAAGATGAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTCATCTTGAAGAAATaGTGGCACGGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLILKK*WHGLAH
Trigger: ATGAGCAAGTCCGTGCCAGCATTTCTTCAAGATGAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSSCPF*LCLVAD
Trigger: ATCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCGAGTGTCTTCTTCTTaGCCATTTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACRVSSS*PFCLCL
Trigger: CAGACAAAGGCAAAATGGGCAAGAAGAAGACACTCG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACGAGTGTCTTCTTCTTaGCCATTTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPARVSSS*PFCLCL
Trigger: CAGACAAAGGCAAAATGGGCAAGAAGAAGACACTCG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTTAAATGTATCCCGATaGCAAACGGACAGGTTCAAC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVLNVSR*QTDRFN
Trigger: GTTGAACCTGTCCGTTTGGCATCGGGATACATTTAA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACAVCSV*CPNPTF
Trigger: AAACGTGGGATTGGGACAGCAAACAGAACAAACAGC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAAVCSV*CPNPTF
Trigger: AAACGTGGGATTGGGACAGCAAACAGAACAAACAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAGGGCAGCATCCCTCTaGAGAACCTTTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHRAASL*RTFKMA
Trigger: CGCCATCTTAAAGGTTCTGCAGAGGGATGCTGCCCT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAAGGGCAGCATCCCTCTaGAGAACCTTTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLERAASL*RTFKMA
Trigger: CGCCATCTTAAAGGTTCTGCAGAGGGATGCTGCCCT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTTATTCTGCTCAGCTaGCGCTGGGAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLILLS*RWELLP
Trigger: AGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCTTATTCTGCTCAGCTaGCGCTGGGAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASILILLS*RWELLP
Trigger: AGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATACTGGAACTTGGGCCTaGGGGATCTGTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHTGTWA*GICVIF
Trigger: GAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTACTGGAACTTGGGCCTaGGGGATCTGTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASITGTWA*GICVIF
Trigger: GAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCAATGGATTCTTCCTTTaGTTGGGCAGAGACACAGCT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACNGFFL*LGRDTA
Trigger: AGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAATGGATTCTTCCTTTaGTTGGGCAGAGACACAGCT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPANGFFL*LGRDTA
Trigger: AGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTTTCCAGTTTTTGACTaGTCGGGTTTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVFPVFD*SGLVCC
Trigger: GCAACAAACCAAACCCGAGCAGTCAAAAACTGGAAA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFGSLSP*CWNWSC
Trigger: GCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTCCTCTATGTCCCCTaGATCTTCAGTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLLYVP*IFSSIL
Trigger: CAAAATGGAACTGAAGATGCAGGGGACATAGAGGAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAATTCCAACACCCTGTaGAAAAGGAGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPANSNTL*KRSCDL
Trigger: GAGATCACAGCTCCTTTTCCACAGGGTGTTGGAATT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCAGTTGCTGCTGGTTTaGAAGGAAGAACAACTTTCT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVQLLLV*KEEQLS
Trigger: AGAAAGTTGTTCTTCCTTCCAAACCAGCAGCAACTG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTCTTTCAGGGAGCTTaGCGTCCACTTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLFQGA*RPLLQL
Trigger: AAGCTGGAGAAGTGGACGCCAAGCTCCCTGAAAGAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTTCTCCCTGATGCCTaGAGCTGGCAAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLLPDA*SWQGPS
Trigger: GGAAGGACCTTGCCAGCTCCAGGCATCAGGGAGAAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCATTTTAGAGGCTCCTaGGCCATCCAAAATATGATG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVHFRGS*AIQNMM
Trigger: CATCATATTTTGGATGGCCCAGGAGCCTCTAAAATG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCATCTTGAAGAAATGCTaGCACGGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACILKKC*HGLAHP
Trigger: AGGATGAGCAAGTCCGTGCCAGCATTTCTTCAAGAT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTGCCCCTCAACAGTaGGAGGTCAAGGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAAPQQ*EVKAFL
Trigger: AAGGAATGCCTTGACCTCCCACTGTTGAGGGGCAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGGCGACTTTTTCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACGDFFY*YLEGWY
Trigger: GTACCATCCTTCCAGATACCAGTAGAAAAAGTCGCC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGGCGACTTTTTCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAGDFFY*YLEGWY
Trigger: GTACCATCCTTCCAGATACCAGTAGAAAAAGTCGCC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVLQPKC*ESLPSS
Trigger: AGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCATGATGTCAGCACCGTaGATTTTGTCCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACMMSAP*ILSLCL
Trigger: AAGACACAGGGACAAAATCCACGGTGCTGACATCAT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCACCAAACTGGAACTTaGGCCTGCGGGATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITHQTGT*ACGICV
Trigger: GACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCACATATCAATCACACTaGAAGCTGGATCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVTYQSH*KLDPPN
Trigger: GTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGTCCTCGTACTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAVLVLS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAGTACGAGGAC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGATTCTTCCTTTGCTTaGGCAGAGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITDSSFA*AETQLE
Trigger: CTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASPSVV*EKTGYH
Trigger: ATGATAACCAGTCTTTTCCCAGACAACGGAGGGACT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLSPCC*NWSCAL
Trigger: TAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELSPCC*NWSCAL
Trigger: TAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLSPCC*NWSCAL
Trigger: TAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTCTAGTGAGCTTGTaGAAGAGTCGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAALVSL*KSRLLK
Trigger: CTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGCTCTAGTGAGCTTGTaGAAGAGTCGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACALVSL*KSRLLK
Trigger: CTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCCTAAGCTTTCAGGATaGTTAGTGTTCCATGGGACT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACPKLSG*LVFHGT
Trigger: AGTCCCATGGAACACTAACCATCCTGAAAGCTTAGG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
3UTR CAA 72 bp TCTTTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTaGTTCAACTCTCTCCTTGAATGTCGGCATCACGCC +
Preference number: 4 (lower is better)
Translates to: SLVWKQQFSFPS*FNSLLECRHHA
Trigger: GGCGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTTCCAAGCCAGCCCTaGATTCAGGGTACTGTGACT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIFPSQP*IQGTVT
Trigger: AGTCACAGTACCCTGAATTCAGGGCTGGCTTGGAAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATACTACTCTCAGTTACTaGTGGAGCCTCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHTTLSY*WSLSLL
Trigger: GAGAAGGCTGAGGCTCCATCAGTAACTGAGAGTAGT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATACTACTCTCAGTTACTaGTGGAGCCTCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHTTLSY*WSLSLL
Trigger: GAGAAGGCTGAGGCTCCATCAGTAACTGAGAGTAGT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGGGGTATTTCCCCCATaGACCCTGCTTGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITGVFPP*TLLALL
Trigger: AAGTAGAGCAAGCAGGGTTCATGGGGGAAATACCCC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCATTTTATGGTCTTCATaGAGTTGTGAGCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVILWSS*SCEHSG
Trigger: CCCTGAATGCTCACAACTTCATGAAGACCATAAAAT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTGATTATCAGGCAGTaGAGGCACTGTGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLIIRQ*RHCGNS
Trigger: GGAATTTCCACAGTGCCTTCACTGCCTGATAATCAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCATCGCTCTCATCTTaGAGAAATGCTGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSSLSS*RNAGTD
Trigger: GTCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCATCGCTCTCATCTTaGAGAAATGCTGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISSLSS*RNAGTD
Trigger: GTCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCTTCTTGTATCTCCTaGGCTGGTAGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESSCIS*AGSCSL
Trigger: CAGAGAGCAGCTACCAGCTCAGGAGATACAAGAAGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCTTCTTGTATCTCCTaGGCTGGTAGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSSCIS*AGSCSL
Trigger: CAGAGAGCAGCTACCAGCTCAGGAGATACAAGAAGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTACACCATGGTATGGTTaGAGACGGGGTTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASITPWYG*RRGWWF
Trigger: AAACCACCAACCCCGTCTTCAACCATACCATGGTGT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATACACCATGGTATGGTTaGAGACGGGGTTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHTPWYG*RRGWWF
Trigger: AAACCACCAACCCCGTCTTCAACCATACCATGGTGT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAAATGGTCCCAGACTGTaGGTTCTACACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLENGPRL*VLHRLP
Trigger: TGGAAGCCTGTGTAGAACTCACAGTCTGGGACCATT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTTTCAGGCAGATGTCTaGCTCTCTCCTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITFQADV*LSPLQP
Trigger: GGGCTGAAGAGGAGAGAGTCAGACATCTGCCTGAAA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCAGCTTGGGGCTGTTaGATGGATTCTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAAWGC*MDSSFA
Trigger: AGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAATAGTGTCCTCTGTATaGGAACTTCGGTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAIVSSV*ELRLNQ
Trigger: CTGGTTTAACCGAAGTTCTCATACAGAGGACACTAT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTAATCTGTGCTTTTaGGTCTGTTTGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAANLCF*VCLLFE
Trigger: CTCAAACAGCAAACAGACTCAAAAGCACAGATTAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGTTCATGAACTTCCTTaGCAGAAGTCTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITVHELP*QKSGLL
Trigger: CAGCAAGCCAGACTTCTGGCAAGGAAGTTCATGAAC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACATGCCTCTGGCCCTTaGTCTTCCTCTTGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEHASGP*SSSCLL
Trigger: TAAGAGACAAGAGGAAGAGCAAGGGCCAGAGGCATG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCATGCCTCTGGCCCTTaGTCTTCCTCTTGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHHASGP*SSSCLL
Trigger: TAAGAGACAAGAGGAAGAGCAAGGGCCAGAGGCATG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASSCPF*LCLVAD
Trigger: ATCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGACAGGTTCAACTTCTaGGTCTTTAAGAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVDRFNF*VFKNCL
Trigger: AAGGCAATTCTTAAAGACGCAGAAGTTGAACCTGTC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTAAATGTATCCCGATaGCAAACGGACAGGTTCAAC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLNVSR*QTDRFN
Trigger: GTTGAACCTGTCCGTTTGGCATCGGGATACATTTAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCTGTGTCCTTATTCTaGTCAGCTGCCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHAVSLF*SAAAGS
Trigger: GCTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLLCPH*CVLILL
Trigger: GAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCACCCAGCTCTCCTTTaGCCTCATTGCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITHPALL*PHCCVL
Trigger: AAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTTCCAGTTTTTGACTaGTCGGGTTTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAFPVFD*SGLVCC
Trigger: GCAACAAACCAAACCCGAGCAGTCAAAAACTGGAAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTGTGGATACAGTTTaGTTTGGTTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSVDTV*FGFSNC
Trigger: GCAGTTAGAGAAACCAAAGCAAACTGTATCCACAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASICWNWS*ALGSLL
Trigger: CAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVQVIGF*FSDQGC
Trigger: ACAACCTTGATCCGAAAAGCAAAATCCTATCACCTG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCAGAGAATCTCACGTaGTTTAACGGCTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITAENLT*FNGSSE
Trigger: CTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCTTTAGCAGAAAGCTaGTGGCTGCAAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITALAES*WLQEDV
Trigger: CACATCTTCTTGCAGCCAGCAGCTTTCTGCTAAAGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATACATCAGTTGCTGCTaGTTTGGAAGGAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAYISCC*FGRKNN
Trigger: GTTGTTCTTCCTTCCAAACCAGCAGCAACTGATGTA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCCACTTTTGTTATCCTaGACATCTATCAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACPLLLS*TSINGP
Trigger: TGGCCCATTGATAGATGTCCAGGATAACAAAAGTGG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAGCTTCTTCAAAGCCTaGTTCCTGGGAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSFFKA*FLGSLC
Trigger: ACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAACAGCTCTTGTCTTCTaGCGACTTTTTCTACTGGTA +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPATALVF*RLFLLV
Trigger: TACCAGTAGAAAAAGTCGCCAGAAGACAAGAGCTGT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPALPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTGCTCAGCTGCCGCTaGGAGCTTCTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLLSCR*ELLPSH
Trigger: ATGAGAAGGAAGAAGCTCCCAGCGGCAGCTGAGCAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCACCAAACTGGAACTTaGGCCTGCGGGATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFHQTGT*ACGICV
Trigger: GACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAACATATCAATCACACTaGAAGCTGGATCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPATYQSH*KLDPPN
Trigger: GTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGATTCTTCCTTTGCTTaGGCAGAGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHDSSFA*AETQLE
Trigger: CTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGATTCTTCCTTTGCTTaGGCAGAGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIDSSFA*AETQLE
Trigger: CTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLGAVE*ILPLLG
Trigger: CCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCATTTTCAGGCTCTGTaGATACAGTTTGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVHFQAL*IQFALV
Trigger: AACCAAAGCAAACTGTATCCACAGAGCCTGAAAATG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSVFWL*GLELWY
Trigger: ATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASVFWL*GLELWY
Trigger: ATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTGTAGATCAGTTTTCTaGCTTTGGGGATTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACCRSVF*LWGLEL
Trigger: AAGCTCCAATCCCCAAAGCCAGAAAACTGATCTACA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLSPCC*NWSCAL
Trigger: TAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAGATTCTCTCGTGGATaGTTAGGCCAGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITRFSRG*LGQVIG
Trigger: TCCTATCACCTGGCCTAACCATCCACGAGAGAATCT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTCAGAGATTCTCTCGTaGATGGTTAGGCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSEILS*MVRPGD
Trigger: ATCACCTGGCCTAACCATCCACGAGAGAATCTCTGA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCACACTGAGGTCCTGTaGGTAGAATGTCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITHTEVL*VECLND
Trigger: GTCATTCAGACATTCTACCCACAGGACCTCAGTGTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITWSLKL*SAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCAGTGAAGGCACTGTaGAAACATCTTCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITAVKAL*KHLQHY
Trigger: GTAGTGCTGAAGATGTTTCCACAGTGCCTTCACTGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107211.8
ENSMUST00000190365.8
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGGCTTACCTTGCCGATaGTCTCTAAAACTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITGLPCR*SLKLWS
Trigger: AGACCACAGTTTTAGAGACCATCGGCAAGGTAAGCC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCTTGGGGTCCTCACTaGCTTCTTTTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSWGPH*LLFGPQ
Trigger: CTGAGGACCAAAAAGAAGCCAGTGAGGACCCCAAGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCTTGGGGTCCTCACTaGCTTCTTTTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSWGPH*LLFGPQ
Trigger: CTGAGGACCAAAAAGAAGCCAGTGAGGACCCCAAGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCAGCACTTGGTTCTTaGGGTCCTCACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSALGS*GPHWLL
Trigger: AAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTTAGGGACAGAACTTTaGAGCTGCCATTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVLGTEL*SCHLIY
Trigger: ATAAATCAAATGGCAGCTTCAAAGTTCTGTCCCTAA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTCTCTCTGATCTGCTaGAGGACTGTGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELSLIC*RTVVLF
Trigger: AAAGAGAACCACAGTCCTTCAGCAGATCAGAGAGAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGTGGAAAAGGAGCTGTaGTCTCTCTCTGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITVEKEL*SLSDLL
Trigger: CAGCAGATCAGAGAGAGATCACAGCTCCTTTTCCAC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATACTGTGACTTGGGCTaGATGACTGTTTCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEYCDLG*MTVSLT
Trigger: AGTGAGGGAAACAGTCATTCAGCCCAAGTCACAGTA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACTACTCTCAGTTACTaGTGGAGCCTCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITTTLSY*WSLSLL
Trigger: GAGAAGGCTGAGGCTCCATCAGTAACTGAGAGTAGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGGGGTATTTCCCCCATaGACCCTGCTTGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFGVFPP*TLLALL
Trigger: AAGTAGAGCAAGCAGGGTTCATGGGGGAAATACCCC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTCCAAACCACTACATaGAACCTTCATTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAFQTTT*NLHFRG
Trigger: GCCTCTAAAATGAAGGTTTCATGTAGTGGTTTGGAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGCTGTGCTCTTCTTCTaGACTGGAGGTATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHAVLFF*TGGISP
Trigger: TGGAGAAATACCTCCAGTTCAGAAGAAGAGCACAGC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTGTGCTCTTCTTCTaGACTGGAGGTATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAVLFF*TGGISP
Trigger: TGGAGAAATACCTCCAGTTCAGAAGAAGAGCACAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTGATTATCAGGCAGTaGAGGCACTGTGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLIIRQ*RHCGNS
Trigger: GGAATTTCCACAGTGCCTTCACTGCCTGATAATCAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITTCSSF*VCQGGK
Trigger: TTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCTTCTTGTATCTCCTaGGCTGGTAGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITSSCIS*AGSCSL
Trigger: CAGAGAGCAGCTACCAGCTCAGGAGATACAAGAAGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAATGGTCCCAGACTGTaGGTTCTACACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITNGPRL*VLHRLP
Trigger: TGGAAGCCTGTGTAGAACTCACAGTCTGGGACCATT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCCCTCTTTTGAAATCTaGAATAAACCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVPSFEI*NKPAFP
Trigger: TGGAAAAGCTGGTTTATTTCAGATTTCAAAAGAGGG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGGTTTCTCTAACTGCTaGCGTGGCATATCTGGGATA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEGFSNC*RGISGI
Trigger: TATCCCAGATATGCCACGTCAGCAGTTAGAGAAACC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGGTTTCTCTAACTGCTaGCGTGGCATATCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHGFSNC*RGISGI
Trigger: TATCCCAGATATGCCACGTCAGCAGTTAGAGAAACC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTGATTATCAGGCAGTaGAGGCACTGTGGAAACATC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELIIRQ*RHCGNI
Trigger: GATGTTTCCACAGTGCCTTCACTGCCTGATAATCAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107211.8
ENSMUST00000190365.8
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGAGATGTTGGAGGGATaGCATAGTGTCCTCTGTATG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIEMLEG*HSVLCM
Trigger: CATACAGAGGACACTATGTCATCCCTCCAACATCTC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAATTTACATCAGTTGCTaGTGGTTTGGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAIYISC*WFGRKN
Trigger: GTTCTTCCTTCCAAACCAGCAGCAACTGATGTAAAT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTCCCCCATGAACCCTaGTTGCTCTACTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFFPHEP*LLYLRR
Trigger: CCTTCGCAAGTAGAGCAAGCAGGGTTCATGGGGGAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCAGAAGAACAATGGAGTaGTTATTTCTGGACACACTC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACRRTME*LFLDTL
Trigger: GAGTGTGTCCAGAAATAAGCACTCCATTGTTCTTCT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTTTCACTTCTAGGTTaGCAAAGTCTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACLSLLG*QSLHCK
