Pregenerated sensors for SYTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028860Ensembl transcript IDs: ENSMUST00000030674.8, ENSMUST00000105908.10
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCCCCCAGCTGGCGACTaGCCAGGGCCCCATGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRPPAGD*PGPHGP Trigger: GGGACCATGGGGCCCTGGCCAGTCGCCAGCTGGGGG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGTCCGCCTCTGCCACCTaGACACCCCCTTCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRSASAT*TPPSPG Trigger: CCCTGGCGAAGGGGGTGTGCAGGTGGCAGAGGCGGA...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCTGGTCCATGTGCCATaGGGAGGGAGGGCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRLVHVP*GGRAGP Trigger: GGGCCCTGCCCTCCCTCCCCATGGCACATGGACCAG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGAGCTCGGCACAGGCCTaGCGTAGGTCAGCAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRSSAQA*RRSAGP Trigger: CGGGCCTGCTGACCTACGCCAGGCCTGTGCCGAGCT...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACACCCCCAGCTGGCGACTaGCCAGGGCCCCATGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTPPAGD*PGPHGP Trigger: GGGACCATGGGGCCCTGGCCAGTCGCCAGCTGGGGG...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCTCGCACCTGCACCGTaGCTGCCTCTGCCTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGLAPAP*LPLPPR Trigger: CCGGGGAGGCAGAGGCAGGCACGGTGCAGGTGCGAG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCGCCCTTCCTCCAGCTaGCGCAGGTGGGCATCTCGT | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRRPSSS*RRWASR Trigger: ACGAGATGCCCACCTGCGCCAGCTGGAGGAAGGGCG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGCTCGCACCTGCACCGTaGCTGCCTCTGCCTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKLAPAP*LPLPPR Trigger: CCGGGGAGGCAGAGGCAGGCACGGTGCAGGTGCGAG...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTGGAGGAACCCGAGGCTaGAGGGGGAGCCAGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGGGTRG*RGSQVA Trigger: GGCTACCTGGCTCCCCCTGCAGCCTCGGGTTCCTCC...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCGCCTTGGACTGGGCTaGAGTTGGCTGGGACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRRLGLG*SWLGLL Trigger: CAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGGCCAGGCCCTGGCACTaGATCACCTGTACTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRARPWH*ITCTRS Trigger: GCTGCGAGTACAGGTGATCCAGTGCCAGGGCCTGGC...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCTGGCCAGGGCCCCATaGTCCCACAGGGAGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGLARAP*SHRESS Trigger: CGAGCTCTCCCTGTGGGACCATGGGGCCCTGGCCAG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCAGAGGAGCTGCTGCTaGGCATGCGGTCAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRQRSCC*ACGQER Trigger: CCTCTCTTGACCGCATGCTCAGCAGCAGCTCCTCTG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGTCCGCCTCTGCCACCTaGACACCCCCTTCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLSASAT*TPPSPG Trigger: CCCTGGCGAAGGGGGTGTGCAGGTGGCAGAGGCGGA...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCCTGGGAGATCAGCCTaGTGGACAGAGTGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRPGRSA*WTECRR Trigger: TCTGCGGCACTCTGTCCAGCAGGCTGATCTCCCAGG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR GCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGTTCGAACCACTCTTGTaGGTTGGCGGCTGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRFEPLL*VGGWPD Trigger: GTCGGGCCAGCCGCCAACGCACAAGAGTGGTTCGAA...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGCTGGTCCATGTGCCATaGGGAGGGAGGGCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLLVHVP*GGRAGP Trigger: GGGCCCTGCCCTCCCTCCCCATGGCACATGGACCAG...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGGAGCTGCCACCTCTATaGAGACCCTGGACTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRELPPL*RPWTPA Trigger: AGCCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTC...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGGGGAGATCAGCCTGCTaGACAGAGTGCCGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRGRSAC*TECRRV Trigger: GACTCTGCGGCACTCTGTCCAGCAGGCTGATCTCCC...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR CCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGAGCTCGGCACAGGCCTaGCGTAGGTCAGCAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKSSAQA*RRSAGP Trigger: CGGGCCTGCTGACCTACGCCAGGCCTGTGCCGAGCT...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCCCAGACTTTCCCGGTaGCACACGGACAGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGPRLSR*HTDRLS Trigger: GCTGAGCCTGTCCGTGTGGCACCGGGAAAGTCTGGG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGTCCAGCTGGCGCAGGTaGGCATCTCGTTTGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRSSWRR*ASRLRT Trigger: TGTCCTCAAACGAGATGCCCACCTGCGCCAGCTGGA...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGCGCCCTTCCTCCAGCTaGCGCAGGTGGGCATCTCGT | + |
