RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024743

Ensembl transcript IDs: ENSMUST00000073899.6, ENSMUST00000076968.11, ENSMUST00000169121.9, ENSMUST00000223586.2, ENSMUST00000224135.3, ENSMUST00000225452.3, ENSMUST00000235303.2, ENSMUST00000235479.2, ENSMUST00000235784.2, ENSMUST00000237366.2, ENSMUST00000237745.2

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGAGGTGCCCTGCCGAGCCTGACCCCGACCATAGGCCCGGGGGTTaGAGCCCGGTGCCGAGGCCGCGTGGGCCTGCAGCTGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: PRCPAEPDPDHRPGG*SPVPRPRGPAAGPG
Trigger: GCCTGGGCCAGCTGCAGGCCCACGCGGCCTCGGCACCGGGCTCCAACCCCCGGGCCTATGGTCGGGGTCAGGCTCGGCAGGGCACCTCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 90 bp CTGCCGAGCCTGACCCCGACCATAGGCCCGGGGGTTGGAGCCCGGTaGCGAGGCCGCGTGGGCCTGCAGCTGGCCCAGGCTCTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: LPSLTPTIGPGVGAR*RGRVGLQLAQALAG
Trigger: ACCAGCCAGAGCCTGGGCCAGCTGCAGGCCCACGCGGCCTCGGCACCGGGCTCCAACCCCCGGGCCTATGGTCGGGGTCAGGCTCGGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR TCA 90 bp GCCGCGTGGGCCTGCAGCTGGCCCAGGCTCTGGCTGGTGGTGGGCTaGCTGGGCTGCCGGCCCTGCTGGTTCTGGCTCAGCGGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: AAWACSWPRLWLVVG*LGCRPCWFWLSGCC
Trigger: GCAGCAGCCGCTGAGCCAGAACCAGCAGGGCCGGCAGCCCAGTCAGCCCACCACCAGCCAGAGCCTGGGCCAGCTGCAGGCCCACGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 90 bp CACGTGGTCCCAGCTGCCTGGGTTGGAGCGGCTGCGGCCCCCAGCTaGCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGACC +
Preference number: 1 (lower is better)
Translates to: HVVPAAWVGAAAAPS*PVLGAGRGALPSLT
Trigger: GGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp AGCTGCCTGGGTTGGAGCGGCTGCGGCCCCCAGCTGCCCGGTACTTaGAGCCGGCCGAGGTGCCCTGCCGAGCCTGACCCCGACCATAGG +
Preference number: 1 (lower is better)
Translates to: SCLGWSGCGPQLPGT*SRPRCPAEPDPDHR
Trigger: CCTATGGTCGGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 90 bp GGCTGCCGGCCCTGCTGGTTCTGGCTCAGCGGCTGCTGCAGGCTCTaGTGCCGCATCAGTGTGCGGGGTCGCTGGCATTTCGGCTCTCCC +
Preference number: 1 (lower is better)
Translates to: GCRPCWFWLSGCCRL*CRISVRGRWHFGSP
Trigger: GGGAGAGCCGAAATGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCCGCTGAGCCAGAACCAGCAGGGCCGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 90 bp TGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGCGGCCCCCAGCTGCCCGGTACTTGG +
Preference number: 1 (lower is better)
Translates to: CPSLGFESAPPRGPS*LGWSGCGPQLPGTW
Trigger: CCAAGTACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp AGCGGCTGCTGCAGGCTCTGCTGCCGCATCAGTGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGCGGAGCTGGGGATAGACTCAAGGGTA +
Preference number: 1 (lower is better)
Translates to: SGCCRLCCRISVRGR*HFGSPAELGIDSRV
Trigger: TACCCTTGAGTCTATCCCCAGCTCCGCGGGAGAGCCGAAATGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp AAGGATTTCATGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTGGAGCGGCTGCGGCCCCCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: KDFMSKPRFRICPTT*SQLPGLERLRPPAA
Trigger: GGCAGCTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACATGAAATCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp GAGGAACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTaGCCGGGCACTGGGGCTGTATTCACAGCCTTCCCTCCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: EERVSVLRSDSSCGV*PGTGAVFTAFPPAG
Trigger: GCCTGCAGGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp GTGGAGTCCTCGAAATTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAGCGGCCTCTCCCCGCCTTGCCACTG +
Preference number: 1 (lower is better)
Translates to: VESSKLDKLSFPAAR*LCTIRQRPLPALPL
Trigger: CAGTGGCAAGGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCGAGGACTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR CCA 90 bp CGAGACAGAGGAACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTaGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCCTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: RDRGTGLRSAVRLIV*RLAGHWGCIHSLPS
Trigger: GGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTTCCTCTGTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp CTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTaGGGCTGTATTCACAGCCTTCCCTCCTGCAGGCAACCTCTTGTC +
Preference number: 1 (lower is better)
Translates to: LRSAVRLIVWRLAGH*GCIHSLPSCRQPLV
Trigger: GACAAGAGGTTGCCTGCAGGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR TCA 90 bp GGGTGGGGGCTACAGAGACAGGCAAAGTGGGTGCCAGGAGGCAGCTaGAACAGCCATTTGCCCTGGTCCCCACTTCTTCTCAGCCGTCCA +
Preference number: 1 (lower is better)
Translates to: GWGLQRQAKWVPGGS*NSHLPWSPLLLSRP
Trigger: TGGACGGCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTTTCAGCTGCCTCCTGGCACCCACTTTGCCTGTCTCTGTAGCCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp CACAGTGAAGAGACAGATTGGCTCTGGCGGTCCCTAGAGGCTCTGTaGGGTAGGGTGGACTGGCAGGTGGGCCTTGCTTTCAGGCCTCAC +
Preference number: 1 (lower is better)
Translates to: HSEETDWLWRSLEAL*GRVDWQVGLAFRPH
Trigger: GTGAGGCCTGAAAGCAAGGCCCACCTGCCAGTCCACCCTACCCCACAGAGCCTCTAGGGACCGCCAGAGCCAATCTGTCTCTTCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp GCCTCACTGACAACTTTGCTCTGGGTAGCACCTTCAGAGCCCTCCTaGCTTGACCCCCTAGGTCAGGTGATGGTGGCCTCACAACCTCCC +
Preference number: 1 (lower is better)
Translates to: ASLTTLLWVAPSEPS*LDPLGQVMVASQPP
Trigger: GGGAGGTTGTGAGGCCACCATCACCTGACCTAGGGGGTCAAGGCAGGAGGGCTCTGAAGGTGCTACCCAGAGCAAAGTTGTCAGTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp GGAGAAGGGACGACAGCTTCTTTGGGTATGGCAACTTCAGACTCCTaGAATGCTCCCCGCTTCCTCTGCTTGCGTGGTGGGTGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: GEGTTASLGMATSDS*NAPRFLCLRGGWEG
Trigger: CCCCTCCCACCCACCACGCAAGCAGAGGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTCGTCCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp CTGTTCCCACACAGCCTCTGCAGGGAGTTGGGAGGGTCCCTTTCCTaGGGTTACACCCAGCTGGGCAAGGGAGTTGGGGATGGTCCTATT +
Preference number: 1 (lower is better)
Translates to: LFPHSLCRELGGSLS*GYTQLGKGVGDGPI
Trigger: AATAGGACCATCCCCAACTCCCTTGCCCAGCTGGGTGTAACCCCAGGAAAGGGACCCTCCCAACTCCCTGCAGAGGCTGTGTGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp TTGGGTATGGCAACTTCAGACTCCTGGAATGCTCCCCGCTTCCTCTaGTTGCGTGGTGGGTGGGAGGGGCAGAAAGAGCTGCTACTCTGG +
Preference number: 1 (lower is better)
Translates to: LGMATSDSWNAPRFL*LRGGWEGQKELLLW
Trigger: CCAGAGTAGCAGCTCTTTCTGCCCCTCCCACCCACCACGCAAGCAGAGGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp AGGGACGACAGCTTCTTTGGGTATGGCAACTTCAGACTCCTGGAATaGTCCCCGCTTCCTCTGCTTGCGTGGTGGGTGGGAGGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: RDDSFFGYGNFRLLE*SPLPLLAWWVGGAE
Trigger: TTCTGCCCCTCCCACCCACCACGCAAGCAGAGGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp TGCCAACTTTACACCTGCTGGTGCAGGTTGCTCGGGCCCCTCGGATaGCTTGGTGGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAG +
Preference number: 1 (lower is better)
Translates to: CQLYTCWCRLLGPLG*LGGSTQETEADGRK