Trigger: TTTACAGTGGAGACTTTGGCAACCTAGAAGTGAAAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGACAGGTTCAACTTCTaGGTCTTTAAGAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACDRFNF*VFKNCL
Trigger: AAGGCAATTCTTAAAGACGCAGAAGTTGAACCTGTC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGACAGGTTCAACTTCTaGGTCTTTAAGAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPADRFNF*VFKNCL
Trigger: AAGGCAATTCTTAAAGACGCAGAAGTTGAACCTGTC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITAVCSV*CPNPTF
Trigger: AAACGTGGGATTGGGACAGCAAACAGAACAAACAGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTTTAAGATGGCGTCTTaGTCCTCCTCTGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITFKMAS*SSSVRK
Trigger: TTTCCTGACAGAGGAGGAGCAAGACGCCATCTTAAA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAGGGCAGCATCCCTCTaGAGAACCTTTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFRAASL*RTFKMA
Trigger: CGCCATCTTAAAGGTTCTGCAGAGGGATGCTGCCCT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTTCCTTCTCATGGATaGTCTGATGATGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELPSHG*SDDVST
Trigger: GGTGCTGACATCATCAGAGCATCCATGAGAAGGAAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTTCCTTCTCATGGATaGTCTGATGATGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLPSHG*SDDVST
Trigger: GGTGCTGACATCATCAGAGCATCCATGAGAAGGAAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTTATTCTGCTCAGCTaGCGCTGGGAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLILLS*RWELLP
Trigger: AGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASILLCPH*CVLILL
Trigger: GAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTACTGGAACTTGGGCCTaGGGGATCTGTGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFTGTWA*GICVIF
Trigger: GAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAATGGATTCTTCCTTTaGTTGGGCAGAGACACAGCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITNGFFL*LGRDTA
Trigger: AGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCTGTGGATACAGTTTaGTTTGGTTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSVDTV*FGFSNC
Trigger: GCAGTTAGAGAAACCAAAGCAAACTGTATCCACAGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITCWNWS*ALGSLL
Trigger: CAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSLSPC*WNWSCA
Trigger: AGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAGAAGGGGCTTACCTTaGCGATGGTCTCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIRRGLP*RWSLKL
Trigger: CAGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGACCTTCCTTGTGGGTaGCTTGTTGGGACAAATTCT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHDLPCG*LVGTNS
Trigger: AGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCAATGTTTGTCCTTCTaGATGAGATCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIQCLSF*MRSAPA
Trigger: GGCAGGTGCAGATCTCATCCAGAAGGACAAACATTG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACAATGTTTGTCCTTCTaGATGAGATCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEQCLSF*MRSAPA
Trigger: GGCAGGTGCAGATCTCATCCAGAAGGACAAACATTG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCGTGCCGTTCTCAGATaGAAGCTGAGCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFRAVLR*KLSIPR
Trigger: TCTTGGGATGCTCAGCTTCCATCTGAGAACGGCACG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTAAATCCTTACACTaGGCCACAAACACATGCAGC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAKSLH*ATNTCS
Trigger: GCTGCATGTGTTTGTGGCCCAGTGTAAGGATTTAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTAAATCCTTACACTaGGCCACAAACACATGCAGC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAKSLH*ATNTCS
Trigger: GCTGCATGTGTTTGTGGCCCAGTGTAAGGATTTAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGCTAAATCCTTACACTaGGCCACAAACACATGCAGC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHAKSLH*ATNTCS
Trigger: GCTGCATGTGTTTGTGGCCCAGTGTAAGGATTTAGC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATACAAAAGAATTTAGGTaGCTGCCCCTCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHTKEFR*LPLNSG
Trigger: CCCACTGTTGAGGGGCAGCCACCTAAATTCTTTTGT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGGCGACTTTTTCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITGDFFY*YLEGWY
Trigger: GTACCATCCTTCCAGATACCAGTAGAAAAAGTCGCC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCATACACCATGGTATaGTTGAAGACGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESYTMV*LKTGLV
Trigger: CACCAACCCCGTCTTCAACCATACCATGGTGTATGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCATACACCATGGTATaGTTGAAGACGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSYTMV*LKTGLV
Trigger: CACCAACCCCGTCTTCAACCATACCATGGTGTATGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGATGATGTCAGCACCGTaGATTTTGTCCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITMMSAP*ILSLCL
Trigger: AAGACACAGGGACAAAATCCACGGTGCTGACATCAT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGGCAGAGACACAGCTaGAGTCCTCGTACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGQRHS*SPRTFL
Trigger: CAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLGAVE*ILPLLG
Trigger: CCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCATTTTCAGGCTCTGTaGATACAGTTTGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACHFQAL*IQFALV
Trigger: AACCAAAGCAAACTGTATCCACAGAGCCTGAAAATG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCTGGCTTTGGGGATTaGAGCTTTGGTATGAGACGC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITSGFGD*SFGMRR
Trigger: GCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSPSVV*EKTGYH
Trigger: ATGATAACCAGTCTTTTCCCAGACAACGGAGGGACT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCCGTGCTGCTGGAACTaGAGTTGCGCTTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHPCCWN*SCALGS
Trigger: GGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLSPCC*NWSCAL
Trigger: TAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATAGATTCTCTCGTGGATaGTTAGGCCAGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHRFSRG*LGQVIG
Trigger: TCCTATCACCTGGCCTAACCATCCACGAGAGAATCT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAGAGATTCTCTCGTaGATGGTTAGGCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISEILS*MVRPGD
Trigger: ATCACCTGGCCTAACCATCCACGAGAGAATCTCTGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCTCTAGTGAGCTTGTaGAAGAGTCGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITALVSL*KSRLLK
Trigger: CTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAGGGATCTCATCTCTTaGAGCAGACCCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIRDLIS*SRPRRH
Trigger: ATGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAGGGATCTCATCTCTTaGAGCAGACCCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHRDLIS*SRPRRH
Trigger: ATGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACACACTGAGGTCCTGTaGGTAGAATGTCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEHTEVL*VECLND
Trigger: GTCATTCAGACATTCTACCCACAGGACCTCAGTGTG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCACACTGAGGTCCTGTaGGTAGAATGTCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIHTEVL*VECLND
Trigger: GTCATTCAGACATTCTACCCACAGGACCTCAGTGTG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIWSLKL*SAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEWSLKL*SAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCCTAAGCTTTCAGGATaGTTAGTGTTCCATGGGACT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITPKLSG*LVFHGT
Trigger: AGTCCCATGGAACACTAACCATCCTGAAAGCTTAGG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTTATCACACTGGCTaGTTTGAGATTCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAYHTG*FEIPNH
Trigger: GTGGTTTGGAATCTCAAATCAGCCAGTGTGATAAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTTATCACACTGGCTaGTTTGAGATTCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAYHTG*FEIPNH
Trigger: GTGGTTTGGAATCTCAAATCAGCCAGTGTGATAAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTGTGCTCTTCTTCTaGACTGGAGGTATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAVLFF*TGGISP
Trigger: TGGAGAAATACCTCCAGTTCAGAAGAAGAGCACAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLETCSSF*VCQGGK
Trigger: TTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHTCSSF*VCQGGK
Trigger: TTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHTCSSF*VCQGGK
Trigger: TTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCTTCTTGTATCTCCTaGGCTGGTAGCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSSCIS*AGSCSL
Trigger: CAGAGAGCAGCTACCAGCTCAGGAGATACAAGAAGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAATGGTCCCAGACTGTaGGTTCTACACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFNGPRL*VLHRLP
Trigger: TGGAAGCCTGTGTAGAACTCACAGTCTGGGACCATT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGCAGCTTGGGGCTGTTaGATGGATTCTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFAAWGC*MDSSFA
Trigger: AGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGCTTTTGGACAATTCTaGTGGAAGCTTTGTAAAATG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAAFGQF*WKLCKM
Trigger: CATTTTACAAAGCTTCCATCAGAATTGTCCAAAAGC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCTGTGCTCTTCTTCTaGACCTTGCCGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHAVLFF*TLPMVS
Trigger: AGAGACCATCGGCAAGGTTCAGAAGAAGAGCACAGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTACATGTGAGGATGTCTaGGCAGTGAGAGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFTCEDV*AVRALR
Trigger: TCTCAAGGCTCTCACTGCTCAGACATCCTCACATGT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTTCTGGATGAGATCTaGACCTGCCAAAATTCCAAC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLLDEI*TCQNSN
Trigger: GTTGGAATTTTGGCAGGTGCAGATCTCATCCAGAAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCATGCCTCTGGCCCTTaGTCTTCCTCTTGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFHASGP*SSSCLL
Trigger: TAAGAGACAAGAGGAAGAGCAAGGGCCAGAGGCATG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCTCATCTTGAAGAAATaGTGGCACGGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASILILKK*WHGLAH
Trigger: ATGAGCAAGTCCGTGCCAGCATTTCTTCAAGATGAG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSSCPF*LCLVAD
Trigger: ATCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCGAGTGTCTTCTTCTTaGCCATTTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIRVSSS*PFCLCL
Trigger: CAGACAAAGGCAAAATGGGCAAGAAGAAGACACTCG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTTAAATGTATCCCGATaGCAAACGGACAGGTTCAAC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLNVSR*QTDRFN
Trigger: GTTGAACCTGTCCGTTTGGCATCGGGATACATTTAA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAVCSV*CPNPTF
Trigger: AAACGTGGGATTGGGACAGCAAACAGAACAAACAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTTAAGATGGCGTCTTaGTCCTCCTCTGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIFKMAS*SSSVRK
Trigger: TTTCCTGACAGAGGAGGAGCAAGACGCCATCTTAAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTTCCTTCTCATGGATaGTCTGATGATGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLPSHG*SDDVST
Trigger: GGTGCTGACATCATCAGAGCATCCATGAGAAGGAAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLLCPH*CVLILL
Trigger: GAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAATGGATTCTTCCTTTaGTTGGGCAGAGACACAGCT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHNGFFL*LGRDTA
Trigger: AGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFCWNWS*ALGSLL
Trigger: CAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTTCAGTTCCATTTTaGAACTGGTCAGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSSVPF*NWSDSK
Trigger: TTTAGAATCTGACCAGTTGCAAAATGGAACTGAAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTCCTCTATGTCCCCTaGATCTTCAGTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLLYVP*IFSSIL
Trigger: CAAAATGGAACTGAAGATGCAGGGGACATAGAGGAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTCCTCTATGTCCCCTaGATCTTCAGTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELLYVP*IFSSIL
Trigger: CAAAATGGAACTGAAGATGCAGGGGACATAGAGGAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTCCTCTATGTCCCCTaGATCTTCAGTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLLYVP*IFSSIL
Trigger: CAAAATGGAACTGAAGATGCAGGGGACATAGAGGAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCCTTGTTTTCATTCCTaGGACTTGGGATTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIPCFHS*DLGFCR
Trigger: CCTACAGAATCCCAAGTCGCAGGAATGAAAACAAGG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACCTTGTTTTCATTCCTaGGACTTGGGATTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEPCFHS*DLGFCR
Trigger: CCTACAGAATCCCAAGTCGCAGGAATGAAAACAAGG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGACTTGTTCTGTATTaGGTTCATCCATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPARLVLY*VHPFFL
Trigger: GAGAAAGAATGGATGAACCCAATACAGAACAAGTCT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTGCTTGTTTTCACTATaGATTCTTGAATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVCLFSL*ILESLA
Trigger: AGCAAGAGATTCAAGAATCCATAGTGAAAACAAGCA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAATTCCAACACCCTGTaGAAAAGGAGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHNSNTL*KRSCDL
Trigger: GAGATCACAGCTCCTTTTCCACAGGGTGTTGGAATT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAATTCCAACACCCTGTaGAAAAGGAGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASINSNTL*KRSCDL
Trigger: GAGATCACAGCTCCTTTTCCACAGGGTGTTGGAATT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCGTGCCGTTCTCAGATaGAAGCTGAGCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHRAVLR*KLSIPR
Trigger: TCTTGGGATGCTCAGCTTCCATCTGAGAACGGCACG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCAGTTGCTGCTGGTTTaGAAGGAAGAACAACTTTCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITQLLLV*KEEQLS
Trigger: AGAAAGTTGTTCTTCCTTCCAAACCAGCAGCAACTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATATGGAAGTCCTTATTTaGAACAACAGGGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHMEVLI*NNRVWS
Trigger: GCTCCAGACCCTGTTGTTCCAAATAAGGACTTCCAT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAATGGAAGTCCTTATTTaGAACAACAGGGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEMEVLI*NNRVWS
Trigger: GCTCCAGACCCTGTTGTTCCAAATAAGGACTTCCAT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCATTTTAGAGGCTCCTaGGCCATCCAAAATATGATG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITHFRGS*AIQNMM
Trigger: CATCATATTTTGGATGGCCCAGGAGCCTCTAAAATG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCCACTTTTGTTATCCTaGACATCTATCAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITPLLLS*TSINGP
Trigger: TGGCCCATTGATAGATGTCCAGGATAACAAAAGTGG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAGCTTCTTCAAAGCCTaGTTCCTGGGAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSFFKA*FLGSLC
Trigger: ACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTTCCAGAAGAACAATaGAGTGCTTATTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACFPEEQ*SAYFWT
Trigger: TGTCCAGAAATAAGCACTCCATTGTTCTTCTGGAAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAACATTCATTTGTATCTaGTTCTTGGTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PRSFLIALPKTFLLRSPATFICI*FLVGFL
Trigger: CAAAAAGCCGACCAAGAACCAGATACAAATGAATGT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATATCTTGAAGAAATGCTaGCACGGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHILKKC*HGLAHP
Trigger: AGGATGAGCAAGTCCGTGCCAGCATTTCTTCAAGAT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAATCTTGAAGAAATGCTaGCACGGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEILKKC*HGLAHP
Trigger: AGGATGAGCAAGTCCGTGCCAGCATTTCTTCAAGAT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGATTGGTTAATGAGCTaGGGCTCTTCTTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEDWLMS*GSSCIS
Trigger: GGAGATACAAGAAGAGCCCCAGCTCATTAACCAATC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGATTGGTTAATGAGCTaGGGCTCTTCTTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIDWLMS*GSSCIS
Trigger: GGAGATACAAGAAGAGCCCCAGCTCATTAACCAATC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGATTGGTTAATGAGCTaGGGCTCTTCTTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHDWLMS*GSSCIS
Trigger: GGAGATACAAGAAGAGCCCCAGCTCATTAACCAATC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACAAAAGAATTTAGGTaGCTGCCCCTCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITTKEFR*LPLNSG
Trigger: CCCACTGTTGAGGGGCAGCCACCTAAATTCTTTTGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGGCGACTTTTTCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIGDFFY*YLEGWY
Trigger: GTACCATCCTTCCAGATACCAGTAGAAAAAGTCGCC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLQPKC*ESLPSS
Trigger: AGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTATGATGTCAGCACCGTaGATTTTGTCCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIMMSAP*ILSLCL
Trigger: AAGACACAGGGACAAAATCCACGGTGCTGACATCAT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAATCACACTGGAAGCTaGATCCACCAAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHNHTGS*IHQTGT
Trigger: AGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAATCACACTGGAAGCTaGATCCACCAAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASINHTGS*IHQTGT
Trigger: AGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAAATCACACTGGAAGCTaGATCCACCAAACTGGAACT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLENHTGS*IHQTGT
Trigger: AGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGTCCTCGTACTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIVLVLS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAGTACGAGGAC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGTCCTCGTACTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEVLVLS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAGTACGAGGAC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCTGGCTTTGGGGATTaGAGCTTTGGTATGAGACGC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSGFGD*SFGMRR
Trigger: GCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTGTAGATCAGTTTTCTaGCTTTGGGGATTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITCRSVF*LWGLEL
Trigger: AAGCTCCAATCCCCAAAGCCAGAAAACTGATCTACA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSPSVV*EKTGYH
Trigger: ATGATAACCAGTCTTTTCCCAGACAACGGAGGGACT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAGATTCTCTCGTGGATaGTTAGGCCAGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITRFSRG*LGQVIG
Trigger: TCCTATCACCTGGCCTAACCATCCACGAGAGAATCT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTCTAGTGAGCTTGTaGAAGAGTCGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEALVSL*KSRLLK
Trigger: CTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTCTAGTGAGCTTGTaGAAGAGTCGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIALVSL*KSRLLK
Trigger: CTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTTTGTGGGAGAGCTCTaGGTGATTCTGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITFVGEL*VILKLL
Trigger: GAGGAGTTTCAGAATCACCCAGAGCTCTCCCACAAA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAGGGATCTCATCTCTTaGAGCAGACCCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITRDLIS*SRPRRH
Trigger: ATGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCAGTGAAGGCACTGTaGAAACATCTTCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAVKAL*KHLQHY
Trigger: GTAGTGCTGAAGATGTTTCCACAGTGCCTTCACTGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107211.8
ENSMUST00000190365.8
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGTACTCTCCAAACCTTaGCTACCACCCTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIVLSKP*LPPLFS
Trigger: TGAAAACAAGGGTGGTAGCCAAGGTTTGGAGAGTAC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCACTGGCTTCTTTTTaGTCCTCAGGCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISLASF*SSGFFQ
Trigger: TTGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTCTCTCTCAGCACTTaGTTCTTGGGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFFSLST*FLGSSL
Trigger: CAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTTATCACACTGGCTaGTTTGAGATTCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAYHTG*FEIPNH
Trigger: GTGGTTTGGAATCTCAAATCAGCCAGTGTGATAAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCATCGCTCTCATCTTaGAGAAATGCTGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSSLSS*RNAGTD
Trigger: GTCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATACACCATGGTATGGTTaGAGACGGGGTTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHTPWYG*RRGWWF
Trigger: AAACCACCAACCCCGTCTTCAACCATACCATGGTGT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGGTAGAATGTCTGAATaGCAAGGGATCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHGRMSE*QGISSL
Trigger: AAGAGATGAGATCCCTTGTCATTCAGACATTCTACC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTGATTATCAGGCAGTaGAGGCACTGTGGAAACATC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLIIRQ*RHCGNI
Trigger: GATGTTTCCACAGTGCCTTCACTGCCTGATAATCAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107211.8
ENSMUST00000190365.8
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAATAGTGTCCTCTGTATaGGAACTTCGGTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEIVSSV*ELRLNQ
Trigger: CTGGTTTAACCGAAGTTCTCATACAGAGGACACTAT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCTAATCTGTGCTTTTaGGTCTGTTTGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHANLCF*VCLLFE
