Pregenerated sensors for SYT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062542Ensembl transcript IDs: ENSMUST00000073459.12, ENSMUST00000130414.8, ENSMUST00000137663.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGTGGGACTCTGCCATGTGCATGGGAAGGGACAGTGAGTTTGCTATaGACTGACCTGCCTTGCATGAGACTTTTTCCAGGCTGGCTTAGC | + |
Preference number: 1 (lower is better) Translates to: SGTLPCAWEGTVSLL*TDLPCMRLFPGWLS Trigger: GCTAAGCCAGCCTGGAAAAAGTCTCATGCAAGGCAGGTCAGTTCATAGCAAACTCACTGTCCCTTCCCATGCACATGGCAGAGTCCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | GAGGTGGAAAAGAGCCTCTTTCTGTGGCTGCCCAAGTCTATACCCTaGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGA | + |
Preference number: 1 (lower is better) Translates to: EVEKSLFLWLPKSIP*AVAYGNSQKAAVSR Trigger: TCTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | AACTGCAACCCAACTCTGGGTTCTGTTACAGAGACTGGAGGGGAATaGAATTGTGGAACAGTGATGCAGGGGGAGGGTCTTCTAGACCCA | + |
Preference number: 1 (lower is better) Translates to: NCNPTLGSVTETGGE*NCGTVMQGEGLLDP Trigger: TGGGTCTAGAAGACCCTCCCCCTGCATCACTGTTCCACAATTCCATTCCCCTCCAGTCTCTGTAACAGAACCCAGAGTTGGGTTGCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 90 bp | CCAACCAAAGGCCATCTTGGCACTCAAGCCACTTACTATGCCACTTaGTCTCTTCCACAGTCCAACTTGGCTTTTGACAGTGAGGGAGGA | + |
Preference number: 1 (lower is better) Translates to: PTKGHLGTQATYYAT*SLPQSNLAFDSEGG Trigger: TCCTCCCTCACTGTCAAAAGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 90 bp | AAAGAGCCTCTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTTaGATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGAAAGCCCAA | + |
Preference number: 1 (lower is better) Translates to: KEPLSVAAQVYTLGC*IWKQPEGSCVKKAQ Trigger: TTGGGCTTTCTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | TTCTGTCCTTCCAGGGCATCCAAATCAAATGACTGCATGTTAGACTaGCCACTGTCAGGACCAGTGTCATGCCCATCCAACCAAAGGCCA | + |
Preference number: 1 (lower is better) Translates to: FCPSRASKSNDCMLD*PLSGPVSCPSNQRP Trigger: TGGCCTTTGGTTGGATGGGCATGACACTGGTCCTGACAGTGGTCAGTCTAACATGCAGTCATTTGATTTGGATGCCCTGGAAGGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | CCCTGTCCTGTTGGCACTTGGCCTTCATACTTTGGTTCTAAATACTaGTATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: PCPVGTWPSYFGSKY*YGGGCLNGRDGQGR Trigger: CCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTATTTAGAACCAAAGTATGAAGGCCAAGTGCCAACAGGACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | ATGAAGAGAGGCTGCTCTCCAGGATGGTTAACTGCAACCCAACTCTaGGTTCTGTTACAGAGACTGGAGGGGAATGGAATTGTGGAACAG | + |
Preference number: 1 (lower is better) Translates to: MKRGCSPGWLTATQL*VLLQRLEGNGIVEQ Trigger: CTGTTCCACAATTCCATTCCCCTCCAGTCTCTGTAACAGAACCCAGAGTTGGGTTGCAGTTAACCATCCTGGAGAGCAGCCTCTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | CTGAGGGAATTCAGATTGATAGCCAGCTTCTGGCCACAGCTGTACTaGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACG | + |
Preference number: 1 (lower is better) Translates to: LREFRLIASFWPQLY*LGKALHTQSHLFTT Trigger: CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTGTGGCCAGAAGCTGGCTATCAATCTGAATTCCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | CATAGGCTGAACTTTGAACATAGGTTCCCTTTGAACCCCTTCAAATaGAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATG | + |
Preference number: 1 (lower is better) Translates to: HRLNFEHRFPLNPFK*SWKEMGVDLGGQGM Trigger: CATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGGGGTTCAAAGGGAACCTATGTTCAAAGTTCAGCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | AGGGAGACCAAACAGAACACAAGAGAACAGAGGCAGAGTTGCAAATaGGCTGAGGGAATTCAGATTGATAGCCAGCTTCTGGCCACAGCT | + |
Preference number: 1 (lower is better) Translates to: RETKQNTREQRQSCK*AEGIQIDSQLLATA Trigger: AGCTGTGGCCAGAAGCTGGCTATCAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCTGTTTGGTCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 90 bp | AAAAGTGGTATGTGTCTGAGGTGGAAAAGAGCCTCTTTCTGTGGCTaGCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGA | + |
Preference number: 1 (lower is better) Translates to: KSGMCLRWKRASFCG*PSLYPGLLHMETAR Trigger: TCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTCAGACACATACCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | AGAGTTGCAAATGAGCTGAGGGAATTCAGATTGATAGCCAGCTTCTaGCCACAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGC | + |
Preference number: 1 (lower is better) Translates to: RVANELREFRLIASF*PQLYWLGKALHTQS Trigger: GCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTGTGGCCAGAAGCTGGCTATCAATCTGAATTCCCTCAGCTCATTTGCAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | CACATCCAATTTGGAAAGAGGGCCAGTTATTGCTGTGGTTACAGCTaGGTATTTCTTCACTGGAGTCATCTGGGTGTTGCTAGGTGGGAA | + |
Preference number: 1 (lower is better) Translates to: HIQFGKRASYCCGYS*VFLHWSHLGVARWE Trigger: TTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 90 bp | TTCTTCACTGGAGTCATCTGGGTGTTGCTAGGTGGGAAAAGTTACTaGAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAA | + |
Preference number: 1 (lower is better) Translates to: FFTGVIWVLLGGKSY*RSLLHGCPTVSLAQ Trigger: TTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 90 bp | TCGGGTGCAACCTACACTGAAAAACAAAGTGAAATGAAGAGAGGCTaGTCTCCAGGATGGTTAACTGCAACCCAACTCTGGGTTCTGTTA | + |
Preference number: 1 (lower is better) Translates to: SGATYTEKQSEMKRG*SPGWLTATQLWVLL Trigger: TAACAGAACCCAGAGTTGGGTTGCAGTTAACCATCCTGGAGAGCAGCCTCTCTTCATTTCACTTTGTTTTTCAGTGTAGGTTGCACCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | AGCTTCTCTAGAGCATATCACCTTGGGCCACCTGAAGAAAATAGATaGACCCTTCAGATTCACCACATCCAATTTGGAAAGAGGGCCAGT | + |
Preference number: 1 (lower is better) Translates to: SFSRAYHLGPPEENR*TLQIHHIQFGKRAS Trigger: ACTGGCCCTCTTTCCAAATTGGATGTGGTGAATCTGAAGGGTTCATCTATTTTCTTCAGGTGGCCCAAGGTGATATGCTCTAGAGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | TCAGATTCACCACATCCAATTTGGAAAGAGGGCCAGTTATTGCTGTaGTTACAGCTGAGTATTTCTTCACTGGAGTCATCTGGGTGTTGC | + |
Preference number: 1 (lower is better) Translates to: SDSPHPIWKEGQLLL*LQLSISSLESSGCC Trigger: GCAACACCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGAATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | TACACTGAAAAACAAAGTGAAATGAAGAGAGGCTGCTCTCCAGGATaGTTAACTGCAACCCAACTCTGGGTTCTGTTACAGAGACTGGAG | + |
Preference number: 1 (lower is better) Translates to: YTEKQSEMKRGCSPG*LTATQLWVLLQRLE Trigger: CTCCAGTCTCTGTAACAGAACCCAGAGTTGGGTTGCAGTTAACCATCCTGGAGAGCAGCCTCTCTTCATTTCACTTTGTTTTTCAGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | GATATATATTTAAATATTCTGTCCTTCCAGGGCATCCAAATCAAATaGCTGCATGTTAGACTGACCACTGTCAGGACCAGTGTCATGCCC | + |
Preference number: 1 (lower is better) Translates to: DIYLNILSFQGIQIK*LHVRLTTVRTSVMP Trigger: GGGCATGACACTGGTCCTGACAGTGGTCAGTCTAACATGCAGTCATTTGATTTGGATGCCCTGGAAGGACAGAATATTTAAATATATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | GGCCTTCATACTTTGGTTCTAAATACTGATATGGTGGCGGATGTCTaGATGGAAGGGATGGGCAAGGAAGGTGTGTTTTTCTCATTTTAT | + |
Preference number: 1 (lower is better) Translates to: GLHTLVLNTDMVADV*MEGMGKEGVFFSFY Trigger: ATAAAATGAGAAAAACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTATTTAGAACCAAAGTATGAAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 90 bp | GTTATTGCTGTGGTTACAGCTGAGTATTTCTTCACTGGAGTCATCTaGGTGTTGCTAGGTGGGAAAAGTTACTGCAGATCTTTGTTACAT | + |
Preference number: 1 (lower is better) Translates to: VIAVVTAEYFFTGVI*VLLGGKSYCRSLLH Trigger: ATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 90 bp | CAAGAAAGCCCAAAAGCTGTGCCTTTTTCCAGTGTCATCTCTCAGTaGTCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTAT | + |
Preference number: 1 (lower is better) Translates to: QESPKAVPFSSVISQ*SYLITHTSVSRKDY Trigger: ATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATGACACTGGAAAAAGGCACAGCTTTTGGGCTTTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | CCTTCAAATGAAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATGCCTGACCTGCCTTGCATaGGACTTTTTCCAGGCTGGC | + |
Preference number: 2 (lower is better) Translates to: PSNEVGRRWEWIWEARECLTCLA*DFFQAG Trigger: GCCAGCCTGGAAAAAGTCTCATGCAAGGCAGGTCAG...GCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | CCAGGAGGATGCTGGGTAATGGATGAGCTACCCTGGGGAGAGCCCTaGGCCTTCATTCTTGTAGGTATTTCCATTCCCCAAGTGCTGCAA | + |