Trigger: CTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCCACCAAGGCATCCGAGGGGCCCGAGCAACCTGCACCAGCAGGTGTAAAGTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp GTGAGCCCAGGCCCAAGGGACGACATTGCAGTAGAGAGTTGCTACTaGGGAATTGTGGGGGTGGGGGCTACAGAGACAGGCAAAGTGGGT +
Preference number: 1 (lower is better)
Translates to: VSPGPRDDIAVESCY*GIVGVGATETGKVG
Trigger: ACCCACTTTGCCTGTCTCTGTAGCCCCCACCCCCACAATTCCCCAGTAGCAACTCTCTACTGCAATGTCGTCCCTTGGGCCTGGGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp AGAGACAGGCAAAGTGGGTGCCAGGAGGCAGCTGAAACAGCCATTTaGCCTGGTCCCCACTTCTTCTCAGCCGTCCATACCCTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: RDRQSGCQEAAETAI*PGPHFFSAVHTLPL
Trigger: GAGAGGAAGGGTATGGACGGCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTTTCAGCTGCCTCCTGGCACCCACTTTGCCTGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp CTCCCACTCCCATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACCTTGTTCAGAGGGATGGACACCTCC +
Preference number: 1 (lower is better)
Translates to: LPLPSLHGFRSFQKV*IWVRSTLFRGMDTS
Trigger: GGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp TTCTACATTACCCTCTTCTGTTCCCACACAGCCTCTGCAGGGAGTTaGGAGGGTCCCTTTCCTGGGGTTACACCCAGCTGGGCAAGGGAG +
Preference number: 1 (lower is better)
Translates to: FYITLFCSHTASAGS*EGPFPGVTPSWARE
Trigger: CTCCCTTGCCCAGCTGGGTGTAACCCCAGGAAAGGGACCCTCCCAACTCCCTGCAGAGGCTGTGTGGGAACAGAAGAGGGTAATGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 90 bp CCTTGTTCAGAGGGATGGACACCTCCCCAATGGGGTCATTGCGGCTaGAACGGTCATAATCCAGGACCTGGAGGTAGAGGACCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: PCSEGWTPPQWGHCG*NGHNPGPGGRGPSA
Trigger: TGCAGAGGGTCCTCTACCTCCAGGTCCTGGATTATGACCGTTTCAGCCGCAATGACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp CTCCCATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTCAGAGGGATGGACACCTCCCCAATG +
Preference number: 1 (lower is better)
Translates to: LPSLHGFRSFQKVCI*VRSTLFRGMDTSPM
Trigger: CATTGGGGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp CTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTaGTCCGCTCTTCCAGGACAGGTAGATCTTGCCGATGACGTCGTT +
Preference number: 1 (lower is better)
Translates to: LPGTSDHVLPVFHFT*SALPGQVDLADDVV
Trigger: AACGACGTCATCGGCAAGATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 90 bp GAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTGGGAGGGACTTaGGGGAGAAGGACAGTGGTCTCTCTCAGGCACGTGAAGGGATGC +
Preference number: 1 (lower is better)
Translates to: ERPERPLEVVHLGGT*GRRTVVSLRHVKGC
Trigger: GCATCCCTTCACGTGCCTGAGAGAGACCACTGTCCTTCTCCCGCAAGTCCCTCCCAGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp CCAATCCCAGCTGTTGCTTCCCCTGGAAGAAGAGAGAGAGAGGGCTaGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATC +
Preference number: 1 (lower is better)
Translates to: PIPAVASPGRREREG*DPQRKQPRPYFFTI
Trigger: GATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCCCTCTCTCTCTCTTCTTCCAGGGGAAGCAACAGCTGGGATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp CTCAGACTACCTTTCTTTCCCCTGCCAGGACCTGGAAGGAGACATTaGCCCCAAGTCATAGAAGCTGAGCAGGTGATGGTGAGGCTGGAC +
Preference number: 1 (lower is better)
Translates to: LRLPFFPLPGPGRRH*PQVIEAEQVMVRLD
Trigger: GTCCAGCCTCACCATCACCTGCTCAGCTTCTATGACTTGGGGCCAATGTCTCCTTCCAGGTCCTGGCAGGGGAAAGAAAGGTAGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 90 bp CCCATGGAATTATGGGGTCCCCTTAGTGCCTATCTGAAGCAGATATaGTTGGCCTTCTGCAGTACCCTGAGAACTGGCAGGCCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: PMELWGPLSAYLKQI*LAFCSTLRTGRPAA
Trigger: GGCAGCTGGCCTGCCAGTTCTCAGGGTACTGCAGAAGGCCAATCATATCTGCTTCAGATAGGCACTAAGGGGACCCCATAATTCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp TTTCCAGACTTTCTACATTACCCTCTTCTGTTCCCACACAGCCTCTaGAGGGAGTTGGGAGGGTCCCTTTCCTGGGGTTACACCCAGCTG +
Preference number: 1 (lower is better)
Translates to: FPDFLHYPLLFPHSL*RELGGSLSWGYTQL
Trigger: CAGCTGGGTGTAACCCCAGGAAAGGGACCCTCCCAACTCCCTGCAGAGGCTGTGTGGGAACAGAAGAGGGTAATGTAGAAAGTCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp CCCAGTTGCCCTAACATCTTATGCCCAGCCTCTGTGTCATCCAGCTaGACCCTGTGCAAACCCACTCTGTTCTCCACCCACTGTTTGCAA +
Preference number: 1 (lower is better)
Translates to: PSCPNILCPASVSSS*TLCKPTLFSTHCLQ
Trigger: TTGCAAACAGTGGGTGGAGAACAGAGTGGGTTTGCACAGGGTGCAGCTGGATGACACAGAGGCTGGGCATAAGATGTTAGGGCAACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp ACAGCCAGGCGTGCCACACAGAACGTCTATTCAGACAGGGAACCCTaGCCAAGGGCTCACAATCTAAGAGACACCACACTCGCACATGTA +
Preference number: 1 (lower is better)
Translates to: TARRATQNVYSDREP*PRAHNLRDTTLAHV
Trigger: TACATGTGCGAGTGTGGTGTCTCTTAGATTGTGAGCCCTTGGGCAGGGTTCCCTGTCTGAATAGACGTTCTGTGTGGCACGCCTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp AGGCAACCTCTTGTCCCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGA +
Preference number: 1 (lower is better)
Translates to: RQPLVPLSVLVLLGS*VLQVRDIGKVILFR
Trigger: TCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 90 bp ACAAAGGGGTCACTAGTACCGCTGAAGTCCTTGGCTGGCAGCTCTTaGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTTGGAAGTTG +
Preference number: 1 (lower is better)
Translates to: TKGSLVPLKSLAGSS*AFMTFTVSVDSWKL
Trigger: CAACTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 90 bp CAGCACAGAGGGACGACAGGACTTAAGAGGGATCATTCTGGAGTCTaGTATTTCCAAAGGGAAGCCAGTTCTAGTCTCAGCAGAGGCGGG +
Preference number: 1 (lower is better)
Translates to: QHRGTTGLKRDHSGV*YFQREASSSLSRGG
Trigger: CCCGCCTCTGCTGAGACTAGAACTGGCTTCCCTTTGGAAATAGCAGACTCCAGAATGATCCCTCTTAAGTCCTGTCGTCCCTCTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp ACAGTAGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTaGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCG +
Preference number: 1 (lower is better)
Translates to: TVDTTQIHRATSPGL*STGYILSSVSRAQP
Trigger: CGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCTACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR GCA 90 bp GATATGATTGGCCTTCTGCAGTACCCTGAGAACTGGCAGGCCAGCTaGCCTGGACAGAGCAGGGAGTGGCTGGAAAATTATTGCTTCTTT +
Preference number: 1 (lower is better)
Translates to: DMIGLLQYPENWQAS*PGQSREWLENYCFF
Trigger: AAAGAAGCAATAATTTTCCAGCCACTCCCTGCTCTGTCCAGGGCAGCTGGCCTGCCAGTTCTCAGGGTACTGCAGAAGGCCAATCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 90 bp GCCCTGGACAGAGCAGGGAGTGGCTGGAAAATTATTGCTTCTTTGTaGATAGAGGACATTGAGAGCACAGCAAAGGGCATGGCTTGCCAG +
Preference number: 1 (lower is better)
Translates to: ALDRAGSGWKIIASL*IEDIESTAKGMACQ
Trigger: CTGGCAAGCCATGCCCTTTGCTGTGCTCTCAATGTCCTCTATTCACAAAGAAGCAATAATTTTCCAGCCACTCCCTGCTCTGTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 90 bp TGTCAAGGTGCCAGTCAGGGTAGAACTGTATTTATGGTCCCCAACTaGTACCATAGATGTGGTGTTCTGGTGCCACCTGGTGGTAGAATT +
Preference number: 1 (lower is better)
Translates to: CQGASQGRTVFMVPN*YHRCGVLVPPGGRI
Trigger: AATTCTACCACCAGGTGGCACCAGAACACCACATCTATGGTAGCAGTTGGGGACCATAAATACAGTTCTACCCTGACTGGCACCTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp AGATGTGGTGTTCTGGTGCCACCTGGTGGTAGAATTAGGGTATGTTaGGCTCAAGTCTCTGAATTGGTTTTGAGGCTCTTTCACCAGCTG +
Preference number: 1 (lower is better)
Translates to: RCGVLVPPGGRIRVC*AQVSELVLRLFHQL