Trigger: CTCAAACAGCAAACAGACTCAAAAGCACAGATTAGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGGCTGCAAGAAGATGTaGGCTGTGATGCCTTTAACT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFGCKKM*AVMPLT
Trigger: AGTTAAAGGCATCACAGCTCACATCTTCTTGCAGCC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGTTCATGAACTTCCTTaGCAGAAGTCTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFVHELP*QKSGLL
Trigger: CAGCAAGCCAGACTTCTGGCAAGGAAGTTCATGAAC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAACACCTACTTTGAGTaGTTGCTGTTCATGAACTTC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITNTYFE*LLFMNF
Trigger: GAAGTTCATGAACAGCAAGCACTCAAAGTAGGTGTT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGATTTACATCAGTTGCTaGTGGTTTGGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITIYISC*WFGRKN
Trigger: GTTCTTCCTTCCAAACCAGCAGCAACTGATGTAAAT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESSCPF*LCLVAD
Trigger: ATCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISSCPF*LCLVAD
Trigger: ATCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCGAGTGTCTTCTTCTTaGCCATTTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITRVSSS*PFCLCL
Trigger: CAGACAAAGGCAAAATGGGCAAGAAGAAGACACTCG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTTAAATGTATCCCGATaGCAAACGGACAGGTTCAAC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLNVSR*QTDRFN
Trigger: GTTGAACCTGTCCGTTTGGCATCGGGATACATTTAA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTAAATGTATCCCGATaGCAAACGGACAGGTTCAAC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELNVSR*QTDRFN
Trigger: GTTGAACCTGTCCGTTTGGCATCGGGATACATTTAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAATGGATTCTTCCTTTaGTTGGGCAGAGACACAGCT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITNGFFL*LGRDTA
Trigger: AGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTTCCAGTTTTTGACTaGTCGGGTTTGGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIFPVFD*SGLVCC
Trigger: GCAACAAACCAAACCCGAGCAGTCAAAAACTGGAAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTCTGTGGATACAGTTTaGTTTGGTTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSVDTV*FGFSNC
Trigger: GCAGTTAGAGAAACCAAAGCAAACTGTATCCACAGA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHCWNWS*ALGSLL
Trigger: CAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGCAGAGAATCTCACGTaGTTTAACGGCTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFAENLT*FNGSSE
Trigger: CTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCTTCAGTTCCATTTTaGAACTGGTCAGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACSSVPF*NWSDSK
Trigger: TTTAGAATCTGACCAGTTGCAAAATGGAACTGAAGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTCCTCTATGTCCCCTaGATCTTCAGTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLLYVP*IFSSIL
Trigger: CAAAATGGAACTGAAGATGCAGGGGACATAGAGGAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATAACTCCTTGGATTTCTaGATGTTCAGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHNSLDF*MFSGTE
Trigger: TTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCTGCTGAAGGACTGTaGTTCTCTTTCATCCACTTT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSAEGL*FSFIHF
Trigger: AAAGTGGATGAAAGAGAACCACAGTCCTTCAGCAGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCTGCTGAAGGACTGTaGTTCTCTTTCATCCACTTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISAEGL*FSFIHF
Trigger: AAAGTGGATGAAAGAGAACCACAGTCCTTCAGCAGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCAGTTGCTGCTGGTTTaGAAGGAAGAACAACTTTCT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHQLLLV*KEEQLS
Trigger: AGAAAGTTGTTCTTCCTTCCAAACCAGCAGCAACTG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATACATCAGTTGCTGCTaGTTTGGAAGGAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEYISCC*FGRKNN
Trigger: GTTGTTCTTCCTTCCAAACCAGCAGCAACTGATGTA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAGCTTCTTCAAAGCCTaGTTCCTGGGAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSFFKA*FLGSLC
Trigger: ACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCTCTTCTTCTGAACTaGAGGTATTTCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHALLLN*RYFSSS
Trigger: AGAACTGGAGAAATACCTCCAGTTCAGAAGAAGAGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCAGTGAAGGCACTGTaGAAATTCCTGGTATACATT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAVKAL*KFLVYI
Trigger: AATGTATACCAGGAATTTCCACAGTGCCTTCACTGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCAGTGAAGGCACTGTaGAAATTCCTGGTATACATT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAVKAL*KFLVYI
Trigger: AATGTATACCAGGAATTTCCACAGTGCCTTCACTGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCAGTGAAGGCACTGTaGAAATTCCTGGTATACATT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHAVKAL*KFLVYI
Trigger: AATGTATACCAGGAATTTCCACAGTGCCTTCACTGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGCTAAATCCTTACACTaGGCCACAAACACATGCAGC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFAKSLH*ATNTCS
Trigger: GCTGCATGTGTTTGTGGCCCAGTGTAAGGATTTAGC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTTTTCTACTGGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: TFLLRSPASISITKRQACFSTGI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACCAGTAGAAAA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAACAGCTCTTGTCTTCTaGCGACTTTTTCTACTGGTA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLETALVF*RLFLLV
Trigger: TACCAGTAGAAAAAGTCGCCAGAAGACAAGAGCTGT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATACAGCTCTTGTCTTCTaGCGACTTTTTCTACTGGTA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHTALVF*RLFLLV
Trigger: TACCAGTAGAAAAAGTCGCCAGAAGACAAGAGCTGT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLQPKC*ESLPSS
Trigger: AGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLQPKC*ESLPSS
Trigger: AGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAACATATCAATCACACTaGAAGCTGGATCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLETYQSH*KLDPPN
Trigger: GTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGTCCTCGTACTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITVLVLS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAGTACGAGGAC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGATTCTTCCTTTGCTTaGGCAGAGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHDSSFA*AETQLE
Trigger: CTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLGAVE*ILPLLG
Trigger: CCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISVFWL*GLELWY
Trigger: ATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTAGATCAGTTTTCTaGCTTTGGGGATTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLECRSVF*LWGLEL
Trigger: AAGCTCCAATCCCCAAAGCCAGAAAACTGATCTACA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAGATTCTCTCGTGGATaGTTAGGCCAGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFRFSRG*LGQVIG
Trigger: TCCTATCACCTGGCCTAACCATCCACGAGAGAATCT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFWSLKL*SAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTGTGGGTGCCTTGTTaGGACAAATTCTCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASILWVPC*DKFSEL
Trigger: TAACTCTGAGAATTTGTCCCAACAAGGCACCCACAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGGAGGGAAGTCTTCTTaGTTTTGCTTTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITGGKSS*FCFSSL
Trigger: CAGAGAGGAAAAGCAAAACCAAGAAGACTTCCCTCC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCAGCACTTGGTTCTTaGGGTCCTCACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSALGS*GPHWLL
Trigger: AAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTCATCAAAGACCACTaGTTTAGCTGTGACTTCACT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELIKDH*FSCDFT
Trigger: AGTGAAGTCACAGCTAAACCAGTGGTCTTTGATGAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
3UTR CAA 72 bp GATTGTGGTAGGAAACATGTGAAGCTAGCTTTTTCTTaGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: DCGRKHVKLAFS*VWKQQFSFPSL
Trigger: CAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCTACCACAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTTCCAAACCACTACATaGAACCTTCATTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHFQTTT*NLHFRG
Trigger: GCCTCTAAAATGAAGGTTTCATGTAGTGGTTTGGAA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTCCAAACCACTACATaGAACCTTCATTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFQTTT*NLHFRG
Trigger: GCCTCTAAAATGAAGGTTTCATGTAGTGGTTTGGAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFTCSSF*VCQGGK
Trigger: TTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCCCTCTTTTGAAATCTaGAATAAACCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITPSFEI*NKPAFP
Trigger: TGGAAAAGCTGGTTTATTTCAGATTTCAAAAGAGGG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGTTTCTCTAACTGCTaGCGTGGCATATCTGGGATA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGFSNC*RGISGI
Trigger: TATCCCAGATATGCCACGTCAGCAGTTAGAGAAACC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGAGATGTTGGAGGGATaGCATAGTGTCCTCTGTATG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHEMLEG*HSVLCM
Trigger: CATACAGAGGACACTATGTCATCCCTCCAACATCTC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTTCTCCATCTCTTCTaGAGCTATAACATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIFLHLF*SYNISL
Trigger: CAGGGAAATGTTATAGCTGCAGAAGAGATGGAGAAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTTTCTCCATCTCTTCTaGAGCTATAACATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHFLHLF*SYNISL
Trigger: CAGGGAAATGTTATAGCTGCAGAAGAGATGGAGAAA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTTCTCCATCTCTTCTaGAGCTATAACATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFLHLF*SYNISL
Trigger: CAGGGAAATGTTATAGCTGCAGAAGAGATGGAGAAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAACACCTACTTTGAGTaGTTGCTGTTCATGAACTTC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHNTYFE*LLFMNF
Trigger: GAAGTTCATGAACAGCAAGCACTCAAAGTAGGTGTT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAACACCTACTTTGAGTaGTTGCTGTTCATGAACTTC +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASINTYFE*LLFMNF
Trigger: GAAGTTCATGAACAGCAAGCACTCAAAGTAGGTGTT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATATTTACATCAGTTGCTaGTGGTTTGGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHIYISC*WFGRKN
Trigger: GTTCTTCCTTCCAAACCAGCAGCAACTGATGTAAAT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCATCTCCTCCTAATTaGTTATCACACTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSSPPN*LSHWLI
Trigger: AATCAGCCAGTGTGATAAGCAATTAGGAGGAGATGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCATCTCCTCCTAATTaGTTATCACACTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESSPPN*LSHWLI
Trigger: AATCAGCCAGTGTGATAAGCAATTAGGAGGAGATGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAGAAGAACAATGGAGTaGTTATTTCTGGACACACTC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHRRTME*LFLDTL
Trigger: GAGTGTGTCCAGAAATAAGCACTCCATTGTTCTTCT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTCATCTTGAAGAAATaGTGGCACGGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLILKK*WHGLAH
Trigger: ATGAGCAAGTCCGTGCCAGCATTTCTTCAAGATGAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTTTCACTTCTAGGTTaGCAAAGTCTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELSLLG*QSLHCK
Trigger: TTTACAGTGGAGACTTTGGCAACCTAGAAGTGAAAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCTTTCACTTCTAGGTTaGCAAAGTCTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASILSLLG*QSLHCK
Trigger: TTTACAGTGGAGACTTTGGCAACCTAGAAGTGAAAG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTTTCACTTCTAGGTTaGCAAAGTCTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLSLLG*QSLHCK
Trigger: TTTACAGTGGAGACTTTGGCAACCTAGAAGTGAAAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCGAGTGTCTTCTTCTTaGCCATTTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFRVSSS*PFCLCL
Trigger: CAGACAAAGGCAAAATGGGCAAGAAGAAGACACTCG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGACAGGTTCAACTTCTaGGTCTTTAAGAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHDRFNF*VFKNCL
Trigger: AAGGCAATTCTTAAAGACGCAGAAGTTGAACCTGTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGACAGGTTCAACTTCTaGGTCTTTAAGAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIDRFNF*VFKNCL
Trigger: AAGGCAATTCTTAAAGACGCAGAAGTTGAACCTGTC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTTAAGATGGCGTCTTaGTCCTCCTCTGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFFKMAS*SSSVRK
Trigger: TTTCCTGACAGAGGAGGAGCAAGACGCCATCTTAAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGTCCCTGTGTCTTTTTaGCTTAGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHVPVSF*LSFIKP
Trigger: TGGTTTTATGAAGCTAAGGCAAAAAGACACAGGGAC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGTCCCTGTGTCTTTTTaGCTTAGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEVPVSF*LSFIKP
Trigger: TGGTTTTATGAAGCTAAGGCAAAAAGACACAGGGAC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGTCCCTGTGTCTTTTTaGCTTAGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIVPVSF*LSFIKP
Trigger: TGGTTTTATGAAGCTAAGGCAAAAAGACACAGGGAC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGTCCCTGTGTCTTTTTaGCTTAGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHVPVSF*LSFIKP
Trigger: TGGTTTTATGAAGCTAAGGCAAAAAGACACAGGGAC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLLCPH*CVLILL
Trigger: GAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAATGGATTCTTCCTTTaGTTGGGCAGAGACACAGCT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFNGFFL*LGRDTA
Trigger: AGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCTGTGGATACAGTTTaGTTTGGTTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSVDTV*FGFSNC
Trigger: GCAGTTAGAGAAACCAAAGCAAACTGTATCCACAGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHQVIGF*FSDQGC
Trigger: ACAACCTTGATCCGAAAAGCAAAATCCTATCACCTG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEQVIGF*FSDQGC
Trigger: ACAACCTTGATCCGAAAAGCAAAATCCTATCACCTG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCTTTTGAGTCTGTTTaGTGTTTGAGATCTATTCCT +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITAFESV*CLRSIP
Trigger: AGGAATAGATCTCAAACAGCAAACAGACTCAAAAGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGTTAGACTTGAGAAGTaGATCACTATCTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHVRLEK*ITILAS
Trigger: ACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAAC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAGACTTGTTCTGTATTaGGTTCATCCATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITRLVLY*VHPFFL
Trigger: GAGAAAGAATGGATGAACCCAATACAGAACAAGTCT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAACTCCTTGGATTTCTaGATGTTCAGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITNSLDF*MFSGTE
Trigger: TTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGACCGTGCAAAAAGAATaGAAGTCCTTATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITTVQKE*KSLFGT
Trigger: TGTTCCAAATAAGGACTTCCATTCTTTTTGCACGGT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTCTTCTTCTGAACTaGAGGTATTTCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITALLLN*RYFSSS
Trigger: AGAACTGGAGAAATACCTCCAGTTCAGAAGAAGAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGACATTCATTTGTATCTaGTTCTTGGTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: NSSVFLACSTLSLNVGITTFICI*FLVGFL
Trigger: CAAAAAGCCGACCAAGAACCAGATACAAATGAATGT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATACAAAAGAATTTAGGTaGCTGCCCCTCAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHTKEFR*LPLNSG
Trigger: CCCACTGTTGAGGGGCAGCCACCTAAATTCTTTTGT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGGCGACTTTTTCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFGDFFY*YLEGWY
Trigger: GTACCATCCTTCCAGATACCAGTAGAAAAAGTCGCC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACAGCTCTTGTCTTCTaGCGACTTTTTCTACTGGTA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITTALVF*RLFLLV
Trigger: TACCAGTAGAAAAAGTCGCCAGAAGACAAGAGCTGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCATACACCATGGTATaGTTGAAGACGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSYTMV*LKTGLV
Trigger: CACCAACCCCGTCTTCAACCATACCATGGTGTATGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLQPKC*ESLPSS
Trigger: AGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTATGATGTCAGCACCGTaGATTTTGTCCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFMMSAP*ILSLCL
Trigger: AAGACACAGGGACAAAATCCACGGTGCTGACATCAT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACATATCAATCACACTaGAAGCTGGATCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITTYQSH*KLDPPN
Trigger: GTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLGAVE*ILPLLG
Trigger: CCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACATTTTCAGGCTCTGTaGATACAGTTTGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEHFQAL*IQFALV
Trigger: AACCAAAGCAAACTGTATCCACAGAGCCTGAAAATG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITSVFWL*GLELWY
Trigger: ATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAGATTCTCTCGTGGATaGTTAGGCCAGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHRFSRG*LGQVIG
Trigger: TCCTATCACCTGGCCTAACCATCCACGAGAGAATCT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTTGTGGGAGAGCTCTaGGTGATTCTGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHFVGEL*VILKLL
Trigger: GAGGAGTTTCAGAATCACCCAGAGCTCTCCCACAAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAGGGATCTCATCTCTTaGAGCAGACCCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHRDLIS*SRPRRH
Trigger: ATGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGCTTACCTTGCCGATaGTCTCTAAAACTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGLPCR*SLKLWS
Trigger: AGACCACAGTTTTAGAGACCATCGGCAAGGTAAGCC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTTGTGGGTGCCTTGTTaGGACAAATTCTCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLWVPC*DKFSEL
Trigger: TAACTCTGAGAATTTGTCCCAACAAGGCACCCACAA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTCATCAAAGACCACTaGTTTAGCTGTGACTTCACT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLIKDH*FSCDFT
Trigger: AGTGAAGTCACAGCTAAACCAGTGGTCTTTGATGAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCATTTTATGGTCTTCATaGAGTTGTGAGCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITILWSS*SCEHSG
Trigger: CCCTGAATGCTCACAACTTCATGAAGACCATAAAAT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHTCSSF*VCQGGK
Trigger: TTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCCCTCTTTTGAAATCTaGAATAAACCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIPSFEI*NKPAFP
Trigger: TGGAAAAGCTGGTTTATTTCAGATTTCAAAAGAGGG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACCCTCTTTTGAAATCTaGAATAAACCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEPSFEI*NKPAFP
Trigger: TGGAAAAGCTGGTTTATTTCAGATTTCAAAAGAGGG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGGTAGAATGTCTGAATaGCAAGGGATCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFGRMSE*QGISSL
Trigger: AAGAGATGAGATCCCTTGTCATTCAGACATTCTACC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTTTTGGACAATTCTaGTGGAAGCTTTGTAAAATG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAFGQF*WKLCKM
Trigger: CATTTTACAAAGCTTCCATCAGAATTGTCCAAAAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCTTCTGGATGAGATCTaGACCTGCCAAAATTCCAAC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLLDEI*TCQNSN
Trigger: GTTGGAATTTTGGCAGGTGCAGATCTCATCCAGAAG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTTGTATCAGGAACCGTaGAAAAAGAATGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLYQEP*KKNGSP
Trigger: AGGACTTCCATTCTTTTTGCACGGTTCCTGATACAA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCTCATCTTGAAGAAATaGTGGCACGGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLILKK*WHGLAH
Trigger: ATGAGCAAGTCCGTGCCAGCATTTCTTCAAGATGAG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHAVCSV*CPNPTF
Trigger: AAACGTGGGATTGGGACAGCAAACAGAACAAACAGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTTAAGATGGCGTCTTaGTCCTCCTCTGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHFKMAS*SSSVRK
Trigger: TTTCCTGACAGAGGAGGAGCAAGACGCCATCTTAAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCTGTGGATACAGTTTaGTTTGGTTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITSVDTV*FGFSNC
Trigger: GCAGTTAGAGAAACCAAAGCAAACTGTATCCACAGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITQVIGF*FSDQGC
Trigger: ACAACCTTGATCCGAAAAGCAAAATCCTATCACCTG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGTTAGACTTGAGAAGTaGATCACTATCTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITVRLEK*ITILAS
Trigger: ACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAAC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAGACTTGTTCTGTATTaGGTTCATCCATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHRLVLY*VHPFFL
Trigger: GAGAAAGAATGGATGAACCCAATACAGAACAAGTCT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTTCTTCCTCATCCTTaGCAAAACTTTTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLLPHP*QNFSHF
Trigger: AAAATGGGAAAAGTTTTGCCAAGGATGAGGAAGAAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTTCTTCCTCATCCTTaGCAAAACTTTTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELLPHP*QNFSHF