Preference number: 2 (lower is better) Translates to: PGGCWVMDELPWGEP*AFILVGISIPQVLQ Trigger: TTGCAGCACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAAGGGCTCTCCCCAGGGTAGCTCATCCATTACCCAGCATCCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTGCTGCTAGCTCAAGGTaGGGAGATCCTGAGGTGGGA | + |
Preference number: 2 (lower is better) Translates to: ILIWWRMSEWKGWARKVCAASSR*GDPEVG Trigger: TCCCACCTCAGGATCTCCTCACCTTGAGCTAGCAGC...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGAGTGGATCTGGTCGATaGTCTCGGGAGGGACGTCGA | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTSGSGR*SREGRR Trigger: TCGACGTCCCTCCCGAGAGCATCGACCAGATCCACT...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | GTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGCACGGTCATAGTCCATaGCGGCTATGGACAAGTGGA | + |
Preference number: 2 (lower is better) Translates to: VYTLGCCIWKQPEGSCVKHGHSP*RLWTSG Trigger: TCCACTTGTCCATAGCCGTCATGGACTATGACCGTG...CTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | CTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCACTTGGCACACGCCAATaGCCTCATTGTGACCTACAC | + |
Preference number: 2 (lower is better) Translates to: LSVAAQVYTLGCCIWKQPLGTRQ*PHCDLH Trigger: GTGTAGGTCACAATGAGGTCATTGGCGTGTGCCAAG...TGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | AGATTATTCCTGGATGCATATTCCACTGGGAGGCAAGTGTCCCTAACAAAGATGCACTCCAGTGGTCTCTaGCCAGCCGCTCAGCCTCGT | + |
Preference number: 2 (lower is better) Translates to: RLFLDAYSTGRQVSLTKMHSSGL*PAAQPR Trigger: ACGAGGCTGAGCGGCTGGGCAGAGACCACTGGAGTG...CATCTTTGTTAGGGACACTTGCCTCCCAGTGGAATATGCATCCAGGAATAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTAGATGGGAGTGGATCTaGGAGGCCAGGGAATGCACT | + |
Preference number: 2 (lower is better) Translates to: ILIWWRMSEWKGWARKVCRWEWI*EARECT Trigger: AGTGCATTCCCTGGCCTCCCAGATCCACTCCCATCT...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGGAAGTTGGAAGGAGATaGGAGTGGATCTGGGAGGCC | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTEVGRR*EWIWEA Trigger: GGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTC...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | AAAAGAGCCTCTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTaGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGAAAGCCCA | + |
Preference number: 2 (lower is better) Translates to: KRASFCGCPSLYPGL*HMETARRQLCQESP Trigger: TGGGCTTTCTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGGACTGCATGTTAGACTaGCCACTGTCAGGACCAGTG | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTDCMLD*PLSGPV Trigger: CACTGGTCCTGACAGTGGTCAGTCTAACATGCAGTC...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCGTCCGACTGTGTCCTTaGCACAAGCAGTCTTCTTCT | + |
Preference number: 2 (lower is better) Translates to: QVYTLGCCIWKQPEGSCVVRLCP*HKQSSS Trigger: AGAAGAAGACTGCTTGTGCCAAGGACACAGTCGGAC...GACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | AGAGGGCCAGTTATTGCTGTGGTTACAGCTGAGTATTTCTTCACTGGAGTCATCAGCATCTCACTCCAGTaGTCTCTGCCCAGCCGCTCA | + |
Preference number: 2 (lower is better) Translates to: RGPVIAVVTAEYFFTGVISISLQ*SLPSRS Trigger: TGAGCGGCTGGGCAGAGACCACTGGAGTGAGATGCT...GATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR CAA 90 bp | GGTGGGAACAACAGGCTACCCCAGGATCTCCAACCTGAGCTCCCATaGCCAAGGACATGTCAAAGCTTAATAAGATGGCTGCCTGATAAT | + |
Preference number: 2 (lower is better) Translates to: GGNNRLPQDLQPELP*PRTCQSLIRWLPDN Trigger: ATTATCAGGCAGCCATCTTATTAAGCTTTGACATGTCCTTGGCAATGGGAGCTCAGGTTGGAGATCCTGGGGTAGCCTGTTGTTCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | TCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAGTCTTCTTCGCCTGAATAAGGTGAGGAGATCCTaGGGTGGGAACAACAGGCTA | + |
Preference number: 2 (lower is better) Translates to: SPHTKPSVYHVGSLLRLNKVRRS*GGNNRL Trigger: TAGCCTGTTGTTCCCACCTCAGGATCTCCTCACCTT...ATTCAGGCGAAGAAGACTACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | TGGTATGTGTCTGAGGTGGAAAAGAGCCTCTTTCTGTGGCTGCCCAAGTCTATAGCCGTCACACATCAGTaGGACTTTCACGTAGGGATC | + |
Preference number: 2 (lower is better) Translates to: WYVSEVEKSLFLWLPKSIAVTHQ*DFHVGI Trigger: GATCCCTACGTGAAAGTCTCACTGATGTGTGACGGC...TATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTCAGACACATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | CCTTCAAATGAAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATGCTCAAGCCACTTACTATaGCACTTGCTCTCTTCCACA | + |
Preference number: 2 (lower is better) Translates to: PSNEVGRRWEWIWEARECSSHLL*HLLSST Trigger: TGTGGAAGAGAGCAAGTGGCATAGTAAGTGGCTTGA...GCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | ACCAAAGGTCTCCACCCTTTTAAGACACGACAAGATCTGGCGTTGGCAGTAGGAACTGGTCCAGGAGGATaGTGGGTAATGGATGAGCTA | + |
Preference number: 2 (lower is better) Translates to: TKGLHPFKTRQDLALAVGTGPGG*WVMDEL Trigger: TAGCTCATCCATTACCCAGCATCCTCCTGGACCAGT...TCCTACTGCCAACGCCAGATCTTGTCGTGTCTTAAAAGGGTGGAGACCTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | CTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAAGCAGTCTTTTCTCCATCAGAGAGTaGCAGTGTGCGATGGGCTTC | + |
Preference number: 2 (lower is better) Translates to: LQIFVTWLSDCVLGTSSLFSIRE*QCAMGF Trigger: GAAGCCCATCGCACACTGGCACTCTCTGATGGAGAA...AAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | ACAAGCAGTCTTCTTCTCCATAGTCATCGTTTCTCCATCAGAGAGTGCCAGTGTATGGACAAGTGGATCTaGTCGATGCTCTCGGGAGGG | + |
Preference number: 2 (lower is better) Translates to: TSSLLLHSHRFSIRECQCMDKWI*SMLSGG Trigger: CCCTCCCGAGAGCATCGACCAGATCCACTTGTCCAT...ACACTGGCACTCTCTGATGGAGAAACGATGACTATGGAGAAGAAGACTGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTACCTGAAGAAAATAGATaGACCCTTCAGATTCACCAC | + |
Preference number: 2 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLPEENR*TLQIHH Trigger: GTGGTGAATCTGAAGGGTTCATCTATTTTCTTCAGG...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTAGGTGGAATTATTCTCTaGAGACAGTCATTAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLGGIIL*RQSLAH Trigger: GTGAGCTAATGACTGTCTTCAGAGAATAATTCCACC...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTATCACCACATCCAATTTaGAAAGAGGGCCAGTTATTG | + |
Preference number: 2 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLSPHPI*KEGQLL Trigger: CAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGA...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTGAGACTGGAGGGGAATaGAATTGTGGAACAGTGATG | + |
Preference number: 2 (lower is better) Translates to: ILIWWRMSEWKGWARKVCETGGE*NCGTVM Trigger: CATCACTGTTCCACAATTCCATTCCCCTCCAGTCTC...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR TCA 90 bp | GGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGACAGGTAGTAAAGTTTaGTTTGAAATCTGCTGCCTA | + |
Preference number: 2 (lower is better) Translates to: GCPSLYPGLLHMETARRQTGSKV*FEICCL Trigger: TAGGCAGCAGATTTCAAATCAAACTTTACTACCTGT...CTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAGAGTTTGCTATGAACTaGCCTGCCTTGCATGAGACT | + |
Preference number: 2 (lower is better) Translates to: YWLGKALHTQSHLFTTWVEFAMN*PALHET Trigger: AGTCTCATGCAAGGCAGGTCAGTTCATAGCAAACTC...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGAAAGTGGTATGTGTCTaGGGTGGAAAAGAGCCTCTT | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTKVVCV*GGKEPL Trigger: AAGAGGCTCTTTTCCACCTCAGACACATACCACTTT...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | AGAACACAAGAGAACAGAGGCAGAGTTGCAAATGAGCTGAGGGAATTCAGATTGAAGGTGAGGAGATCCTaGGGTGGGAACAACAGGCTA | + |
Preference number: 2 (lower is better) Translates to: RTQENRGRVANELREFRLKVRRS*GGNNRL Trigger: TAGCCTGTTGTTCCCACCTCAGGATCTCCTCACCTT...CAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CCTTCAAATGAAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATGCAGGAAAGATTATTCCTaGATGCATATTCCACTGGGA | + |
Preference number: 2 (lower is better) Translates to: PSNEVGRRWEWIWEARECRKDYS*MHIPLG Trigger: TCCCAGTGGAATATGCATCCAGGAATAATCTTTCCT...GCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | TCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAGTCTTCTTCGCCTGAATCCCAAGTCTATACCCTaGGCTGTTGCATATGGAAAC | + |
Preference number: 2 (lower is better) Translates to: SPHTKPSVYHVGSLLRLNPKSIP*AVAYGN Trigger: GTTTCCATATGCAACAGCCCAGGGTATAGACTTGGG...ATTCAGGCGAAGAAGACTACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATGAAGTTGGAAGGAGATaGGAGTGGATCTGGGAGGCC | + |