Trigger: CAGCTGGTGAAAGAGCCTCAAAACCAATTCAGAGACTTGAGCCCAACATACCCTAATTCTACCACCAGGTGGCACCAGAACACCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 90 bp AGGGAGTGGCTGGAAAATTATTGCTTCTTTGTGAATAGAGGACATTaGGAGCACAGCAAAGGGCATGGCTTGCCAGAGCCACATACAGGA +
Preference number: 1 (lower is better)
Translates to: REWLENYCFFVNRGH*EHSKGHGLPEPHTG
Trigger: TCCTGTATGTGGCTCTGGCAAGCCATGCCCTTTGCTGTGCTCTCAATGTCCTCTATTCACAAAGAAGCAATAATTTTCCAGCCACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp GAACTGTATTTATGGTCCCCAACTGCTACCATAGATGTGGTGTTCTaGTGCCACCTGGTGGTAGAATTAGGGTATGTTGGGCTCAAGTCT +
Preference number: 1 (lower is better)
Translates to: ELYLWSPTATIDVVF*CHLVVELGYVGLKS
Trigger: AGACTTGAGCCCAACATACCCTAATTCTACCACCAGGTGGCACCAGAACACCACATCTATGGTAGCAGTTGGGGACCATAAATACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 90 bp ACAGGACCCAGAACATGGGAAGTGGATGACTTCATTAGAAACAGATaGGAGCAGCTCAGGATGGAGCGTCAAGCATGTTCGAATTATCCT +
Preference number: 1 (lower is better)
Translates to: TGPRTWEVDDFIRNR*EQLRMERQACSNYP
Trigger: AGGATAATTCGAACATGCTTGACGCTCCATCCTGAGCTGCTCCCATCTGTTTCTAATGAAGTCATCCACTTCCCATGTTCTGGGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp CGGGGGTTGGAGCCCGGTGCCGAGGCCGCGTGGGCCTGCAGCTGGCCCAGGCTCCCGCCTTGCCACTGCTaGCCGGCTCGCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RGLEPGAEAAWACSWPRLPPCHC*PARWGQ
Trigger: CTGCCCCCAGCGAGCCGGGCAGCAGTGGCAAGGCGG...GAGCCTGGGCCAGCTGCAGGCCCACGCGGCCTCGGCACCGGGCTCCAACCCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR CCA 90 bp CCCCAGCTGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGACCCCCCCAGCTGCCTGGGTTaGAGCGGCTGCGGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: PQLPGTWSRPRCPAEPDPPSCLG*SGCGPQ
Trigger: CTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGG...GGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGGGG
76% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR TCA 90 bp AGCTGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGACCCCGACCGGCCACTTTGGCGCCTaGCAGGAGCGTGCCACACGA +
Preference number: 2 (lower is better)
Translates to: SCPVLGAGRGALPSLTPTGHFGA*QERATR
Trigger: TCGTGTGGCACGCTCCTGTCAGGCGCCAAAGTGGCC...GGTCGGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR GCA 90 bp TCAGCTGGTGCCACTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCTCCCCGCCTTGCCACTaGTGCCCGGCTCGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SAGATGPQAAGDERSCPSSPPCH*CPARWG
Trigger: CCCCCAGCGAGCCGGGCAGCAGTGGCAAGGCGGGGA...GGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAGTGGCACCAGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR GCA 90 bp TCAGCTGGTGCCACTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCCTGGGCTGCCGGCCCTaGTGGTTCTGGCTCAGCGGC +
Preference number: 2 (lower is better)
Translates to: SAGATGPQAAGDERSCPSLGCRP*WFWLSG
Trigger: GCCGCTGAGCCAGAACCAGCAGGGCCGGCAGCCCAG...GGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAGTGGCACCAGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp GAACTGGATTCGGCCCAGGTTCTCTCGGCTGCAGCCCTCGTGGGCCTCATCCTCTGGAGCCGGCCGAGGTaGCCTGCCGAGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: ELDSAQVLSAAALVGLILWSRPR*PAEPDP
Trigger: GGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCA...GAGGATGAGGCCCACGAGGGCTGCAGCCGAGAGAACCTGGGCCGAATCCAGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCCTTCCCTCCCTGGGTTGGAGCGGCTaGGGCCCCCAGCTGCCCGGT +
Preference number: 2 (lower is better)
Translates to: LIVWRLAGHWGCIHSLPSLGWSG*GPQLPG
Trigger: ACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAG...GGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GCAGGCTCTGCTGCCGCATCAGTGTGCGGGGTCGCTGGCATTTCGGCTCTCCCGCGGCCCTGCTGGTTCTaGCTCAGCGGCTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AGSAAASVCGVAGISALPRPCWF*LSGCCR
Trigger: CCTGCAGCAGCCGCTGAGCCAGAACCAGCAGGGCCG...CGGGAGAGCCGAAATGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCCCCAGCTGCCTGGGTTaGAGCGGCTGCGGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: AVRLIVWRLAGHWGCIHSPSCLG*SGCGPQ
Trigger: CTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGG...GCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCGAGGCCGCGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LGHRLPGTSDHVLPVFHFEAAWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACGCGGCCTC...GAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCTGGTGGTGGGCTGACTaGGCTGCCGGCCCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: AVRLIVWRLAGHWGCIHSWWWAD*AAGPAG
Trigger: ACCAGCAGGGCCGGCAGCCCAGTCAGCCCACCACCA...GCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCCTGGGCTGCCGGCCCTaGTGGTTCTGGCTCAGCGGC +
Preference number: 2 (lower is better)
Translates to: LGHRLPGTSDHVLPVFHFLGCRP*WFWLSG
Trigger: GCCGCTGAGCCAGAACCAGCAGGGCCGGCAGCCCAG...GAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp TCAGGTCCACCTTGTTCAGAGGGATGGACACCTCCCCAATGGGGTCATTGCGGCGCTGCGGCCCCCAGCTaGCCGGTACTTGGAGCCGGC +
Preference number: 2 (lower is better)
Translates to: SGPPCSEGWTPPQWGHCGAAAPS*PVLGAG
Trigger: GCCGGCTCCAAGTACCGGGCAGCTGGGGGCCGCAGC...GCCGCAATGACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp GGTCCGAGACAGAGGAACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTGGCGCCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: GPRQRNGSPFCGQTHRVAPRGPS*LGWSGC
Trigger: GCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGG...CGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTTCCTCTGTCTCGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAGAAAACGGGGGCTATaGCCACCTGGCGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PDDQAVAKRLGLPLLGPKRKRGL*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATAGCCCCCGTTTTCT...TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR GCA 90 bp GCTGGCAGCTCTTGGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTTGGAAGGCTGCGGCCCCCAGCTaGCCGGTACTTGGAGCCGGC +
Preference number: 2 (lower is better)
Translates to: AGSSWAFMTFTVSVDSWKAAAPS*PVLGAG
Trigger: GCCGGCTCCAAGTACCGGGCAGCTGGGGGCCGCAGC...CTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp ACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTGGCCTCTCCCCGCCTTaGCACTGCTGCCCGGCTCGC +
Preference number: 2 (lower is better)
Translates to: TGCRGRAIMSFQCFTSPGGLSPP*HCCPAR
Trigger: GCGAGCCGGGCAGCAGTGGCAAGGCGGGGAGAGGCC...ACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR CCA 90 bp CTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCCCAGGCTCTGGCTGGTaGTGGGCTGACTGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LGHRLPGTSDHVLPVFHFPGSGW*WADWAA
Trigger: GGCAGCCCAGTCAGCCCACCACCAGCCAGAGCCTGG...GAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GAACTGGATTCGGCCCAGGTTCTCTCGGCTGCAGCCCTCGTGGGCCTCATCCTCGTCAGACTCATCGTGTaGCGTCTGGCCGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: ELDSAQVLSAAALVGLILVRLIV*RLAGHW
Trigger: CCAGTGCCCGGCCAGACGCCACACGATGAGTCTGAC...GAGGATGAGGCCCACGAGGGCTGCAGCCGAGAGAACCTGGGCCGAATCCAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCGGGGCTATGCCCACCTaGCGGGCCTCTGGAGGGATC +