Trigger: AAAATGGGAAAAGTTTTGCCAAGGATGAGGAAGAAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTACATCAGTTGCTGCTaGTTTGGAAGGAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFYISCC*FGRKNN
Trigger: GTTGTTCTTCCTTCCAAACCAGCAGCAACTGATGTA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTTTCCAGAAGAACAATaGAGTGCTTATTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHFPEEQ*SAYFWT
Trigger: TGTCCAGAAATAAGCACTCCATTGTTCTTCTGGAAA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTTCCAGAAGAACAATaGAGTGCTTATTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFPEEQ*SAYFWT
Trigger: TGTCCAGAAATAAGCACTCCATTGTTCTTCTGGAAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTACATTCATTTGTATCTaGTTCTTGGTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASITFICI*FLVGFL
Trigger: CAAAAAGCCGACCAAGAACCAGATACAAATGAATGT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAACATTCATTTGTATCTaGTTCTTGGTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLETFICI*FLVGFL
Trigger: CAAAAAGCCGACCAAGAACCAGATACAAATGAATGT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATATCTTGAAGAAATGCTaGCACGGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHILKKC*HGLAHP
Trigger: AGGATGAGCAAGTCCGTGCCAGCATTTCTTCAAGAT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGATTGGTTAATGAGCTaGGGCTCTTCTTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHDWLMS*GSSCIS
Trigger: GGAGATACAAGAAGAGCCCCAGCTCATTAACCAATC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTACAGCTCTTGTCTTCTaGCGACTTTTTCTACTGGTA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFTALVF*RLFLLV
Trigger: TACCAGTAGAAAAAGTCGCCAGAAGACAAGAGCTGT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLQPKC*ESLPSS
Trigger: AGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCATTTTCAGGCTCTGTaGATACAGTTTGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITHFQAL*IQFALV
Trigger: AACCAAAGCAAACTGTATCCACAGAGCCTGAAAATG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSVFWL*GLELWY
Trigger: ATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTGTCTGGGAAAAGACTaGTTATCATCTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHCLGKD*LSSFSK
Trigger: CTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTGTCTGGGAAAAGACTaGTTATCATCTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASICLGKD*LSSFSK
Trigger: CTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTGTCTGGGAAAAGACTaGTTATCATCTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHCLGKD*LSSFSK
Trigger: CTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSPSVV*EKTGYH
Trigger: ATGATAACCAGTCTTTTCCCAGACAACGGAGGGACT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGTACTCTCCAAACCTTaGCTACCACCCTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHVLSKP*LPPLFS
Trigger: TGAAAACAAGGGTGGTAGCCAAGGTTTGGAGAGTAC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGTAGAATGTCTGAATaGCAAGGGATCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGRMSE*QGISSL
Trigger: AAGAGATGAGATCCCTTGTCATTCAGACATTCTACC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTTTTGGACAATTCTaGTGGAAGCTTTGTAAAATG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAFGQF*WKLCKM
Trigger: CATTTTACAAAGCTTCCATCAGAATTGTCCAAAAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTTTCACTTCTAGGTTaGCAAAGTCTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLSLLG*QSLHCK
Trigger: TTTACAGTGGAGACTTTGGCAACCTAGAAGTGAAAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTAAATGTATCCCGATaGCAAACGGACAGGTTCAAC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLNVSR*QTDRFN
Trigger: GTTGAACCTGTCCGTTTGGCATCGGGATACATTTAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGTCCCTGTGTCTTTTTaGCTTAGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFVPVSF*LSFIKP
Trigger: TGGTTTTATGAAGCTAAGGCAAAAAGACACAGGGAC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFQVIGF*FSDQGC
Trigger: ACAACCTTGATCCGAAAAGCAAAATCCTATCACCTG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCTTCAGTTCCATTTTaGAACTGGTCAGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSSVPF*NWSDSK
Trigger: TTTAGAATCTGACCAGTTGCAAAATGGAACTGAAGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCTTCAGTTCCATTTTaGAACTGGTCAGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: SFLIALPKTFLLRSPASISSVPF*NWSDSK
Trigger: TTTAGAATCTGACCAGTTGCAAAATGGAACTGAAGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTTTTGAGTCTGTTTaGTGTTTGAGATCTATTCCT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITAFESV*CLRSIP
Trigger: AGGAATAGATCTCAAACAGCAAACAGACTCAAAAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTGCTTGTTTTCACTATaGATTCTTGAATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHCLFSL*ILESLA
Trigger: AGCAAGAGATTCAAGAATCCATAGTGAAAACAAGCA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTTCTTCCTCATCCTTaGCAAAACTTTTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITLLPHP*QNFSHF
Trigger: AAAATGGGAAAAGTTTTGCCAAGGATGAGGAAGAAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCTGCTGAAGGACTGTaGTTCTCTTTCATCCACTTT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSAEGL*FSFIHF
Trigger: AAAGTGGATGAAAGAGAACCACAGTCCTTCAGCAGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACCGTGCAAAAAGAATaGAAGTCCTTATTTGGAACA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITTVQKE*KSLFGT
Trigger: TGTTCCAAATAAGGACTTCCATTCTTTTTGCACGGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCATTTTAGAGGCTCCTaGGCCATCCAAAATATGATG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHHFRGS*AIQNMM
Trigger: CATCATATTTTGGATGGCCCAGGAGCCTCTAAAATG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCCACTTTTGTTATCCTaGACATCTATCAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHPLLLS*TSINGP
Trigger: TGGCCCATTGATAGATGTCCAGGATAACAAAAGTGG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACATTCATTTGTATCTaGTTCTTGGTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITTFICI*FLVGFL
Trigger: CAAAAAGCCGACCAAGAACCAGATACAAATGAATGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTTTTCTACTGGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHFSTGI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACCAGTAGAAAA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTTTCTACTGGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFSTGI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACCAGTAGAAAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATACAGCTCTTGTCTTCTaGCGACTTTTTCTACTGGTA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHTALVF*RLFLLV
Trigger: TACCAGTAGAAAAAGTCGCCAGAAGACAAGAGCTGT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCTCCCAGAAACTGGTTaGTTAGTTTATAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLPETG*LVYNGP
Trigger: GGGACCATTATAAACTAACCAACCAGTTTCTGGGAG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATACATATCAATCACACTaGAAGCTGGATCCACCAAAC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHTYQSH*KLDPPN
Trigger: GTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTGTCTGGGAAAAGACTaGTTATCATCTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITCLGKD*LSSFSK
Trigger: CTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTAGGGACAGAACTTTaGAGCTGCCATTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLGTEL*SCHLIY
Trigger: ATAAATCAAATGGCAGCTTCAAAGTTCTGTCCCTAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTGTATCAGGAACCGTaGAAAAAGAATGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLYQEP*KKNGSP
Trigger: AGGACTTCCATTCTTTTTGCACGGTTCCTGATACAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCATCTCCTCCTAATTaGTTATCACACTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSSPPN*LSHWLI
Trigger: AATCAGCCAGTGTGATAAGCAATTAGGAGGAGATGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGTCCCTGTGTCTTTTTaGCTTAGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHVPVSF*LSFIKP
Trigger: TGGTTTTATGAAGCTAAGGCAAAAAGACACAGGGAC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCTGTGGATACAGTTTaGTTTGGTTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSVDTV*FGFSNC
Trigger: GCAGTTAGAGAAACCAAAGCAAACTGTATCCACAGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCTTCAGTTCCATTTTaGAACTGGTCAGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: IALPKTFLLRSPASISITSSVPF*NWSDSK
Trigger: TTTAGAATCTGACCAGTTGCAAAATGGAACTGAAGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCATTTTCAGGCTCTGTaGATACAGTTTGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHHFQAL*IQFALV
Trigger: AACCAAAGCAAACTGTATCCACAGAGCCTGAAAATG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTGTCTGGGAAAAGACTaGTTATCATCTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFCLGKD*LSSFSK
Trigger: CTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTAGGGACAGAACTTTaGAGCTGCCATTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLGTEL*SCHLIY
Trigger: ATAAATCAAATGGCAGCTTCAAAGTTCTGTCCCTAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCCCTCTTTTGAAATCTaGAATAAACCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHPSFEI*NKPAFP
Trigger: TGGAAAAGCTGGTTTATTTCAGATTTCAAAAGAGGG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR TCA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCTTTTGGACAATTCTaGTGGAAGCTTTGTAAAATG +
Preference number: 4 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHAFGQF*WKLCKM
Trigger: CATTTTACAAAGCTTCCATCAGAATTGTCCAAAAGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR GCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCTTCAGTTCCATTTTaGAACTGGTCAGATTCTAAA +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSSVPF*NWSDSK
Trigger: TTTAGAATCTGACCAGTTGCAAAATGGAACTGAAGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTGCTTGTTTTCACTATaGATTCTTGAATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFCLFSL*ILESLA
Trigger: AGCAAGAGATTCAAGAATCCATAGTGAAAACAAGCA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CCA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTTTCTACTGGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFFSTGI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACCAGTAGAAAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS TCA 90 bp TGTTCCATGGGACTTGGGCTTCTGAATCAGACCTTTTCAGAGCCCTaGGCAGGTCGTCACCGTCTGCAGGAAGGGTCCCCACTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: CSMGLGLLNQTFSEP*AGRHRLQEGSPLLL
Trigger: CAGAAGGAGTGGGGACCCTTCCTGCAGACGGTGACGACCTGCTCAGGGCTCTGAAAAGGTCTGATTCAGAAGCCCAAGTCCCATGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp TTTGGAACAACAGGGTCTGGAGCAGGCCATAGGGGACTCACTCTCTaGGGACATGAGGGTGTACCTGCTGTCTGCTCTCTTTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: FGTTGSGAGHRGLTL*GHEGVPAVCSLSGS
Trigger: GCTCCCTGAAAGAGAGCAGACAGCAGGTACACCCTCATGTCCTCAGAGAGTGAGTCCCCTATGGCCTGCTCCAGACCCTGTTGTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp GGGCTTACCTTGCCGATGGTCTCTAAAACTGTGGTCTGCTGTCTGTaGTGGCTCAGGCTCACCACACTGAGTCAGTTCATCGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GLTLPMVSKTVVCCL*WLRLTTLSQFIGRA
Trigger: AGCCCTTCCGATGAACTGACTCAGTGTGGTGAGCCTGAGCCATCACAGACAGCAGACCACAGTTTTAGAGACCATCGGCAAGGTAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp CTGTCTTCCTCTTCAGTGGGTACCACTTCAGCTGTTTGTTCTGTTTaGTGTCCCAATCCCACGTTTCCAGGTCGAGCTCCACCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: LSSSSVGTTSAVCSV*CPNPTFPGRAPPPP
Trigger: TGGGGGAGGTGGAGCTCGACCTGGAAACGTGGGATTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTACCCACTGAAGAGGAAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 90 bp CTGCCCCTCAACAGTGGGAGGTCAAGGCATTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGAAGCTTTTTGCCAGGGCTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: LPLNSGRSRHSFTQM*TSPVVGSFLPGLGS
Trigger: GGAACCAAGCCCTGGCAAAAAGCTTCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGAATGCCTTGACCTCCCACTGTTGAGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 90 bp TGGGGTATTTCCCCCATGAACCCTGCTTGCTCTACTTGCGAAGGCTaGTTCTCTAAAGTGTCTCTTCTCCCTGATGCCTGGAGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: WGISPMNPACSTCEG*FSKVSLLPDAWSWQ
Trigger: TTGCCAGCTCCAGGCATCAGGGAGAAGAGACACTTTAGAGAAGCAGCCTTCGCAAGTAGAGCAAGCAGGGTTCATGGGGGAAATACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp TCGGATCAAGGTTGTAATTTAAACGGAGGGTCTCTGAGTCCGTGCTaGTGGAACTGGAGTTGCGCTTTAGGATCCCTCTTGGAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SDQGCNLNGGSLSPC*WNWSCALGSLLEPL
Trigger: GAGGGGCTCCAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCCTCCGTTTAAATTACAACCTTGATCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp CAATCAGAAGCATCCGGAGGGGCAGCGTCGCTTCAACCCAAGTGTTaGGAGAGTTTACCATCTTCTCCCAGAGAGCAACTTCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: QSEASGGAASLQPKC*ESLPSSPREQLPQK
Trigger: CTTCTGAGGAAGTTGCTCTCTGGGAGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGCGACGCTGCCCCTCCGGATGCTTCTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 90 bp ACACAGCTGGAGTCCTCGTACTTTCCTGGGACATATCAATCACACTaGAAGCTGGATCCACCAAACTGGAACTTGGGCCTGCGGGATCTG +
Preference number: 5 (lower is better)
Translates to: TQLESSYFPGTYQSH*KLDPPNWNLGLRDL
Trigger: CAGATCCCGCAGGCCCAAGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAGTACGAGGACTCCAGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp GGTTTGTTGCAAGGAGTGATCTTCCGGCAGCTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGGCAGAGACACAGCTGGAGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GLLQGVIFRQLGAVE*ILPLLGQRHSWSPR
Trigger: ACGAGGACTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCCGGAAGATCACTCCTTGCAACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp GATCAAGGTTGTAATTTAAACGGAGGGTCTCTGAGTCCGTGCTGCTaGAACTGGAGTTGCGCTTTAGGATCCCTCTTGGAGCCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: DQGCNLNGGSLSPCC*NWSCALGSLLEPLS
Trigger: CGAGAGGGGCTCCAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCCTCCGTTTAAATTACAACCTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS TCA 90 bp GTCTTCCTTATCTCTGTAGCACATGGACCCACATGTGAGGATGTCTaGGCAGTGAGAGCCTTGAGAAGGGGCTTACCTTGCCGATGGTCT +
Preference number: 5 (lower is better)
Translates to: VFLISVAHGPTCEDV*AVRALRRGLPCRWS
Trigger: AGACCATCGGCAAGGTAAGCCCCTTCTCAAGGCTCTCACTGCTCAGACATCCTCACATGTGGGTCCATGTGCTACAGAGATAAGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp TGCGGGATCTGTGTCATCTTCTGGCTCTTCCACAACAGCTATCTCTaGCGCTGGGAGCTTCTTCCTTCTCATGGATGCTCTGATGATGTC +
Preference number: 5 (lower is better)
Translates to: CGICVIFWLFHNSYL*RWELLPSHGCSDDV
Trigger: GACATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGAGATAGCTGTTGTGGAAGAGCCAGAAGATGACACAGATCCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
CDS CCA 90 bp TGGAGTCCTCGTACTTTCCTGGGACATATCAATCACACTGGAAGCTaGATCCACCAAACTGGAACTTGGGCCTGCGGGATCTGTGTCATC +
Preference number: 5 (lower is better)
Translates to: WSPRTFLGHINHTGS*IHQTGTWACGICVI
Trigger: GATGACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAGTACGAGGACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCACCCAGCTCTCCTTaGCCCTCATTGCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSPSSP*PSLLCP
Trigger: AGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCCAGGGAGTCCCTCCGTaGTCTGGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVQGVPP*SGKRLV
Trigger: AACCAGTCTTTTCCCAGACAACGGAGGGACTCCCTG...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCTTTAGGATCCCTCTaGGAGCCCCTCTCGCATTCA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVALGSL*EPLSHS
Trigger: TGAATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 90 bp TTTTCGGATCAAGGTTGTAATTTAAACGGAGGGTCTCTGAGTCCGTaGTGCTGGAACTGGAGTTGCGCTTTAGGATCCCTCTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: FSDQGCNLNGGSLSP*CWNWSCALGSLLEP
Trigger: GGGCTCCAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCCTCCGTTTAAATTACAACCTTGATCCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp ATCCACCAAACTGGAACTTGGGCCTGCGGGATCTGTGTCATCTTCTaGCTCTTCCACAACAGCTATCTCTGGAGGAAGGACAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: IHQTGTWACGICVIF*LFHNSYLWRKDSIF
Trigger: AAAGATGCTGTCCTTCCTCCAGAGATAGCTGTTGTGGAAGAGCCAGAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp TTTCCTGGGACATATCAATCACACTGGAAGCTGGATCCACCAAACTaGAACTTGGGCCTGCGGGATCTGTGTCATCTTCTGGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: FPGTYQSHWKLDPPN*NLGLRDLCHLLALP
Trigger: TGGAAGAGCCAGAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp GGGGCTGTTGAATGGATTCTTCCTTTGCTTGGGCAGAGACACAGCTaGAGTCCTCGTACTTTCCTGGGACATATCAATCACACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: GAVEWILPLLGQRHS*SPRTFLGHINHTGS
Trigger: GCTTCCAGTGTGATTGATATGTCCCAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTCAACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp ATCTGTGTCATCTTCTGGCTCTTCCACAACAGCTATCTCTGCCGCTaGGAGCTTCTTCCTTCTCATGGATGCTCTGATGATGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: ICVIFWLFHNSYLCR*ELLPSHGCSDDVST
Trigger: GGTGCTGACATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGAGATAGCTGTTGTGGAAGAGCCAGAAGATGACACAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTTCTTTGGGGCTCTTaGGGGCTCTCCCTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLLWGS*GLSLSP
Trigger: AGGGCTCAGGGAGAGCCCCAAAGAGCCCCAAAGAAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGTTGTAGGAAGCTTTTaGCCAGGGCTTGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVVVGSF*PGLGSG
Trigger: TCCGGAACCAAGCCCTGGCAAAAAGCTTCCTACAAC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCACCCAGCTCTCCTTaGCCCTCATTGCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACSPSSP*PSLLCP
Trigger: AGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGGATTCTTCCTTTGCTaGGGCAGAGACACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVGFFLC*GRDTAG
Trigger: TCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGGCAGCTTGGGGCTGTaGAATGGATTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVGSLGL*NGFFLC
Trigger: GCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCAGGGAGTCCCTCCGTaGTCTGGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACQGVPP*SGKRLV
Trigger: AACCAGTCTTTTCCCAGACAACGGAGGGACTCCCTG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGCTTTAGGATCCCTCTaGGAGCCCCTCTCGCATTCA +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACALGSL*EPLSHS
Trigger: TGAATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS TCA 90 bp CTAAAACTGTGGTCTGCTGTCTGTGATGGCTCAGGCTCACCACACTaGGTCAGTTCATCGGAAGGGCTTTTGGACAATTCTGATGGAAGC +
Preference number: 5 (lower is better)
Translates to: LKLWSAVCDGSGSPH*VSSSEGLLDNSDGS
Trigger: GCTTCCATCAGAATTGTCCAAAAGCCCTTCCGATGAACTGACTCAGTGTGGTGAGCCTGAGCCATCACAGACAGCAGACCACAGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 90 bp CTTATTCTGCTCAGCTGCCGCTGGGAGCTTCTTCCTTCTCATGGATaGTCTGATGATGTCAGCACCGTGGATTTTGTCCCTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LILLSCRWELLPSHG*SDDVSTVDFVPVSF
Trigger: AAAAGACACAGGGACAAAATCCACGGTGCTGACATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 90 bp AGGAAGGACAGCATCTTTGTTAACATTATTCACCCAGCTCTCCTTTaGCCTCATTGCTGTGTCCTTATTCTGCTCAGCTGCCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RKDSIFVNIIHPALL*PHCCVLILLSCRWE
Trigger: CTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 90 bp CACAACAGCTATCTCTGCCGCTGGGAGCTTCTTCCTTCTCATGGATaGTCTGATGATGTCAGCACCGTGGATTTTGTCCCTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: HNSYLCRWELLPSHG*SDDVSTVDFVPVSF
Trigger: AAAAGACACAGGGACAAAATCCACGGTGCTGACATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGAGATAGCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
CDS CCA 90 bp TCTGTTTTCTGTCTCGAGGGCAACTGGTGCTGTCTTCCTCTTCAGTaGGTACCACTTCAGCTGTTTGTTCTGTTTGCTGTCCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: SVFCLEGNWCCLPLQ*VPLQLFVLFAVPIP
Trigger: TGGGATTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTACCCACTGAAGAGGAAGACAGCACCAGTTGCCCTCGAGACAGAAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGAGGAGCTGCTAAGATaGGTTAATGAGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAEELLR*VNELGL
Trigger: GAGCCCCAGCTCATTAACCAATCTTAGCAGCTCCTC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGTTGTAGGAAGCTTTTaGCCAGGGCTTGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAVVGSF*PGLGSG
Trigger: TCCGGAACCAAGCCCTGGCAAAAAGCTTCCTACAAC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGGATTCTTCCTTTGCTaGGGCAGAGACACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAGFFLC*GRDTAG
Trigger: TCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGAATGGATTCTTCCTTaGCTTGGGCAGAGACACAGC +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVEWILP*LGQRHS
Trigger: GCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGGCAGCTTGGGGCTGTaGAATGGATTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAGSLGL*NGFFLC
Trigger: GCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCTGCTGGAACTGGAGTaGCGCTTTAGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACLLELE*RFRIPL
Trigger: AAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGACGGGTCTAGGACTTaGTGGAAGCTCATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVDGSRT*WKLILH