Preference number: 2 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHEVGRR*EWIWEA Trigger: GGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTC...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGTCCTGTTGGCACTTaGCCTTCATACTTTGGTTCT | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTCPVGT*PSYFGS Trigger: AGAACCAAAGTATGAAGGCCAAGTGCCAACAGGACA...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | GGTGTTGCTAGGTGGGAAAAGTTACTGCAGATCTTTGTTACATGGTaGTCCGACTGTGTCCTTGGCACAAGCAGTCTTCTTCTCCATAGT | + |
Preference number: 2 (lower is better) Translates to: GVARWEKLLQIFVTW*SDCVLGTSSLLLHS Trigger: ACTATGGAGAAGAAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
||
3UTR-3UTR TCA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAAGGCAGAGTTGCAAATaGGCTGAGGGAATTCAGATT | + |
Preference number: 2 (lower is better) Translates to: YWLGKALHTQSHLFTTWVRQSCK*AEGIQI Trigger: AATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCT...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTATCTTCTTCGCCTGAATaGCCCCACAAAGCTATCTTT | + |
Preference number: 2 (lower is better) Translates to: YWLGKALHTQSHLFTTWVSSSPE*PHKAIF Trigger: AAAGATAGCTTTGTGGGGGCATTCAGGCGAAGAAGA...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CCTTCAAATGAAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATGCAGCCTAGTATTTTCTTaGGCCATTACTTGGAAAACT | + |
Preference number: 2 (lower is better) Translates to: PSNEVGRRWEWIWEARECSLVFS*AITWKT Trigger: AGTTTTCCAAGTAATGGCCCAAGAAAATACTAGGCT...GCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATCTGGGCTGTTGCATATaGAAACAGCCAGAAGGCAGC | + |
Preference number: 2 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHLGCCI*KQPEGS Trigger: GCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAG...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CAA 90 bp | AACCCTTCAGATTCACCACATCCAATTTGGAAAGAGGGCCAGTTATaGCTGTGGTTACAGCTGAGTATTTCTTCACTGGAGTCATCTGGG | + |
Preference number: 2 (lower is better) Translates to: NPSDSPHPIWKEGQL*LWLQLSISSLESSG Trigger: CCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGAATCTGAAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | GCCACTTACTATGCCACTTGCTCTCTTCCACAGTCCAACTTGGCTTTTGACAGTCCTGAAGAAAATAGATaGACCCTTCAGATTCACCAC | + |
Preference number: 2 (lower is better) Translates to: ATYYATCSLPQSNLAFDSPEENR*TLQIHH Trigger: GTGGTGAATCTGAAGGGTTCATCTATTTTCTTCAGG...ACTGTCAAAAGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | AGATTATTCCTGGATGCATATTCCACTGGGAGGCAAGTGTCCCTAACAAAGATGACAGTGAGTTTGCTATaGACTGACCTGCCTTGCATG | + |
Preference number: 2 (lower is better) Translates to: RLFLDAYSTGRQVSLTKMTVSLL*TDLPCM Trigger: CATGCAAGGCAGGTCAGTTCATAGCAAACTCACTGT...CATCTTTGTTAGGGACACTTGCCTCCCAGTGGAATATGCATCCAGGAATAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAAAAGCCCAAAAGCTGTaGCTTTTTCCAGTGTCATCT | + |
Preference number: 2 (lower is better) Translates to: YWLGKALHTQSHLFTTWVKAQKL*LFPVSS Trigger: AGATGACACTGGAAAAAGGCACAGCTTTTGGGCTTT...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAAGCAGTCTTCAGATCTTTGTTACATaGTTGTCCGACTGTGTCCTT | + |
Preference number: 2 (lower is better) Translates to: LQIFVTWLSDCVLGTSSLQIFVT*LSDCVL Trigger: AAGGACACAGTCGGACAACCATGTAACAAAGATCTG...AAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | TGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAAGCAGTCTTCGGCCAGTTATTGCTGTaGTTACAGCTGAGTATTTCT | + |
Preference number: 2 (lower is better) Translates to: CRSLLHGCPTVSLAQAVFGQLLL*LQLSIS Trigger: AGAAATACTCAGCTGTAACCACAGCAATAACTGGCC...GAAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAAGCAGTCTTTCACCACATCCAATTTaGAAAGAGGGCCAGTTATTG | + |
Preference number: 2 (lower is better) Translates to: LQIFVTWLSDCVLGTSSLSPHPI*KEGQLL Trigger: CAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGA...AAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGAGACTTTTTCCAGGCTaGCTTAGCCTAGTATTTTCT | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTRLFPG*LSLVFS Trigger: AGAAAATACTAGGCTAAGCCAGCCTGGAAAAAGTCT...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTTGTACTAGGTGTATATaGAAGCCAGAACTTTCCAAC | + |
Preference number: 2 (lower is better) Translates to: ILIWWRMSEWKGWARKVCCTRCI*KPELSN Trigger: GTTGGAAAGTTCTGGCTTCCATATACACCTAGTACA...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | GCTGTGGTTACAGCTGAGTATTTCTTCACTGGAGTCATCTGGGTGTaGCTAGGTGGGAAAAGTTACTGCAGATCTTTGTTACATGGTTGT | + |
Preference number: 2 (lower is better) Translates to: AVVTAEYFFTGVIWV*LGGKSYCRSLLHGC Trigger: ACAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | CACATCTGCCTGGATCTAGTGACAATATTTCTGCTCCCTGTCCTGTaGGCACTTGGCCTTCATACTTTGGTTCTAAATACTGATATGGTG | + |
Preference number: 2 (lower is better) Translates to: HICLDLVTIFLLPVL*ALGLHTLVLNTDMV Trigger: CACCATATCAGTATTTAGAACCAAAGTATGAAGGCCAAGTGCCAACAGGACAGGGAGCAGAAATATTGTCACTAGATCCAGGCAGATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | TTGGCCTTCATTCTTGTAGGTATTTCCATTCCCCAAGTGCTGCAAAAGTGGTATGAGTTTGCTATGAACTaGCCTGCCTTGCATGAGACT | + |
Preference number: 2 (lower is better) Translates to: LAFILVGISIPQVLQKWYEFAMN*PALHET Trigger: AGTCTCATGCAAGGCAGGTCAGTTCATAGCAAACTC...ATACCACTTTTGCAGCACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTATGCCTGATAATCTTTTaGTGGAGCCATTCTAGTTTC | + |
Preference number: 2 (lower is better) Translates to: YWLGKALHTQSHLFTTWVCLIIF*WSHSSF Trigger: GAAACTAGAATGGCTCCAGCAAAAGATTATCAGGCA...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTATCTTGGGCCATTACTTaGAAAACTGGAACACTTTCT | + |
Preference number: 2 (lower is better) Translates to: YWLGKALHTQSHLFTTWVSWAIT*KTGTLS Trigger: AGAAAGTGTTCCAGTTTTCCAAGTAATGGCCCAAGA...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | AAAAGTTACTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTaGGCACAAGCAGTCTTCTTCTCCATAGTCATCGTTTCTCCATCA | + |
Preference number: 2 (lower is better) Translates to: KSYCRSLLHGCPTVS*AQAVFFSIVIVSPS Trigger: TGATGGAGAAACGATGACTATGGAGAAGAAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | TTGGCCTTCATTCTTGTAGGTATTTCCATTCCCCAAGTGCTGCAAAAGTGGTATTGCTGTGGTTACAGCTaGGTATTTCTTCACTGGAGT | + |
Preference number: 2 (lower is better) Translates to: LAFILVGISIPQVLQKWYCCGYS*VFLHWS Trigger: ACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCA...ATACCACTTTTGCAGCACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATAAAGTGGTATGTGTCTaGGGTGGAAAAGAGCCTCTT | + |
Preference number: 2 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHKVVCV*GGKEPL Trigger: AAGAGGCTCTTTTCCACCTCAGACACATACCACTTT...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR GCA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATTCAAGCCACTTACTATaGCACTTGCTCTCTTCCACA | + |
Preference number: 2 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHSSHLL*HLLSST Trigger: TGTGGAAGAGAGCAAGTGGCATAGTAAGTGGCTTGA...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTAGTCCGACTGTGTCCTTaGCACAAGCAGTCTTCTTCT | + |
Preference number: 2 (lower is better) Translates to: HLSVILSHNTHFCVQERLVRLCP*HKQSSS Trigger: AGAAGAAGACTGCTTGTGCCAAGGACACAGTCGGAC...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | TCTGCTGTAATGCTGCATCCCTCGGGTGCAACCTACACTGAAAAACAAAGTGAAGAACACTTTCTGGGGTaGAATTATTCTCTGAAGACA | + |
Preference number: 2 (lower is better) Translates to: SAVMLHPSGATYTEKQSEEHFLG*NYSLKT Trigger: TGTCTTCAGAGAATAATTCCACCCCAGAAAGTGTTC...TTCACTTTGTTTTTCAGTGTAGGTTGCACCCGAGGGATGCAGCATTACAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | TCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCATACTCTGCCATGTGCATaGGAAGGGACAGTGAGTTTG | + |
Preference number: 2 (lower is better) Translates to: SYLITHTSVSRKDYSWMHTLPCA*EGTVSL Trigger: CAAACTCACTGTCCCTTCCCATGCACATGGCAGAGT...ATGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | TCTGCTGTAATGCTGCATCCCTCGGGTGCAACCTACACTGAAAAACAAAGTGAAAGGAAAGATTATTCCTaGATGCATATTCCACTGGGA | + |
Preference number: 2 (lower is better) Translates to: SAVMLHPSGATYTEKQSERKDYS*MHIPLG Trigger: TCCCAGTGGAATATGCATCCAGGAATAATCTTTCCT...TTCACTTTGTTTTTCAGTGTAGGTTGCACCCGAGGGATGCAGCATTACAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTCTGATAATCTTTTGCTaGAGCCATTCTAGTTTCTTT | + |
Preference number: 2 (lower is better) Translates to: ILIWWRMSEWKGWARKVCLIIFC*SHSSFF Trigger: AAAGAAACTAGAATGGCTCCAGCAAAAGATTATCAG...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGCAAAGCTTAATAAGATaGCTGCCTGATAATCTTTTG | + |