Preference number: 2 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGGAMPT*RASGGI
Trigger: GATCCCTCCAGAGGCCCGCCAGGTGGGCATAGCCCC...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp GGCTGGCAGCTCTTGGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTTGGAAGCCCCGCCGCCGCAGTaGCCACTTTGGCGCCTGACA +
Preference number: 2 (lower is better)
Translates to: GWQLLGLHDLHGECGLLEAPPPQ*PLWRLT
Trigger: TGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGC...TTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR CCA 90 bp CCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTGTCCTCTCCGGGTGGTaGCACCGGCGCCGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: PGTSDHVLPVFHFTWSALVLSGW*HRRRLL
Trigger: GAGAAGCCGGCGCCGGTGCCACCACCCGGAGAGGAC...AAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR CCA 90 bp CCCGGGGAGAGCATGAGCATCTCGCTGGTAAGGGAGTTGACGAGGTCCGAGACATTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAG +
Preference number: 2 (lower is better)
Translates to: PGESMSISLVRELTRSETFPAAR*LCTIRQ
Trigger: CTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAA...TGTCTCGGACCTCGTCAACTCCCTTACCAGCGAGATGCTCATGCTCTCCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR TCA 90 bp CAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTCAGAGGGATTGGCTGGTGGTGGGCTaGCTGGGCTGCCGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: QILPEGLHLGQVHLVQRDWLVVG*LGCRPC
Trigger: GCAGGGCCGGCAGCCCAGTCAGCCCACCACCAGCCA...ATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGTTCCCACACAGCCTCTaGAGGGAGTTGGGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGFPHSL*RELGGS
Trigger: GGACCCTCCCAACTCCCTGCAGAGGCTGTGTGGGAA...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp CCCGGGGAGAGCATGAGCATCTCGCTGGTAAGGGAGTTGACGAGGTCCGAGACAGCTGCCGCATCAGTGTaGGGGGTCGCTGGCATTTCG +
Preference number: 2 (lower is better)
Translates to: PGESMSISLVRELTRSETAAASV*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACACTGATGCGGCAGC...TGTCTCGGACCTCGTCAACTCCCTTACCAGCGAGATGCTCATGCTCTCCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp GAAAGCCCTAATACCAGGGATAGCACCACCATCCGGCCTTCCAGGAAGGATTTCGAGGCCGCGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: ESPNTRDSTTIRPSRKDFEAAWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACGCGGCCTC...GAAATCCTTCCTGGAAGGCCGGATGGTGGTGCTATCCCTGGTATTAGGGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTCAGAGGGATCTGGGTTGGAGCGGCTaGGGCCCCCAGCTGCCCGGT +
Preference number: 2 (lower is better)
Translates to: QILPEGLHLGQVHLVQRDLGWSG*GPQLPG
Trigger: ACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAG...ATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCCACCTGGCGGGCCTCTaGAGGGATCTGCCCATCTGG +
Preference number: 2 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTHLAGL*RDLPIW
Trigger: CCAGATGGGCAGATCCCTCCAGAGGCCCGCCAGGTG...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp CCTGTTCCGAAAGCCCTAATACCAGGGATAGCACCACCATCCGGCCTTCCAGGACAGCTGCCCGGTACTTaGAGCCGGCCGAGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: PVPKALIPGIAPPSGLPGQLPGT*SRPRCP
Trigger: AGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTG...TCCTGGAAGGCCGGATGGTGGTGCTATCCCTGGTATTAGGGCTTTCGGAACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp ATCCTCCTCAGAACCCGGGGAGAGCATGAGCATCTCGCTGGTAAGGGAGTTGACCAGCTGCCCGGTACTTaGAGCCGGCCGAGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: ILLRTRGEHEHLAGKGVDQLPGT*SRPRCP
Trigger: AGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTG...GTCAACTCCCTTACCAGCGAGATGCTCATGCTCTCCCCGGGTTCTGAGGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp CCAGGAAGGATTTCATGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTGGTGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: PGRISCPSLGFESAPPRGVVPAA*VGAAAA
Trigger: GGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCAC...ACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACATGAAATCCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GAGGAACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCGCGTTCTGGTTCTGCTaGGTTCCTGGGTTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: EERVSVLRSDSSCGVWPGAFWFC*VPGFCR
Trigger: CCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC...GCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR TCA 90 bp CATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATTGGCTGGTGGTGGGCTaGCTGGGCTGCCGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: HVLPVFHFTWSALPGQVDWLVVG*LGCRPC
Trigger: GCAGGGCCGGCAGCCCAGTCAGCCCACCACCAGCCA...ATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR TCA 90 bp GCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCCGAAATTGGACAAGTTaGGCTTCCCTGCGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: AVRLIVWRLAGHWGCIHSRNWTS*ASLRPG
Trigger: ACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCG...GCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR GCA 90 bp CCTGTTCCGAAAGCCCTAATACCAGGGATAGCACCACCATCCGGCCTTCCAGGAGGCTGCTGCAGGCTCTaGTGCCGCATCAGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: PVPKALIPGIAPPSGLPGGCCRL*CRISVR
Trigger: CCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCC...TCCTGGAAGGCCGGATGGTGGTGCTATCCCTGGTATTAGGGCTTTCGGAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCTGGAGCCGGCCGAGGTaGCCTGCCGAGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: LVLLGSWVLQVRDIGKVIWSRPR*PAEPDP
Trigger: GGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCA...GATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp CTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCCACAGCCTTCCCTCCTaGAGGCAACCTCTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: LGHRLPGTSDHVLPVFHFHSLPS*RQPLVP
Trigger: GGGGACAAGAGGTTGCCTGCAGGAGGGAAGGCTGTG...GAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCTCTGGTACCCCTCCCTaGCTGAGCCCTCGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SRTLEHRLYTILSVQGPASGTPP*LSPRGL
Trigger: GAGACCCCGAGGGCTCAGCCAGGGAGGGGTACCAGA...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp ATCTTGACAAAGGGGTCACTAGTACCGCTGAAGTCCTTGGCTGGCAGCTCTTGGGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: ILTKGSLVPLKSLAGSSWVVPAA*VGAAAA
Trigger: GGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCAC...CCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGTCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATCTTGGCGTCCTCTCCGGGTaGTGGCACCGGCGCCGGCTT +
Preference number: 2 (lower is better)
Translates to: VLPVFHFTWSALPGQVDLGVLSG*WHRRRL
Trigger: AAGCCGGCGCCGGTGCCACCACCCGGAGAGGACGCC...AAGATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR GCA 90 bp GGGGACAGAGGGTATGTGACCCTCTTCACTTCAGAGTGGGGCAGGGCCCATGGACTGGCAGGTGGGCCTTaGTTTCAGGCCTCACTGACA +
Preference number: 2 (lower is better)
Translates to: GDRGYVTLFTSEWGRAHGLAGGP*FQASLT
Trigger: TGTCAGTGAGGCCTGAAAGCAAGGCCCACCTGCCAG...TCCATGGGCCCTGCCCCACTCTGAAGTGAAGAGGGTCACATACCCTCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp ACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTGCTGCCGCATCAGTGTaGGGGGTCGCTGGCATTTCG +