Trigger: GTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGAGAAGGGGCTTACCTaGCCGATGGTCTCTAAAACT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVEKGLT*PMVSKT
Trigger: AGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCTC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTTTCTCTCTCAGCACTaGGTTCTTGGGGTCCTCACT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVFLSQH*VLGVLT
Trigger: AGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACGGTCGCTCACTCGCTaGTATTTCTCTCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPARSLTR*YFSLST
Trigger: AGTGCTGAGAGAGAAATACAAGCGAGTGAGCGACCG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp AGCTCCACCTCCCCCAGAAAGCTGTTGCGCTTAAATGTATCCCGATaGCAAACGGACAGGTTCAACTTCTGCGTCTTTAAGAATTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSTSPRKLLRLNVSR*QTDRFNFCVFKNCL
Trigger: AAGGCAATTCTTAAAGACGCAGAAGTTGAACCTGTCCGTTTGGCATCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGAGGTGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 90 bp AGCATCTTTGTTAACATTATTCACCCAGCTCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTCAGCTGCCGCTGGGAGCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SIFVNIIHPALLCPH*CVLILLSCRWELLP
Trigger: AGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGAATAATGTTAACAAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 90 bp GACATGACTTGTGACTTCCTGGGCTGGTGTGCTTTAGCAGAAAGCTaGTGGCTGCAAGAAGATGTGAGCTGTGATGCCTTTAACTTAGCA +
Preference number: 5 (lower is better)
Translates to: DMTCDFLGWCALAES*WLQEDVSCDAFNLA
Trigger: TGCTAAGTTAAAGGCATCACAGCTCACATCTTCTTGCAGCCAGCAGCTTTCTGCTAAAGCACACCAGCCCAGGAAGTCACAAGTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp TGGAGAACTGGAAACTCCATCAAAACAATGGGGAAGCTGAGCCAATaGAGGAGAGCCTTCTGCAGCCAACTGAAGCATAGCTTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: WRTGNSIKTMGKLSQ*RRAFCSQLKHSFCV
Trigger: AACACAGAAGCTATGCTTCAGTTGGCTGCAGAAGGCTCTCCTCCATTGGCTCAGCTTCCCCATTGTTTTGATGGAGTTTCCAGTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp AAAGATATTCGGTCGCTCACTCGCTTGTATTTCTCTCTCAGCACTTaGTTCTTGGGGTCCTCACTGGCTTCTTTTTGGTCCTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: KDIRSLTRLYFSLST*FLGSSLASFWSSGF
Trigger: GAAGCCTGAGGACCAAAAAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAATACAAGCGAGTGAGCGACCGAATATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp ATGACTTGTGACTTCCTGGGCTGGTGTGCTTTAGCAGAAAGCTGCTaGCTGCAAGAAGATGTGAGCTGTGATGCCTTTAACTTAGCACCA +
Preference number: 5 (lower is better)
Translates to: MTCDFLGWCALAESC*LQEDVSCDAFNLAP
Trigger: TGGTGCTAAGTTAAAGGCATCACAGCTCACATCTTCTTGCAGCCAGCAGCTTTCTGCTAAAGCACACCAGCCCAGGAAGTCACAAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGACTTGCTCATCCTTTaGAGTTTGTCAGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVDLLIL*SLSGWE
Trigger: TTCCCACCCTGACAAACTCAAAAGGATGAGCAAGTC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAATGCTGGCACGGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGTCATCGCTCTCATCTaGAAGAAATGCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACVIALI*KKCWHG
Trigger: TCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGAC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATCCCCCAGAAAGCTGTaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSCLFC*LSQSHV
Trigger: AACGTGGGATTGGGACAGCAAACAGAACAAACAGCT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVASTQV*GEFTIF
Trigger: GAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTCCTTTGCCCTCATaGCTGTGTCCTTATTCTGCT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSPLPS*LCPYSA
Trigger: AGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCAGGGAGTCCCTCCGTaGTCTGGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITQGVPP*SGKRLV
Trigger: AACCAGTCTTTTCCCAGACAACGGAGGGACTCCCTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGACGGGTCTAGGACTTaGTGGAAGCTCATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPADGSRT*WKLILH
Trigger: GTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCGACGGGTCTAGGACTTaGTGGAAGCTCATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACDGSRT*WKLILH
Trigger: GTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTC...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCCACTCGCCTCATCTaGAAGAAATGCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITATRLI*KKCWHG
Trigger: TCCGTGCCAGCATTTCTTCAAGATGAGGCGAGTGGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107210.3
ENSMUST00000190365.8
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTTCCAGACAGGTATaGTCTGTCATCAAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSSRQV*SVIKAL
Trigger: CAACGCCTTGATGACAGACAATACCTGTCTGGAAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp TGCGGGATCTGTGTCATCTTCTGGCTCTTCCACAACAGCTATCTCTaGAGGAAGGACAGCATCTTTGTTAACATTATTCACCCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: CGICVIFWLFHNSYL*RKDSIFVNIIHPAL
Trigger: GAGAGCTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCCTCCAGAGATAGCTGTTGTGGAAGAGCCAGAAGATGACACAGATCCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp TCCCTCTTGGAGCCCCTCTCGCATTCAGGGAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCATCTTTCTCTAAGTCATTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: SLLEPLSHSGSPSVV*EKTGYHLSLSHLIC
Trigger: ACAAATCAAATGACTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACAACGGAGGGACTCCCTGAATGCGAGAGGGGCTCCAAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp CCTGCGACTTGGGATTCTGTAGGTTTCAAATCGTTGCAGTGTATCTaGACCTTCCTTGTGGGTGCCTTGTTGGGACAAATTCTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: PATWDSVGFKSLQCI*TFLVGALLGQILRV
Trigger: AACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGATTTGAAACCTACAGAATCCCAAGTCGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp TCTTCTTTACCTAAGCTTTCAGGATGGTTAGTGTTCCATGGGACTTaGGCTTCTGAATCAGACCTTTTCAGAGCCCTGAGCAGGTCGTCA +
Preference number: 5 (lower is better)
Translates to: SSLPKLSGWLVFHGT*ASESDLFRALSRSS
Trigger: TGACGACCTGCTCAGGGCTCTGAAAAGGTCTGATTCAGAAGCCCAAGTCCCATGGAACACTAACCATCCTGAAAGCTTAGGTAAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp GGCCTGGTTGTTTCAGGTTTATTTGAGGAATCAAAACGTGAGAGATaGGGTGCTTGGCCATCCTCATCAAAGACCACTGGTTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLVVSGLFEESKRER*GAWPSSSKTTGLAV
Trigger: CACAGCTAAACCAGTGGTCTTTGATGAGGATGGCCAAGCACCCCATCTCTCACGTTTTGATTCCTCAAATAAACCTGAAACAACCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTTCTTTGGGGCTCTTaGGGGCTCTCCCTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLLWGS*GLSLSP
Trigger: AGGGCTCAGGGAGAGCCCCAAAGAGCCCCAAAGAAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTGCTGATTTCTTCTTaGGGGCTCTTTGGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLLISS*GLFGAL
Trigger: GAGAGCCCCAAAGAGCCCCAAAGAAGAAATCAGCAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGACTTGCTCATCCTTTaGAGTTTGTCAGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPADLLIL*SLSGWE
Trigger: TTCCCACCCTGACAAACTCAAAAGGATGAGCAAGTC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTT +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPASCLFC*LSQSHV
Trigger: AACGTGGGATTGGGACAGCAAACAGAACAAACAGCT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVYHFSC*FCLLSQ
Trigger: TTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGTTGTAGGAAGCTTTTaGCCAGGGCTTGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITVVGSF*PGLGSG
Trigger: TCCGGAACCAAGCCCTGGCAAAAAGCTTCCTACAAC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTCTCCTTTGCCCTCATaGCTGTGTCCTTATTCTGCT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACSPLPS*LCPYSA
Trigger: AGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCACCCAGCTCTCCTTaGCCCTCATTGCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESPSSP*PSLLCP
Trigger: AGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGGCAGCTTGGGGCTGTaGAATGGATTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITGSLGL*NGFFLC
Trigger: GCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTCGGGTTTGGTTTGTaGCAAGGAGTGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLGFGL*QGVIFR
Trigger: CCGGAAGATCACTCCTTGCAACAAACCAAACCCGAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCATCAGTTTTCTGGCTTaGGGGATTGGAGCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVISFLA*GIGALV
Trigger: TACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGAT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCAGGGAGTCCCTCCGTaGTCTGGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHQGVPP*SGKRLV
Trigger: AACCAGTCTTTTCCCAGACAACGGAGGGACTCCCTG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGCTTTAGGATCCCTCTaGGAGCCCCTCTCGCATTCA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHALGSL*EPLSHS
Trigger: TGAATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTGCTGGAACTGGAGTaGCGCTTTAGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLLELE*RFRIPL
Trigger: AAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCTCTGTCATCAAGGCGTaGCTAATCTGTGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVSVIKA*LICAFE
Trigger: CTCAAAAGCACAGATTAGCAACGCCTTGATGACAGA...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGTATCTGGACCTTCCTaGTGGGTGCCTTGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHVSGPS*WVPCWD
Trigger: GTCCCAACAAGGCACCCACAAGGAAGGTCCAGATAC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCTCAGCACTTGGTTCTaGGGGTCCTCACTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHLSTWF*GSSLAS
Trigger: AGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGAG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCAACTTAGCACCAGCTTaGCCTCCTTCCCAAAAAGAT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVNLAPA*PPSQKD
Trigger: ATCTTTTTGGGAAGGAGGCAAAGCTGGTGCTAAGTT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp CTAGGACTTTGTGGAAGCTCATTCTTCACGGCAGAGAATCTCACGTaGTTTAACGGCTCTAGTGAGCTTGTGGAAGAGTCGTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: LGLCGSSFFTAENLT*FNGSSELVEESSSK
Trigger: TTTAGAAGACGACTCTTCCACAAGCTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGCCGTGAAGAATGAGCTTCCACAAAGTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCAGCATTTACATCAGTaGCTGCTGGTTTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACQHLHQ*LLVWKE
Trigger: TTCCTTCCAAACCAGCAGCAACTGATGTAAATGCTG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCACCTCAAACCCACTTTaGTTATCCTGGACATCTATC +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVTSNPL*LSWTSI
Trigger: GATAGATGTCCAGGATAACAAAAGTGGGTTTGAGGT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGTCATCGCTCTCATCTaGAAGAAATGCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITVIALI*KKCWHG
Trigger: TCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGAC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGAGGAGCTGCTAAGATaGGTTAATGAGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEEELLR*VNELGL
Trigger: GAGCCCCAGCTCATTAACCAATCTTAGCAGCTCCTC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGAGGAGCTGCTAAGATaGGTTAATGAGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHEELLR*VNELGL
Trigger: GAGCCCCAGCTCATTAACCAATCTTAGCAGCTCCTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAFFLPI*PLSGSR
Trigger: TCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCACGAGTGTCTTCTTCTaGCCCATTTTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACTSVFF*PILPLS
Trigger: AGACAAAGGCAAAATGGGCAAGAAGAAGACACTCGT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAYHFSC*FCLLSQ
Trigger: TTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCTACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACYHFSC*FCLLSQ
Trigger: TTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTA...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGTTGTAGGAAGCTTTTaGCCAGGGCTTGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEVVGSF*PGLGSG
Trigger: TCCGGAACCAAGCCCTGGCAAAAAGCTTCCTACAAC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGTTGTAGGAAGCTTTTaGCCAGGGCTTGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHVVGSF*PGLGSG
Trigger: TCCGGAACCAAGCCCTGGCAAAAAGCTTCCTACAAC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCATTTTCCCTACAGCTCTaGTCTTCTGGCGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAFSLQL*SSGDFF
Trigger: GAAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTCACCCAGCTCTCCTTaGCCCTCATTGCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITSPSSP*PSLLCP
Trigger: AGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGGATTCTTCCTTTGCTaGGGCAGAGACACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEGFFLC*GRDTAG
Trigger: TCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGAATGGATTCTTCCTTaGCTTGGGCAGAGACACAGC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITEWILP*LGQRHS
Trigger: GCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATCTCGGGTTTGGTTTGTaGCAAGGAGTGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHLGFGL*QGVIFR
Trigger: CCGGAAGATCACTCCTTGCAACAAACCAAACCCGAG...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCTCGGGTTTGGTTTGTaGCAAGGAGTGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASILGFGL*QGVIFR
Trigger: CCGGAAGATCACTCCTTGCAACAAACCAAACCCGAG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCCAGCTTTTCCAGTTTTaGACTGCTCGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACQLFQF*TARVWF
Trigger: AAACCAAACCCGAGCAGTCAAAAACTGGAAAAGCTG...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCACAGCTTTTCCAGTTTTaGACTGCTCGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAQLFQF*TARVWF
Trigger: AAACCAAACCCGAGCAGTCAAAAACTGGAAAAGCTG...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTTTAGGATCCCTCTaGGAGCCCCTCTCGCATTCA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITALGSL*EPLSHS
Trigger: TGAATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTGCTGGAACTGGAGTaGCGCTTTAGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELLELE*RFRIPL
Trigger: AAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGACGGGTCTAGGACTTaGTGGAAGCTCATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITDGSRT*WKLILH
Trigger: GTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAAGGGATCTCATCTCTaGGAGCAGACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITKGSHL*EQTQKT
Trigger: TGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCTT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTGGGCATTGGGACTTTaGAGTCGTCTTCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITWALGL*SRLLPD
Trigger: GTCTGGAAGAAGACGACTCAAAAGTCCCAATGCCCA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGTATCTGGACCTTCCTaGTGGGTGCCTTGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITVSGPS*WVPCWD
Trigger: GTCCCAACAAGGCACCCACAAGGAAGGTCCAGATAC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTCACTGGCTTCTTTTaGGTCCTCAGGCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLTGFF*VLRLLP
Trigger: TGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTCAGCACTTGGTTCTaGGGGTCCTCACTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITLSTWF*GSSLAS
Trigger: AGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp TGGCAGATAAGTGAGACCGACCTTCATGAGTTGTATCAGGAACCGTaGAAAAAGAATGGAAGTCCTTATTTGGAACAACAGGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: WQISETDLHELYQEP*KKNGSPYLEQQGLE
Trigger: CTCCAGACCCTGTTGTTCCAAATAAGGACTTCCATTCTTTTTGCACGGTTCCTGATACAACTCATGAAGGTCGGTCTCACTTATCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp GTGGGTGCCTTGTTGGGACAAATTCTCAGAGTTAGACTTGAGAAGTaGATCACTATCTTGGCAAGTTACAGAAACCAGCATAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VGALLGQILRVRLEK*ITILASYRNQHSSF
Trigger: GAAGGAGCTATGCTGGTTTCTGTAACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp TTTTGCAACTGGTCAGATTCTAAAACAGTAAATTCTCCCACTTCCTaGCCAAGGACGGGTCTAGGACTTTGTGGAAGCTCATTCTTCACG +
Preference number: 5 (lower is better)
Translates to: FCNWSDSKTVNSPTS*PRTGLGLCGSSFFT
Trigger: CGTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTCCTTGGCCAGGAAGTGGGAGAATTTACTGTTTTAGAATCTGACCAGTTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCACTTCTTCCTCATCCTaGGCAAAACTTTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVTSSSS*AKLFPF
Trigger: AAATGGGAAAAGTTTTGCCAAGGATGAGGAAGAAGT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGAATTCAGAAGAAAGTaGATGGGACATCTCACAGCT +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAEFRRK*MGHLTA
Trigger: AGCTGTGAGATGTCCCATCAACTTTCTTCTGAATTC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCACCTCAAACCCACTTTaGTTATCCTGGACATCTATC +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACTSNPL*LSWTSI
Trigger: GATAGATGTCCAGGATAACAAAAGTGGGTTTGAGGT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAATGCTGGCACGGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCCCCCAGAAAGCTGTaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCCCCCAGAAAGCTGTaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCCCCCAGAAAGCTGTaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITASTQV*GEFTIF
Trigger: GAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGC...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCACCCAGCTCTCCTTaGCCCTCATTGCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSPSSP*PSLLCP
Trigger: AGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAGGAAGGACAGCATCTTaGTTAACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPAGRTAS*LTLFTQ
Trigger: CTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCC...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGAATGGATTCTTCCTTaGCTTGGGCAGAGACACAGC +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEEWILP*LGQRHS
Trigger: GCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTTCTGGCTTTGGGGATaGGAGCTTTGGTATGAGACG +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHFWLWG*ELWYET
Trigger: CGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGAA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTCTGGCTTTGGGGATaGGAGCTTTGGTATGAGACG +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFWLWG*ELWYET
Trigger: CGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTGCTGGAACTGGAGTaGCGCTTTAGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITLLELE*RFRIPL
Trigger: AAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGACGGGTCTAGGACTTaGTGGAAGCTCATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIDGSRT*WKLILH
Trigger: GTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATAAGGGATCTCATCTCTaGGAGCAGACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHKGSHL*EQTQKT
Trigger: TGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCTT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATAAGGGATCTCATCTCTaGGAGCAGACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHKGSHL*EQTQKT
Trigger: TGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCTT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGAGAAGGGGCTTACCTaGCCGATGGTCTCTAAAACT +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHEKGLT*PMVSKT
Trigger: AGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCTTGTGGGTGCCTTGTaGGGACAAATTCTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITLVGAL*GQILRV
Trigger: AACTCTGAGAATTTGTCCCAACAAGGCACCCACAAG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACTCACTGGCTTCTTTTaGGTCCTCAGGCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLELTGFF*VLRLLP
Trigger: TGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGAG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTTTCTCTCTCAGCACTaGGTTCTTGGGGTCCTCACT +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHFLSQH*VLGVLT
Trigger: AGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp TCTCAGAGATTCTCTCGTGGATGGTTAGGCCAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGTAATTTAAACGGAGGGTCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SQRFSRGWLGQVIGF*FSDQGCNLNGGSLS
Trigger: ACTCAGAGACCCTCCGTTTAAATTACAACCTTGATCCGAAAAGCAAAATCCTATCACCTGGCCTAACCATCCACGAGAGAATCTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp TCACGGCAGAGAATCTCACGTGCTTTAACGGCTCTAGTGAGCTTGTaGAAGAGTCGTCTTCTAAAGAAAATTCCTTCTCAGAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: SRQRISRALTALVSL*KSRLLKKIPSQRFS
Trigger: AGAGAATCTCTGAGAAGGAATTTTCTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGCCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 90 bp GTTTCAGGTTTATTTGAGGAATCAAAACGTGAGAGATGGGGTGCTTaGCCATCCTCATCAAAGACCACTGGTTTAGCTGTGACTTCACTA +
Preference number: 5 (lower is better)
Translates to: VSGLFEESKRERWGA*PSSSKTTGLAVTSL
Trigger: TAGTGAAGTCACAGCTAAACCAGTGGTCTTTGATGAGGATGGCCAAGCACCCCATCTCTCACGTTTTGATTCCTCAAATAAACCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CCCAGGAGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGAGTGACTATAGACTaGTTCTGTATTGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: PRSFLIALPKTFLLRSPARVTID*FCIGFI
Trigger: GATGAACCCAATACAGAACAAGTCTATAGTCACTCT...TGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCAGAGTGACTATAGACTaGTTCTGTATTGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACRVTID*FCIGFI
Trigger: GATGAACCCAATACAGAACAAGTCTATAGTCACTCT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCGGCACAGAAGTTTGTTaGTTTGTTGCTGTATTATTC +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVGTEVC*FVAVLF