Preference number: 2 (lower is better) Translates to: QLYWLGKALHTQSHLFTTQSLIR*LPDNLL Trigger: CAAAAGATTATCAGGCAGCCATCTTATTAAGCTTTG...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 90 bp | CACCTGAAGAAAATAGATGAACCCTTCAGATTCACCACATCCAATTaGGAAAGAGGGCCAGTTATTGCTGTGGTTACAGCTGAGTATTTC | + |
Preference number: 2 (lower is better) Translates to: HLKKIDEPFRFTTSN*ERGPVIAVVTAEYF Trigger: GAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGAATCTGAAGGGTTCATCTATTTTCTTCAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR TCA 90 bp | TTCCAGTGTCATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGGTGGAATTATTCTCTaGAGACAGTCATTAGCTCAC | + |
Preference number: 2 (lower is better) Translates to: FQCHLSVILSHNTHFCVQGGIIL*RQSLAH Trigger: GTGAGCTAATGACTGTCTTCAGAGAATAATTCCACC...CTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATGACACTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | ACATCCAATTTGGAAAGAGGGCCAGTTATTGCTGTGGTTACAGCTGAGTATTTCGGCCAGTTATTGCTGTaGTTACAGCTGAGTATTTCT | + |
Preference number: 2 (lower is better) Translates to: TSNLERGPVIAVVTAEYFGQLLL*LQLSIS Trigger: AGAAATACTCAGCTGTAACCACAGCAATAACTGGCC...GAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CCA 90 bp | TCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAGTCTTCTTCGCCTGAATCAAAGCTTAATAAGATaGCTGCCTGATAATCTTTTG | + |
Preference number: 2 (lower is better) Translates to: SPHTKPSVYHVGSLLRLNQSLIR*LPDNLL Trigger: CAAAAGATTATCAGGCAGCCATCTTATTAAGCTTTG...ATTCAGGCGAAGAAGACTACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR TCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATGCTGTGGTTACAGCTaGGTATTTCTTCACTGGAGT | + |
Preference number: 2 (lower is better) Translates to: HLSVILSHNTHFCVQERLCCGYS*VFLHWS Trigger: ACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCA...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | TTGGCCTTCATTCTTGTAGGTATTTCCATTCCCCAAGTGCTGCAAAAGTGGTATTCTTGGGCCATTACTTaGAAAACTGGAACACTTTCT | + |
Preference number: 2 (lower is better) Translates to: LAFILVGISIPQVLQKWYSWAIT*KTGTLS Trigger: AGAAAGTGTTCCAGTTTTCCAAGTAATGGCCCAAGA...ATACCACTTTTGCAGCACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTACATTACTTGGAAAACTaGAACACTTTCTGGGGTGGA | + |
Preference number: 2 (lower is better) Translates to: HLSVILSHNTHFCVQERLHYLEN*NTFWGG Trigger: TCCACCCCAGAAAGTGTTCCAGTTTTCCAAGTAATG...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | ATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCAGAACACTTTCTGGGGTaGAATTATTCTCTGAAGACA | + |
Preference number: 2 (lower is better) Translates to: ILSHNTHFCVQERLFLDAEHFLG*NYSLKT Trigger: TGTCTTCAGAGAATAATTCCACCCCAGAAAGTGTTC...TGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CCA 90 bp | ATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCAAGACTTTTTCCAGGCTaGCTTAGCCTAGTATTTTCT | + |
Preference number: 2 (lower is better) Translates to: ILSHNTHFCVQERLFLDARLFPG*LSLVFS Trigger: AGAAAATACTAGGCTAAGCCAGCCTGGAAAAAGTCT...TGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR TCA 72 bp | GCAGTAGACTGGTCCAGGAGGATGCTGGGTAATGGATaGGCTACCCTGGGGAGAGCCCTTGGCCTTCATTCT | + |
Preference number: 3 (lower is better) Translates to: AVDWSRRMLGNG*ATLGRALGLHS Trigger: AGAATGAAGGCCAAGGGCTCTCCCCAGGGTAGCTCATCCATTACCCAGCATCCTCCTGGACCAGTCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | GGTCCAGGAGGATGCTGGGTAATGGATGAGCTACCCTaGGGAGAGCCCTTGGCCTTCATTCTTGTAGGTATT | + |
Preference number: 3 (lower is better) Translates to: GPGGCWVMDELP*GEPLAFILVGI Trigger: AATACCTACAAGAATGAAGGCCAAGGGCTCTCCCCAGGGTAGCTCATCCATTACCCAGCATCCTCCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR TCA 72 bp | TTTGGTTTCATTTCCTGGAGGCAGACACAGGAAGGATaGGGTGCACAACTGGCAGTAGACTGGTCCAGGAGG | + |
Preference number: 3 (lower is better) Translates to: FGFISWRQTQEG*GAQLAVDWSRR Trigger: CCTCCTGGACCAGTCTACTGCCAGTTGTGCACCTCATCCTTCCTGTGTCTGCCTCCAGGAAATGAAACCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR GCA 72 bp | CTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTTaGATATGGAAACAGCCAGAAGGCAGCTGTGTCAAG | + |
Preference number: 3 (lower is better) Translates to: LSVAAQVYTLGC*IWKQPEGSCVK Trigger: CTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTaGCACTCAAGCCACTTACTATGCCACTTGCTCTCT | + |
Preference number: 3 (lower is better) Translates to: GPVSCPSNQRPS*HSSHLLCHLLS Trigger: AGAGAGCAAGTGGCATAGTAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | AAGAGCCTCTTTCTGTGGCTGCCCAAGTCTATACCCTaGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCT | + |
Preference number: 3 (lower is better) Translates to: KSLFLWLPKSIP*AVAYGNSQKAA Trigger: AGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CAA 90 bp | GGCACTCAAGCCACTTACTATGCCACTTGCTCTCTTCCACAGTCCAACTTGGCTTGTCCGACTGTGTCCTaGGCACAAGCAGTCTTCTTC | + |
Preference number: 3 (lower is better) Translates to: GTQATYYATCSLPQSNLACPTVS*AQAVFF Trigger: GAAGAAGACTGCTTGTGCCAAGGACACAGTCGGACA...AGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGCTTGAGTGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CAA 90 bp | CTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCATGTCCGACTGTGTCCTaGGCACAAGCAGTCTTCTTC | + |
Preference number: 3 (lower is better) Translates to: LSVAAQVYTLGCCIWKQPCPTVS*AQAVFF Trigger: GAAGAAGACTGCTTGTGCCAAGGACACAGTCGGACA...TGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CAA 90 bp | GGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTAGAGCATATCACCTaGGGCCACCTGAAGAAAATA | + |
Preference number: 3 (lower is better) Translates to: GCPSLYPGLLHMETARRQLEHIT*GHLKKI Trigger: TATTTTCTTCAGGTGGCCCAAGGTGATATGCTCTAG...CTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 72 bp | CTGCCATGTGCATGGGAAGGGACAGTGAGTTTGCTATaGACTGACCTGCCTTGCATGAGACTTTTTCCAGGC | + |
Preference number: 3 (lower is better) Translates to: LPCAWEGTVSLL*TDLPCMRLFPG Trigger: GCCTGGAAAAAGTCTCATGCAAGGCAGGTCAGTTCATAGCAAACTCACTGTCCCTTCCCATGCACATGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | GGCTGCTCTCCAGGATGGTTAACTGCAACCCAACTCTaGGTTCTGTTACAGAGACTGGAGGGGAATGGAATT | + |
Preference number: 3 (lower is better) Translates to: GCSPGWLTATQL*VLLQRLEGNGI Trigger: AATTCCATTCCCCTCCAGTCTCTGTAACAGAACCCAGAGTTGGGTTGCAGTTAACCATCCTGGAGAGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTACTAGAGCATATCACCTaGGGCCACCTGAAGAAAATA | + |
Preference number: 3 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLLEHIT*GHLKKI Trigger: TATTTTCTTCAGGTGGCCCAAGGTGATATGCTCTAG...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR-3UTR CAA 90 bp | TACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGTGGGTACAACCTGAGCTCCCATaGCCAAGGACATGTCAAAGC | + |
Preference number: 3 (lower is better) Translates to: YWLGKALHTQSHLFTTWVQPELP*PRTCQS Trigger: GCTTTGACATGTCCTTGGCAATGGGAGCTCAGGTTG...TACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR TCA 72 bp | TCCAGGGCATCCAAATCAAATGACTGCATGTTAGACTaGCCACTGTCAGGACCAGTGTCATGCCCATCCAAC | + |
Preference number: 3 (lower is better) Translates to: SRASKSNDCMLD*PLSGPVSCPSN Trigger: GTTGGATGGGCATGACACTGGTCCTGACAGTGGTCAGTCTAACATGCAGTCATTTGATTTGGATGCCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 72 bp | ATGTGTCTGAGGTGGAAAAGAGCCTCTTTCTGTGGCTaGCCAAGTCTATACCCTGGGCTGTTGCATATGGAA | + |
Preference number: 3 (lower is better) Translates to: MCLRWKRASFCG*PSLYPGLLHME Trigger: TTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTCAGACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | TGGTATGTGTCTGAGGTGGAAAAGAGCCTCTTTCTGTaGCTGCCCAAGTCTATACCCTGGGCTGTTGCATAT | + |
Preference number: 3 (lower is better) Translates to: WYVSEVEKSLFL*LPKSIPWAVAY Trigger: ATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTCAGACACATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | TTCAGATTGATAGCCAGCTTCTGGCCACAGCTGTACTaGCTAGGTAAAGCTCTCCACACACAAAGCCATCTG | + |
Preference number: 3 (lower is better) Translates to: FRLIASFWPQLY*LGKALHTQSHL Trigger: CAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTGTGGCCAGAAGCTGGCTATCAATCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR CCA 72 bp | AATGAGCTGAGGGAATTCAGATTGATAGCCAGCTTCTaGCCACAGCTGTACTGGCTAGGTAAAGCTCTCCAC | + |
Preference number: 3 (lower is better) Translates to: NELREFRLIASF*PQLYWLGKALH Trigger: GTGGAGAGCTTTACCTAGCCAGTACAGCTGTGGCCAGAAGCTGGCTATCAATCTGAATTCCCTCAGCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR GCA 72 bp | GGAGTCATCTGGGTGTTGCTAGGTGGGAAAAGTTACTaGAGATCTTTGTTACATGGTTGTCCGACTGTGTCC | + |