Preference number: 2 (lower is better)
Translates to: TGCRGRAIMSFQCFTSPGAAASV*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACACTGATGCGGCAGC...ACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGATGGGTCTCCCCTCACCATaGCAGGGGTGCCGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GGVCWGRWNLYSSYTEKMGLPSP*QGCRAG
Trigger: CCCAGCCCGGCACCCCTGCCATGGTGAGGGGAGACC...CATCTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCGGCCCAGTAGAGTTCTaGTACCCCTCCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTGPVEF*YPSLAE
Trigger: CTCAGCCAGGGAGGGGTACCAGAACTCTACTGGGCC...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCCCTGAGCTGGACTCATaGGGTGGGGCTGGTACTTCC +
Preference number: 2 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTPELDS*GGAGTS
Trigger: GGAAGTACCAGCCCCACCCCATGAGTCCAGCTCAGG...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGGCTATGCCCACCTaGCGGGCCTCTGGAGGGATC +
Preference number: 2 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPGAMPT*RASGGI
Trigger: GATCCCTCCAGAGGCCCGCCAGGTGGGCATAGCCCC...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCCTGATGACCAGGCCGTaGCCAAACGCCTCGGCCTTC +
Preference number: 2 (lower is better)
Translates to: SRTLEHRLYTILSVQGPALMTRP*PNASAF
Trigger: GAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAG...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp CCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: PGTSDHVLPVFHFTWSALICPTT*SQLPGL
Trigger: CAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGAT...AAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp ACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATAGGTCTCCCCTCACCATaGCAGGGGTGCCGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TQHKYTGPHLQDSGAQAIGLPSP*QGCRAG
Trigger: CCCAGCCCGGCACCCCTGCCATGGTGAGGGGAGACC...TATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp CAGTCCCTCCAATCCCAGCTGTTGCTTCCCCTGGAAGAAGAGAGAGAGAGGGCTGGCCCAGTAGAGTTCTaGTACCCCTCCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QSLQSQLLLPLEEERERAGPVEF*YPSLAE
Trigger: CTCAGCCAGGGAGGGGTACCAGAACTCTACTGGGCC...AGCCCTCTCTCTCTCTTCTTCCAGGGGAAGCAACAGCTGGGATTGGAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCCCTGAGCTGGACTCATaGGGTGGGGCTGGTACTTCC +
Preference number: 2 (lower is better)
Translates to: SRTLEHRLYTILSVQGPAPELDS*GGAGTS
Trigger: GGAAGTACCAGCCCCACCCCATGAGTCCAGCTCAGG...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGAACAGCCATTTGCCCTaGTCCCCACTTCTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGNSHLP*SPLLLS
Trigger: GCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTT...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGTATGCAAAGAAAAGGTaGAGGTGTCGGGGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGYAKKR*RCRGKG
Trigger: CCCCTTGCCCCGACACCTCCACCTTTTCTTTGCATA...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp TCAGGTCCACCTTGTTCAGAGGGATGGACACCTCCCCAATGGGGTCATTGCGGCTGGCCGTGGACAGGGTaGAGTCCTCGAAACACGACA +
Preference number: 2 (lower is better)
Translates to: SGPPCSEGWTPPQWGHCGWPWTG*SPRNTT
Trigger: TGTCGTGTTTCGAGGACTCCACCCTGTCCACGGCCA...GCCGCAATGACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp CCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCGTCTGGCCGGGCACTaGGGCTGTATTCACAGCCTT +
Preference number: 2 (lower is better)
Translates to: PGTSDHVLPVFHFTWSALRLAGH*GCIHSL
Trigger: AAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACG...AAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CAA 90 bp AACTTTACACCTGCTGGTGCAGGTTGCTCGGGCCCCTCGGATGCCTaGGTGGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAGGATG +
Preference number: 2 (lower is better)
Translates to: NFTPAGAGCSGPSDA*VEALRRLRQMEGRM
Trigger: CATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCCACCAAGGCATCCGAGGGGCCCGAGCAACCTGCACCAGCAGGTGTAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR TCA 90 bp GGTGGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGCCTTCCCTGTGGCCTTaGCCTCTACCTGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: GGGVCWGRWNLYSSYTEKPSLWP*PLPDPA
Trigger: GGCTGGGTCAGGTAGAGGTCAAGGCCACAGGGAAGG...CTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp CATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATGGCTGCTGCAGGCTCTaGTGCCGCATCAGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: HVLPVFHFTWSALPGQVDGCCRL*CRISVR
Trigger: CCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCC...ATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp GATGGACACCTCCCCAATGGGGTCATTGCGGCTGAAACGGTCATAATCCAGGACCACAGCCTTCCCTCCTaGAGGCAACCTCTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: DGHLPNGVIAAETVIIQDHSLPS*RQPLVP
Trigger: GGGGACAAGAGGTTGCCTGCAGGAGGGAAGGCTGTG...GTCCTGGATTATGACCGTTTCAGCCGCAATGACCCCATTGGGGAGGTGTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAAGGCAAAGCAGGGAATaGCTCCCAAGCCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPRQSRE*LPSPHP
Trigger: GGGGTGGGGGCTTGGGAGCCATTCCCTGCTTTGCCT...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp GTAGATCTTGCCGATGACGTCGTTGCGGCTGAGCTTGTCTTTGTCCATGACAGTAGTGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: VDLADDVVAAELVFVHDSSVRGR*HFGSPA
Trigger: CGCGGGAGAGCCGAAATGCCAGCGACCCCGCACACT...ACTGTCATGGACAAAGACAAGCTCAGCCGCAACGACGTCATCGGCAAGATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTGTCAGACTCATCGTGTaGCGTCTGGCCGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: AWLQILPEGLHLGQVHLVVRLIV*RLAGHW
Trigger: CCAGTGCCCGGCCAGACGCCACACGATGAGTCTGAC...AACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp TCAGGTCCACCTTGTTCAGAGGGATGGACACCTCCCCAATGGGGTCATTGCGGCTGGCCGTGGACAGGGTaGAGTCCTCGAAATTGGACA +
Preference number: 2 (lower is better)
Translates to: SGPPCSEGWTPPQWGHCGWPWTG*SPRNWT
Trigger: TGTCCAATTTCGAGGACTCCACCCTGTCCACGGCCA...GCCGCAATGACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR TCA 90 bp GGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAGGATGGCAGCGATTTCTCTAAAGTGGTAGGGGCATaGTGGGGAGCCAGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: GSTQETEADGRKDGSDFSKVVGA*WGARPW
Trigger: CCAAGGCCTGGCTCCCCATCATGCCCCTACCACTTT...AGAGAAATCGCTGCCATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR TCA 90 bp ACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCAAAGTGGTAGGGGCATaGTGGGGAGCCAGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: TSPGLWSTGYILSSVSRAKVVGA*WGARPW
Trigger: CCAAGGCCTGGCTCCCCATCATGCCCCTACCACTTT...GGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR TCA 90 bp GAGGAGAGCCCAGCATCCAGAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTGGTGCCTACAAAGTGTaGGCCCAGGCCCAAGGGACG +
Preference number: 2 (lower is better)
Translates to: EESPASRKARETFRSSASGAYKV*AQAQGT
Trigger: CGTCCCTTGGGCCTGGGCTCACACTTTGTAGGCACC...AGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTCTGGATGCTGGGCTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR TCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGCTTTGGGGCAGCTGGTaGATTGTAGGGATTAGTCTT +