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Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKRPSSS*RRWASR Trigger: ACGAGATGCCCACCTGCGCCAGCTGGAGGAAGGGCG...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGTCTTGGAGGTCGCCTTaGACTGGGCTGGAGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRSWRSP*TGLELA Trigger: AGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGA...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTGCCAGGCCCTGGCACTaGATCACCTGTACTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGARPWH*ITCTRS Trigger: GCTGCGAGTACAGGTGATCCAGTGCCAGGGCCTGGC...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTGCAGCGGCCAGGCCCTaGCACTGGATCACCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGAAARP*HWITCT Trigger: AGTACAGGTGATCCAGTGCCAGGGCCTGGCCGCTGC...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAGCAGCGGCCAGGCCCTaGCACTGGATCACCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTAAARP*HWITCT Trigger: AGTACAGGTGATCCAGTGCCAGGGCCTGGCCGCTGC...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGGCTCAGCACGCGGCCTaGGAGATCAGCCTGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLAQHAA*EISLLD Trigger: GTCCAGCAGGCTGATCTCCCAGGCCGCGTGCTGAGC...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGGCTGGGAAGCTCATCTaGAGATGGAGGAACCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRAGKLI*RWRNPQ Trigger: CTGCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGC...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGGCCCAAAGCCTCTCCTaGGATGGGTGGCCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLAQSLS*DGWPLW Trigger: CCAGAGAGGCCACCCATCTCAGGAGAGGCTTTGGGC...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGCCCAAAGCCTCTCCTaGGATGGGTGGCCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKAQSLS*DGWPLW Trigger: CCAGAGAGGCCACCCATCTCAGGAGAGGCTTTGGGC...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCCTCTGTCAGGAAGCTaGGGTCCAGCAACCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGPLSGS*GPATPQ Trigger: CTGAGGGGTTGCTGGACCTCAGCTTCCTGACAGAGG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCAGAGGAGCTGCTGCTaGGCATGCGGTCAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGQRSCC*ACGQER Trigger: CCTCTCTTGACCGCATGCTCAGCAGCAGCTCCTCTG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGGCCGCAGAGTCTCGTTaGAGATCGGGTTCAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRAAESR*RSGSDS Trigger: GGAATCTGAACCCGATCTTCAACGAGACTCTGCGGC...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR TCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACACTGTCCTCCTCCCTCTaGGCCGGCAGGGACATACTT | + |
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Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTLSSSL*AGRDIL Trigger: AAGTATGTCCCTGCCGGCTCAGAGGGAGGAGGACAG...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGATCCTGGTCCATGTaGCATGGGGAGGGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTRSWSM*HGEGGQ Trigger: CTGCCCTCCCTCCCCATGGCACATGGACCAGGATCT...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR GCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTCGAACCACTCTTGTaGGTTGGCGGCTGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGFEPLL*VGGWPD Trigger: GTCGGGCCAGCCGCCAACGCACAAGAGTGGTTCGAA...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTCCAGCTCACATTCCTaGTCCTGGGGCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGSSSHS*SWGSSS Trigger: GGAGGAGGAGCCCCAGGACCAGGAATGTGAGCTGGA...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACATCCAGCTCACATTCCTaGTCCTGGGGCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTSSSHS*SWGSSS Trigger: GGAGGAGGAGCCCCAGGACCAGGAATGTGAGCTGGA...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGCGCCTTGGACTGGGCTaGAGTTGGCTGGGACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLRLGLG*SWLGLL Trigger: CAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCG...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGAAGCTCATCTGGAGATaGAGGAACCCGAGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRKLIWR*RNPRLQ Trigger: CTGCAGCCTCGGGTTCCTCCATCTCCAGATGAGCTT...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGACAGCAGTCCACGGCTaGGAAGCTCATCTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRTAVHG*EAHLEM Trigger: CATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGT...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACATTGTGCGTTGGCGGCTaGCCCGACTGTCATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTLCVGG*PDCHQA Trigger: TGCCTGATGACAGTCGGGCCAGCCGCCAACGCACAA...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS-3UTR TCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGACCAGGTTGGTTCTaGGGGGCAGAAGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKGPGWF*GAEGHP Trigger: TGGATGGCCTTCTGCCCCTCAGAACCAACCTGGTCC...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGAGATCCTGGTCCATGTaGCATGGGGAGGGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLRSWSM*HGEGGQ Trigger: CTGCCCTCCCTCCCCATGGCACATGGACCAGGATCT...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTGTCAGGATCTTCAGCTaGCAGGGGTCTTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGVRIFS*QGSSRE Trigger: CTCCCTGGAAGACCCCTGGCAGCTGAAGATCCTGAC...