Trigger: GAATAATACAGCAACAAACAAACAAACTTCTGTGCC...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAGTCCGGGTGTGTGTGGGATTTCTCAAGGCAGATTTATGAGCAGTGAAGTCACCTTTTCTCTGCCTTaGTCCTCTACAAATTGTATA +
Preference number: 5 (lower is better)
Translates to: RSPGVCGISQGRFMSSEVTFSLP*SSTNCI
Trigger: TATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGT...GACTTCACTGCTCATAAATCTGCCTTGAGAAATCCCACACACACCCGGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCCCTTGCTCTTCCTCTaGTCTCTTATATGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHPLLFL*SLIWCC
Trigger: GCAACACCATATAAGAGACAAGAGGAAGAGCAAGGG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTCCCTTGCTCTTCCTCTaGTCTCTTATATGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIPLLFL*SLIWCC
Trigger: GCAACACCATATAAGAGACAAGAGGAAGAGCAAGGG...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACMSSRL*EGNFLA
Trigger: TGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACAT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGACTTGCTCATCCTTTaGAGTTTGTCAGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHDLLIL*SLSGWE
Trigger: TTCCCACCCTGACAAACTCAAAAGGATGAGCAAGTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGACTTGCTCATCCTTTaGAGTTTGTCAGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIDLLIL*SLSGWE
Trigger: TTCCCACCCTGACAAACTCAAAAGGATGAGCAAGTC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGACTTGCTCATCCTTTaGAGTTTGTCAGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEDLLIL*SLSGWE
Trigger: TTCCCACCCTGACAAACTCAAAAGGATGAGCAAGTC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAAATGCTGGCACGGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLENAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATAATGCTGGCACGGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAATGCTGGCACGGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASINAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGTCATCGCTCTCATCTaGAAGAAATGCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITVIALI*KKCWHG
Trigger: TCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGAC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITFFLPI*PLSGSR
Trigger: TCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTT +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASISCLFC*LSQSHV
Trigger: AACGTGGGATTGGGACAGCAAACAGAACAAACAGCT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTTTTCCCTACAGCTCTaGTCTTCTGGCGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITFSLQL*SSGDFF
Trigger: GAAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHASTQV*GEFTIF
Trigger: GAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEASTQV*GEFTIF
Trigger: GAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGC...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCTCCTTTGCCCTCATaGCTGTGTCCTTATTCTGCT +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSPLPS*LCPYSA
Trigger: AGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATTCTCCTTTGCCCTCATaGCTGTGTCCTTATTCTGCT +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHSPLPS*LCPYSA
Trigger: AGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGA...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTCGGGTTTGGTTTGTaGCAAGGAGTGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLGFGL*QGVIFR
Trigger: CCGGAAGATCACTCCTTGCAACAAACCAAACCCGAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGCAGCTTTTCCAGTTTTaGACTGCTCGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITQLFQF*TARVWF
Trigger: AAACCAAACCCGAGCAGTCAAAAACTGGAAAAGCTG...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGATCAGTTTTCTGGCTTaGGGGATTGGAGCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITISFLA*GIGALV
Trigger: TACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGAT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCTTTAGGATCCCTCTaGGAGCCCCTCTCGCATTCA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHALGSL*EPLSHS
Trigger: TGAATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTCTGCTGGAACTGGAGTaGCGCTTTAGGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFLLELE*RFRIPL
Trigger: AAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAG...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAGGGATCTCATCTCTaGGAGCAGACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITKGSHL*EQTQKT
Trigger: TGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCTT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCCACTCGCCTCATCTaGAAGAAATGCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHATRLI*KKCWHG
Trigger: TCCGTGCCAGCATTTCTTCAAGATGAGGCGAGTGGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107210.3
ENSMUST00000190365.8
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTCCTTGTGGGTGCCTaGTTGGGACAAATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFLVGA*LGQILR
Trigger: TCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGCTCCCCTTACTTTTTaGAGGCAGATGGAATTCGGT +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIAPLTF*RQMEFG
Trigger: ACCGAATTCCATCTGCCTCAAAAAAGTAAGGGGAGC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATACATCAGGGGCCTGGTaGTTTCAGGTTTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHTSGAW*FQVYLR
Trigger: CCTCAAATAAACCTGAAACAACCAGGCCCCTGATGT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp TCTATTCCTTGGAGATGTTGGAGGGATGACATAGTGTCCTCTGTATaGGAACTTCGGTTAAACCAGTCTAGGACTTTAGATATGGACTCG +
Preference number: 5 (lower is better)
Translates to: SIPWRCWRDDIVSSV*ELRLNQSRTLDMDS
Trigger: CGAGTCCATATCTAAAGTCCTAGACTGGTTTAACCGAAGTTCTCATACAGAGGACACTATGTCATCCCTCCAACATCTCCAAGGAATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp CAGACAGGTATTGTCTGTCATCAAGGCGTTGCTAATCTGTGCTTTTaGGTCTGTTTGCTGTTTGAGATCTATTCCTTGGAGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: QTGIVCHQGVANLCF*VCLLFEIYSLEMLE
Trigger: CTCCAACATCTCCAAGGAATAGATCTCAAACAGCAAACAGACTCAAAAGCACAGATTAGCAACGCCTTGATGACAGACAATACCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp CTTATTTCTGGACACACTCATTTCTTTAGGAGCTTCTTCAAAGCCTaGTTCCTGGGAAGCCTGTGTTTCTCCTGTAATGACCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LISGHTHFFRSFFKA*FLGSLCFSCNDLFS
Trigger: AGAGAAAAGGTCATTACAGGAGAAACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCTCCTAAAGAAATGAGTGTGTCCAGAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp TGGGACAAATTCTCAGAGTTAGACTTGAGAAGTGCATCACTATCTTaGCAAGTTACAGAAACCAGCATAGCTCCTTCTTCTTGGAATGCC +
Preference number: 5 (lower is better)
Translates to: WDKFSELDLRSASLS*QVTETSIAPSSWNA
Trigger: GGCATTCCAAGAAGAAGGAGCTATGCTGGTTTCTGTAACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCTGCTGATTTCTTCTTaGGGGCTCTTTGGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHLLISS*GLFGAL
Trigger: GAGAGCCCCAAAGAGCCCCAAAGAAGAAATCAGCAG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATCAGTTGCTGCTGGTTaGGAAGGAAGAACAACTTTC +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLESVAAG*EGRTTF
Trigger: GAAAGTTGTTCTTCCTTCCAAACCAGCAGCAACTGA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTCAGTTGCTGCTGGTTaGGAAGGAAGAACAACTTTC +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHSVAAG*EGRTTF
Trigger: GAAAGTTGTTCTTCCTTCCAAACCAGCAGCAACTGA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAACAGCATTTACATCAGTaGCTGCTGGTTTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEQHLHQ*LLVWKE
Trigger: TTCCTTCCAAACCAGCAGCAACTGATGTAAATGCTG...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCCCTTGCTCTTCCTCTaGTCTCTTATATGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITPLLFL*SLIWCC
Trigger: GCAACACCATATAAGAGACAAGAGGAAGAGCAAGGG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGAGGAGCTGCTAAGATaGGTTAATGAGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHEELLR*VNELGL
Trigger: GAGCCCCAGCTCATTAACCAATCTTAGCAGCTCCTC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHFFLPI*PLSGSR
Trigger: TCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIFFLPI*PLSGSR
Trigger: TCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAACGAGTGTCTTCTTCTaGCCCATTTTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLETSVFF*PILPLS
Trigger: AGACAAAGGCAAAATGGGCAAGAAGAAGACACTCGT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATACGAGTGTCTTCTTCTaGCCCATTTTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHTSVFF*PILPLS
Trigger: AGACAAAGGCAAAATGGGCAAGAAGAAGACACTCGT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTACCGCAATATCTCGTaGTATACAGGATTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITYRNIS*YTGFKV
Trigger: GACCTTGAATCCTGTATACAACGAGATATTGCGGTA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCCCCCAGAAAGCTGTaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEYHFSC*FCLLSQ
Trigger: TTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIYHFSC*FCLLSQ
Trigger: TTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGCTTTTTGCCAGGGCTaGGTTCCGGAACATACTGGA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHAFCQG*VPEHTG
Trigger: TCCAGTATGTTCCGGAACCAAGCCCTGGCAAAAAGC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGTTGTAGGAAGCTTTTaGCCAGGGCTTGGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHVVGSF*PGLGSG
Trigger: TCCGGAACCAAGCCCTGGCAAAAAGCTTCCTACAAC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATTTTCCCTACAGCTCTaGTCTTCTGGCGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEFSLQL*SSGDFF
Trigger: GAAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGATTCTTCCTTTGCTaGGGCAGAGACACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGFFLC*GRDTAG
Trigger: TCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGCAGCTTGGGGCTGTaGAATGGATTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGSLGL*NGFFLC
Trigger: GCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCAGCTTTTCCAGTTTTaGACTGCTCGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHQLFQF*TARVWF
Trigger: AAACCAAACCCGAGCAGTCAAAAACTGGAAAAGCTG...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCAAACGGCAGGCCTGCACAACTCACCCTCTTTaGAAATCTGAAATAAACCAG +
Preference number: 5 (lower is better)
Translates to: TFLLRSPASISITKRQACTTHPL*KSEINQ
Trigger: CTGGTTTATTTCAGATTTCAAAAGAGGGTGAGTTGT...GCAGGCCTGCCGTTTGGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTCTGGCTTTGGGGATaGGAGCTTTGGTATGAGACG +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFFWLWG*ELWYET
Trigger: CGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAATCAGTTTTCTGGCTTaGGGGATTGGAGCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEISFLA*GIGALV
Trigger: TACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGAT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTATCAGTTTTCTGGCTTaGGGGATTGGAGCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIISFLA*GIGALV
Trigger: TACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGAT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATATCAGTTTTCTGGCTTaGGGGATTGGAGCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHISFLA*GIGALV
Trigger: TACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGAT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCTGTCATCAAGGCGTaGCTAATCTGTGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASISVIKA*LICAFE
Trigger: CTCAAAAGCACAGATTAGCAACGCCTTGATGACAGA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCTTGTGGGTGCCTTGTaGGGACAAATTCTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITLVGAL*GQILRV
Trigger: AACTCTGAGAATTTGTCCCAACAAGGCACCCACAAG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCTTCCTTGTGGGTGCCTaGTTGGGACAAATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITFLVGA*LGQILR
Trigger: TCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAA...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTAGGAGGGAAGTCTTCTaGGTTTTGCTTTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIRREVF*VLLFLS
Trigger: AGAGAGGAAAAGCAAAACCAAGAAGACTTCCCTCCT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCGGTCGCTCACTCGCTaGTATTTCTCTCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHRSLTR*YFSLST
Trigger: AGTGCTGAGAGAGAAATACAAGCGAGTGAGCGACCG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp CATCCTTTTGAGTTTGTCAGGGTGGGAAAACTGATTATCAGGCAGTaGAGGCACTGTGGAAATTCCTGGTATACATTCATTTGTATCTGG +
Preference number: 5 (lower is better)
Translates to: HPFEFVRVGKLIIRQ*RHCGNSWYTFICIW
Trigger: CCAGATACAAATGAATGTATACCAGGAATTTCCACAGTGCCTTCACTGCCTGATAATCAGTTTTCCCACCCTGACAAACTCAAAAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 90 bp TGTATACAGGATTCAAGGTCTTCTTCACTACGAGTGTCTTCTTCTTaGCCATTTTGCCTTTGTCTGGTAGCAGATAGGTCTTTACATACG +
Preference number: 5 (lower is better)
Translates to: CIQDSRSSSLRVSSS*PFCLCLVADRSLHT
Trigger: CGTATGTAAAGACCTATCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAAGACACTCGTAGTGAAGAAGACCTTGAATCCTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 90 bp CATCTTTCTCTAAGTCATTTGATTTGTAGATCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTATGAGACGCATTTTCAGGCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: HLSLSHLICRSVFWL*GLELWYETHFQALW
Trigger: CCACAGAGCCTGAAAATGCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGATCTACAAATCAAATGACTTAGAGAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGAGAGTGACTATAGACTaGTTCTGTATTGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITRVTID*FCIGFI
Trigger: GATGAACCCAATACAGAACAAGTCTATAGTCACTCT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTTCCTTCATTTTCCTTaGAAGGCTCAATTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITFLHFP*KAQLRV
Trigger: CACTCTCAATTGAGCCTTCAAAGGAAAATGAAGGAA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGTCTGTGTTACAATGTTaGTCCTTCTGGATGAGATCT +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITSVLQC*SFWMRS
Trigger: AGATCTCATCCAGAAGGACAAACATTGTAACACAGA...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGAATTCAGAAGAAAGTaGATGGGACATCTCACAGCT +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHEFRRK*MGHLTA
Trigger: AGCTGTGAGATGTCCCATCAACTTTCTTCTGAATTC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATATCACACTGGCTGATTaGAGATTCCAAACCACTACA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHITLAD*RFQTTT
Trigger: TGTAGTGGTTTGGAATCTCAAATCAGCCAGTGTGAT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATATCACACTGGCTGATTaGAGATTCCAAACCACTACA +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHITLAD*RFQTTT
Trigger: TGTAGTGGTTTGGAATCTCAAATCAGCCAGTGTGAT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITMSSRL*EGNFLA
Trigger: TGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACAT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAATGCTGGCACGGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGTCATCGCTCTCATCTaGAAGAAATGCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHVIALI*KKCWHG
Trigger: TCCGTGCCAGCATTTCTTCAAGATGAGAGCGATGAC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACGAGTGTCTTCTTCTaGCCCATTTTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITTSVFF*PILPLS
Trigger: AGACAAAGGCAAAATGGGCAAGAAGAAGACACTCGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTACCGCAATATCTCGTaGTATACAGGATTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHYRNIS*YTGFKV
Trigger: GACCTTGAATCCTGTATACAACGAGATATTGCGGTA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTACCGCAATATCTCGTaGTATACAGGATTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIYRNIS*YTGFKV
Trigger: GACCTTGAATCCTGTATACAACGAGATATTGCGGTA...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSCLFC*LSQSHV
Trigger: AACGTGGGATTGGGACAGCAAACAGAACAAACAGCT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTACACCATGGTATGGTaGAAGACGGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHYTMVW*KTGLVV
Trigger: AACCACCAACCCCGTCTTCAACCATACCATGGTGTA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFASTQV*GEFTIF
Trigger: GAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATGGAAGGACAGCATCTTaGTTAACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHGRTAS*LTLFTQ
Trigger: CTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCC...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATGGAAGGACAGCATCTTaGTTAACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHGRTAS*LTLFTQ
Trigger: CTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCC...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCCAGCTTTTCCAGTTTTaGACTGCTCGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITQLFQF*TARVWF
Trigger: AAACCAAACCCGAGCAGTCAAAAACTGGAAAAGCTG...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTCTGGCTTTGGGGATaGGAGCTTTGGTATGAGACG +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHFWLWG*ELWYET
Trigger: CGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAAGGGATCTCATCTCTaGGAGCAGACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHKGSHL*EQTQKT
Trigger: TGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCTT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTGAGTCTGTTTGCTGTTaGAGATCTATTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIESVCC*RSIPWR
Trigger: TCTCCAAGGAATAGATCTCAAACAGCAAACAGACTC...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCTTCCAGACAGGTATaGTCTGTCATCAAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSSRQV*SVIKAL
Trigger: CAACGCCTTGATGACAGACAATACCTGTCTGGAAGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTGGGCATTGGGACTTTaGAGTCGTCTTCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHWALGL*SRLLPD
Trigger: GTCTGGAAGAAGACGACTCAAAAGTCCCAATGCCCA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGCTCCCCTTACTTTTTaGAGGCAGATGGAATTCGGT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFAPLTF*RQMEFG
Trigger: ACCGAATTCCATCTGCCTCAAAAAAGTAAGGGGAGC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATTTCCTTCATTTTCCTTaGAAGGCTCAATTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHFLHFP*KAQLRV
Trigger: CACTCTCAATTGAGCCTTCAAAGGAAAATGAAGGAA...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTACTTCTTCCTCATCCTaGGCAAAACTTTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASITSSSS*AKLFPF
Trigger: AAATGGGAAAAGTTTTGCCAAGGATGAGGAAGAAGT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACCTCAAACCCACTTTaGTTATCCTGGACATCTATC +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITTSNPL*LSWTSI
Trigger: GATAGATGTCCAGGATAACAAAAGTGGGTTTGAGGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHMSSRL*EGNFLA
Trigger: TGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACAT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGTTTCCTCATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: SFLIALPKTFLLRSPASIMSSRL*EGNFLA
Trigger: TGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACAT...AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTGGTGTGGAAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAAATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: LVWKQQFSFPSLFNSLLEMSSRL*EGNFLA
Trigger: TGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACAT...TTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTTCCACACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFFFLPI*PLSGSR
Trigger: TCTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTACGAGTGTCTTCTTCTaGCCCATTTTGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFTSVFF*PILPLS
Trigger: AGACAAAGGCAAAATGGGCAAGAAGAAGACACTCGT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTT +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSCLFC*LSQSHV
Trigger: AACGTGGGATTGGGACAGCAAACAGAACAAACAGCT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGGAAGGACAGCATCTTaGTTAACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITGRTAS*LTLFTQ
Trigger: CTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATCACGACAACTCACCCTCTTTaGAAATCTGAAATAAACCAG +
Preference number: 5 (lower is better)
Translates to: NSSVFLACSTLSLNVGITTTHPL*KSEINQ
Trigger: CTGGTTTATTTCAGATTTCAAAAGAGGGTGAGTTGT...CGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCGAGTCTGTTTGCTGTTaGAGATCTATTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITESVCC*RSIPWR
Trigger: TCTCCAAGGAATAGATCTCAAACAGCAAACAGACTC...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp TTGTATAGTTCCATTGGTCTCTATTTTATGGTCTTCATGAAGTTGTaGGCATTCAGGGACCTCAAACCCACTTTTGTTATCCTGGACATC +
Preference number: 5 (lower is better)
Translates to: LYSSIGLYFMVFMKL*AFRDLKPTFVILDI
Trigger: GATGTCCAGGATAACAAAAGTGGGTTTGAGGTCCCTGAATGCTCACAACTTCATGAAGACCATAAAATAGAGACCAATGGAACTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACTTCTTCCTCATCCTaGGCAAAACTTTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITTSSSS*AKLFPF
Trigger: AAATGGGAAAAGTTTTGCCAAGGATGAGGAAGAAGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTCAGTTGCTGCTGGTTaGGAAGGAAGAACAACTTTC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHSVAAG*EGRTTF
Trigger: GAAAGTTGTTCTTCCTTCCAAACCAGCAGCAACTGA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATCAGCATTTACATCAGTaGCTGCTGGTTTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHQHLHQ*LLVWKE
Trigger: TTCCTTCCAAACCAGCAGCAACTGATGTAAATGCTG...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTGAATTCAGAAGAAAGTaGATGGGACATCTCACAGCT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFEFRRK*MGHLTA