Preference number: 2 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGLWGSW*IVGISL
Trigger: AAGACTAATCCCTACAATTCACCAGCTGCCCCAAAG...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp GAGGAGAGCCCAGCATCCAGAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTAGAAAACGGGGGCTATaGCCACCTGGCGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: EESPASRKARETFRSSASRKRGL*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATAGCCCCCGTTTTCT...AGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTCTGGATGCTGGGCTCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp GTAGATCTTGCCGATGACGTCGTTGCGGCTGAGCTTGTCTTTGTCCATGACAGTTGCTGCAGGCTCTGCTaGCGCATCAGTGTGCGGGGT +
Preference number: 2 (lower is better)
Translates to: VDLADDVVAAELVFVHDSCCRLC*RISVRG
Trigger: ACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCA...ACTGTCATGGACAAAGACAAGCTCAGCCGCAACGACGTCATCGGCAAGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAAGTGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: GFLGFAGQGYWQSHPVPKSVRGR*HFGSPA
Trigger: CGCGGGAGAGCCGAAATGCCAGCGACCCCGCACACT...TTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp CGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCCCTCAGCTTCTCCGTaGGTATGTCGAAGGCGAAAG +
Preference number: 2 (lower is better)
Translates to: RGRAIMSFQCFTSPGPLFPSASP*VCRRRK
Trigger: CTTTCGCCTTCGACATACCCACGGAGAAGCTGAGGG...GAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CAA 90 bp CCTCTTGTCCCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: PLVPLSVLVLLGSWV*QVRDIGKVILFRKP
Trigger: GGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR TCA 90 bp ATCTTGACAAAGGGGTCACTAGTACCGCTGAAGTCCTTGGCTGGCAGCTCTTGGAACCTCTTGTCCCCCTaGGCGTTCTGGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ILTKGSLVPLKSLAGSSWNLLSP*AFWFCW
Trigger: CCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTT...CCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGTCAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp GGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGATGTCTCCACCCACTGTTTaGAAGGTCTGGCTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: GGVCWGRWNLYSSYTEKMSPPTV*KVWLAP
Trigger: GGGGGCCAGCCAGACCTTGCAAACAGTGGGTGGAGA...CATCTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATCCTTCAGAGCCCTCCTaGCTTGACCCCCTAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYPSEPS*LDPLGQ
Trigger: CTGACCTAGGGGGTCAAGGCAGGAGGGCTCTGAAGG...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp CATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATCCTCGGTTTCGAATCTaGCCCACCACGTGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: HVLPVFHFTWSALPGQVDPRFRI*PTTWSQ
Trigger: CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGG...ATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp TCAGGTCCACCTTGTTCAGAGGGATGGACACCTCCCCAATGGGGTCATTGCGGCTGGGTTCCTGGGTTTTaGAGGTCAGGGATATTGGCA +
Preference number: 2 (lower is better)
Translates to: SGPPCSEGWTPPQWGHCGWVPGF*RSGILA
Trigger: TGCCAATATCCCTGACCTGCAAAACCCAGGAACCCA...GCCGCAATGACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp ACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATAAGGCAAAGCAGGGAATaGCTCCCAAGCCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: TQHKYTGPHLQDSGAQAIRQSRE*LPSPHP
Trigger: GGGGTGGGGGCTTGGGAGCCATTCCCTGCTTTGCCT...TATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAAGGGATCTGCCCATCTaGCTCTTGAGCTCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPRDLPI*LLSSPP
Trigger: TGGGGGAGAGCTCAAGAGCCAGATGGGCAGATCCCT...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp GGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGATGCCTCTGCTTGCGTGGTaGGTGGGAGGGGCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: GGVCWGRWNLYSSYTEKMPLLAW*VGGAER
Trigger: TCTTTCTGCCCCTCCCACCCACCACGCAAGCAGAGG...CATCTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CAA 90 bp TGGCAGCTCTTGGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTaGGAAGTTGTAGCCAACACTGAACTGGATTCGGCCCAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: WQLLGLHDLHGECGL*EVVANTELDSAQVL
Trigger: GAGAACCTGGGCCGAATCCAGTTCAGTGTTGGCTACAACTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CAA 90 bp GACAAAGGGGTCACTAGTACCGCTGAAGTCCTTGGCTGGCAGCTCTaGGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: DKGVTSTAEVLGWQL*GLHDLHGECGLLEV
Trigger: AACTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp ACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCACCATGGCAGGGGTaGCGGGCTGGGCATTGTGCA +
Preference number: 2 (lower is better)
Translates to: TQIHRATSPGLWSTGYILSPWQG*RAGHCA
Trigger: TGCACAATGCCCAGCCCGGCACCCCTGCCATGGTGA...TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR GCA 90 bp TCTTTGTCACGGTCTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACAGCGGCCAGGTGGCTCTaGACCATCCGCCAGCGGCCT +
Preference number: 2 (lower is better)
Translates to: SLSRSSFSLPACLYTSATAARWL*TIRQRP
Trigger: AGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGC...TGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGACAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR-3UTR CCA 90 bp ACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTACTGATGACCAGGCCGTaGCCAAACGCCTCGGCCTTC +
Preference number: 2 (lower is better)
Translates to: TQIHRATSPGLWSTGYILLMTRP*PNASAF
Trigger: GAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAG...TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp TCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATCTTGCCGAGCGTTCTGGTTCTGCTaGGTTCCTGGGTTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: SSVSLHLVRSSRTGRSCRAFWFC*VPGFCR
Trigger: CCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC...TCGGCAAGATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp TCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATCTTGCCGAGCTGAAGTCCTTGGCTaGCAGCTCTTGGGCCTTCAT +
Preference number: 2 (lower is better)
Translates to: SSVSLHLVRSSRTGRSCRAEVLG*QLLGLH
Trigger: ATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGC...TCGGCAAGATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp CGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RGRAIMSFQCFTSPGPLFTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...GAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR TCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGGTTACACAGAGAAGATaGTCACAAGAAAAGCTACCT +
Preference number: 2 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGVTQRR*SQEKLP
Trigger: AGGTAGCTTTTCTTGTGATCATCTTCTCTGTGTAAC...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp GAGGAGAGCCCAGCATCCAGAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTGCAAAGGGCATGGCTTaGCAGAGCCACATACAGGAG +
Preference number: 2 (lower is better)
Translates to: EESPASRKARETFRSSASAKGMA*QSHIQE
Trigger: CTCCTGTATGTGGCTCTGGCAAGCCATGCCCTTTGC...AGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTCTGGATGCTGGGCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp CAGTCCCTCCAATCCCAGCTGTTGCTTCCCCTGGAAGAAGAGAGAGAGAGGGCTGTGTGCTGGGGCAGGTaGAATTTGTATAGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: QSLQSQLLLPLEEERERAVCWGR*NLYSSY