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCTGACGTCTTACGCTTaGTCTGCTTATCCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRLTSYA*SAYPGG Trigger: TCCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTAAGCCTCTCCTGAGATaGGTGGCCTCTCTGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGKPLLR*VASLGH Trigger: ATGCCCCAGAGAGGCCACCCATCTCAGGAGAGGCTT...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAAGCCTCTCCTGAGATaGGTGGCCTCTCTGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTKPLLR*VASLGH Trigger: ATGCCCCAGAGAGGCCACCCATCTCAGGAGAGGCTT...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTGGGAACGCGCTTCTTaGAACCAGTCCCCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGWERAS*NQSPVR Trigger: CCTGACAGGGGACTGGTTCCAAGAAGCGCGTTCCCA...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACATGGGAACGCGCTTCTTaGAACCAGTCCCCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTWERAS*NQSPVR Trigger: CCTGACAGGGGACTGGTTCCAAGAAGCGCGTTCCCA...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGGAGCTGCCACCTCTATaGAGACCCTGGACTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLELPPL*RPWTPA Trigger: AGCCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTC...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAGCTTCTCCTCCGGTGTaGAATCCATCCAGGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTASPPV*NPSRAP Trigger: AGGTGCCCTGGATGGATTCCACACCGGAGGAGAAGC...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGTCAGGATCTTCAGCTaGCAGGGGTCTTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKVRIFS*QGSSRE Trigger: CTCCCTGGAAGACCCCTGGCAGCTGAAGATCCTGAC...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGTTCCCCAGCAGCCTCTaGTTCACCATCACTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKFPSSL*FTITPQ Trigger: CTGGGGAGTGATGGTGAAGCAGAGGCTGCTGGGGAA...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGTCCAGCTGGCGCAGGTaGGCATCTCGTTTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKSSWRR*ASRLRT Trigger: TGTCCTCAAACGAGATGCCCACCTGCGCCAGCTGGA...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGCCTGGTCCCCCTTTaGGCTCTTCTTCCTTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTSLVPL*ALLPSD Trigger: ATCCGAAGGAAGAAGAGCCCAAAGGGGGACCAGGCT...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACACCGGCTCTCCTTCAATaGTGTTTTCCCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTPALLQ*CFPQQP Trigger: AGGCTGCTGGGGAAAACACCATTGAAGGAGAGCCGG...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCTCAGTGTTTCTCTCTaGAGCTGCCACCTCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRLSVSL*SCHLYG Trigger: TCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGTCTTGGAGGTCGCCTTaGACTGGGCTGGAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLSWRSP*TGLELA Trigger: AGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGA...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGGCTGGGAAGCTCATCTaGAGATGGAGGAACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLAGKLI*RWRNPR Trigger: CCTCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGC...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAACAGCAGTCCACGGCTaGGAAGCTCATCTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTTAVHG*EAHLEM Trigger: CATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGT...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGCTTCTCCTCCGGTGTaGAATCCATCCAGGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKASPPV*NPSRAP Trigger: AGGTGCCCTGGATGGATTCCACACCGGAGGAGAAGC...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR TCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGTGGTACCAGGCTCTaGGCTTCCTTTACCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTSGTRL*ASFTQK Trigger: CTTCTGGGTAAAGGAAGCTCAGAGCCTGGTACCACT...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR TCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTAGTGGTACCAGGCTCTaGGCTTCCTTTACCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGSGTRL*ASFTQK Trigger: CTTCTGGGTAAAGGAAGCTCAGAGCCTGGTACCACT...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR TCA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGGTCATCAGGCAGCACTaGGCATTGAATGTAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSGHGCALGGGPQKGLTRVIRQH*ALNVSV Trigger: GACACTTACATTCAATGCTCAGTGCTGCCTGATGAC...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR TCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGCCCGCAGAGTCTCGTTaGAGATCGGGTTCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLPAESR*RSGSDS Trigger: GGAATCTGAACCCGATCTTCAACGAGACTCTGCGGG...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAGTTTCTCTCTGGAGCTaGCACCTCTATGGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTVSLWS*HLYGDP Trigger: AGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAAC...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGCTCCCAGGAAGATGTTaGGACCCAGACTTTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKLPGRC*DPDFPG Trigger: ACCGGGAAAGTCTGGGTCGCAACATCTTCCTGGGAG...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGCTCAGCTTCAGATCCTaGTCCATGTGCCATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLLSFRS*SMCHGE Trigger: CTCCCCATGGCACATGGACCAGGATCTGAAGCTGAG...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGAGCCTGGTCCCCCTTTaGGCTCTTCTTCCTTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLSLVPL*ALLPSD Trigger: ATCCGAAGGAAGAAGAGCCCAAAGGGGGACCAGGCT...