Preference number: 3 (lower is better) Translates to: GVIWVLLGGKSY*RSLLHGCPTVS Trigger: GGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
3UTR GCA 72 bp | AACCAAAGGCCATCTTGGCACTCAAGCCACTTACTATaGCACTTGCTCTCTTCCACAGTCCAACTTGGCTTT | + |
Preference number: 3 (lower is better) Translates to: NQRPSWHSSHLL*HLLSSTVQLGF Trigger: AAAGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 72 bp | ACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTaGTGTAATGCTGCATCCCTCGGGTGCAACCTACAC | + |
Preference number: 3 (lower is better) Translates to: TRCIWKPELSNI*CNAASLGCNLH Trigger: GTGTAGGTTGCACCCGAGGGATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | GGCCAGTTATTGCTGTGGTTACAGCTGAGTATTTCTTCACTGGAGTCATCTGGGAAAGAGGGCCAGTTATaGCTGTGGTTACAGCTGAGT | + |
Preference number: 3 (lower is better) Translates to: GQLLLWLQLSISSLESSGKEGQL*LWLQLS Trigger: ACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTT...CCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | AGAACACAAGAGAACAGAGGCAGAGTTGCAAATGAGCTGAGGGAATTCAGATTGTGGAGGGGAATGGAATaGTGGAACAGTGATGCAGGG | + |
Preference number: 3 (lower is better) Translates to: RTQENRGRVANELREFRLWRGME*WNSDAG Trigger: CCCTGCATCACTGTTCCACAATTCCATTCCCCTCCA...CAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | TCTGCTGTAATGCTGCATCCCTCGGGTGCAACCTACACTGAAAAACAAAGTGAAATCTTTGTTACATGGTaGTCCGACTGTGTCCTTGGC | + |
Preference number: 3 (lower is better) Translates to: SAVMLHPSGATYTEKQSEIFVTW*SDCVLG Trigger: GCCAAGGACACAGTCGGACAACCATGTAACAAAGAT...TTCACTTTGTTTTTCAGTGTAGGTTGCACCCGAGGGATGCAGCATTACAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 72 bp | AACTTTGAACATAGGTTCCCTTTGAACCCCTTCAAATaGAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGC | + |
Preference number: 3 (lower is better) Translates to: NFEHRFPLNPFK*SWKEMGVDLGG Trigger: GCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGGGGTTCAAAGGGAACCTATGTTCAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 72 bp | GTTGGCACTTGGCCTTCATACTTTGGTTCTAAATACTaGTATGGTGGCGGATGTCTGAATGGAAGGGATGGG | + |
Preference number: 3 (lower is better) Translates to: VGTWPSYFGSKY*YGGGCLNGRDG Trigger: CCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTATTTAGAACCAAAGTATGAAGGCCAAGTGCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | GGGCCATTACTTGGAAAACTGGAACACTTTCTGGGGTGGAATTATTCTCTGAAGAAAGAGGGCCAGTTATaGCTGTGGTTACAGCTGAGT | + |
Preference number: 3 (lower is better) Translates to: GPLLGKLEHFLGWNYSLKKEGQL*LWLQLS Trigger: ACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTT...CTTCAGAGAATAATTCCACCCCAGAAAGTGTTCCAGTTTTCCAAGTAATGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR GCA 72 bp | CACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATaGATATTCCACTGGGAGGCAAGTGTCCCTAACAAA | + |
Preference number: 3 (lower is better) Translates to: HTLLCPGKIIPG*IFHWEASVPNK Trigger: TTTGTTAGGGACACTTGCCTCCCAGTGGAATATGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATATCTTTGTTACATGGTaGTCCGACTGTGTCCTTGGC | + |
Preference number: 3 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHIFVTW*SDCVLG Trigger: GCCAAGGACACAGTCGGACAACCATGTAACAAAGAT...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | TCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAGTCTTCTTCGCCTGAATGGGAATGCACTAAGCTaGAATGAATTAACATTGCCT | + |
Preference number: 3 (lower is better) Translates to: SPHTKPSVYHVGSLLRLNGNALS*NELTLP Trigger: AGGCAATGTTAATTCATTCAAGCTTAGTGCATTCCC...ATTCAGGCGAAGAAGACTACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | CAGCTGTACTGGCTAGGTAAAGCTCTCCACACACAAAGCCATCTGTTTACCACGCTTGGCCTTCATACTTaGGTTCTAAATACTGATATG | + |
Preference number: 3 (lower is better) Translates to: QLYWLGKALHTQSHLFTTLGLHT*VLNTDM Trigger: CATATCAGTATTTAGAACCAAAGTATGAAGGCCAAG...CGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 72 bp | ACTTTGGTTCTAAATACTGATATGGTGGCGGATGTCTaGATGGAAGGGATGGGCAAGGAAGGTGTGTTTTTC | + |
Preference number: 3 (lower is better) Translates to: TLVLNTDMVADV*MEGMGKEGVFF Trigger: GAAAAACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTATTTAGAACCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 72 bp | AAACAGAACACAAGAGAACAGAGGCAGAGTTGCAAATaGGCTGAGGGAATTCAGATTGATAGCCAGCTTCTG | + |
Preference number: 3 (lower is better) Translates to: KQNTREQRQSCK*AEGIQIDSQLL Trigger: CAGAAGCTGGCTATCAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 72 bp | CCACATCCAATTTGGAAAGAGGGCCAGTTATTGCTGTaGTTACAGCTGAGTATTTCTTCACTGGAGTCATCT | + |
Preference number: 3 (lower is better) Translates to: PHPIWKEGQLLL*LQLSISSLESS Trigger: AGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 72 bp | GGCGTTGGCAGTAGGATTTCTTGTACTAGGTGTATATaGAAGCCAGAACTTTCCAACATCTGCTGTAATGCT | + |
Preference number: 3 (lower is better) Translates to: GVGSRISCTRCI*KPELSNICCNA Trigger: AGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTACAAGAAATCCTACTGCCAACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR TCA 72 bp | TTAAATATTCTGTCCTTCCAGGGCATCCAAATCAAATaGCTGCATGTTAGACTGACCACTGTCAGGACCAGT | + |
Preference number: 3 (lower is better) Translates to: LNILSFQGIQIK*LHVRLTTVRTS Trigger: ACTGGTCCTGACAGTGGTCAGTCTAACATGCAGTCATTTGATTTGGATGCCCTGGAAGGACAGAATATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CCA 72 bp | GTATTTCTTCACTGGAGTCATCTGGGTGTTGCTAGGTaGGAAAAGTTACTGCAGATCTTTGTTACATGGTTG | + |
Preference number: 3 (lower is better) Translates to: VFLHWSHLGVAR*EKLLQIFVTWL Trigger: CAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR-3UTR CAA 90 bp | ATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCAAGTTACTGCAGATCTTaGTTACATGGTTGTCCGACT | + |
Preference number: 3 (lower is better) Translates to: ILSHNTHFCVQERLFLDASYCRS*LHGCPT Trigger: AGTCGGACAACCATGTAACAAAGATCTGCAGTAACT...TGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GACGGCTATGGACAAGTGGATCTGGTCGATGCTCTCGGGAGGGACGTCGAAGACGGCCCCCTGGCTGGGTaGAGAGGGGAATGTCGGGGG | + |
Preference number: 4 (lower is better) Translates to: DGYGQVDLVDALGRDVEDGPLAG*RGECRG Trigger: CCCCCGACATTCCCCTCTCCACCCAGCCAGGGGGCC...GTCTTCGACGTCCCTCCCGAGAGCATCGACCAGATCCACTTGTCCATAGCCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
||
CDS-3UTR GCA 90 bp | CCTTCAAATGAAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATGCTCTTGGCAGCTGTCGTaGTCCAGGGCCCCTCGGGCA | + |
Preference number: 4 (lower is better) Translates to: PSNEVGRRWEWIWEARECSWQLS*SRAPRA Trigger: TGCCCGAGGGGCCCTGGAGCACGACAGCTGCCAAGA...GCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GCCACTTACTATGCCACTTGCTCTCTTCCACAGTCCAACTTGGCTTTTGACAGTCGCGGAGCCGGGGTCTaGCACGGTCCCGCAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: ATYYATCSLPQSNLAFDSRGAGV*HGPAGG Trigger: ACCACCTGCGGGACCGTGCCAGACCCCGGCTCCGCG...ACTGTCAAAAGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
CDS-3UTR CCA 90 bp | TCTCCACACACAAAGCCATCTGTTTACCACGTGGGTAGTCTTCTTCGCCTGAATCGCGGAGCCGGGGTCTaGCACGGTCCCGCAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: SPHTKPSVYHVGSLLRLNRGAGV*HGPAGG Trigger: ACCACCTGCGGGACCGTGCCAGACCCCGGCTCCGCG...ATTCAGGCGAAGAAGACTACCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GGCACTCAAGCCACTTACTATGCCACTTGCTCTCTTCCACAGTCCAACTTGGCTTGCACACGGACGGCATaGGCACAGTTCTCCTGGCCC | + |
Preference number: 4 (lower is better) Translates to: GTQATYYATCSLPQSNLACTRTA*AQFSWP Trigger: GGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCA...AGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGCTTGAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
||
CDS-3UTR TCA 90 bp | GGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCCCGCAGGTGGTAGATaGAATCTTGGCAGCTGTCGT | + |
Preference number: 4 (lower is better) Translates to: GCPSLYPGLLHMETARRQPAGGR*NLGSCR Trigger: ACGACAGCTGCCAAGATTTCATCTACCACCTGCGGG...CTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | GGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGATGGTGTTGGCTCTGTaGCTTGTCGCTGCACACGGA | + |
Preference number: 4 (lower is better) Translates to: GCPSLYPGLLHMETARRQMVLAL*LVAAHG Trigger: TCCGTGTGCAGCGACAAGTCACAGAGCCAACACCAT...CTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGGCTCACAGAGATATCTaGGTCGCGGAGCCGGGGTCT | + |
