Pregenerated sensors for SYT8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031098Ensembl transcript IDs: ENSMUST00000097939.9, ENSMUST00000105976.8, ENSMUST00000105977.3, ENSMUST00000118276.8, ENSMUST00000122393.2, ENSMUST00000210746.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGCAGACCACGGGCCCAGACAGCCAGCACCAGGTCCACACTCTaGAGCTGGCTAACGGGAACCAGGAAGACGAAGGCCTCGTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCRPRAQTASTRSTL*SWLTGTRKTKASLK Trigger: CTTCAACGAGGCCTTCGTCTTCCTGGTTCCCGTTAGCCAGCTCCAGAGTGTGGACCTGGTGCTGGCTGTCTGGGCCCGTGGTCTGCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGCTTTCAGGAAACCCAGCAGCACTTTaGCCACAGGCTCAGTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: QISTALHLGKLRPAVLSGNPAAL*PQAQSG Trigger: TCCGGACTGAGCCTGTGGGCAAAGTGCTGCTGGGTT...TCCTGAAAGCACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGGAGCTGGCTAACGGGAACCAGGAAGACGAAGGCCTCGTTGAAGTAGGGTTCTTCCATTTTCTCTaGTTTAACATAAGCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: TLELANGNQEDEGLVEVGFFHFL*FNISWI Trigger: GATCCAGCTTATGTTAAACCAGAGAAAATGGAAGAA...CCCTACTTCAACGAGGCCTTCGTCTTCCTGGTTCCCGTTAGCCAGCTCCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| 3UTR CCA 72 bp | CCACGGGCCCAGACAGCCAGCACCAGGTCCACACTCTaGAGCTGGCTAACGGGAACCAGGAAGACGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: PRAQTASTRSTL*SWLTGTRKTKA Trigger: GGCCTTCGTCTTCCTGGTTCCCGTTAGCCAGCTCCAGAGTGTGGACCTGGTGCTGGCTGTCTGGGCCCGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| 3UTR CCA 72 bp | GCCCAGACAGCCAGCACCAGGTCCACACTCTGGAGCTaGCTAACGGGAACCAGGAAGACGAAGGCCTCGTTG | + |
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Preference number: 3 (lower is better) Translates to: AQTASTRSTLWS*LTGTRKTKASL Trigger: CAACGAGGCCTTCGTCTTCCTGGTTCCCGTTAGCCAGCTCCAGAGTGTGGACCTGGTGCTGGCTGTCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| 3UTR-3UTR CAA 90 bp | GGCGAGGCTGCAGGGCCAGAACACGATCCACTTCCCTGGGGGACCGCAGGTGGTTTCTTGGAGGATGTTTaGCTCTTCTTCCATTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GEAAGPEHDPLPWGTAGGFLEDV*LFFHFL Trigger: GAGAAAATGGAAGAAGAGCAAAACATCCTCCAAGAA...ACCACCTGCGGTCCCCCAGGGAAGTGGATCGTGTTCTGGCCCTGCAGCCTCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| 3UTR CAA 72 bp | AGGGGTTGGCCAGAAGCCCGGGAACCCAGCAGCACTTaGCCCACAGGCTCAGTCCGGAGCTGCAGACCACGG | + |
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Preference number: 4 (lower is better) Translates to: RGWPEAREPSST*PTGSVRSCRPR Trigger: CCGTGGTCTGCAGCTCCGGACTGAGCCTGTGGGCAAAGTGCTGCTGGGTTCCCGGGCTTCTGGCCAACCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| CDS-3UTR TCA 90 bp | GAGGCTGCAGGGCCAGAACACGATCCACTTCCCTGGGGGACCGCAGGTGGTGCCGTTCTGAAAACCGCTTaGAGTCCCACAGCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: EAAGPEHDPLPWGTAGGAVLKTA*SPTAAP Trigger: AGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAAC...GGCACCACCTGCGGTCCCCCAGGGAAGTGGATCGTGTTCTGGCCCTGCAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| CDS-3UTR CCA 90 bp | AGGGGTTGGCCAGAAGCCCGGGAACCCAGCAGCACTTTGCCCACAGGCTCAGTCGCTGCACCTTCAGAGTaGCTTTGGGCAGCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGWPEAREPSSTLPTGSVAAPSE*LWAALL Trigger: CAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGC...GACTGAGCCTGTGGGCAAAGTGCTGCTGGGTTCCCGGGCTTCTGGCCAACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210746.