Trigger: GTAACTGCTATACAAATTCCACCTGCCCCAGCACAC...AGCCCTCTCTCTCTCTTCTTCCAGGGGAAGCAACAGCTGGGATTGGAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CAA 90 bp GCGTTCTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCCGAAAGCCCTAATACCAGGGATAGC +
Preference number: 2 (lower is better)
Translates to: AFWFCWVPGFCRSGI*AKSSCSESPNTRDS
Trigger: GCTATCCCTGGTATTAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR TCA 90 bp CGTCAAGCATGTTCGAATTATCCTTCAGCTGTCTTTCTCAGAGAAGGAGAGGAGCCCAGGGAGTGTGGGTaGCTTGCCCAAGATCCTAGG +
Preference number: 2 (lower is better)
Translates to: RQACSNYPSAVFLREGEEPRECG*LAQDPR
Trigger: CCTAGGATCTTGGGCAAGTCACCCACACTCCCTGGG...CTCCTCTCCTTCTCTGAGAAAGACAGCTGAAGGATAATTCGAACATGCTTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp GAGGAGAGCCCAGCATCCAGAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTAGGGTCTGGCACCTCTaGTGTGCTGAACCAACTATG +
Preference number: 2 (lower is better)
Translates to: EESPASRKARETFRSSASRVWHL*CAEPTM
Trigger: CATAGTTGGTTCAGCACAGCAGAGGTGCCAGACCCT...AGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTCTGGATGCTGGGCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp TCACGGTCTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACACCTTCATGCTGCAGGCTCTGCTaGCGCATCAGTGTGCGGGGT +
Preference number: 2 (lower is better)
Translates to: SRSSFSLPACLYTSATPSCCRLC*RISVRG
Trigger: ACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCA...TGAAGGTGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp TGGAAGAAGAGAGAGAGAGGGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTAACATCTCCAGGACTCTaGAGCACAGGCTATATACTA +
Preference number: 2 (lower is better)
Translates to: WKKRERGLGPTEETAKALTSPGL*STGYIL
Trigger: TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGT...TAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCCCTCTCTCTCTCTTCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp CGTCAAGCATGTTCGAATTATCCTTCAGCTGTCTTTCTCAGAGAAGGAGAGGAGGCCAATCAGCACTGCTaGTCCCAGGGCGATAGGGAG +
Preference number: 2 (lower is better)
Translates to: RQACSNYPSAVFLREGEEANQHC*SQGDRE
Trigger: CTCCCTATCGCCCTGGGACCAGCAGTGCTGATTGGC...CTCCTCTCCTTCTCTGAGAAAGACAGCTGAAGGATAATTCGAACATGCTTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp TTAATCAGAACAGGCCTTGCCACAAAAAGCAGGGCCCATTCCCACAAAAATATGGGAGGGTCCCTTTCCTaGGGTTACACCCAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LIRTGLATKSRAHSHKNMGGSLS*GYTQLG
Trigger: GCCCAGCTGGGTGTAACCCCAGGAAAGGGACCCTCC...CATATTTTTGTGGGAATGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp TTAATCAGAACAGGCCTTGCCACAAAAAGCAGGGCCCATTCCCACAAAAATATGGCCTCTGCAGGGAGTTaGGAGGGTCCCTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LIRTGLATKSRAHSHKNMASAGS*EGPFPG
Trigger: CCCAGGAAAGGGACCCTCCCAACTCCCTGCAGAGGC...CATATTTTTGTGGGAATGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR TCA 90 bp CGTCAAGCATGTTCGAATTATCCTTCAGCTGTCTTTCTCAGAGAAGGAGAGGAGGGGGTTAGGAATGCCTaGGAAGGATGGGAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: RQACSNYPSAVFLREGEEGVRNA*EGWEWC
Trigger: GCACCACTCCCATCCTTCTCAGGCATTCCTAACCCC...CTCCTCTCCTTCTCTGAGAAAGACAGCTGAAGGATAATTCGAACATGCTTGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR TCA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTAGAGCCCTCCTGCCTTaGCCCCCTAGGTCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACRALLP*PPRSGD
Trigger: ATCACCTGACCTAGGGGGTCAAGGCAGGAGGGCTCT...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp ACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTAGCTGGACTCATGGGGTaGGGCTGGTACTTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: TQIHRATSPGLWSTGYILAGLMG*GWYFLE
Trigger: TTCTAGGAAGTACCAGCCCCACCCCATGAGTCCAGC...TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CCA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTTGCTTGCGTGGTGGGTaGGAGGGGCAGAAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACCLRGG*EGQKEL
Trigger: CAGCTCTTTCTGCCCCTCCCACCCACCACGCAAGCA...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR TCA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTGCCTTGACCTCTACCTaGCCCAGCCCTACTTCATCC +
Preference number: 2 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACALTST*PSPTSS
Trigger: GGATGAAGTAGGGCTGGGTCAGGTAGAGGTCAAGGC...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp GACACACAGACACACACAGGACCCAGAACATGGGAAGTGGATGACTTCATTAGACACACGGTGAGTAGGTaGCTACAAAGTGTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: DTQTHTGPRTWEVDDFIRHTVSR*LQSVSP
Trigger: TGGGCTCACACTTTGTAGGCACCTACTCACCGTGTG...TCTAATGAAGTCATCCACTTCCCATGTTCTGGGTCCTGTGTGTGTCTGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp CGTCAAGCATGTTCGAATTATCCTTCAGCTGTCTTTCTCAGAGAAGGAGAGGAGGCTGGACTCATGGGGTaGGGCTGGTACTTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: RQACSNYPSAVFLREGEEAGLMG*GWYFLE
Trigger: TTCTAGGAAGTACCAGCCCCACCCCATGAGTCCAGC...CTCCTCTCCTTCTCTGAGAAAGACAGCTGAAGGATAATTCGAACATGCTTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp TTAATCAGAACAGGCCTTGCCACAAAAAGCAGGGCCCATTCCCACAAAAATATGAGGGATCTGCCCATCTaGCTCTTGAGCTCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: LIRTGLATKSRAHSHKNMRDLPI*LLSSPP
Trigger: TGGGGGAGAGCTCAAGAGCCAGATGGGCAGATCCCT...CATATTTTTGTGGGAATGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATCAGCTTCTTTGGGTATaGCAACTTCAGACTCCTGGA +
Preference number: 2 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYQLLWV*QLQTPG
Trigger: TCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTG...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATGGCTCTTTCACCAGCTaGGTCTTTTCAATACAGCAC +
Preference number: 2 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYGSFTS*VFSIQH
Trigger: GTGCTGTATTGAAAAGACCCAGCTGGTGAAAGAGCC...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp TCACGGTCTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACACCTTCATCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 2 (lower is better)
Translates to: SRSSFSLPACLYTSATPSSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...TGAAGGTGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CCA 90 bp GACACACAGACACACACAGGACCCAGAACATGGGAAGTGGATGACTTCATTAGAATAGATGTGGTGTTCTaGTGCCACCTGGTGGTAGAA +
Preference number: 2 (lower is better)
Translates to: DTQTHTGPRTWEVDDFIRIDVVF*CHLVVE
Trigger: TTCTACCACCAGGTGGCACCAGAACACCACATCTAT...TCTAATGAAGTCATCCACTTCCCATGTTCTGGGTCCTGTGTGTGTCTGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp ACTACTTCTGAGATGACTTTAGGTCTGACCTGGGGCATGCAATATTCTCTACTTAAGATCCTAGGACAGTaGTGGCAGAGCTCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: TTSEMTLGLTWGMQYSLLKILGQ*WQSSGA
Trigger: GGCACCAGAGCTCTGCCACCACTGTCCTAGGATCTT...AAGTAGAGAATATTGCATGCCCCAGGTCAGACCTAAAGTCATCTCAGAAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CAA 90 bp GGTGGTAGAATTAGGGTATGTTGGGCTCAAGTCTCTGAATTGGTTTaGAGGCTCTTTCACCAGCTGGGTCTTTTCAATACAGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: GGRIRVCWAQVSELV*RLFHQLGLFNTAQR