Preference number: 4 (lower is better) Translates to: VYTLGCCIWKQPEGSCVKAHRDI*VAEPGS Trigger: AGACCCCGGCTCCGCGACCCAGATATCTCTGTGAGC...CTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GTGTTGCTAGGTGGGAAAAGTTACTGCAGATCTTTGTTACATGGTTGTCCGACTGGCCCCCTGGCTGGGTaGAGAGGGGAATGTCGGGGG | + |
Preference number: 4 (lower is better) Translates to: VLLGGKSYCRSLLHGCPTGPLAG*RGECRG Trigger: CCCCCGACATTCCCCTCTCCACCCAGCCAGGGGGCC...AGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTAATGGTGTTGGCTCTGTaGCTTGTCGCTGCACACGGA | + |
Preference number: 4 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLMVLAL*LVAAHG Trigger: TCCGTGTGCAGCGACAAGTCACAGAGCCAACACCAT...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTACCGGGTTCGACAGGTTaGGCTGTCTTCGGATTGAGT | + |
Preference number: 4 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLPGSTG*AVFGLS Trigger: ACTCAATCCGAAGACAGCTCAACCTGTCGAACCCGG...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR TCA 90 bp | GGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCACGGTCATAGTCCATaGCGGCTATGGACAAGTGGA | + |
Preference number: 4 (lower is better) Translates to: GCPSLYPGLLHMETARRQHGHSP*RLWTSG Trigger: TCCACTTGTCCATAGCCGTCATGGACTATGACCGTG...CTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR GCA 90 bp | GGAAAAGTTACTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACTCTTGGCAGCTGTCGTaGTCCAGGGCCCCTCGGGCA | + |
Preference number: 4 (lower is better) Translates to: GKVTADLCYMVVRLCPWHSWQLS*SRAPRA Trigger: TGCCCGAGGGGCCCTGGAGCACGACAGCTGCCAAGA...GTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | TGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAAGCAGTCTTCTGCACACGGACGGCATaGGCACAGTTCTCCTGGCCC | + |
Preference number: 4 (lower is better) Translates to: CRSLLHGCPTVSLAQAVFCTRTA*AQFSWP Trigger: GGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCA...GAAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 72 bp | AGGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTaGGCACTCAAGCCACTTACTATGCCACTTGCTCTC | + |
Preference number: 4 (lower is better) Translates to: RTSVMPIQPKAI*ALKPLTMPLAL Trigger: GAGAGCAAGTGGCATAGTAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTGGGCTTCCGAGGATATaGCAGCATCTCACTCCAGTG | + |
Preference number: 4 (lower is better) Translates to: ILIWWRMSEWKGWARKVCGLPRI*QHLTPV Trigger: CACTGGAGTGAGATGCTGTCATATCCTCGGAAGCCC...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR GCA 90 bp | AGAACACAAGAGAACAGAGGCAGAGTTGCAAATGAGCTGAGGGAATTCAGATTGCACTCCAGTGGTCTCTaGCCAGCCGCTCAGCCTCGT | + |
Preference number: 4 (lower is better) Translates to: RTQENRGRVANELREFRLHSSGL*PAAQPR Trigger: ACGAGGCTGAGCGGCTGGGCAGAGACCACTGGAGTG...CAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR GCA 90 bp | CTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCATTCTCCATCAGAGAGTaGCAGTGTGCGATGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: LSVAAQVYTLGCCIWKQPFSIRE*QCAMGF Trigger: GAAGCCCATCGCACACTGGCACTCTCTGATGGAGAA...TGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CCA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATTGGGCACAGTTCTCCTaGCCCCCTGGCTGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHWAQFS*PPGWVE Trigger: CTCCACCCAGCCAGGGGGCCAGGAGAACTGTGCCCA...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR GCA 90 bp | GGAAAAGTTACTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACTCTGTGACTTGTCGCTaGACACGGACGGCATGGGCA | + |
Preference number: 4 (lower is better) Translates to: GKVTADLCYMVVRLCPWHSVTCR*TRTAWA Trigger: TGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGA...GTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR GCA 90 bp | GGAAAAGTTACTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAGTGGATCTGGTCGATaGTCTCGGGAGGGACGTCGA | + |
Preference number: 4 (lower is better) Translates to: GKVTADLCYMVVRLCPWHSGSGR*SREGRR Trigger: TCGACGTCCCTCCCGAGAGCATCGACCAGATCCACT...GTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CCA 90 bp | ATACTGATATGGTGGCGGATGTCTGAATGGAAGGGATGGGCAAGGAAGGTGTGTACGGCTATGGACAAGTaGATCTGGTCGATGCTCTCG | + |
Preference number: 4 (lower is better) Translates to: ILIWWRMSEWKGWARKVCTAMDK*IWSMLS Trigger: CGAGAGCATCGACCAGATCCACTTGTCCATAGCCGT...ACACACCTTCCTTGCCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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3UTR CAA 72 bp | TCTTTCTGTGGCTGCCCAAGTCTATACCCTGGGCTGTaGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAA | + |
Preference number: 4 (lower is better) Translates to: SFCGCPSLYPGL*HMETARRQLCQ Trigger: TTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCCACAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | GGCCAGTTATTGCTGTGGTTACAGCTGAGTATTTCTTCACTGGAGTCATCTGGGCCACATTATCCGAGCTaGTGGTGTTGGCTCTGTGAC | + |
Preference number: 4 (lower is better) Translates to: GQLLLWLQLSISSLESSGPHYPS*WCWLCD Trigger: GTCACAGAGCCAACACCATCAGCTCGGATAATGTGG...CCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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CDS-3UTR GCA 90 bp | GCCACTTACTATGCCACTTGCTCTCTTCCACAGTCCAACTTGGCTTTTGACAGTTCCTCGCTGTTCTCCTaGTCGTTTGTCTCTGTGTCG | + |
Preference number: 4 (lower is better) Translates to: ATYYATCSLPQSNLAFDSSSLFS*SFVSVS Trigger: CGACACAGAGACAAACGAGCAGGAGAACAGCGAGGA...ACTGTCAAAAGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | TCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCATTGGGCACAGTTCTCCTaGCCCCCTGGCTGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: SYLITHTSVSRKDYSWMHWAQFS*PPGWVE Trigger: CTCCACCCAGCCAGGGGGCCAGGAGAACTGTGCCCA...ATGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | CAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCCTTGACATAAGGATCTaGAGTCCCAGAGAAGTCCTT | + |
Preference number: 4 (lower is better) Translates to: QVYTLGCCIWKQPEGSCVLDIRI*SPREVL Trigger: AAGGACTTCTCTGGGACTTCAGATCCTTATGTCAAG...GACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR TCA 90 bp | TCTGCTGTAATGCTGCATCCCTCGGGTGCAACCTACACTGAAAAACAAAGTGAAGCCGTCACACATCAGTaGGACTTTCACGTAGGGATC | + |
Preference number: 4 (lower is better) Translates to: SAVMLHPSGATYTEKQSEAVTHQ*DFHVGI Trigger: GATCCCTACGTGAAAGTCTCACTGATGTGTGACGGC...TTCACTTTGTTTTTCAGTGTAGGTTGCACCCGAGGGATGCAGCATTACAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR GCA 90 bp | TTGGCCTTCATTCTTGTAGGTATTTCCATTCCCCAAGTGCTGCAAAAGTGGTATTCTGTGACTTGTCGCTaGACACGGACGGCATGGGCA | + |
Preference number: 4 (lower is better) Translates to: LAFILVGISIPQVLQKWYSVTCR*TRTAWA Trigger: TGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGA...ATACCACTTTTGCAGCACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GGGCCATTACTTGGAAAACTGGAACACTTTCTGGGGTGGAATTATTCTCTGAAGAAAGGATGCACTCCCTaGGGAAGTCGGCCAAGTCGA | + |
Preference number: 4 (lower is better) Translates to: GPLLGKLEHFLGWNYSLKKGCTP*GSRPSR Trigger: TCGACTTGGCCGACTTCCCCAGGGAGTGCATCCTTT...CTTCAGAGAATAATTCCACCCCAGAAAGTGTTCCAGTTTTCCAAGTAATGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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3UTR CAA 72 bp | ACTTACTATGCCACTTGCTCTCTTCCACAGTCCAACTaGGCTTTTGACAGTGAGGGAGGAGCTTCTCTAGAG | + |
Preference number: 4 (lower is better) Translates to: TYYATCSLPQSN*AFDSEGGASLE Trigger: CTCTAGAGAAGCTCCTCCCTCACTGTCAAAAGCCAAGTTGGACTGTGGAAGAGAGCAAGTGGCATAGTAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTAGCTCACAGAGATATCTaGGTCGCGGAGCCGGGGTCT | + |
Preference number: 4 (lower is better) Translates to: HLSVILSHNTHFCVQERLAHRDI*VAEPGS Trigger: AGACCCCGGCTCCGCGACCCAGATATCTCTGTGAGC...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | GTACTAGGTGTATATGGAAGCCAGAACTTTCCAACATCTGCTGTAATGCTGCATATGGACAAGTGGATCTaGTCGATGCTCTCGGGAGGG | + |
Preference number: 4 (lower is better) Translates to: VLGVYGSQNFPTSAVMLHMDKWI*SMLSGG Trigger: CCCTCCCGAGAGCATCGACCAGATCCACTTGTCCAT...ATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR TCA 90 bp | CCTTCAAATGAAGTTGGAAGGAGATGGGAGTGGATCTGGGAGGCCAGGGAATGCAGTCATATTTTAAAATaGAGTTCAGTTTCCCGCAGG | + |
Preference number: 4 (lower is better) Translates to: PSNEVGRRWEWIWEARECSHILK*SSVSRR Trigger: CCTGCGGGAAACTGAACTTCATTTTAAAATATGACT...GCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CCA 90 bp | CTGGAAAGGAAGAGGCTACTTGGAAATAATGTTTTAGAATCCCAGAACCTGGGTTGTGGCTTATCTTCATaGAGGAGTCAGGGCAGGGTG | + |