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGCCTGGAGGGCCTAGCTaGTACCAGCTCTCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: EPAQISTALHLGKLRPAVPGGPS*YQLSRT Trigger: TGTCCTGGAGAGCTGGTACCAGCTAGGCCCTCCAGG...CACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGAGCTGTGGCATCAAGTaGGGCAGAGGTGCTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: EPAQISTALHLGKLRPAVSCGIK*GRGAEG Trigger: CCCTTCAGCACCTCTGCCCCACTTGATGCCACAGCT...CACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | CCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGCTTCCTGGTGATGAGGTCTaGGATGAGACTGGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAQISTALHLGKLRPAVLPGDEV*DETGPS Trigger: GCTGGGCCCAGTCTCATCCCAGACCTCATCACCAGG...AAGCACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | GCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGCTGGGCAGCTCTGCTGGTaGGACCAGAAAGCAGCATGT | + |
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Preference number: 4 (lower is better) Translates to: ACTNIHSSPSGKTETRGAGQLCW*DQKAAC Trigger: ACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCC...AGCACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | ATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGACTGGGGGACCGCAGGTaGTGCCACTGGGCGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: ITERSEEPAQISTALHLGLGDRR*CHWAMG Trigger: GCCCATCGCCCAGTGGCACCACCTGCGGTCCCCCAG...TCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | GCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGCTTTTGGGCAGCTCTGCTaGTGGGACCAGAAAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ACTNIHSSPSGKTETRGAFGQLC*WDQKAA Trigger: TGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAA...AGCACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | CCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGTGCTTCCTTCAGAGTGGCTTTaGGCAGCTCTGCTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PAQISTALHLGKLRPAVLPSEWL*AALLVG Trigger: TCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGG...AAGCACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGCGGCTGCACCTTCAGAGTaGCTTTGGGCAGCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EEPAQISTALHLGKLRPAAAPSE*LWAALL Trigger: CAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGC...CGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR CCA 90 bp | TCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCGTGCCCAGGGGTAGTTaGAGCTCACCCAGTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SEEPAQISTALHLGKLRPVPRGS*SSPSGS Trigger: CGAGCCACTGGGTGAGCTCCAACTACCCCTGGGCAC...GGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCCAACCACAGTCAGGCTaGCTGAGCTGGGCACGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SEEPAQISTALHLGKLRPQPQSG*LSWARS Trigger: GCTACGTGCCCAGCTCAGGCAGCCTGACTGTGGTTG...GGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR GCA 90 bp | GAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGCACAGCTCCCCCATCTaGTCAGGCTCAGTGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ERSEEPAQISTALHLGKLHSSPI*SGSVVP Trigger: AGGGACCACTGAGCCTGAGCAGATGGGGGAGCTGTG...CAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAAAGGGGAAGGCGAGGCTaGAGGGCCAGAACACGATCC | + |