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGCATTCTCCAGGATCTTaGAGGTCGCCTTGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKHSPGS*RSPWTG Trigger: CCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATG...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGCATTCTCCAGGATCTTaGAGGTCGCCTTGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLHSPGS*RSPWTG Trigger: CCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATG...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGTTTCTCTCTGGAGCTaGCACCTCTATGGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKVSLWS*HLYGDP Trigger: AGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAAC...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGCTGACGTCTTACGCTTaGTCTGCTTATCCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKLTSYA*SAYPGG Trigger: TCCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAG...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCTCAGTGTTTCTCTCTaGAGCTGCCACCTCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGLSVSL*SCHLYG Trigger: TCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGAAGCTCATCTGGAGATaGAGGAACCCGCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIDSGHGCALGGGPQKGLKLIWR*RNPQSL Trigger: GAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCTT...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
||
| CDS-3UTR TCA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTATTCCGTTTCTTCACTaGCGTCTTACGCTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFIDSGHGCALGGGPQKGIPFLH*RLTLAL Trigger: CAGAGCAAGCGTAAGACGTCAGTGAAGAAACGGAAT...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR TCA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGATTCCGTTTCTTCACTaGCGTCTTACGCTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDFIDSGHGCALGGGPQKIPFLH*RLTLAL Trigger: CAGAGCAAGCGTAAGACGTCAGTGAAGAAACGGAAT...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CCA 90 bp | ATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAACAAATCAGGCCCTTaGGTCTCAGTGTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDSGHGCALGGGPQKGLTNKSGP*VSVFLS Trigger: AGAGAGAAACACTGAGACCCAAGGGCCTGATTTGTT...TGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS GCA 90 bp | GCTCGTAGCGCAGCGAGAAGAGCACGGAGCCTCGCACCTGCACCGTaGCTGCCTCTGCCTCCCCGGATAGGCTCATCAGGCTGCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSAARRARSLAPAP*LPLPPRIGSSGCRS Trigger: TGAGCGGCAGCCTGATGAGCCTATCCGGGGAGGCAGAGGCAGGCACGGTGCAGGTGCGAGGCTCCGTGCTCTTCTCGCTGCGCTACGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 90 bp | TCCGCCTTCTGCTCAGGATCCAGCTCTGGGTCCGCCTCTGCCACCTaGACACCCCCTTCGCCAGGGGCCTCCAGCTCACATTCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAFCSGSSSGSASAT*TPPSPGASSSHSWS Trigger: GGACCAGGAATGTGAGCTGGAGGCCCCTGGCGAAGGGGGTGTGCAGGTGGCAGAGGCGGACCCAGAGCTGGATCCTGAGCAGAAGGCGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 90 bp | CGGCCAGGCCCTGGCACTGGATCACCTGTACTCGCAGCTCAGAGGTaGCAGGCTCGTAGCGCAGCGAGAAGAGCACGGAGCCTCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RPGPGTGSPVLAAQR*QARSAARRARSLAP Trigger: AGGTGCGAGGCTCCGTGCTCTTCTCGCTGCGCTACGAGCCTGGCACCTCTGAGCTGCGAGTACAGGTGATCCAGTGCCAGGGCCTGGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 90 bp | TGGGAACGCGCTTCTTGGAACCAGTCCCCTGTCAGGATCTTCAGCTaGCAGGGGTCTTCCAGGGAGGCCCGGAGCTTGCTGACCCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WERASWNQSPVRIFS*QGSSREARSLLTRP Trigger: AGGGCGGGTCAGCAAGCTCCGGGCCTCCCTGGAAGACCCCTGGCAGCTGAAGATCCTGACAGGGGACTGGTTCCAAGAAGCGCGTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 90 bp | GGCAGAAGGCCATCCACCCACTCACAGGGCCGCTCCAGGAGTGTCTaGCACAGCTGCTTCTCCTCCGGTGTGGAATCCATCCAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GRRPSTHSQGRSRSV*HSCFSSGVESIQGT Trigger: GGTGCCCTGGATGGATTCCACACCGGAGGAGAAGCAGCTGTGGCAGACACTCCTGGAGCGGCCCTGTGAGTGGGTGGATGGCCTTCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | GAGGCCCGGAGCTTGCTGACCCGCCCTTCCTCCAGCTGGCGCAGGTaGGCATCTCGTTTGAGGACATCAGAGATGGCCTCCTGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EARSLLTRPSSSWRR*ASRLRTSEMASCSS Trigger: GGAGGAACAGGAGGCCATCTCTGATGTCCTCAAACGAGATGCCCACCTGCGCCAGCTGGAGGAAGGGCGGGTCAGCAAGCTCCGGGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | TCTTCCAGGGAGGCCCGGAGCTTGCTGACCCGCCCTTCCTCCAGCTaGCGCAGGTGGGCATCTCGTTTGAGGACATCAGAGATGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSREARSLLTRPSSS*RRWASRLRTSEMAS Trigger: GGAGGCCATCTCTGATGTCCTCAAACGAGATGCCCACCTGCGCCAGCTGGAGGAAGGGCGGGTCAGCAAGCTCCGGGCCTCCCTGGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | ACCCAGACTTTCCCGGTGCCACACGGACAGGCTCAGCACGCGGCCTaGGAGATCAGCCTGCTGGACAGAGTGCCGCAGAGTCTCGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TQTFPVPHGQAQHAA*EISLLDRVPQSLVE Trigger: TTCAACGAGACTCTGCGGCACTCTGTCCAGCAGGCTGATCTCCCAGGCCGCGTGCTGAGCCTGTCCGTGTGGCACCGGGAAAGTCTGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS CCA 90 bp | AAGGGACAGAGACAGCAGTCCACGGCTGGGAAGCTCATCTGGAGATaGAGGAACCCGAGGCTGCAGGGGGAGCCAGGTAGCCTCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGQRQQSTAGKLIWR*RNPRLQGEPGSLRV Trigger: GACTCTGAGGCTACCTGGCTCCCCCTGCAGCCTCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCTCTGTCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS CCA 90 bp | TCCATTCTCCAGGATCTTGGAGGTCGCCTTGGACTGGGCTGGAGTTaGCTGGGACTCCTGCTCCGCCTTCTGCTCAGGATCCAGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SILQDLGGRLGLGWS*LGLLLRLLLRIQLW Trigger: CCAGAGCTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGTGGACTGGGCTGGAGTaGGCTGGGACTCCTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DSGHGCALGGGPQKGLTRWTGLE*AGTPAP Trigger: CGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCA...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | AGCAGCCTCTGCTTCACCATCACTCCCCAGAGCCTGGTCCCCCTTTaGGCTCTTCTTCCTTCGGATAGAAGCCCGGACGAGGTCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SSLCFTITPQSLVPL*ALLPSDRSPDEVRT Trigger: GGTTCTGACCTCGTCCGGGCTTCTATCCGAAGGAAGAAGAGCCCAAAGGGGGACCAGGCTCTGGGGAGTGATGGTGAAGCAGAGGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | CTCTTCTCCATTCTCCAGGATCTTGGAGGTCGCCTTGGACTGGGCTaGAGTTGGCTGGGACTCCTGCTCCGCCTTCTGCTCAGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFSILQDLGGRLGLG*SWLGLLLRLLLRIQ Trigger: CTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATGGAGAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | ATACTTAAGGGACAGAGACAGCAGTCCACGGCTGGGAAGCTCATCTaGAGATGGAGGAACCCGAGGCTGCAGGGGGAGCCAGGTAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKGQRQQSTAGKLI*RWRNPRLQGEPGSL Trigger: GAGGCTACCTGGCTCCCCCTGCAGCCTCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCTCTGTCCCTTAAGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS TCA 90 bp | TTCCTTCGGATAGAAGCCCGGACGAGGTCAGAACCAAAATGGGCGTaGTGGTGCCTCTGGGAACGCGCTTCTTGGAACCAGTCCCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRIEARTRSEPKWA*WCLWERASWNQSPV Trigger: GACAGGGGACTGGTTCCAAGAAGCGCGTTCCCAGAGGCACCATCACGCCCATTTTGGTTCTGACCTCGTCCGGGCTTCTATCCGAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 90 bp | AGTTCCATGTGTCTAGGGGCACTTCTACTTCTCCCAGGAAGATGTTaGGACCCAGACTTTCCCGGTGCCACACGGACAGGCTCAGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: SSMCLGALLLLPGRC*DPDFPGATRTGSAR Trigger: GCGTGCTGAGCCTGTCCGTGTGGCACCGGGAAAGTCTGGGTCGCAACATCTTCCTGGGAGAAGTAGAAGTGCCCCTAGACACATGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGTGGACTGGGCTGGAGTaGGCTGGGACTCCTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TDFIDSGHGCALGGGPQKWTGLE*AGTPAP Trigger: CGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCA...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | GATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACAAGGCCATTCTCCAGGATCTaGGAGGTCGCCTTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSGHGCALGGGPQKGLTRPFSRI*EVALDW Trigger: CCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATGG...CCTTGTCAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS TCA 90 bp | CCAGGGGCCTCCAGCTCACATTCCTGGTCCTGGGGCTCCTCCTCCTaGCCTTCGGAAGCCTTTGAGGGTACATATGGTGAGAACAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PGASSSHSWSWGSSS*PSEAFEGTYGENKS Trigger: TGATTTGTTCTCACCATATGTACCCTCAAAGGCTTCCGAAGGTCAGGAGGAGGAGCCCCAGGACCAGGAATGTGAGCTGGAGGCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS CCA 90 bp | AAGGGACAGAGACAGCAGTCCACGGCTGGGAAGCTCATCTGGAGATaGAGGAACCCGCAGAGTCTCGTTGAAGATCGGGTTCAGATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KGQRQQSTAGKLIWR*RNPQSLVEDRVQIP Trigger: CGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCTCTGTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCTGGGAACGCGCTTCTaGGAACCAGTCCCCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DFIDSGHGCALGGGPQKGLGTRF*EPVPCQ Trigger: CTGACAGGGGACTGGTTCCAAGAAGCGCGTTCCCAG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTGAGCCTGGTCCCCCTTaGGGCTCTTCTTCCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: DFIDSGHGCALGGGPQKGEPGPP*GSSSFG Trigger: TCCGAAGGAAGAAGAGCCCAAAGGGGGACCAGGCTC...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS TCA 90 bp | GGCCTGGGAGATCAGCCTGCTGGACAGAGTGCCGCAGAGTCTCGTTaGAGATCGGGTTCAGATTCCGTTTCTTCACTGACGTCTTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGDQPAGQSAAESR*RSGSDSVSSLTSYA Trigger: AGCGTAAGACGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGCACTCTGTCCAGCAGGCTGATCTCCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGAGCCTGGTCCCCCTTaGGGCTCTTCTTCCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDFIDSGHGCALGGGPQKEPGPP*GSSSFG Trigger: TCCGAAGGAAGAAGAGCCCAAAGGGGGACCAGGCTC...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 90 bp | ATACTTAAGGGACAGAGACAGCAGTCCACGGCTGGGAAGCTCATCTaGAGATGGAGGAACCCGCAGAGTCTCGTTGAAGATCGGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILKGQRQQSTAGKLI*RWRNPQSLVEDRVQ Trigger: CTGAACCCGATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCTCTGTCCCTTAAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTAGGTGGGCATCTCGTTaGAGGACATCAGAGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DFIDSGHGCALGGGPQKGRWASR*RTSEMA Trigger: GGCCATCTCTGATGTCCTCAAACGAGATGCCCACCT...