Preference number: 4 (lower is better) Translates to: LERKRLLGNNVLESQNLGCGLSS*RSQGRV Trigger: CACCCTGCCCTGACTCCTCCATGAAGATAAGCCACA...ACCCAGGTTCTGGGATTCTAAAACATTATTTCCAAGTAGCCTCTTCCTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTAAGCATCTCACTCCAGTaGTCTCTGCCCAGCCGCTCA | + |
Preference number: 4 (lower is better) Translates to: HLSVILSHNTHFCVQERLSISLQ*SLPSRS Trigger: TGAGCGGCTGGGCAGAGACCACTGGAGTGAGATGCT...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR TCA 90 bp | TCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCATCCCGCAGGTGGTAGATaGAATCTTGGCAGCTGTCGT | + |
Preference number: 4 (lower is better) Translates to: SYLITHTSVSRKDYSWMHPAGGR*NLGSCR Trigger: ACGACAGCTGCCAAGATTTCATCTACCACCTGCGGG...ATGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 72 bp | GGGAGTGGATCTGGGAGGCCAGGGAATGCACTAAGCTaGAATGAATTAACATTGCCTTATACAACCAAAGGT | + |
Preference number: 4 (lower is better) Translates to: GSGSGRPGNALS*NELTLPYTTKG Trigger: ACCTTTGGTTGTATAAGGCAATGTTAATTCATTCAAGCTTAGTGCATTCCCTGGCCTCCCAGATCCACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | ATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCACTTGGCACACGCCAATaGCCTCATTGTGACCTACAC | + |
Preference number: 4 (lower is better) Translates to: ILSHNTHFCVQERLFLDALGTRQ*PHCDLH Trigger: GTGTAGGTCACAATGAGGTCATTGGCGTGTGCCAAG...TGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR GCA 90 bp | CTGGAAAGGAAGAGGCTACTTGGAAATAATGTTTTAGAATCCCAGAACCTGGGTCTTGGTTGTTGTCTTTaGTACCAGAGAACAGGCCTC | + |
Preference number: 4 (lower is better) Translates to: LERKRLLGNNVLESQNLGLGCCL*YQRTGL Trigger: GAGGCCTGTTCTCTGGTAGCAAAGACAACAACCAAG...ACCCAGGTTCTGGGATTCTAAAACATTATTTCCAAGTAGCCTCTTCCTTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR GCA 90 bp | ATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGATGCATATCCTTCCAAAGGATaGACTCCCTGGGGAAGTCGG | + |
Preference number: 4 (lower is better) Translates to: ILSHNTHFCVQERLFLDAYPSKG*TPWGSR Trigger: CCGACTTCCCCAGGGAGTGCATCCTTTGGAAGGATA...TGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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3UTR CAA 72 bp | GATTCACCACATCCAATTTGGAAAGAGGGCCAGTTATaGCTGTGGTTACAGCTGAGTATTTCTTCACTGGAG | + |
Preference number: 4 (lower is better) Translates to: DSPHPIWKEGQL*LWLQLSISSLE Trigger: CTCCAGTGAAGAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 72 bp | ACAGCTGAGTATTTCTTCACTGGAGTCATCTGGGTGTaGCTAGGTGGGAAAAGTTACTGCAGATCTTTGTTA | + |
Preference number: 4 (lower is better) Translates to: TAEYFFTGVIWV*LGGKSYCRSLL Trigger: TAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAAATACTCAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 72 bp | CTGGATCTAGTGACAATATTTCTGCTCCCTGTCCTGTaGGCACTTGGCCTTCATACTTTGGTTCTAAATACT | + |
Preference number: 4 (lower is better) Translates to: LDLVTIFLLPVL*ALGLHTLVLNT Trigger: AGTATTTAGAACCAAAGTATGAAGGCCAAGTGCCAACAGGACAGGGAGCAGAAATATTGTCACTAGATCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR TCA 90 bp | ACATCCAATTTGGAAAGAGGGCCAGTTATTGCTGTGGTTACAGCTGAGTATTTCGAAGCAAGTAGATCTTaGCATAAGGATCTGAAGTCC | + |
Preference number: 4 (lower is better) Translates to: TSNLERGPVIAVVTAEYFEASRS*HKDLKS Trigger: GGACTTCAGATCCTTATGTCAAGATCTACTTGCTTC...GAAATACTCAGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR TCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATCATACACAGAGAAGTaGAGCTTCCGAGCTTCAAGG | + |
Preference number: 4 (lower is better) Translates to: HLSVILSHNTHFCVQERLSYTEK*SFRASR Trigger: CCTTGAAGCTCGGAAGCTTCACTTCTCTGTGTATGA...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR GCA 90 bp | CATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTACTTGGTTGTTGTCTTTaGTACCAGAGAACAGGCCTC | + |
Preference number: 4 (lower is better) Translates to: HLSVILSHNTHFCVQERLLGCCL*YQRTGL Trigger: GAGGCCTGTTCTCTGGTAGCAAAGACAACAACCAAG...TAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 72 bp | AAAATAGATGAACCCTTCAGATTCACCACATCCAATTaGGAAAGAGGGCCAGTTATTGCTGTGGTTACAGCT | + |
Preference number: 4 (lower is better) Translates to: KIDEPFRFTTSN*ERGPVIAVVTA Trigger: AGCTGTAACCACAGCAATAACTGGCCCTCTTTCCAAATTGGATGTGGTGAATCTGAAGGGTTCATCTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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3UTR CAA 72 bp | AAGACAGTCATTAGCTCACAGGTAGTAAAGTTTGATTaGAAATCTGCTGCCTATTTAGCACCTGGATATATA | + |
Preference number: 4 (lower is better) Translates to: KTVISSQVVKFD*KSAAYLAPGYI Trigger: TATATATCCAGGTGCTAAATAGGCAGCAGATTTCAAATCAAACTTTACTACCTGTGAGCTAATGACTGTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS TCA 90 bp | CTGGGTCGCGGAGCCGGGGTCTGGCACGGTCCCGCAGGTGGTAGATaGAATCTTGGCAGCTGTCGTGCTCCAGGGCCCCTCGGGCACAGA | + |
Preference number: 5 (lower is better) Translates to: LGRGAGVWHGPAGGR*NLGSCRAPGPLGHR Trigger: TCTGTGCCCGAGGGGCCCTGGAGCACGACAGCTGCCAAGATTTCATCTACCACCTGCGGGACCGTGCCAGACCCCGGCTCCGCGACCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 ENSMUST00000137663.2 |
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CDS CCA 90 bp | GCTGATGGTGTTGGCTCTGTGACTTGTCGCTGCACACGGACGGCATaGGCACAGTTCTCCTGGCCCCCTGGCTGGGTGGAGAGGGGAATG | + |
Preference number: 5 (lower is better) Translates to: ADGVGSVTCRCTRTA*AQFSWPPGWVERGM Trigger: CATTCCCCTCTCCACCCAGCCAGGGGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS TCA 90 bp | AGCTCGCCCAGATCCACATTATCCGAGCTGATGGTGTTGGCTCTGTaGCTTGTCGCTGCACACGGACGGCATGGGCACAGTTCTCCTGGC | + |
Preference number: 5 (lower is better) Translates to: SSPRSTLSELMVLAL*LVAAHGRHGHSSPG Trigger: GCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGCTCGGATAATGTGGATCTGGGCGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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CDS TCA 90 bp | GCTGTCTTCGGATTGAGTTATGCCGAGCTGATGGTGTTGGCTCTGTaGCTTGTCGCTGCACACGGACGGCATGGGCACAGTTCTCCTGGC | + |
Preference number: 5 (lower is better) Translates to: AVFGLSYAELMVLAL*LVAAHGRHGHSSPG Trigger: GCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGCTCGGCATAACTCAATCCGAAGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CAA 90 bp | GTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGTGTTGGCTCTGTGACTaGTCGCTGCACACGGACGGC | + |
Preference number: 5 (lower is better) Translates to: VYTLGCCIWKQPEGSCVKCWLCD*SLHTDG Trigger: GCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACA...CTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | GGACCAGTGTCATGCCCATCCAACCAAAGGCCATCTTGGCACTCAAGCCACTTATCCGGGTTCGACAGGTaGAGCTGTCTTCGGATTGAG | + |
Preference number: 5 (lower is better) Translates to: GPVSCPSNQRPSWHSSHLSGFDR*SCLRIE Trigger: CTCAATCCGAAGACAGCTCAACCTGTCGAACCCGGA...TAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CAA 90 bp | GGCTGCCCAAGTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGTGTTCTCCTGCTCGTTaGTCTCTGTGTCGGTGTAAT | + |
Preference number: 5 (lower is better) Translates to: GCPSLYPGLLHMETARRQCSPAR*SLCRCN Trigger: ATTACACCGACACAGAGACAAACGAGCAGGAGAACA...CTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGACTTGGGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | CTGCAGATCTTTGTTACATGGTTGTCCGACTGTGTCCTTGGCACAAGCAGTCTTGTCCCAGAGAAGTCCTaGGCAGGCAGATTGACGGCT | + |
Preference number: 5 (lower is better) Translates to: LQIFVTWLSDCVLGTSSLVPEKS*AGRLTA Trigger: AGCCGTCAATCTGCCTGCCAAGGACTTCTCTGGGAC...AAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CAA 90 bp | AGAACACAAGAGAACAGAGGCAGAGTTGCAAATGAGCTGAGGGAATTCAGATTGTGTTGGCTCTGTGACTaGTCGCTGCACACGGACGGC | + |
Preference number: 5 (lower is better) Translates to: RTQENRGRVANELREFRLCWLCD*SLHTDG Trigger: GCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACA...CAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | GTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGTCTTGGTTGTTGTCTTaGCTACCAGAGAACAGGCCT | + |
Preference number: 5 (lower is better) Translates to: VYTLGCCIWKQPEGSCVKSWLLS*LPENRP Trigger: AGGCCTGTTCTCTGGTAGCAAAGACAACAACCAAGA...CTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS TCA 90 bp | AACTCTGGTTTAATTCTACCAATCCCAGTCAGCTGCTCCTGCCTCTaGAGCTGCTGGATATTAAAGTCCGGGTTCGACAGGTTGAGCTGT | + |
Preference number: 5 (lower is better) Translates to: NSGLILPIPVSCSCL*SCWILKSGFDRLSC Trigger: ACAGCTCAACCTGTCGAACCCGGACTTTAATATCCAGCAGCTTCAGAGGCAGGAGCAGCTGACTGGGATTGGTAGAATTAAACCAGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CAA 90 bp | GTCTATACCCTGGGCTGTTGCATATGGAAACAGCCAGAAGGCAGCTGTGTCAAGTTAAGAGGCTCTTGGTaGTTGTCTTTGCTACCAGAG | + |