Trigger: AGCTGTGAGATGTCCCATCAACTTTCTTCTGAATTC...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTACCGCAATATCTCGTaGTATACAGGATTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFYRNIS*YTGFKV
Trigger: GACCTTGAATCCTGTATACAACGAGATATTGCGGTA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATTTTTCCCTACAGCTCTaGTCTTCTGGCGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHFSLQL*SSGDFF
Trigger: GAAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AAGCAACAGTTCAGTTTTCCTAGCTTGTTCAACTCTCTCCTTGAATGTCGGCATACAACTCACCCTCTTTaGAAATCTGAAATAAACCAG +
Preference number: 5 (lower is better)
Translates to: KQQFSFPSLFNSLLECRHTTHPL*KSEINQ
Trigger: CTGGTTTATTTCAGATTTCAAAAGAGGGTGAGTTGT...ATGCCGACATTCAAGGAGAGAGTTGAACAAGCTAGGAAAACTGAACTGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp CGTACATCTTGTCATCGTTTAACTCCCTTGAGTCGTGCAACCAAAGAAATGCATACAACTCACCCTCTTTaGAAATCTGAAATAAACCAG +
Preference number: 5 (lower is better)
Translates to: RTSCHRLTPLSRATKEMHTTHPL*KSEINQ
Trigger: CTGGTTTATTTCAGATTTCAAAAGAGGGTGAGTTGT...ATGCATTTCTTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAGGAGGGAAGTCTTCTaGGTTTTGCTTTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHRREVF*VLLFLS
Trigger: AGAGAGGAAAAGCAAAACCAAGAAGACTTCCCTCCT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATAACTTAGCACCAGCTTaGCCTCCTTCCCAAAAAGAT +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHNLAPA*PPSQKD
Trigger: ATCTTTTTGGGAAGGAGGCAAAGCTGGTGCTAAGTT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp ATTCCTGGTATACATTCATTTGTATCTGGTTCTTGGTCGGCTTTTTaGTCATCTTCAGCACTACGCACTAATTCTTCAGGCAGATTATCT +
Preference number: 5 (lower is better)
Translates to: IPGIHSFVSGSWSAF*SSSALRTNSSGRLS
Trigger: AGATAATCTGCCTGAAGAATTAGTGCGTAGTGCTGAAGATGATCAAAAAGCCGACCAAGAACCAGATACAAATGAATGTATACCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTTCTGTGTTACAATGTTaGTCCTTCTGGATGAGATCT +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFSVLQC*SFWMRS
Trigger: AGATCTCATCCAGAAGGACAAACATTGTAACACAGA...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATATCACACTGGCTGATTaGAGATTCCAAACCACTACA +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHITLAD*RFQTTT
Trigger: TGTAGTGGTTTGGAATCTCAAATCAGCCAGTGTGAT...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp ATTGCTTTGCCCAAAACCTTCTTACTTAGAAGCCCAGCAAGCATTTCAATAACCACCTTTTCTCTGCCTTaGTCCTCTACAAATTGTATA +
Preference number: 5 (lower is better)
Translates to: IALPKTFLLRSPASISITTFSLP*SSTNCI
Trigger: TATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGT...GGTTATTGAAATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFMSSRL*EGNFLA
Trigger: TGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACAT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS TCA 90 bp TTTAAGAAGTTTCTCAAGACCAACATCAAAACTACTCTCAGTTACTaGTGGAGCCTCAGCCTTCTCTACAGTTTCTTGTATTTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: FKKFLKTNIKTTLSY*WSLSLLYSFLYFCK
Trigger: CTTACAGAAATACAAGAAACTGTAGAGAAGGCTGAGGCTCCATCAGTAACTGAGAGTAGTTTTGATGTTGGTCTTGAGAAACTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 90 bp TCTACAAATTGTATAGTTCCATTGGTCTCTATTTTATGGTCTTCATaGAGTTGTGAGCATTCAGGGACCTCAAACCCACTTTTGTTATCC +
Preference number: 5 (lower is better)
Translates to: STNCIVPLVSILWSS*SCEHSGTSNPLLLS
Trigger: GGATAACAAAAGTGGGTTTGAGGTCCCTGAATGCTCACAACTTCATGAAGACCATAAAATAGAGACCAATGGAACTATACAATTTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 90 bp TTAAAGTTTAATTTCTCCATCTCTTCTGCAGCTATAACATTTCCCTaGCTTAAGTGTCTTCCTTCTTCTACTTCCTGGGTCTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LKFNFSISSAAITFP*LKCLPSSTSWVFSL
Trigger: AAGAGAAAAGACCCAGGAAGTAGAAGAAGGAAGACACTTAAGGCAGGGAAATGTTATAGCTGCAGAAGAGATGGAGAAATTAAACTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp AGGAAACATGTGAAGCTAGCTTTTTCTTTGGTGTGGAAGCAACAGTTCAGTTTTACCTTTTCTCTGCCTTaGTCCTCTACAAATTGTATA +
Preference number: 5 (lower is better)
Translates to: RKHVKLAFSLVWKQQFSFTFSLP*SSTNCI
Trigger: TATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGT...AAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATGTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 90 bp GTCTTTTCTCTTGATAATTTCATGGCGTTAAACTCCTTGGATTTCTaGATGTTCAGTGGCACAGAAGTTTGTTTGTTTGTTGCTGTATTA +
Preference number: 5 (lower is better)
Translates to: VFSLDNFMALNSLDF*MFSGTEVCLFVAVL
Trigger: TAATACAGCAACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTTTAACGCCATGAAATTATCAAGAGAAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS-3UTR CAA 90 bp TTTATGAGCAGTGAAGTCAGTCTTACTGCCCTAACATGGAATTCAATGTTTCATGGCACAGAAGTTTGTTaGTTTGTTGCTGTATTATTC +
Preference number: 5 (lower is better)
Translates to: FMSSEVSLTALTWNSMFHGTEVC*FVAVLF
Trigger: GAATAATACAGCAACAAACAAACAAACTTCTGTGCC...ATGAAACATTGAATTCCATGTTAGGGCAGTAAGACTGACTTCACTGCTCATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp CGGAGGGTCTCTGAGTCCGTGCTGCTGGAACTGGAGTaGCGCTTTAGGATCCCTCTTGGAGCCCCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: RRVSESVLLELE*RFRIPLGAPLA
Trigger: TGCGAGAGGGGCTCCAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 72 bp GGAGGGTCTCTGAGTCCGTGCTGCTGGAACTGGAGTTaGGCTTTAGGATCCCTCTTGGAGCCCCTCTCGCAT +
Preference number: 6 (lower is better)
Translates to: GGSLSPCCWNWS*ALGSLLEPLSH
Trigger: ATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAGAGACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 90 bp CTGAGTCCGTGCTGCTGGAACTGGAGTTGCGCTTTAGGATCCCTCTaGGAGCCCCTCTCGCATTCAGGGAGTCCCTCCGTTGTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: LSPCCWNWSCALGSL*EPLSHSGSPSVVWE
Trigger: TTCCCAGACAACGGAGGGACTCCCTGAATGCGAGAGGGGCTCCAAGAGGGATCCTAAAGCGCAACTCCAGTTCCAGCAGCACGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS TCA 72 bp ACAGGGTCTGGAGCAGGCCATAGGGGACTCACTCTCTaGGGACATGAGGGTGTACCTGCTGTCTGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: TGSGAGHRGLTL*GHEGVPAVCSL
Trigger: AAGAGAGCAGACAGCAGGTACACCCTCATGTCCTCAGAGAGTGAGTCCCCTATGGCCTGCTCCAGACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp ACTGGAACTTGGGCCTGCGGGATCTGTGTCATCTTCTaGCTCTTCCACAACAGCTATCTCTGCCGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: TGTWACGICVIF*LFHNSYLCRWE
Trigger: CTCCCAGCGGCAGAGATAGCTGTTGTGGAAGAGCCAGAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
CDS CAA 90 bp GCTGTCTTCCTCTTCAGTGGGTACCACTTCAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTTTCCAGGTCGAGCTCCACCTCCCCC +
Preference number: 6 (lower is better)
Translates to: AVFLFSGYHFSCLFC*LSQSHVSRSSSTSP
Trigger: GGGGGAGGTGGAGCTCGACCTGGAAACGTGGGATTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTACCCACTGAAGAGGAAGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CAA 72 bp AGCATCCGGAGGGGCAGCGTCGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTCTCCCAGAGAGCAACT +
Preference number: 6 (lower is better)
Translates to: SIRRGSVASTQV*GEFTIFSQRAT
Trigger: AGTTGCTCTCTGGGAGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGCGACGCTGCCCCTCCGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CAA 90 bp GGAGTGATCTTCCGGCAGCTTGGGGCTGTTGAATGGATTCTTCCTTaGCTTGGGCAGAGACACAGCTGGAGTCCTCGTACTTTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GVIFRQLGAVEWILP*LGQRHSWSPRTFLG
Trigger: TCCCAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCCGGAAGATCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 72 bp CTCAGCTGCCGCTGGGAGCTTCTTCCTTCTCATGGATaGTCTGATGATGTCAGCACCGTGGATTTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: LSCRWELLPSHG*SDDVSTVDFVP
Trigger: AGGGACAAAATCCACGGTGCTGACATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp CAAGGAGTGATCTTCCGGCAGCTTGGGGCTGTTGAATaGATTCTTCCTTTGCTTGGGCAGAGACACAGCTGG +
Preference number: 6 (lower is better)
Translates to: QGVIFRQLGAVE*ILPLLGQRHSW
Trigger: CCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCCGGAAGATCACTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp TCCCACTTCCTGGCCAAGGACGGGTCTAGGACTTTGTaGAAGCTCATTCTTCACGGCAGAGAATCTCACGTG +
Preference number: 6 (lower is better)
Translates to: SHFLAKDGSRTL*KLILHGRESHV
Trigger: CACGTGAGATTCTCTGCCGTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTCCTTGGCCAGGAAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp AGAAGGGGCTTACCTTGCCGATGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGCTCAGGCTCACCACAC +
Preference number: 6 (lower is better)
Translates to: RRGLPCRWSLKL*SAVCDGSGSPH
Trigger: GTGTGGTGAGCCTGAGCCATCACAGACAGCAGACCACAGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp GCAGTGAGAGCCTTGAGAAGGGGCTTACCTTGCCGATaGTCTCTAAAACTGTGGTCTGCTGTCTGTGATGGC +
Preference number: 6 (lower is better)
Translates to: AVRALRRGLPCR*SLKLWSAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCTCAAGGCTCTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp GGAAGGGTCCCCACTCCTTCTGTACTCTCCAAACCTTaGCTACCACCCTTGTTTTCATTCCTGCGACTTGGG +
Preference number: 6 (lower is better)
Translates to: GRVPTPSVLSKP*LPPLFSFLRLG
Trigger: CCCAAGTCGCAGGAATGAAAACAAGGGTGGTAGCCAAGGTTTGGAGAGTACAGAAGGAGTGGGGACCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp TTCCGGCAGCTTGGGGCTGTTGAATGGATTCTTCCTTaGCTTGGGCAGAGACACAGCTGGAGTCCTCGTACT +
Preference number: 6 (lower is better)
Translates to: FRQLGAVEWILP*LGQRHSWSPRT
Trigger: AGTACGAGGACTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 90 bp GCAACTGGTGCTGTCTTCCTCTTCAGTGGGTACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAATCCCACGTTTCCAGGTCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: ATGAVFLFSGYHFSC*FCLLSQSHVSRSSS
Trigger: GGAGCTCGACCTGGAAACGTGGGATTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTACCCACTGAAGAGGAAGACAGCACCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CAA 90 bp GCAATCAGAAGCATCCGGAGGGGCAGCGTCGCTTCAACCCAAGTGTaGGGAGAGTTTACCATCTTCTCCCAGAGAGCAACTTCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: AIRSIRRGSVASTQV*GEFTIFSQRATSSE
Trigger: TTCTGAGGAAGTTGCTCTCTGGGAGAAGATGGTAAACTCTCCCAACACTTGGGTTGAAGCGACGCTGCCCCTCCGGATGCTTCTGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS TCA 72 bp GTTGCAAGGAGTGATCTTCCGGCAGCTTGGGGCTGTTaGATGGATTCTTCCTTTGCTTGGGCAGAGACACAG +
Preference number: 6 (lower is better)
Translates to: VARSDLPAAWGC*MDSSFAWAETQ
Trigger: CTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTCAACAGCCCCAAGCTGCCGGAAGATCACTCCTTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS TCA 72 bp ATCTCTGTAGCACATGGACCCACATGTGAGGATGTCTaGGCAGTGAGAGCCTTGAGAAGGGGCTTACCTTGC +
Preference number: 6 (lower is better)
Translates to: ISVAHGPTCEDV*AVRALRRGLPC
Trigger: GCAAGGTAAGCCCCTTCTCAAGGCTCTCACTGCTCAGACATCCTCACATGTGGGTCCATGTGCTACAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp CTTTGCCCTCATTGCTGTGTCCTTATTCTGCTCAGCTaGCGCTGGGAGCTTCTTCCTTCTCATGGATGCTCT +
Preference number: 6 (lower is better)
Translates to: LCPHCCVLILLS*RWELLPSHGCS
Trigger: AGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGCAATGAGGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp CGTACTTTCCTGGGACATATCAATCACACTGGAAGCTaGATCCACCAAACTGGAACTTGGGCCTGCGGGATC +
Preference number: 6 (lower is better)
Translates to: RTFLGHINHTGS*IHQTGTWACGI
Trigger: GATCCCGCAGGCCCAAGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAGTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp TTGGGCAGAGACACAGCTGGAGTCCTCGTACTTTCCTaGGACATATCAATCACACTGGAAGCTGGATCCACC +
Preference number: 6 (lower is better)
Translates to: LGRDTAGVLVLS*DISITLEAGST
Trigger: GGTGGATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 72 bp GAGGGTGTACCTGCTGTCTGCTCTCTTTCAGGGAGCTaGGCGTCCACTTCTCCAGCTTCTCTAAGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: EGVPAVCSLSGS*ASTSPASLSSF
Trigger: AAAGCTACTTAGAGAAGCTGGAGAAGTGGACGCCAAGCTCCCTGAAAGAGAGCAGACAGCAGGTACACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp CTCTTCAGTGGGTACCACTTCAGCTGTTTGTTCTGTTaGCTGTCCCAATCCCACGTTTCCAGGTCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LFSGYHFSCLFC*LSQSHVSRSSS
Trigger: GGAGCTCGACCTGGAAACGTGGGATTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTACCCACTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CAA 72 bp TTCTCCCACTTCCTGGCCAAGGACGGGTCTAGGACTTaGTGGAAGCTCATTCTTCACGGCAGAGAATCTCAC +
Preference number: 6 (lower is better)
Translates to: FSHFLAKDGSRT*WKLILHGRESH
Trigger: GTGAGATTCTCTGCCGTGAAGAATGAGCTTCCACAAAGTCCTAGACCCGTCCTTGGCCAGGAAGTGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 72 bp TGTCTGAGCAGTGAGAGCCTTGAGAAGGGGCTTACCTaGCCGATGGTCTCTAAAACTGTGGTCTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: CLSSESLEKGLT*PMVSKTVVCCL
Trigger: CAGACAGCAGACCACAGTTTTAGAGACCATCGGCAAGGTAAGCCCCTTCTCAAGGCTCTCACTGCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp TTTCTCTCTCAGCACTTGGTTCTTGGGGTCCTCACTGGCTTCTTTTaGGTCCTCAGGCTTCTTCCAAGAAGATCCATTGTCGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: FLSQHLVLGVLTGFF*VLRLLPRRSIVGSP
Trigger: GGGGCTGCCGACAATGGATCTTCTTGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp CCAGCTTTGCCTCCTTCCCAAAAAGATATTCGGTCGCTCACTCGCTaGTATTTCTCTCTCAGCACTTGGTTCTTGGGGTCCTCACTGGCT +
Preference number: 6 (lower is better)
Translates to: PALPPSQKDIRSLTR*YFSLSTWFLGSSLA
Trigger: AGCCAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAATACAAGCGAGTGAGCGACCGAATATCTTTTTGGGAAGGAGGCAAAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp TGGTCTGCTGTCTGTGATGGCTCAGGCTCACCACACTaGGTCAGTTCATCGGAAGGGCTTTTGGACAATTCT +
Preference number: 6 (lower is better)
Translates to: WSAVCDGSGSPH*VSSSEGLLDNS
Trigger: AGAATTGTCCAAAAGCCCTTCCGATGAACTGACTCAGTGTGGTGAGCCTGAGCCATCACAGACAGCAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS TCA 72 bp TTCAGGATGGTTAGTGTTCCATGGGACTTGGGCTTCTaGATCAGACCTTTTCAGAGCCCTGAGCAGGTCGTC +
Preference number: 6 (lower is better)
Translates to: FRMVSVPWDLGF*IRPFQSPEQVV
Trigger: GACGACCTGCTCAGGGCTCTGAAAAGGTCTGATTCAGAAGCCCAAGTCCCATGGAACACTAACCATCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp TGGGGTATTTCCCCCATGAACCCTGCTTGCTCTACTTaGGAAGGCTGCTTCTCTAAAGTGTCTCTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: WGISPMNPACST*EGCFSKVSLLP
Trigger: AGGGAGAAGAGACACTTTAGAGAAGCAGCCTTCGCAAGTAGAGCAAGCAGGGTTCATGGGGGAAATACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp CATTTCACCTCTGTTTTCTGTCTCGAGGGCAACTGGTaGTGTCTTCCTCTTCAGTGGGTACCACTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: HFTSVFCLEGNW*CLPLQWVPLQL
Trigger: CAGCTGAAGTGGTACCCACTGAAGAGGAAGACAGCACCAGTTGCCCTCGAGACAGAAAACAGAGGTGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 72 bp GTTAACATTATTCACCCAGCTCTCCTTTGCCCTCATTaGTGTGTCCTTATTCTGCTCAGCTGCCGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: VNIIHPALLCPH*CVLILLSCRWE
Trigger: CTCCCAGCGGCAGCTGAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGAATAATGTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 72 bp TATCTCTGCCGCTGGGAGCTTCTTCCTTCTCATGGATaGTCTGATGATGTCAGCACCGTGGATTTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: YLCRWELLPSHG*SDDVSTVDFVP
Trigger: AGGGACAAAATCCACGGTGCTGACATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
CDS CCA 72 bp GGAAACTCCATCAAAACAATGGGGAAGCTGAGCCAATaGAGGAGAGCCTTCTGCAGCCAACTGAAGCATAGC +
Preference number: 6 (lower is better)
Translates to: GNSIKTMGKLSQ*RRAFCSQLKHS
Trigger: GCTATGCTTCAGTTGGCTGCAGAAGGCTCTCCTCCATTGGCTCAGCTTCCCCATTGTTTTGATGGAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp AACAGTGGGAGGTCAAGGCATTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGAAGCTTTTTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: NSGRSRHSFTQM*TSPVVGSFLPG
Trigger: CCCTGGCAAAAAGCTTCCTACAACTGGAGAAGTCCACATCTGGGTGAAGGAATGCCTTGACCTCCCACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 72 bp GAGTCCTCGTACTTTCCTGGGACATATCAATCACACTaGAAGCTGGATCCACCAAACTGGAACTTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: ESSYFPGTYQSH*KLDPPNWNLGL
Trigger: CAGGCCCAAGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAGTACGAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp TCTTCTTCTGAACCTTGCCGATGGTCTCTAAAACTGTaGTCTGCTGTCTGTGATGGCTCAGGCTCACCACAC +
Preference number: 6 (lower is better)
Translates to: SSSEPCRWSLKL*SAVCDGSGSPH
Trigger: GTGTGGTGAGCCTGAGCCATCACAGACAGCAGACCACAGTTTTAGAGACCATCGGCAAGGTTCAGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
CDS CAA 72 bp GAGGACAAGGACGTCATGCCAGAGGAGCTGCTAAGATaGGTTAATGAGCTGGGGCTCTTCTTGTATCTCCTG +
Preference number: 6 (lower is better)
Translates to: EDKDVMPEELLR*VNELGLFLYLL
Trigger: CAGGAGATACAAGAAGAGCCCCAGCTCATTAACCAATCTTAGCAGCTCCTCTGGCATGACGTCCTTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CAA 72 bp GCTGTCTTCCTCTTCAGTGGGTACCACTTCAGCTGTTaGTTCTGTTTGCTGTCCCAATCCCACGTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: AVFLFSGYHFSC*FCLLSQSHVSR
Trigger: CCTGGAAACGTGGGATTGGGACAGCAAACAGAACAAACAGCTGAAGTGGTACCCACTGAAGAGGAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CAA 72 bp TCGGTCGCTCACTCGCTTGTATTTCTCTCTCAGCACTaGGTTCTTGGGGTCCTCACTGGCTTCTTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: SVAHSLVFLSQH*VLGVLTGFFLV
Trigger: GACCAAAAAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAATACAAGCGAGTGAGCGACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp GCTCTTCTTGTATCTCCTGAGCTGGTAGCTGCTCTCTaGTGCTGTGTCTGTTTCTCTGTCATCGCTCTCATC +
Preference number: 6 (lower is better)
Translates to: ALLVSPELVAAL*CCVCFSVIALI
Trigger: GATGAGAGCGATGACAGAGAAACAGACACAGCATCAGAGAGCAGCTACCAGCTCAGGAGATACAAGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 72 bp TGTGGAAGCTCATTCTTCACGGCAGAGAATCTCACGTaGTTTAACGGCTCTAGTGAGCTTGTGGAAGAGTCG +
Preference number: 6 (lower is better)
Translates to: CGSSFFTAENLT*FNGSSELVEES
Trigger: CGACTCTTCCACAAGCTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGCCGTGAAGAATGAGCTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 72 bp GCTCATCACACTGCCACTCGCCTCATCTTGAAGAAATaGTGGCACGGACTTGCTCATCCTTTTGAGTTTGTC +
Preference number: 6 (lower is better)
Translates to: AHHTATRLILKK*WHGLAHPFEFV
Trigger: GACAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATTTCTTCAAGATGAGGCGAGTGGCAGTGTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107210.3
ENSMUST00000190365.8
CDS CCA 72 bp TCTTCAGGGCAGCATCCCTCTGCAGAACCTTTAAGATaGCGTCTTGCTCCTCCTCTGTCAGGAAACTTAAGT +
Preference number: 6 (lower is better)
Translates to: SSGQHPSAEPLR*RLAPPLSGNLS
Trigger: ACTTAAGTTTCCTGACAGAGGAGGAGCAAGACGCCATCTTAAAGGTTCTGCAGAGGGATGCTGCCCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp ACATATCAATCACACTGGAAGCTGGATCCACCAAACTaGAACTTGGGCCTGCGGGATCTGTGTCATCTTCTG +
Preference number: 6 (lower is better)
Translates to: TYQSHWKLDPPN*NLGLRDLCHLL
Trigger: CAGAAGATGACACAGATCCCGCAGGCCCAAGTTCCAGTTTGGTGGATCCAGCTTCCAGTGTGATTGATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp GAGCCCCTCTCGCATTCAGGGAGTCCCTCCGTTGTCTaGGAAAAGACTGGTTATCATCTTTCTCTAAGTCAT +
Preference number: 6 (lower is better)
Translates to: EPLSHSGSPSVV*EKTGYHLSLSH
Trigger: ATGACTTAGAGAAAGATGATAACCAGTCTTTTCCCAGACAACGGAGGGACTCCCTGAATGCGAGAGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp AAAACAGGGCTGTGCTCTTCTTCTGAACCTTGCCGATaGTCTCTAAAACTGTGGTCTGCTGTCTGTGATGGC +
Preference number: 6 (lower is better)
Translates to: KTGLCSSSEPCR*SLKLWSAVCDG
Trigger: GCCATCACAGACAGCAGACCACAGTTTTAGAGACCATCGGCAAGGTTCAGAAGAAGAGCACAGCCCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
CDS CCA 72 bp CCTAAGCTTTCAGGATGGTTAGTGTTCCATGGGACTTaGGCTTCTGAATCAGACCTTTTCAGAGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: PKLSGWLVFHGT*ASESDLFRALS
Trigger: GCTCAGGGCTCTGAAAAGGTCTGATTCAGAAGCCCAAGTCCCATGGAACACTAACCATCCTGAAAGCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp ATCTTCTGGCTCTTCCACAACAGCTATCTCTGCCGCTaGGAGCTTCTTCCTTCTCATGGATGCTCTGATGAT +
Preference number: 6 (lower is better)
Translates to: IFWLFHNSYLCR*ELLPSHGCSDD
Trigger: ATCATCAGAGCATCCATGAGAAGGAAGAAGCTCCCAGCGGCAGAGATAGCTGTTGTGGAAGAGCCAGAAGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190837.7
CDS CAA 72 bp CAGCACTTGGTTCTTGGGGTCCTCACTGGCTTCTTTTaGGTCCTCAGGCTTCTTCCAAGAAGATCCATTGTC +
Preference number: 6 (lower is better)
Translates to: QHLVLGVLTGFF*VLRLLPRRSIV
Trigger: GACAATGGATCTTCTTGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp CCTCCTTCCCAAAAAGATATTCGGTCGCTCACTCGCTaGTATTTCTCTCTCAGCACTTGGTTCTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: PPSQKDIRSLTR*YFSLSTWFLGS
Trigger: GGACCCCAAGAACCAAGTGCTGAGAGAGAAATACAAGCGAGTGAGCGACCGAATATCTTTTTGGGAAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp GATTGGTTAATGAGCTGGGGCTCTTCTTGTATCTCCTaGGCTGGTAGCTGCTCTCTGATGCTGTGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: DWLMSWGSSCIS*AGSCSLMLCLF
Trigger: AAACAGACACAGCATCAGAGAGCAGCTACCAGCTCAGGAGATACAAGAAGAGCCCCAGCTCATTAACCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107211.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS TCA 72 bp GAGTTTGTCAGGGTGGGAAAACTGATTATCAGGCAGTaGAGGCACTGTGGAAACATCTTCAGCACTACGCAC +
Preference number: 6 (lower is better)
Translates to: EFVRVGKLIIRQ*RHCGNIFSTTH
Trigger: GTGCGTAGTGCTGAAGATGTTTCCACAGTGCCTTCACTGCCTGATAATCAGTTTTCCCACCCTGACAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107211.8
ENSMUST00000190365.8