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | GACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTCTCAGCGTAGAGGAATaGAGGCTGGACACAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DFIDSGHGCALGGGPQKGLSVEE*RLDTEE Trigger: CTCCTCTGTGTCCAGCCTCAATTCCTCTACGCTGAG...ACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS TCA 90 bp | GGCTGGGAAGCTCATCTGGAGATGGAGGAACCCGCAGAGTCTCGTTaGAGATCGGGTTCAGATTCCGTTTCTTCACTGACGTCTTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GWEAHLEMEEPAESR*RSGSDSVSSLTSYA Trigger: AGCGTAAGACGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGAGGTGGGCATCTCGTTaGAGGACATCAGAGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FIDSGHGCALGGGPQKGLRWASR*RTSEMA Trigger: GGCCATCTCTGATGTCCTCAAACGAGATGCCCACCT...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | ACAGACTTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGACTGACGTCTTACGCTaGCTCTGCTTATCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TDFIDSGHGCALGGGPQKTDVLR*LCLSGR Trigger: CCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAGT...CTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAAGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS-3UTR CAA 90 bp | TTTATTGATTCCGGCCATGGGTGTGCTTTAGGTGGGGGTCCACAGAAGGGTTTGACTGACGTCTTACGCTaGCTCTGCTTATCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FIDSGHGCALGGGPQKGLTDVLR*LCLSGR Trigger: CCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAGT...CAAACCCTTCTGTGGACCCCCACCTAAAGCACACCCATGGCCGGAATCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS TCA 90 bp | CCGCAGAGTCTCGTTGAAGATCGGGTTCAGATTCCGTTTCTTCACTaGCGTCTTACGCTTGCTCTGCTTATCCGGGAGGAGGTAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQSLVEDRVQIPFLH*RLTLALLIREEVAF Trigger: AAAAGCTACCTCCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 72 bp | CGCCTTCTGCTCAGGATCCAGCTCTGGGTCCGCCTCTaGCACCTGCACACCCCCTTCGCCAGGGGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLLRIQLWVRL*HLHTPFARGLQ Trigger: CTGGAGGCCCCTGGCGAAGGGGGTGTGCAGGTGGCAGAGGCGGACCCAGAGCTGGATCCTGAGCAGAAGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | GGACTCCTGCTCCGCCTTCTGCTCAGGATCCAGCTCTaGGTCCGCCTCTGCCACCTGCACACCCCCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLLRLLLRIQL*VRLCHLHTPFA Trigger: GGCGAAGGGGGTGTGCAGGTGGCAGAGGCGGACCCAGAGCTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 72 bp | TGGGCTGGAGTTGGCTGGGACTCCTGCTCCGCCTTCTaGTCAGGATCCAGCTCTGGGTCCGCCTCTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: WAGVGWDSCSAF*SGSSSGSASAT Trigger: GGTGGCAGAGGCGGACCCAGAGCTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | TTCCCGGTGCCACACGGACAGGCTCAGCACGCGGCCTaGGAGATCAGCCTGCTGGACAGAGTGCCGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPVPHGQAQHAA*EISLLDRVPQS Trigger: ACTCTGCGGCACTCTGTCCAGCAGGCTGATCTCCCAGGCCGCGTGCTGAGCCTGTCCGTGTGGCACCGGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS GCA 72 bp | GTCGCCTTGGACTGGGCTGGAGTTGGCTGGGACTCCTaGTCCGCCTTCTGCTCAGGATCCAGCTCTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VALDWAGVGWDS*SAFCSGSSSGS Trigger: GGACCCAGAGCTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | GAGGCCCGGAGCTTGCTGACCCGCCCTTCCTCCAGCTaGCGCAGGTGGGCATCTCGTTTGAGGACATCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EARSLLTRPSSS*RRWASRLRTSE Trigger: CTCTGATGTCCTCAAACGAGATGCCCACCTGCGCCAGCTGGAGGAAGGGCGGGTCAGCAAGCTCCGGGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CAA 72 bp | CCGAGCCCCGGGGCCTCTTCTCCATTCTCCAGGATCTaGGAGGTCGCCTTGGACTGGGCTGGAGTTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSPGASSPFSRI*EVALDWAGVGW Trigger: CCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATGGAGAAGAGGCCCCGGGGCTCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CAA 90 bp | AGCCCCGGGGCCTCTTCTCCATTCTCCAGGATCTTGGAGGTCGCCTaGGACTGGGCTGGAGTTGGCTGGGACTCCTGCTCCGCCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGASSPFSRILEVA*DWAGVGWDSCSAFC Trigger: GCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATGGAGAAGAGGCCCCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 72 bp | CCTGGCACTGGATCACCTGTACTCGCAGCTCAGAGGTaGCAGGCTCGTAGCGCAGCGAGAAGAGCACGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGTGSPVLAAQR*QARSAARRARS Trigger: GCTCCGTGCTCTTCTCGCTGCGCTACGAGCCTGGCACCTCTGAGCTGCGAGTACAGGTGATCCAGTGCCAGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS GCA 72 bp | CACTCACAGGGCCGCTCCAGGAGTGTCTGCCACAGCTaGTTCTCCTCCGGTGTGGAATCCATCCAGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: HSQGRSRSVCHS*FSSGVESIQGT Trigger: GGTGCCCTGGATGGATTCCACACCGGAGGAGAAGCAGCTGTGGCAGACACTCCTGGAGCGGCCCTGTGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | AGACAGCAGTCCACGGCTGGGAAGCTCATCTGGAGATaGAGGAACCCGAGGCTGCAGGGGGAGCCAGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RQQSTAGKLIWR*RNPRLQGEPGS Trigger: GCTACCTGGCTCCCCCTGCAGCCTCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS CCA 72 bp | GGACAGAGACAGCAGTCCACGGCTGGGAAGCTCATCTaGAGATGGAGGAACCCGAGGCTGCAGGGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GQRQQSTAGKLI*RWRNPRLQGEP Trigger: TGGCTCCCCCTGCAGCCTCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCTCTGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS GCA 72 bp | GCTTCTTGGAACCAGTCCCCTGTCAGGATCTTCAGCTaGCAGGGGTCTTCCAGGGAGGCCCGGAGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASWNQSPVRIFS*QGSSREARSLL Trigger: CAGCAAGCTCCGGGCCTCCCTGGAAGACCCCTGGCAGCTGAAGATCCTGACAGGGGACTGGTTCCAAGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | ATCTTGGAGGTCGCCTTGGACTGGGCTGGAGTTGGCTaGGACTCCTGCTCCGCCTTCTGCTCAGGATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILEVALDWAGVG*DSCSAFCSGSS Trigger: GCTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CAA 72 bp | CCAGGATCTTGGAGGTCGCCTTGGACTGGGCTGGAGTaGGCTGGGACTCCTGCTCCGCCTTCTGCTCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGSWRSPWTGLE*AGTPAPPSAQD Trigger: ATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CAA 90 bp | CTCCATTCTCCAGGATCTTGGAGGTCGCCTTGGACTGGGCTGGAGTaGGCTGGGACTCCTGCTCCGCCTTCTGCTCAGGATCCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHSPGSWRSPWTGLE*AGTPAPPSAQDPAL Trigger: CAGAGCTGGATCCTGAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS TCA 72 bp | GCCCTTCCTCCAGCTGGCGCAGGTGGGCATCTCGTTTaGGGACATCAGAGATGGCCTCCTGTTCCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALPPAGAGGHLV*GHQRWPPVPPL Trigger: CAGAGGAGGAACAGGAGGCCATCTCTGATGTCCTCAAACGAGATGCCCACCTGCGCCAGCTGGAGGAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | ATTCTCCAGGATCTTGGAGGTCGCCTTGGACTGGGCTaGAGTTGGCTGGGACTCCTGCTCCGCCTTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILQDLGGRLGLG*SWLGLLLRLLL Trigger: GAGCAGAAGGCGGAGCAGGAGTCCCAGCCAACTCCAGCCCAGTCCAAGGCGACCTCCAAGATCCTGGAGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CAA 72 bp | CTGGTCCTGGGGCTCCTCCTCCTGACCTTCGGAAGCTaGGGTCTCAGTGTTTCTCTCTGGAGCTGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVLGLLLLTFGS*GLSVSLWSCHL Trigger: GAGGTGGCAGCTCCAGAGAGAAACACTGAGACCCAAGCTTCCGAAGGTCAGGAGGAGGAGCCCCAGGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
||
| CDS CCA 72 bp | ACAGGGCTGAGACTTCTTCGAACCACTCTTGTGCGTTaGCGGCTGGCCCGACTGTCATCAGGCAGCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGLRLLRTTLVR*RLARLSSGSTE Trigger: CTCAGTGCTGCCTGATGACAGTCGGGCCAGCCGCCAACGCACAAGAGTGGTTCGAAGAAGTCTCAGCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
||
| CDS CAA 90 bp | CAGTTCCATGTGTCTAGGGGCACTTCTACTTCTCCCAGGAAGATGTaGCGACCCAGACTTTCCCGGTGCCACACGGACAGGCTCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: QFHVSRGTSTSPRKM*RPRLSRCHTDRLST Trigger: CGTGCTGAGCCTGTCCGTGTGGCACCGGGAAAGTCTGGGTCGCAACATCTTCCTGGGAGAAGTAGAAGTGCCCCTAGACACATGGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
||
| CDS CAA 90 bp | CTCACATTCCTGGTCCTGGGGCTCCTCCTCCTGACCTTCGGAAGCTaGGGTCTCAGTGTTTCTCTCTGGAGCTGCCACCTCTATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LTFLVLGLLLLTFGS*GLSVSLWSCHLYGD Trigger: GTCTCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAGACCCAAGCTTCCGAAGGTCAGGAGGAGGAGCCCCAGGACCAGGAATGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS GCA 72 bp | TGTCTAGGGGCACTTCTACTTCTCCCAGGAAGATGTTaGGACCCAGACTTTCCCGGTGCCACACGGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: CLGALLLLPGRC*DPDFPGATRTG Trigger: GCCTGTCCGTGTGGCACCGGGAAAGTCTGGGTCGCAACATCTTCCTGGGAGAAGTAGAAGTGCCCCTAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS GCA 72 bp | TTCGGAAGCTTGGGTCTCAGTGTTTCTCTCTGGAGCTaGCACCTCTATGGAGACCCTGGACTCCGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FGSLGLSVSLWS*HLYGDPGLRLS Trigger: GGAGAGCCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAGACCCAAGCTTCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS CCA 72 bp | CCAGCAGCCTCTGCTTCACCATCACTCCCCAGAGCCTaGTCCCCCTTTGGGCTCTTCTTCCTTCGGATAGAA | + |
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Preference number: 6 (lower is better) Translates to: PAASASPSLPRA*SPFGLFFLRIE Trigger: TTCTATCCGAAGGAAGAAGAGCCCAAAGGGGGACCAGGCTCTGGGGAGTGATGGTGAAGCAGAGGCTGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CCA 72 bp | CTGACCTTCGGAAGCTTGGGTCTCAGTGTTTCTCTCTaGAGCTGCCACCTCTATGGAGACCCTGGACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LTFGSLGLSVSL*SCHLYGDPGLR Trigger: CCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAGACCCAAGCTTCCGAAGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS CAA 90 bp | CGGCCTGGGAGATCAGCCTGCTGGACAGAGTGCCGCAGAGTCTCGTaGAAGATCGGGTTCAGATTCCGTTTCTTCACTGACGTCTTACGC | + |
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Preference number: 6 (lower is better) Translates to: RPGRSACWTECRRVS*KIGFRFRFFTDVLR Trigger: GCGTAAGACGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGCACTCTGTCCAGCAGGCTGATCTCCCAGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS TCA 72 bp | TCCAGCTCACATTCCTGGTCCTGGGGCTCCTCCTCCTaGCCTTCGGAAGCCTTTGAGGGTACATATGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSHSWSWGSSS*PSEAFEGTYGE Trigger: CTCACCATATGTACCCTCAAAGGCTTCCGAAGGTCAGGAGGAGGAGCCCCAGGACCAGGAATGTGAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS CCA 72 bp | CCTCTATGGAGACCCTGGACTCCGGCTCTCCTTCAATaGTGTTTTCCCCAGCAGCCTCTGCTTCACCATCAC | + |