Preference number: 5 (lower is better) Translates to: VYTLGCCIWKQPEGSCVKLRGSW*LSLLPE Trigger: CTCTGGTAGCAAAGACAACAACCAAGAGCCTCTTAA...CTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGCCCAGGGTATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | ACCAAAGGTCTCCACCCTTTTAAGACACGACAAGATCTGGCGTTGGCAGTAGGATGTTCTCCTGCTCGTTaGTCTCTGTGTCGGTGTAAT | + |
Preference number: 5 (lower is better) Translates to: TKGLHPFKTRQDLALAVGCSPAR*SLCRCN Trigger: ATTACACCGACACAGAGACAAACGAGCAGGAGAACA...TCCTACTGCCAACGCCAGATCTTGTCGTGTCTTAAAAGGGTGGAGACCTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS TCA 90 bp | TATGATGGTGATGGTCAGCCTGCCAGCCGTTGGAAGATAGCAGAGTaGAAACATAAGCTCGCCCAGATCCACATTATCGTTGGTGACATA | + |
Preference number: 5 (lower is better) Translates to: YDGDGQPASRWKIAE*KHKLAQIHIIVGDI Trigger: TATGTCACCAACGATAATGTGGATCTGGGCGAGCTTATGTTTTCACTCTGCTATCTTCCAACGGCTGGCAGGCTGACCATCACCATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS-3UTR CAA 90 bp | GTGTTGCTAGGTGGGAAAAGTTACTGCAGATCTTTGTTACATGGTTGTCCGACTGTGGTAGATGAAATCTaGGCAGCTGTCGTGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: VLLGGKSYCRSLLHGCPTVVDEI*AAVVLQ Trigger: CTGGAGCACGACAGCTGCCAAGATTTCATCTACCAC...AGTCGGACAACCATGTAACAAAGATCTGCAGTAACTTTTCCCACCTAGCAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | TGGTATGTGTCTGAGGTGGAAAAGAGCCTCTTTCTGTGGCTGCCCAAGTCTATATCTTGGTTGTTGTCTTaGCTACCAGAGAACAGGCCT | + |
Preference number: 5 (lower is better) Translates to: WYVSEVEKSLFLWLPKSISWLLS*LPENRP Trigger: AGGCCTGTTCTCTGGTAGCAAAGACAACAACCAAGA...TATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTCAGACACATACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | ACCAAAGGTCTCCACCCTTTTAAGACACGACAAGATCTGGCGTTGGCAGTAGGATTAAGAGGCTCTTGGTaGTTGTCTTTGCTACCAGAG | + |
Preference number: 5 (lower is better) Translates to: TKGLHPFKTRQDLALAVGLRGSW*LSLLPE Trigger: CTCTGGTAGCAAAGACAACAACCAAGAGCCTCTTAA...TCCTACTGCCAACGCCAGATCTTGTCGTGTCTTAAAAGGGTGGAGACCTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | TTCCAGTGTCATCTCTCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGTCAGCCTGCCAGCCGTaGGAAGATAGCAGAGTGAAA | + |
Preference number: 5 (lower is better) Translates to: FQCHLSVILSHNTHFCVQSACQP*EDSRVK Trigger: TTTCACTCTGCTATCTTCCAACGGCTGGCAGGCTGA...CTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATGACACTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | TTGGCCTTCATTCTTGTAGGTATTTCCATTCCCCAAGTGCTGCAAAAGTGGTATTCAGCCTGCCAGCCGTaGGAAGATAGCAGAGTGAAA | + |
Preference number: 5 (lower is better) Translates to: LAFILVGISIPQVLQKWYSACQP*EDSRVK Trigger: TTTCACTCTGCTATCTTCCAACGGCTGGCAGGCTGA...ATACCACTTTTGCAGCACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | AGAACACAAGAGAACAGAGGCAGAGTTGCAAATGAGCTGAGGGAATTCAGATTGAGAGGCTCTTGGTTGTaGTCTTTGCTACCAGAGAAC | + |
Preference number: 5 (lower is better) Translates to: RTQENRGRVANELREFRLRGSWL*SLLPEN Trigger: GTTCTCTGGTAGCAAAGACAACAACCAAGAGCCTCT...CAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS-3UTR CAA 90 bp | TCAGTGATCTTATCTCATAACACACACTTCTGTGTCCAGGAAAGATTATTCCTGGTGGTAGATGAAATCTaGGCAGCTGTCGTGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: SVILSHNTHFCVQERLFLVVDEI*AAVVLQ Trigger: CTGGAGCACGACAGCTGCCAAGATTTCATCTACCAC...CAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS TCA 72 bp | GGAGCCGGGGTCTGGCACGGTCCCGCAGGTGGTAGATaGAATCTTGGCAGCTGTCGTGCTCCAGGGCCCCTC | + |
Preference number: 6 (lower is better) Translates to: GAGVWHGPAGGR*NLGSCRAPGPL Trigger: GAGGGGCCCTGGAGCACGACAGCTGCCAAGATTTCATCTACCACCTGCGGGACCGTGCCAGACCCCGGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 ENSMUST00000137663.2 |
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CDS CCA 72 bp | GTTGGCTCTGTGACTTGTCGCTGCACACGGACGGCATaGGCACAGTTCTCCTGGCCCCCTGGCTGGGTGGAG | + |
Preference number: 6 (lower is better) Translates to: VGSVTCRCTRTA*AQFSWPPGWVE Trigger: CTCCACCCAGCCAGGGGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 |
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CDS CAA 72 bp | GGGTCTGGCACGGTCCCGCAGGTGGTAGATGAAATCTaGGCAGCTGTCGTGCTCCAGGGCCCCTCGGGCACA | + |
Preference number: 6 (lower is better) Translates to: GSGTVPQVVDEI*AAVVLQGPSGT Trigger: TGTGCCCGAGGGGCCCTGGAGCACGACAGCTGCCAAGATTTCATCTACCACCTGCGGGACCGTGCCAGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073459.12 ENSMUST00000130414.8 ENSMUST00000137663.2 |
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CDS GCA 72 bp | TGCCGAGCTGATGGTGTTGGCTCTGTGACTTGTCGCTaGACACGGACGGCATGGGCACAGTTCTCCTGGCCC | + |
Preference number: 6 (lower is better) Translates to: CRADGVGSVTCR*TRTAWAQFSWP Trigger: GGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGCTCGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS GCA 72 bp | ATCCGAGCTGATGGTGTTGGCTCTGTGACTTGTCGCTaGACACGGACGGCATGGGCACAGTTCTCCTGGCCC | + |
Preference number: 6 (lower is better) Translates to: IRADGVGSVTCR*TRTAWAQFSWP Trigger: GGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGCTCGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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CDS TCA 72 bp | AGATCCACATTATCCGAGCTGATGGTGTTGGCTCTGTaGCTTGTCGCTGCACACGGACGGCATGGGCACAGT | + |
Preference number: 6 (lower is better) Translates to: RSTLSELMVLAL*LVAAHGRHGHS Trigger: ACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGCTCGGATAATGTGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130414.8 |
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CDS CAA 72 bp | CCGCAGGCTTTGCTGTTACTCCTCCGCCCATCGTCGTaGTCCAGTGACCTCTGTTTGTATAACTCTGGTTTA | + |
Preference number: 6 (lower is better) Translates to: PQALLLLLRPSS*SSDLCLYNSGL Trigger: TAAACCAGAGTTATACAAACAGAGGTCACTGGACAACGACGATGGGCGGAGGAGTAACAGCAAAGCCTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS TCA 72 bp | TTAATTCTACCAATCCCAGTCAGCTGCTCCTGCCTCTaGAGCTGCTGGATATTAAAGTCCGGGTTCGACAGG | + |
Preference number: 6 (lower is better) Translates to: LILPIPVSCSCL*SCWILKSGFDR Trigger: CCTGTCGAACCCGGACTTTAATATCCAGCAGCTTCAGAGGCAGGAGCAGCTGACTGGGATTGGTAGAATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS CAA 90 bp | TTGCTGTTACTCCTCCGCCCATCGTCGTTGTCCAGTGACCTCTGTTaGTATAACTCTGGTTTAATTCTACCAATCCCAGTCAGCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: LLLLLRPSSLSSDLC*YNSGLILPIPVSCS Trigger: GGAGCAGCTGACTGGGATTGGTAGAATTAAACCAGAGTTATACAAACAGAGGTCACTGGACAACGACGATGGGCGGAGGAGTAACAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS CAA 72 bp | CTCCTCCGCCCATCGTCGTTGTCCAGTGACCTCTGTTaGTATAACTCTGGTTTAATTCTACCAATCCCAGTC | + |
Preference number: 6 (lower is better) Translates to: LLRPSSLSSDLC*YNSGLILPIPV Trigger: GACTGGGATTGGTAGAATTAAACCAGAGTTATACAAACAGAGGTCACTGGACAACGACGATGGGCGGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS CAA 90 bp | TTCAGTTTCCCGCAGGCTTTGCTGTTACTCCTCCGCCCATCGTCGTaGTCCAGTGACCTCTGTTTGTATAACTCTGGTTTAATTCTACCA | + |
Preference number: 6 (lower is better) Translates to: FSFPQALLLLLRPSS*SSDLCLYNSGLILP Trigger: TGGTAGAATTAAACCAGAGTTATACAAACAGAGGTCACTGGACAACGACGATGGGCGGAGGAGTAACAGCAAAGCCTGCGGGAAACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS CAA 90 bp | AAGTCGCAGTCATATTTTAAAATGAAGTTCAGTTTCCCGCAGGCTTaGCTGTTACTCCTCCGCCCATCGTCGTTGTCCAGTGACCTCTGT | + |
Preference number: 6 (lower is better) Translates to: KSQSYFKMKFSFPQA*LLLLRPSSLSSDLC Trigger: ACAGAGGTCACTGGACAACGACGATGGGCGGAGGAGTAACAGCAAAGCCTGCGGGAAACTGAACTTCATTTTAAAATATGACTGCGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS TCA 72 bp | GGTGTTTTGTTTTCCGGTCAGGAAGCAAGTAGATCTTaGCATAAGGATCTGAAGTCCCAGAGAAGTCCTTGG | + |
Preference number: 6 (lower is better) Translates to: GVLFSGQEASRS*HKDLKSQRSPW Trigger: CCAAGGACTTCTCTGGGACTTCAGATCCTTATGTCAAGATCTACTTGCTTCCTGACCGGAAAACAAAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |
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CDS CAA 72 bp | TCATATTTTAAAATGAAGTTCAGTTTCCCGCAGGCTTaGCTGTTACTCCTCCGCCCATCGTCGTTGTCCAGT | + |
Preference number: 6 (lower is better) Translates to: SYFKMKFSFPQA*LLLLRPSSLSS Trigger: ACTGGACAACGACGATGGGCGGAGGAGTAACAGCAAAGCCTGCGGGAAACTGAACTTCATTTTAAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073459.12 |