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Preference number: 4 (lower is better) Translates to: TERSEEPAQISTALHLGKRGRRG*RARTRS Trigger: GGATCGTGTTCTGGCCCTGCAGCCTCGCCTTCCCCT...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAAGTGCCCAGGGGTAGTTaGAGCTCACCCAGTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TERSEEPAQISTALHLGKVPRGS*SSPSGS Trigger: CGAGCCACTGGGTGAGCTCCAACTACCCCTGGGCAC...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR TCA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTCTCCAGGACATGTTaGAGGTCCACGGTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TERSEEPAQISTALHLGKLSRTC*RSTVPR Trigger: CCTGGGCACCGTGGACCTTCAACATGTCCTGGAGAG...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTTCACGTAGGCCTCTaGAAGCCCCGGATTCAGACC | + |
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Preference number: 4 (lower is better) Translates to: TERSEEPAQISTALHLGKLHVGL*KPRIQT Trigger: GGTCTGAATCCGGGGCTTGCAGAGGCCTACGTGAAG...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | ATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGATGTCTTCTCCCAGACTaGGTGGACACACTGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ITERSEEPAQISTALHLGCLLPD*VDTLTQ Trigger: CTGGGTCAGTGTGTCCACCCAGTCTGGGAGAAGACA...TCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR TCA 90 bp | AATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCACTGGGTGGACACACTaGCCCAGGCGTAGGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: NLFITERSEEPAQISTALTGWTH*PRRRGL Trigger: CAGACCCCTACGCCTGGGTCAGTGTGTCCACCCAGT...GAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAAGTTCTGAAAACCGCTTaGAGTCCCACAGCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: TERSEEPAQISTALHLGKVLKTA*SPTAAP Trigger: AGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAAC...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR GCA 90 bp | TTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGAGCATGTCTGCCCAGTaGTGTAGGGGTTGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FITERSEEPAQISTALHLSMSAQ*CRGWPE Trigger: TTCTGGCCAACCCCTACAGCACTGGGCAGACATGCT...CAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAAGGCAATAGCAACAGATaGCACAGAGCAAACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TERSEEPAQISTALHLGKGNSNR*HRANRR Trigger: TCTCCTGTTTGCTCTGTGTCATCTGTTGCTATTGCC...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | GTGAAAGAGAATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCCCTGGAGGGCCTAGCTaGTACCAGCTCTCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: VKENLFITERSEEPAQISPGGPS*YQLSRT Trigger: TGTCCTGGAGAGCTGGTACCAGCTAGGCCCTCCAGG...GGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATTTCAGGTTTCCAGCCTaGCTCAGGCCCACTCTAATC | + |
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Preference number: 4 (lower is better) Translates to: LFITERSEEPAQISTALHFRFPA*LRPTLI Trigger: GATTAGAGTGGGCCTGAGGCAGGCTGGAAACCTGAA...ATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR GCA 90 bp | GTGAAAGAGAATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCAACCCAGCAGCACTTTaGCCACAGGCTCAGTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VKENLFITERSEEPAQISNPAAL*PQAQSG Trigger: TCCGGACTGAGCCTGTGGGCAAAGTGCTGCTGGGTT...GGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGAATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACACGTAGGGGTCTGCTGTaGCCTCAGCCTTCAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: KENLFITERSEEPAQISTRRGLL*PQPSGF Trigger: GAAACCTGAAGGCTGAGGGCACAGCAGACCCCTACG...TGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | TTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGCAGTTTCTTTATCCTTaGGTTGCTTCCTGTGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: LLQRDLKSLHKYPQLSIWQFLYP*VASCGD Trigger: ATCGCCACAGGAAGCAACCCAAGGATAAAGAAACTG...CCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | AATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCATGTCTCTTCAAACATaGGAGAGAGCGTCCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: NLFITERSEEPAQISTALMSLQT*ERASLG Trigger: ACCGAGGGACGCTCTCTCCCATGTTTGAAGAGACAT...GAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CCA 90 bp | TCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACTGAGACCCTTCTTCCATTTTCTCTaGTTTAACATAAGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SEEPAQISTALHLGKLRPFFHFL*FNISWI Trigger: GATCCAGCTTATGTTAAACCAGAGAAAATGGAAGAA...GGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGAATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGAGAGCGTCCCTCGGTaGACCTTTGTCTCATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KENLFITERSEEPAQISTESVPR*TFVSCL Trigger: AAGACATGAGACAAAGGTGCACCGAGGGACGCTCTC...TGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR GCA 90 bp | TTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGTCTTGGAGGATGTTTTaGTCTTCTTCCATTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FITERSEEPAQISTALHLSWRMF*SSSIFS Trigger: AGAGAAAATGGAAGAAGAGCAAAACATCCTCCAAGA...CAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS TCA 90 bp | GTGGTCCCTGGAGGGCCTAGCTGGTACCAGCTCTCCAGGACATGTTaGAGGTCCACGGTGCCCAGGGGTAGTTGGAGCTCACCCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VVPGGPSWYQLSRTC*RSTVPRGSWSSPSG Trigger: GCCACTGGGTGAGCTCCAACTACCCCTGGGCACCGTGGACCTTCAACATGTCCTGGAGAGCTGGTACCAGCTAGGCCCTCCAGGGACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS CCA 90 bp | GATAAAGAGGGTCCAGCGAGGCCAGGGGATCCTGGTGATGAGGTCTaGGATGAGACTGGGCCCAGCTGTGGCATCAAGTGGGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: DKEGPARPGDPGDEV*DETGPSCGIKWGRG Trigger: ACCTCTGCCCCACTTGATGCCACAGCTGGGCCCAGTCTCATCCCAGACCTCATCACCAGGATCCCCTGGCCTCGCTGGACCCTCTTTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000105977.3 ENSMUST00000122393.2 |
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| CDS CCA 90 bp | TCAGACCCCGAGCCTCCAGTACAACCACAGTCAGGCTGCCTGAGCTaGGCACGTAGCGTAGTGAGAAGCACAGCTCCCCCATCTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SDPEPPVQPQSGCLS*ARSVVRSTAPPSAQ Trigger: CTGAGCAGATGGGGGAGCTGTGCTTCTCACTACGCTACGTGCCCAGCTCAGGCAGCCTGACTGTGGTTGTACTGGAGGCTCGGGGTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 90 bp | CGTAGCGTAGTGAGAAGCACAGCTCCCCCATCTGCTCAGGCTCAGTaGTCCCTGGAGGGCCTAGCTGGTACCAGCTCTCCAGGACATGTT | + |
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Preference number: 5 (lower is better) Translates to: RSVVRSTAPPSAQAQ*SLEGLAGTSSPGHV Trigger: AACATGTCCTGGAGAGCTGGTACCAGCTAGGCCCTCCAGGGACCACTGAGCCTGAGCAGATGGGGGAGCTGTGCTTCTCACTACGCTACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS GCA 90 bp | GGCCTAGCTGGTACCAGCTCTCCAGGACATGTTGAAGGTCCACGGTaGCCAGGGGTAGTTGGAGCTCACCCAGTGGCTCGTGTTCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GLAGTSSPGHVEGPR*PGVVGAHPVARVLK Trigger: TTTCAGAACACGAGCCACTGGGTGAGCTCCAACTACCCCTGGGCACCGTGGACCTTCAACATGTCCTGGAGAGCTGGTACCAGCTAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS TCA 90 bp | GGGGTAGTTGGAGCTCACCCAGTGGCTCGTGTTCTGAAAACCGCTTaGAGTCCCACAGCTGCACCTTCAGAGTGGCTTTGGGCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GVVGAHPVARVLKTA*SPTAAPSEWLWAAL Trigger: CAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAACACGAGCCACTGGGTGAGCTCCAACTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS CCA 90 bp | GTCCCACAGCTGCACCTTCAGAGTGGCTTTGGGCAGCTCTGCTGGTaGGACCAGAAAGCAGCATGTCTCTTCAAACATGGGAGAGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: VPQLHLQSGFGQLCW*DQKAACLFKHGRER Trigger: ACGCTCTCTCCCATGTTTGAAGAGACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 90 bp | GAAGTCCCACAGCTGCACCTTCAGAGTGGCTTTGGGCAGCTCTGCTaGTGGGACCAGAAAGCAGCATGTCTCTTCAAACATGGGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: EVPQLHLQSGFGQLC*WDQKAACLFKHGRE Trigger: CTCTCTCCCATGTTTGAAGAGACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS TCA 90 bp | CCTTGGGTTGCTTCCTGTGGCGATGGCGGTGGCAATAGCAACAGATaGCACAGAGCAAACAGGAGACTAAGAGGACTCCAGCAGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PWVASCGDGGGNSNR*HRANRRLRGLQQQG Trigger: TCCTTGCTGCTGGAGTCCTCTTAGTCTCCTGTTTGCTCTGTGTCATCTGTTGCTATTGCCACCGCCATCGCCACAGGAAGCAACCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000105977.3 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS GCA 90 bp | CTTGAAGTCCCACAGCTGCACCTTCAGAGTGGCTTTGGGCAGCTCTaGTGGTGGGACCAGAAAGCAGCATGTCTCTTCAAACATGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LEVPQLHLQSGFGQL*WWDQKAACLFKHGR Trigger: TCTCCCATGTTTGAAGAGACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS-3UTR CAA 90 bp | CAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAACGAACCCAGCAGCACTTaGCCCACAGGCTCAGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: QRDLKSLHKYPQLSIWENEPSST*PTGSVR Trigger: CCGGACTGAGCCTGTGGGCAAAGTGCTGCTGGGTTC...GTTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS GCA 90 bp | AGAAAGCAGCATGTCTCTTCAAACATGGGAGAGAGCGTCCCTCGGTaGACCTTTGTCTCATGTCTTCTCCCAGACTGGGTGGACACACTG | + |
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Preference number: 5 (lower is better) Translates to: RKQHVSSNMGESVPR*TFVSCLLPDWVDTL Trigger: CAGTGTGTCCACCCAGTCTGGGAGAAGACATGAGACAAAGGTGCACCGAGGGACGCTCTCTCCCATGTTTGAAGAGACATGCTGCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAAAAGCTCTCCAGGACATGTaGAAGGTCCACGGTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TERSEEPAQISTALHLGKALQDM*KVHGAQ Trigger: CTGGGCACCGTGGACCTTCAACATGTCCTGGAGAGC...TTTTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118276.8 ENSMUST00000210746.2 |
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| CDS-3UTR CAA 90 bp | TTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAATCCCTCGGTGCACCTTaGTCTCATGTCTTCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQRDLKSLHKYPQLSIWESLGAP*SHVFSQ Trigger: CTGGGAGAAGACATGAGACAAAGGTGCACCGAGGGA...TTCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCACCTTCAGAGTGGCTTaGGGCAGCTCTGCTGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ICLLQRDLKSLHKYPQLSTFRVA*GSSAGG Trigger: CCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGT...GGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CAA 90 bp | ATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATCTGGGAGTAGTCGTGCCTTTCTaGGAGGATGTTTTGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ITERSEEPAQISTALHLGVVVPF*EDVLLF Trigger: GAAGAGCAAAACATCCTCCAAGAAAGGCACGACTAC...TCCCAGATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CAA 90 bp | GTGAAAGAGAATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCGCAGTCCACATCTGGTaGAACCAGGTGAGTAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: VKENLFITERSEEPAQISAVHIW*NQVSSG Trigger: ACCACTACTCACCTGGTTCAACCAGATGTGGACTGC...GGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CAA 90 bp | AAGAGAATTTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGACAGTTTCTTTATCCTaGGGTTGCTTCCTGTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: KRICLLQRDLKSLHKYPQTVSLS*GCFLWR Trigger: TCGCCACAGGAAGCAACCCAAGGATAAAGAAACTGT...CTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS-3UTR CAA 90 bp | TTGTTTATTACAGAGAGATCTGAAGAGCCTGCACAAATATCCACAGCTCTCCATTTCTTGGAGGATGTTTaGCTCTTCTTCCATTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LFITERSEEPAQISTALHFLEDV*LFFHFL Trigger: GAGAAAATGGAAGAAGAGCAAAACATCCTCCAAGAA...ATGGAGAGCTGTGGATATTTGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118276.8 |
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| CDS GCA 72 bp | AGACTGGGTGGACACACTGACCCAGGCGTAGGGGTCTaGTGTGCCCTCAGCCTTCAGGTTTCCAGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RLGGHTDPGVGV*CALSLQVSSLP Trigger: AGGCAGGCTGGAAACCTGAAGGCTGAGGGCACAGCAGACCCCTACGCCTGGGTCAGTGTGTCCACCCAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 72 bp | GTGAGAAGCACAGCTCCCCCATCTGCTCAGGCTCAGTaGTCCCTGGAGGGCCTAGCTGGTACCAGCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VRSTAPPSAQAQ*SLEGLAGTSSP Trigger: TGGAGAGCTGGTACCAGCTAGGCCCTCCAGGGACCACTGAGCCTGAGCAGATGGGGGAGCTGTGCTTCTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS TCA 72 bp | GGAGGGCCTAGCTGGTACCAGCTCTCCAGGACATGTTaGAGGTCCACGGTGCCCAGGGGTAGTTGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GGPSWYQLSRTC*RSTVPRGSWSS Trigger: TGAGCTCCAACTACCCCTGGGCACCGTGGACCTTCAACATGTCCTGGAGAGCTGGTACCAGCTAGGCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS GCA 72 bp | GGTACCAGCTCTCCAGGACATGTTGAAGGTCCACGGTaGCCAGGGGTAGTTGGAGCTCACCCAGTGGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: GTSSPGHVEGPR*PGVVGAHPVAR Trigger: ACGAGCCACTGGGTGAGCTCCAACTACCCCTGGGCACCGTGGACCTTCAACATGTCCTGGAGAGCTGGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS GCA 72 bp | TCAGACCCCGAGCCTCCAGTACAACCACAGTCAGGCTaGCTGAGCTGGGCACGTAGCGTAGTGAGAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: SDPEPPVQPQSG*LSWARSVVRST Trigger: TGTGCTTCTCACTACGCTACGTGCCCAGCTCAGGCAGCCTGACTGTGGTTGTACTGGAGGCTCGGGGTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CAA 72 bp | CGCTTGAAGTCCCACAGCTGCACCTTCAGAGTGGCTTaGGGCAGCTCTGCTGGTGGGACCAGAAAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RLKSHSCTFRVA*GSSAGGTRKQH Trigger: ATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CAA 90 bp | AGGGGTAGTTGGAGCTCACCCAGTGGCTCGTGTTCTGAAAACCGCTaGAAGTCCCACAGCTGCACCTTCAGAGTGGCTTTGGGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RGSWSSPSGSCSENR*KSHSCTFRVALGSS Trigger: AGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAACACGAGCCACTGGGTGAGCTCCAACTACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS TCA 72 bp | GGAGCTCACCCAGTGGCTCGTGTTCTGAAAACCGCTTaGAGTCCCACAGCTGCACCTTCAGAGTGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GAHPVARVLKTA*SPTAAPSEWLW Trigger: CCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAACACGAGCCACTGGGTGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS CAA 72 bp | GGCACTGCCCAGGCCCACAGTTTCTTTATCCTTGGGTaGCTTCCTGTGGCGATGGCGGTGGCAATAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: GTAQAHSFFILG*LPVAMAVAIAT Trigger: TGTTGCTATTGCCACCGCCATCGCCACAGGAAGCAACCCAAGGATAAAGAAACTGTGGGCCTGGGCAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000105977.3 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 72 bp | CTGCACCTTCAGAGTGGCTTTGGGCAGCTCTGCTGGTaGGACCAGAAAGCAGCATGTCTCTTCAAACATGGG | + |