CDS GCA 72 bp TCCCCCAGAAAGCTGTTGCGCTTAAATGTATCCCGATaGCAAACGGACAGGTTCAACTTCTGCGTCTTTAAG +
Preference number: 6 (lower is better)
Translates to: SPRKLLRLNVSR*QTDRFNFCVFK
Trigger: CTTAAAGACGCAGAAGTTGAACCTGTCCGTTTGGCATCGGGATACATTTAAGCGCAACAGCTTTCTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 72 bp GAATGGATTCTTCCTTTGCTTGGGCAGAGACACAGCTaGAGTCCTCGTACTTTCCTGGGACATATCAATCAC +
Preference number: 6 (lower is better)
Translates to: EWILPLLGQRHS*SPRTFLGHINH
Trigger: GTGATTGATATGTCCCAGGAAAGTACGAGGACTCCAGCTGTGTCTCTGCCCAAGCAAAGGAAGAATCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp ATTTCTCTCTCAGCACTTGGTTCTTGGGGTCCTCACTaGCTTCTTTTTGGTCCTCAGGCTTCTTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: ISLSALGSWGPH*LLFGPQASSKK
Trigger: CTTCTTGGAAGAAGCCTGAGGACCAAAAAGAAGCCAGTGAGGACCCCAAGAACCAAGTGCTGAGAGAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp GAGATGGGGTGCTTGGCCATCCTCATCAAAGACCACTaGTTTAGCTGTGACTTCACTATAGTCACTTTGACC +
Preference number: 6 (lower is better)
Translates to: EMGCLAILIKDH*FSCDFTIVTLT
Trigger: GGTCAAAGTGACTATAGTGAAGTCACAGCTAAACCAGTGGTCTTTGATGAGGATGGCCAAGCACCCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp CTTGCTGTTCATGAACTTCCTTGCCAGAAGTCTGGCTaGCTGGTAATGTGGCTTCTGCCAGCAACTTCTGTA +
Preference number: 6 (lower is better)
Translates to: LAVHELPCQKSG*LVMWLLPATSV
Trigger: TACAGAAGTTGCTGGCAGAAGCCACATTACCAGCAAGCCAGACTTCTGGCAAGGAAGTTCATGAACAGCAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp ATTCCTGCGACTTGGGATTCTGTAGGTTTCAAATCGTaGCAGTGTATCTGGACCTTCCTTGTGGGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: IPATWDSVGFKS*QCIWTFLVGAL
Trigger: CAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGATTTGAAACCTACAGAATCCCAAGTCGCAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp CTGCAAGAAGATGTGAGCTGTGATGCCTTTAACTTAGCACCAGCTTaGCCTCCTTCCCAAAAAGATATTCGGTCGCTCACTCGCTTGTAT +
Preference number: 6 (lower is better)
Translates to: LQEDVSCDAFNLAPA*PPSQKDIRSLTRLY
Trigger: ATACAAGCGAGTGAGCGACCGAATATCTTTTTGGGAAGGAGGCAAAGCTGGTGCTAAGTTAAAGGCATCACAGCTCACATCTTCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp GGACACACTCATTTCTTTAGGAGCTTCTTCAAAGCCTaGTTCCTGGGAAGCCTGTGTTTCTCCTGTAATGAC +
Preference number: 6 (lower is better)
Translates to: GHTHFFRSFFKA*FLGSLCFSCND
Trigger: GTCATTACAGGAGAAACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCTCCTAAAGAAATGAGTGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp ATAAACCAGCTTTTCCAGTTTTTGACTGCTCGGGTTTaGTTTGTTGCAAGGAGTGATCTTCCGGCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: INQLFQFLTARV*FVARSDLPAAW
Trigger: CCAAGCTGCCGGAAGATCACTCCTTGCAACAAACCAAACCCGAGCAGTCAAAAACTGGAAAAGCTGGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp TGGTCAGATTCTAAAACAGTAAATTCTCCCACTTCCTaGCCAAGGACGGGTCTAGGACTTTGTGGAAGCTCA +
Preference number: 6 (lower is better)
Translates to: WSDSKTVNSPTS*PRTGLGLCGSS
Trigger: TGAGCTTCCACAAAGTCCTAGACCCGTCCTTGGCCAGGAAGTGGGAGAATTTACTGTTTTAGAATCTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp CTGATAATGAGACAAAGGTGTTTTGTGGGAGAGCTCTaGGTGATTCTGAAACTCCTCTATGTCCCCTGCATC +
Preference number: 6 (lower is better)
Translates to: LIMRQRCFVGEL*VILKLLYVPCI
Trigger: GATGCAGGGGACATAGAGGAGTTTCAGAATCACCCAGAGCTCTCCCACAAAACACCTTTGTCTCATTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 72 bp TCCACAACAGCTATCTCTGGAGGAAGGACAGCATCTTaGTTAACATTATTCACCCAGCTCTCCTTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: STTAISGGRTAS*LTLFTQLSFAL
Trigger: GAGGGCAAAGGAGAGCTGGGTGAATAATGTTAACAAAGATGCTGTCCTTCCTCCAGAGATAGCTGTTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 72 bp TTGCAGTGTATCTGGACCTTCCTTGTGGGTGCCTTGTaGGGACAAATTCTCAGAGTTAGACTTGAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: LQCIWTFLVGAL*GQILRVRLEKC
Trigger: GCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp TCGTTGCAGTGTATCTGGACCTTCCTTGTGGGTGCCTaGTTGGGACAAATTCTCAGAGTTAGACTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: SLQCIWTFLVGA*LGQILRVRLEK
Trigger: CTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp GATGTGAGCTGTGATGCCTTTAACTTAGCACCAGCTTaGCCTCCTTCCCAAAAAGATATTCGGTCGCTCACT +
Preference number: 6 (lower is better)
Translates to: DVSCDAFNLAPA*PPSQKDIRSLT
Trigger: AGTGAGCGACCGAATATCTTTTTGGGAAGGAGGCAAAGCTGGTGCTAAGTTAAAGGCATCACAGCTCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp GGTTTCAAATCGTTGCAGTGTATCTGGACCTTCCTTGTGGGTGCCTaGTTGGGACAAATTCTCAGAGTTAGACTTGAGAAGTGCATCACT +
Preference number: 6 (lower is better)
Translates to: GFKSLQCIWTFLVGA*LGQILRVRLEKCIT
Trigger: AGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGATTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp CTTGAAGAAATGCTGGCACGGACTTGCTCATCCTTTTaGGTTTGTCAGGGTGGGAAAACTGATTATCAGGCA +
Preference number: 6 (lower is better)
Translates to: LEEMLARTCSSF*VCQGGKTDYQA
Trigger: TGCCTGATAATCAGTTTTCCCACCCTGACAAACTCAAAAGGATGAGCAAGTCCGTGCCAGCATTTCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS GCA 72 bp GTTACAATGTTTGTCCTTCTGGATGAGATCTGCACCTaGCAAAATTCCAACACCCTGTGGAAAAGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: VTMFVLLDEICT*QNSNTLWKRSC
Trigger: ACAGCTCCTTTTCCACAGGGTGTTGGAATTTTGGCAGGTGCAGATCTCATCCAGAAGGACAAACATTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp AGCATCTTTGTTAACATTATTCACCCAGCTCTCCTTTaGCCTCATTGCTGTGTCCTTATTCTGCTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SIFVNIIHPALL*PHCCVLILLSC
Trigger: GCAGCTGAGCAGAATAAGGACACAGCAATGAGGGCAAAGGAGAGCTGGGTGAATAATGTTAACAAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS GCA 72 bp TCTCCAAACCTTGGCTACCACCCTTGTTTTCATTCCTaGGACTTGGGATTCTGTAGGTTTCAAATCGTTGCA +
Preference number: 6 (lower is better)
Translates to: SPNLGYHPCFHS*DLGFCRFQIVA
Trigger: TGCAACGATTTGAAACCTACAGAATCCCAAGTCGCAGGAATGAAAACAAGGGTGGTAGCCAAGGTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp GTTTCAAATCGTTGCAGTGTATCTGGACCTTCCTTGTaGGTGCCTTGTTGGGACAAATTCTCAGAGTTAGAC +
Preference number: 6 (lower is better)
Translates to: VSNRCSVSGPSL*VPCWDKFSELD
Trigger: GTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGATTTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp TGGGATTCTGTAGGTTTCAAATCGTTGCAGTGTATCTaGACCTTCCTTGTGGGTGCCTTGTTGGGACAAATT +
Preference number: 6 (lower is better)
Translates to: WDSVGFKSLQCI*TFLVGALLGQI
Trigger: AATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGATTTGAAACCTACAGAATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp TTATTTGAGGAATCAAAACGTGAGAGATGGGGTGCTTaGCCATCCTCATCAAAGACCACTGGTTTAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LFEESKRERWGA*PSSSKTTGLAV
Trigger: CACAGCTAAACCAGTGGTCTTTGATGAGGATGGCCAAGCACCCCATCTCTCACGTTTTGATTCCTCAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp GTTTCAGGTTTATTTGAGGAATCAAAACGTGAGAGATaGGGTGCTTGGCCATCCTCATCAAAGACCACTGGT +
Preference number: 6 (lower is better)
Translates to: VSGLFEESKRER*GAWPSSSKTTG
Trigger: ACCAGTGGTCTTTGATGAGGATGGCCAAGCACCCCATCTCTCACGTTTTGATTCCTCAAATAAACCTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp TGGGTAGAATGTCTGAATGACAAGGGATCTCATCTCTaGGAGCAGACCCAGAAGACATCAGCTGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: WVECLNDKGSHL*EQTQKTSAVLF
Trigger: AAAGAGAACAGCTGATGTCTTCTGGGTCTGCTCCAAGAGATGAGATCCCTTGTCATTCAGACATTCTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 90 bp TCTTCACGGCAGAGAATCTCACGTGCTTTAACGGCTCTAGTGAGCTaGTGGAAGAGTCGTCTTCTAAAGAAAATTCCTTCTCAGAGATTC +
Preference number: 6 (lower is better)
Translates to: SSRQRISRALTALVS*WKSRLLKKIPSQRF
Trigger: GAATCTCTGAGAAGGAATTTTCTTTAGAAGACGACTCTTCCACAAGCTCACTAGAGCCGTTAAAGCACGTGAGATTCTCTGCCGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 90 bp GTCATCAAGGCGTTGCTAATCTGTGCTTTTGAGTCTGTTTGCTGTTaGAGATCTATTCCTTGGAGATGTTGGAGGGATGACATAGTGTCC +
Preference number: 6 (lower is better)
Translates to: VIKALLICAFESVCC*RSIPWRCWRDDIVS
Trigger: GGACACTATGTCATCCCTCCAACATCTCCAAGGAATAGATCTCAAACAGCAAACAGACTCAAAAGCACAGATTAGCAACGCCTTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp CCTTCCTTGTGGGTGCCTTGTTGGGACAAATTCTCAGAGTTAGACTaGAGAAGTGCATCACTATCTTGGCAAGTTACAGAAACCAGCATA +
Preference number: 6 (lower is better)
Translates to: PSLWVPCWDKFSELD*RSASLSWQVTETSI
Trigger: TATGCTGGTTTCTGTAACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp TTCAAATCGTTGCAGTGTATCTGGACCTTCCTTGTGGGTGCCTTGTaGGGACAAATTCTCAGAGTTAGACTTGAGAAGTGCATCACTATC +
Preference number: 6 (lower is better)
Translates to: FKSLQCIWTFLVGAL*GQILRVRLEKCITI
Trigger: GATAGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCACAAGGAAGGTCCAGATACACTGCAACGATTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp TTCTGTGTTACAATGTTTGTCCTTCTGGATGAGATCTaGACCTGCCAAAATTCCAACACCCTGTGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: FCVTMFVLLDEI*TCQNSNTLWKR
Trigger: CCTTTTCCACAGGGTGTTGGAATTTTGGCAGGTGCAGATCTCATCCAGAAGGACAAACATTGTAACACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp TCTGAAAACTCATATTCTGAGCATGCCTCTGGCCCTTaGTCTTCCTCTTGTCTCTTATATGGTGTTGCTAGT +
Preference number: 6 (lower is better)
Translates to: SENSYSEHASGP*SSSCLLYGVAS
Trigger: ACTAGCAACACCATATAAGAGACAAGAGGAAGAGCAAGGGCCAGAGGCATGCTCAGAATATGAGTTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp TTCTCTCGTGGATGGTTAGGCCAGGTGATAGGATTTTaGTTTTCGGATCAAGGTTGTAATTTAAACGGAGGG +
Preference number: 6 (lower is better)
Translates to: FSRGWLGQVIGF*FSDQGCNLNGG
Trigger: CCCTCCGTTTAAATTACAACCTTGATCCGAAAAGCAAAATCCTATCACCTGGCCTAACCATCCACGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp CTCATTTCTTTAGGAGCTTCTTCAAAGCCTGGTTCCTaGGAAGCCTGTGTTTCTCCTGTAATGACCTTTTCT +
Preference number: 6 (lower is better)
Translates to: LISLGASSKPGS*EACVSPVMTFS
Trigger: AGAAAAGGTCATTACAGGAGAAACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCTCCTAAAGAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp AAGACATCAGCTGTTCTCTTTCCCTTCCTGAATCGCTaGGGCTTGACACTAACTGATAATGAGACAAAGGTG +
Preference number: 6 (lower is better)
Translates to: KTSAVLFPFLNR*GLTLTDNETKV
Trigger: CACCTTTGTCTCATTATCAGTTAGTGTCAAGCCCAAGCGATTCAGGAAGGGAAAGAGAACAGCTGATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 90 bp CTTGCTGGTAATGTGGCTTCTGCCAGCAACTTCTGTAACCTGTCATaGAACGTGTCTTTCGAGACTTTAGGCAAAATGCTTGTTTTCACT +
Preference number: 6 (lower is better)
Translates to: LAGNVASASNFCNLS*NVSFETLGKMLVFT
Trigger: AGTGAAAACAAGCATTTTGCCTAAAGTCTCGAAAGACACGTTCAATGACAGGTTACAGAAGTTGCTGGCAGAAGCCACATTACCAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp TGGAGATGTTGGAGGGATGACATAGTGTCCTCTGTATaGGAACTTCGGTTAAACCAGTCTAGGACTTTAGAT +
Preference number: 6 (lower is better)
Translates to: WRCWRDDIVSSV*ELRLNQSRTLD
Trigger: ATCTAAAGTCCTAGACTGGTTTAACCGAAGTTCTCATACAGAGGACACTATGTCATCCCTCCAACATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS GCA 72 bp AGTGAGACCGACCTTCATGAGTTGTATCAGGAACCGTaGAAAAAGAATGGAAGTCCTTATTTGGAACAACAG +
Preference number: 6 (lower is better)
Translates to: SETDLHELYQEP*KKNGSPYLEQQ
Trigger: CTGTTGTTCCAAATAAGGACTTCCATTCTTTTTGCACGGTTCCTGATACAACTCATGAAGGTCGGTCTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp TGTGTCATCTTCTGGCTCTTCCACAACAGCTATCTCTaGAGGAAGGACAGCATCTTTGTTAACATTATTCAC +
Preference number: 6 (lower is better)
Translates to: CVIFWLFHNSYL*RKDSIFVNIIH
Trigger: GTGAATAATGTTAACAAAGATGCTGTCCTTCCTCCAGAGATAGCTGTTGTGGAAGAGCCAGAAGATGACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000207578.2
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CCA 72 bp TGGAATTCGGTTTCTTCTTTACCTAAGCTTTCAGGATaGTTAGTGTTCCATGGGACTTGGGCTTCTGAATCA +
Preference number: 6 (lower is better)
Translates to: WNSVSSLPKLSG*LVFHGTWASES
Trigger: TGATTCAGAAGCCCAAGTCCCATGGAACACTAACCATCCTGAAAGCTTAGGTAAAGAAGAAACCGAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CCA 72 bp TTACTTTATCAGACTGGTTACCTACAGCATAGTTTTTaGATAGACCTGACATCAGGGGCCTGGTTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: LLYQTGYLQHSF*IDLTSGAWLFQ
Trigger: CTGAAACAACCAGGCCCCTGATGTCAGGTCTATCCAAAAACTATGCTGTAGGTAACCAGTCTGATAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp AATGTGGCTTCTGCCAGCAACTTCTGTAACCTGTCATaGAACGTGTCTTTCGAGACTTTAGGCAAAATGCTT +
Preference number: 6 (lower is better)
Translates to: NVASASNFCNLS*NVSFETLGKML
Trigger: AAGCATTTTGCCTAAAGTCTCGAAAGACACGTTCAATGACAGGTTACAGAAGTTGCTGGCAGAAGCCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp TCAGCTGTTCTCTTTCCCTTCCTGAATCGCTTGGGCTaGACACTAACTGATAATGAGACAAAGGTGTTTTGT +
Preference number: 6 (lower is better)
Translates to: SAVLFPFLNRLG*TLTDNETKVFC
Trigger: ACAAAACACCTTTGTCTCATTATCAGTTAGTGTCAAGCCCAAGCGATTCAGGAAGGGAAAGAGAACAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 72 bp TCTTCTTCCAGACAGGTATTGTCTGTCATCAAGGCGTaGCTAATCTGTGCTTTTGAGTCTGTTTGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SSSRQVLSVIKA*LICAFESVCCL
Trigger: CAAACAGCAAACAGACTCAAAAGCACAGATTAGCAACGCCTTGATGACAGACAATACCTGTCTGGAAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp ATTGGGACTTTTGAGTCGTCTTCTTCCAGACAGGTATaGTCTGTCATCAAGGCGTTGCTAATCTGTGCTTTT +
Preference number: 6 (lower is better)
Translates to: IGTFESSSSRQV*SVIKALLICAF
Trigger: AAAAGCACAGATTAGCAACGCCTTGATGACAGACAATACCTGTCTGGAAGAAGACGACTCAAAAGTCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp TGGGTGCCTTGTTGGGACAAATTCTCAGAGTTAGACTaGAGAAGTGCATCACTATCTTGGCAAGTTACAGAA +
Preference number: 6 (lower is better)
Translates to: WVPCWDKFSELD*RSASLSWQVTE
Trigger: TTCTGTAACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAACAAGGCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp ATCACTATCTTGGCAAGTTACAGAAACCAGCATAGCTCCTTCTTCTaGGAATGCCAAGTCAGACCTCACAGGCTTCAACTTAACTTTAGT +
Preference number: 6 (lower is better)
Translates to: ITILASYRNQHSSFF*ECQVRPHRLQLNFS
Trigger: ACTAAAGTTAAGTTGAAGCCTGTGAGGTCTGACTTGGCATTCCAAGAAGAAGGAGCTATGCTGGTTTCTGTAACTTGCCAAGATAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp TTGGGACAAATTCTCAGAGTTAGACTTGAGAAGTGCATCACTATCTaGGCAAGTTACAGAAACCAGCATAGCTCCTTCTTCTTGGAATGC +
Preference number: 6 (lower is better)
Translates to: LGQILRVRLEKCITI*ASYRNQHSSFFLEC
Trigger: GCATTCCAAGAAGAAGGAGCTATGCTGGTTTCTGTAACTTGCCAAGATAGTGATGCACTTCTCAAGTCTAACTCTGAGAATTTGTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp CAGCTTCATCTCCTCCTAATTGCTTATCACACTGGCTaGTTTGAGATTCCAAACCACTACATGAAACCTTCA +
Preference number: 6 (lower is better)
Translates to: QLHLLLIAYHTG*FEIPNHYMKPS
Trigger: TGAAGGTTTCATGTAGTGGTTTGGAATCTCAAATCAGCCAGTGTGATAAGCAATTAGGAGGAGATGAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp CTGTTTGAGATCTATTCCTTGGAGATGTTGGAGGGATaGCATAGTGTCCTCTGTATGAGAACTTCGGTTAAA +
Preference number: 6 (lower is better)
Translates to: LFEIYSLEMLEG*HSVLCMRTSVK
Trigger: TTTAACCGAAGTTCTCATACAGAGGACACTATGTCATCCCTCCAACATCTCCAAGGAATAGATCTCAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp GCCTGTGTTTCTCCTGTAATGACCTTTTCTCTGCCTTaGTCCTCTACAAATTGTATAGTTCCATTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: ACVSPVMTFSLP*SSTNCIVPLVS
Trigger: AGAGACCAATGGAACTATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGTCATTACAGGAGAAACACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp AGTGGCACAGAAGTTTGTTTGTTTGTTGCTGTATTATTCCCATCATaGTGTTTACTGTTTACATTAGCTCCCAGGCCCCAAAACTTCCTC +
Preference number: 6 (lower is better)
Translates to: SGTEVCLFVAVLFPS*CLLFTLAPRPQNFL
Trigger: GAGGAAGTTTTGGGGCCTGGGAGCTAATGTAAACAGTAAACACAATGATGGGAATAATACAGCAACAAACAAACAAACTTCTGTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp TCCTGGGAAGCCTGTGTTTCTCCTGTAATGACCTTTTCTCTGCCTTaGTCCTCTACAAATTGTATAGTTCCATTGGTCTCTATTTTATGG +
Preference number: 6 (lower is better)
Translates to: SWEACVSPVMTFSLP*SSTNCIVPLVSILW
Trigger: CCATAAAATAGAGACCAATGGAACTATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGTCATTACAGGAGAAACACAGGCTTCCCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp TTTGAGTCGTCTTCTTCCAGACAGGTATTGTCTGTCATCAAGGCGTaGCTAATCTGTGCTTTTGAGTCTGTTTGCTGTTTGAGATCTATT +
Preference number: 6 (lower is better)
Translates to: FESSSSRQVLSVIKA*LICAFESVCCLRSI
Trigger: AATAGATCTCAAACAGCAAACAGACTCAAAAGCACAGATTAGCAACGCCTTGATGACAGACAATACCTGTCTGGAAGAAGACGACTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp TCCATTGGTCTCTATTTTATGGTCTTCATGAAGTTGTaGGCATTCAGGGACCTCAAACCCACTTTTGTTATC +
Preference number: 6 (lower is better)
Translates to: SIGLYFMVFMKL*AFRDLKPTFVI
Trigger: GATAACAAAAGTGGGTTTGAGGTCCCTGAATGCTCACAACTTCATGAAGACCATAAAATAGAGACCAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS TCA 72 bp ATACATTCATTTGTATCTGGTTCTTGGTCGGCTTTTTaGTCATCTTCAGCACTACGCACTAATTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: IHSFVSGSWSAF*SSSALRTNSSG
Trigger: GCCTGAAGAATTAGTGCGTAGTGCTGAAGATGATCAAAAAGCCGACCAAGAACCAGATACAAATGAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 72 bp CACTGTGGAAATTCCTGGTATACATTCATTTGTATCTaGTTCTTGGTCGGCTTTTTGATCATCTTCAGCACT +
Preference number: 6 (lower is better)
Translates to: HCGNSWYTFICI*FLVGFLIIFST
Trigger: AGTGCTGAAGATGATCAAAAAGCCGACCAAGAACCAGATACAAATGAATGTATACCAGGAATTTCCACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000098310.10
ENSMUST00000107210.3
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000239078.2
CDS CCA 72 bp CTAAGTCATTTGATTTGTAGATCAGTTTTCTGGCTTTaGGGATTGGAGCTTTGGTATGAGACGCATTTTCAG +
Preference number: 6 (lower is better)
Translates to: LSHLICRSVFWL*GLELWYETHFQ
Trigger: CTGAAAATGCGTCTCATACCAAAGCTCCAATCCCCAAAGCCAGAAAACTGATCTACAAATCAAATGACTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000107210.3
ENSMUST00000107211.8
ENSMUST00000190365.8
ENSMUST00000190731.7
ENSMUST00000190837.7
ENSMUST00000208720.2
ENSMUST00000239078.2
CDS CAA 72 bp CTCCTTGGATTTCTGGATGTTCAGTGGCACAGAAGTTaGTTTGTTTGTTGCTGTATTATTCCCATCATTGTG +
Preference number: 6 (lower is better)
Translates to: LLGFLDVQWHRS*FVCCCIIPIIV
Trigger: CACAATGATGGGAATAATACAGCAACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAATCCAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp AAGTCTGTCTTTCTCCAAAGAAGGGTGTGTTTCATTCCCCATAGTTaGAAGTTGAGTTACTTTATCAGACTGGTTACCTACAGCATAGTT +
Preference number: 6 (lower is better)
Translates to: KSVFLQRRVCFIPHS*KLSYFIRLVTYSIV
Trigger: AACTATGCTGTAGGTAACCAGTCTGATAAAGTAACTCAACTTCAAACTATGGGGAATGAAACACACCCTTCTTTGGAGAAAGACAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp GGCGTTAAACTCCTTGGATTTCTGGATGTTCAGTGGCACAGAAGTTaGTTTGTTTGTTGCTGTATTATTCCCATCATTGTGTTTACTGTT +
Preference number: 6 (lower is better)
Translates to: GVKLLGFLDVQWHRS*FVCCCIIPIIVFTV
Trigger: AACAGTAAACACAATGATGGGAATAATACAGCAACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTTTAACGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp ACTTCCTGGGTCTTTTCTCTTGATAATTTCATGGCGTTAAACTCCTaGGATTTCTGGATGTTCAGTGGCACAGAAGTTTGTTTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: TSWVFSLDNFMALNS*DFWMFSGTEVCLFV
Trigger: AACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTTTAACGCCATGAAATTATCAAGAGAAAAGACCCAGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp CAAAGAAGGGTGTGTTTCATTCCCCATAGTTTGAAGTaGAGTTACTTTATCAGACTGGTTACCTACAGCATA +
Preference number: 6 (lower is better)
Translates to: QRRVCFIPHSLK*SYFIRLVTYSI
Trigger: TATGCTGTAGGTAACCAGTCTGATAAAGTAACTCAACTTCAAACTATGGGGAATGAAACACACCCTTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp GTCTTTTCTCTTGATAATTTCATGGCGTTAAACTCCTaGGATTTCTGGATGTTCAGTGGCACAGAAGTTTGT +
Preference number: 6 (lower is better)
Translates to: VFSLDNFMALNS*DFWMFSGTEVC
Trigger: ACAAACTTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTTTAACGCCATGAAATTATCAAGAGAAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp TGTTTCTCCTGTAATGACCTTTTCTCTGCCTTTGTCCTCTACAAATaGTATAGTTCCATTGGTCTCTATTTTATGGTCTTCATGAAGTTG +
Preference number: 6 (lower is better)
Translates to: CFSCNDLFSAFVLYK*YSSIGLYFMVFMKL
Trigger: CAACTTCATGAAGACCATAAAATAGAGACCAATGGAACTATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGTCATTACAGGAGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 90 bp ACTTTATTCTCACTTGATGAATCTGATGGAATGTCTTCTAGACTTTaGGAAGGCAATTTCCTAGCAGCTCTTCTTTCCAGAGTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: TLFSLDESDGMSSRL*EGNFLAALLSRVFK
Trigger: TTTGAAAACTCTGGAAAGAAGAGCTGCTAGGAAATTGCCTTCCAAAAGTCTAGAAGACATTCCATCAGATTCATCAAGTGAGAATAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208720.2
CDS CAA 90 bp TTAAACTCCTTGGATTTCTGGATGTTCAGTGGCACAGAAGTTTGTTaGTTTGTTGCTGTATTATTCCCATCATTGTGTTTACTGTTTACA +
Preference number: 6 (lower is better)
Translates to: LNSLDFWMFSGTEVC*FVAVLFPSLCLLFT
Trigger: TGTAAACAGTAAACACAATGATGGGAATAATACAGCAACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAATCCAAGGAGTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp ATTTCTGGATGTTCAGTGGCACAGAAGTTTGTTTGTTaGTTGCTGTATTATTCCCATCATTGTGTTTACTGT +
Preference number: 6 (lower is better)
Translates to: ISGCSVAQKFVC*LLYYSHHCVYC
Trigger: ACAGTAAACACAATGATGGGAATAATACAGCAACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2
CDS CAA 72 bp TTGGATTTCTGGATGTTCAGTGGCACAGAAGTTTGTTaGTTTGTTGCTGTATTATTCCCATCATTGTGTTTA +
Preference number: 6 (lower is better)
Translates to: LDFWMFSGTEVC*FVAVLFPSLCL
Trigger: TAAACACAATGATGGGAATAATACAGCAACAAACAAACAAACTTCTGTGCCACTGAACATCCAGAAATCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098310.10
ENSMUST00000190365.8
ENSMUST00000239078.2