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Preference number: 6 (lower is better) Translates to: PLWRPWTPALLQ*CFPQQPLLHHH Trigger: GTGATGGTGAAGCAGAGGCTGCTGGGGAAAACACCATTGAAGGAGAGCCGGAGTCCAGGGTCTCCATAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CCA 72 bp | GGGTCTCAGTGTTTCTCTCTGGAGCTGCCACCTCTATaGAGACCCTGGACTCCGGCTCTCCTTCAATGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GSQCFSLELPPL*RPWTPALLQWC Trigger: ACACCATTGAAGGAGAGCCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CCA 72 bp | GAACAAATCAGGCCCTTGGGTCTCAGTGTTTCTCTCTaGAGCTGCCACCTCTATGGAGACCCTGGACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: EQIRPLGLSVSL*SCHLYGDPGLR Trigger: CCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAACACTGAGACCCAAGGGCCTGATTTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS CCA 72 bp | GGACAGAGACAGCAGTCCACGGCTGGGAAGCTCATCTaGAGATGGAGGAACCCGCAGAGTCTCGTTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GQRQQSTAGKLI*RWRNPQSLVED Trigger: ATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCGTGGACTGCTGTCTCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS CAA 72 bp | AAAATGGGCGTGATGGTGCCTCTGGGAACGCGCTTCTaGGAACCAGTCCCCTGTCAGGATCTTCAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KMGVMVPLGTRF*EPVPCQDLQLP Trigger: TGGCAGCTGAAGATCCTGACAGGGGACTGGTTCCAAGAAGCGCGTTCCCAGAGGCACCATCACGCCCATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CAA 90 bp | CACATTCCTGGTCCTGGGGCTCCTCCTCCTGACCTTCGGAAGCCTTaGAGGGTACATATGGTGAGAACAAATCAGGCCCTTGGGTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HIPGPGAPPPDLRKP*RVHMVRTNQALGSQ Trigger: CTGAGACCCAAGGGCCTGATTTGTTCTCACCATATGTACCCTCAAAGGCTTCCGAAGGTCAGGAGGAGGAGCCCCAGGACCAGGAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS CCA 72 bp | TGTTTCTCTCTGGAGCTGCCACCTCTATGGAGACCCTaGACTCCGGCTCTCCTTCAATGGTGTTTTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: CFSLELPPLWRP*TPALLQWCFPQ Trigger: CTGGGGAAAACACCATTGAAGGAGAGCCGGAGTCCAGGGTCTCCATAGAGGTGGCAGCTCCAGAGAGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CAA 72 bp | GGTCCTGGGGCTCCTCCTCCTGACCTTCGGAAGCCTTaGAGGGTACATATGGTGAGAACAAATCAGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GPGAPPPDLRKP*RVHMVRTNQAL Trigger: AAGGGCCTGATTTGTTCTCACCATATGTACCCTCAAAGGCTTCCGAAGGTCAGGAGGAGGAGCCCCAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS CAA 90 bp | CGGCTGGGAAGCTCATCTGGAGATGGAGGAACCCGCAGAGTCTCGTaGAAGATCGGGTTCAGATTCCGTTTCTTCACTGACGTCTTACGC | + |
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Preference number: 6 (lower is better) Translates to: RLGSSSGDGGTRRVS*KIGFRFRFFTDVLR Trigger: GCGTAAGACGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCTTCCCAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS TCA 72 bp | GATCAGCCTGCTGGACAGAGTGCCGCAGAGTCTCGTTaGAGATCGGGTTCAGATTCCGTTTCTTCACTGACG | + |
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Preference number: 6 (lower is better) Translates to: DQPAGQSAAESR*RSGSDSVSSLT Trigger: CGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGCACTCTGTCCAGCAGGCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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| CDS TCA 72 bp | GCTCATCTGGAGATGGAGGAACCCGCAGAGTCTCGTTaGAGATCGGGTTCAGATTCCGTTTCTTCACTGACG | + |
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Preference number: 6 (lower is better) Translates to: AHLEMEEPAESR*RSGSDSVSSLT Trigger: CGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS CCA 72 bp | GCATTGAATGTAAGTGTCCAGGGATCCTGGTCGCAGTaGTACCAGGCTCTGAGCTTCCTTTACCCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: ALNVSVQGSWSQ*YQALSFLYPEV Trigger: CACTTCTGGGTAAAGGAAGCTCAGAGCCTGGTACCACTGCGACCAGGATCCCTGGACACTTACATTCAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS TCA 72 bp | CTCGTTGAAGATCGGGTTCAGATTCCGTTTCTTCACTaGCGTCTTACGCTTGCTCTGCTTATCCGGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LVEDRVQIPFLH*RLTLALLIREE Trigger: CTCCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CAA 72 bp | AGCTCATCTGGAGATGGAGGAACCCGCAGAGTCTCGTaGAAGATCGGGTTCAGATTCCGTTTCTTCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: SSSGDGGTRRVS*KIGFRFRFFTD Trigger: GTCAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGACTCTGCGGGTTCCTCCATCTCCAGATGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105908.10 |
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| CDS GCA 72 bp | GGTTCAGATTCCGTTTCTTCACTGACGTCTTACGCTTaGTCTGCTTATCCGGGAGGAGGTAGCTTTTCACGT | + |
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Preference number: 6 (lower is better) Translates to: GSDSVSSLTSYA*SAYPGGGSFSR Trigger: ACGTGAAAAGCTACCTCCTCCCGGATAAGCAGAGCAAGCGTAAGACGTCAGTGAAGAAACGGAATCTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030674.8 ENSMUST00000105908.10 |
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| CDS CCA 72 bp | TTTGAGGGTACATATGGTGAGAACAAATCAGGCCCTTaGGTCTCAGTGTTTCTCTCTGGAGCTGCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: FEGTYGENKSGP*VSVFLSGAATS Trigger: AGAGGTGGCAGCTCCAGAGAGAAACACTGAGACCCAAGGGCCTGATTTGTTCTCACCATATGTACCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030674.8 |
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