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Preference number: 6 (lower is better) Translates to: LHLQSGFGQLCW*DQKAACLFKHG Trigger: CCCATGTTTGAAGAGACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CAA 72 bp | CTTCAAACATGGGAGAGAGCGTCCCTCGGTGCACCTTaGTCTCATGTCTTCTCCCAGACTGGGTGGACACAC | + |
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Preference number: 6 (lower is better) Translates to: LQTWERASLGAP*SHVFSQTGWTH Trigger: GTGTGTCCACCCAGTCTGGGAGAAGACATGAGACAAAGGTGCACCGAGGGACGCTCTCTCCCATGTTTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CAA 72 bp | TGGAGCTCACCCAGTGGCTCGTGTTCTGAAAACCGCTaGAAGTCCCACAGCTGCACCTTCAGAGTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WSSPSGSCSENR*KSHSCTFRVAL Trigger: CAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAACACGAGCCACTGGGTGAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 ENSMUST00000210746.2 |
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| CDS CAA 90 bp | GCTATTACGGGCACTGCCCAGGCCCACAGTTTCTTTATCCTTGGGTaGCTTCCTGTGGCGATGGCGGTGGCAATAGCAACAGATGACACA | + |
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Preference number: 6 (lower is better) Translates to: AITGTAQAHSFFILG*LPVAMAVAIATDDT Trigger: TGTGTCATCTGTTGCTATTGCCACCGCCATCGCCACAGGAAGCAACCCAAGGATAAAGAAACTGTGGGCCTGGGCAGTGCCCGTAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000105977.3 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CAA 90 bp | TCTGAAAACCGCTTGAAGTCCCACAGCTGCACCTTCAGAGTGGCTTaGGGCAGCTCTGCTGGTGGGACCAGAAAGCAGCATGTCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SENRLKSHSCTFRVA*GSSAGGTRKQHVSS Trigger: TGAAGAGACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS TCA 72 bp | GCTTCCTGTGGCGATGGCGGTGGCAATAGCAACAGATaGCACAGAGCAAACAGGAGACTAAGAGGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASCGDGGGNSNR*HRANRRLRGLQ Trigger: CTGGAGTCCTCTTAGTCTCCTGTTTGCTCTGTGTCATCTGTTGCTATTGCCACCGCCATCGCCACAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000105977.3 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 72 bp | CTGGTGGGACCAGAAAGCAGCATGTCTCTTCAAACATaGGAGAGAGCGTCCCTCGGTGCACCTTTGTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LVGPESSMSLQT*ERASLGAPLSH Trigger: ATGAGACAAAGGTGCACCGAGGGACGCTCTCTCCCATGTTTGAAGAGACATGCTGCTTTCTGGTCCCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 72 bp | CAGCTGCACCTTCAGAGTGGCTTTGGGCAGCTCTGCTaGTGGGACCAGAAAGCAGCATGTCTCTTCAAACAT | + |
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Preference number: 6 (lower is better) Translates to: QLHLQSGFGQLC*WDQKAACLFKH Trigger: ATGTTTGAAGAGACATGCTGCTTTCTGGTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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| CDS CCA 72 bp | AGGTTTCCAGCCTGCCTCAGGCCCACTCTAATCTCCTaGCTTCCAAAATCATACTCTAGTGACAGCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RFPACLRPTLIS*LPKSYSSDSRS Trigger: ACTCCTGCTGTCACTAGAGTATGATTTTGGAAGCCAGGAGATTAGAGTGGGCCTGAGGCAGGCTGGAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097939.9 ENSMUST00000105976.8 ENSMUST00000118276.8 ENSMUST00000122393.2 |
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