Trigger: CCTCTGTGCTGTATTGAAAAGACCCAGCTGGTGAAAGAGCCTCAAAACCAATTCAGAGACTTGAGCCCAACATACCCTAATTCTACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp TCTTTGTCACGGTCTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACATTGGTCTCCAGTTTGTaGTTCTTGTCGGGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: SLSRSSFSLPACLYTSATLVSSL*FLSGSR
Trigger: CCTGCTACCCGACAAGAAGCACAAACTGGAGACCAA...TGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGACAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR GCA 90 bp GACACACAGACACACACAGGACCCAGAACATGGGAAGTGGATGACTTCATTAGACAAAGAGGAAAATTTTaGTGGCTTAGAGGGTGCATA +
Preference number: 2 (lower is better)
Translates to: DTQTHTGPRTWEVDDFIRQRGKF*WLRGCI
Trigger: TATGCACCCTCTAAGCCAGCAAAATTTTCCTCTTTG...TCTAATGAAGTCATCCACTTCCCATGTTCTGGGTCCTGTGTGTGTCTGTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CCA 90 bp CGTCAAGCATGTTCGAATTATCCTTCAGCTGTCTTTCTCAGAGAAGGAGAGGAGAGAGCAGGGAGTGGCTaGAAAATTATTGCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: RQACSNYPSAVFLREGEERAGSG*KIIASL
Trigger: CAAAGAAGCAATAATTTTCCAGCCACTCCCTGCTCT...CTCCTCTCCTTCTCTGAGAAAGACAGCTGAAGGATAATTCGAACATGCTTGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR GCA 90 bp TTTATAAAACACTTGCGCTCAAGGACTCAAACACAATACAAACAGCGCCACCAGGATCATTCTGGAGTCTaGTATTTCCAAAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: FIKHLRSRTQTQYKQRHQDHSGV*YFQREA
Trigger: GGCTTCCCTTTGGAAATAGCAGACTCCAGAATGATC...CTGGTGGCGCTGTTTGTATTGTGTTTGAGTCCTTGAGCGCAAGTGTTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp GGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTCCGGGTaGTGGCACCGGCGCCGGCTTCTCCCCGAGCCGGCC +
Preference number: 3 (lower is better)
Translates to: GSPAASQGVLSG*WHRRRLLPEPA
Trigger: GGCCGGCTCGGGGAGAAGCCGGCGCCGGTGCCACCACCCGGAGAGGACGCCTTGAGAAGCGGCGGGGCTGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR GCA 72 bp CTGACCCCGACCATAGGCCCGGGGGTTGGAGCCCGGTaGCGAGGCCGCGTGGGCCTGCAGCTGGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: LTPTIGPGVGAR*RGRVGLQLAQA
Trigger: AGCCTGGGCCAGCTGCAGGCCCACGCGGCCTCGGCACCGGGCTCCAACCCCCGGGCCTATGGTCGGGGTCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 72 bp CCAGCTGCCTGGGTTGGAGCGGCTGCGGCCCCCAGCTaGCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCG +
Preference number: 3 (lower is better)
Translates to: PAAWVGAAAAPS*PVLGAGRGALP
Trigger: CGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp CCTGCCGAGCCTGACCCCGACCATAGGCCCGGGGGTTaGAGCCCGGTGCCGAGGCCGCGTGGGCCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PAEPDPDHRPGG*SPVPRPRGPAA
Trigger: AGCTGCAGGCCCACGCGGCCTCGGCACCGGGCTCCAACCCCCGGGCCTATGGTCGGGGTCAGGCTCGGCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp AGCCCCGCCGCTTCTCAAGGCGTCCTCTCCGGGTGGTaGCACCGGCGCCGGCTTCTCCCCGAGCCGGCCTTC +
Preference number: 3 (lower is better)
Translates to: SPAASQGVLSGW*HRRRLLPEPAF
Trigger: GAAGGCCGGCTCGGGGAGAAGCCGGCGCCGGTGCCACCACCCGGAGAGGACGCCTTGAGAAGCGGCGGGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR TCA 72 bp CGCCAGCCCCGCCGCCGCAGTGGCCACTTTGGCGCCTaGCAGGAGCGTGCCACACGACAATGGAGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: RQPRRRSGHFGA*QERATRQWRGP
Trigger: GGGCCCCCTCCATTGTCGTGTGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR GCA 72 bp CTCGGTTTCGAATCTGCCCCACCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGCGGCCCCCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: LGFESAPPRGPS*LGWSGCGPQLP
Trigger: GGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp GCTCCACCGCCAGCCCCGCCGCCGCAGTGGCCACTTTaGCGCCTGACAGGAGCGTGCCACACGACAATGGAG +
Preference number: 3 (lower is better)
Translates to: APPPAPPPQWPL*RLTGACHTTME
Trigger: CTCCATTGTCGTGTGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCGGTGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR GCA 72 bp CCCTGCTGGTTCTGGCTCAGCGGCTGCTGCAGGCTCTaGTGCCGCATCAGTGTGCGGGGTCGCTGGCATTTC +
Preference number: 3 (lower is better)
Translates to: PCWFWLSGCCRL*CRISVRGRWHF
Trigger: GAAATGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCCGCTGAGCCAGAACCAGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp TGCAGGCTCTGCTGCCGCATCAGTGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGCGGAGCTGGGGATAGAC +
Preference number: 3 (lower is better)
Translates to: CRLCCRISVRGR*HFGSPAELGID
Trigger: GTCTATCCCCAGCTCCGCGGGAGAGCCGAAATGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp TCGAAATTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAGCGGCCTCTCCCCGCC +
Preference number: 3 (lower is better)
Translates to: SKLDKLSFPAAR*LCTIRQRPLPA
Trigger: GGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR CCA 72 bp GGAACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTaGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGC +
Preference number: 3 (lower is better)
Translates to: GTGLRSAVRLIV*RLAGHWGCIHS
Trigger: GCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGGCCAGGCCTTGGCCCTaGGAGCCTCCCTTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWARPWP*EPPLAP
Trigger: TGGGGCCAAGGGAGGCTCCAAGGGCCAAGGCCTGGC...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CAA 90 bp TGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGCGGGCCTCTGGAGGGATCTGATGGGGAGCCAGGCCTaGGCCCTTGGAGCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: CLKENGGYAHLAGLWRDLMGSQA*ALGASL
Trigger: AAGGGAGGCTCCAAGGGCCAAGGCCTGGCTCCCCAT...CAGATCCCTCCAGAGGCCCGCCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CAA 90 bp CCAGGAAGGATTTCATGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTGGTCCAGCTGCCCGGTACTaGGAGCCGGCCGAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: PGRISCPSLGFESAPPRGPAARY*EPAEVP
Trigger: GGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGG...ACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACATGAAATCCTTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp TCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATCTTGCCGACGGCCTCTCCCCGCCTaGCCACTGCTGCCCGGCTCG +
Preference number: 3 (lower is better)
Translates to: SSVSLHLVRSSRTGRSCRRPLPA*PLLPGS
Trigger: CGAGCCGGGCAGCAGTGGCAAGGCGGGGAGAGGCCG...TCGGCAAGATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR CCA 72 bp AAAGAAAACGGGGGCTATGCCCACCTGGCGGGCCTCTaGAGGGATCTGCCCATCTGGCTCTTGAGCTCTCCC +
Preference number: 3 (lower is better)
Translates to: KENGGYAHLAGL*RDLPIWLLSSP
Trigger: GGGAGAGCTCAAGAGCCAGATGGGCAGATCCCTCCAGAGGCCCGCCAGGTGGGCATAGCCCCCGTTTTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR CCA 72 bp CACAGCCTCTGCAGGGAGTTGGGAGGGTCCCTTTCCTaGGGTTACACCCAGCTGGGCAAGGGAGTTGGGGAT +
Preference number: 3 (lower is better)
Translates to: HSLCRELGGSLS*GYTQLGKGVGD
Trigger: ATCCCCAACTCCCTTGCCCAGCTGGGTGTAACCCCAGGAAAGGGACCCTCCCAACTCCCTGCAGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp GTCTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTaGCCGGGCACTGGGGCTGTATTCACAGCCTTCCCT +
Preference number: 3 (lower is better)
Translates to: VSVLRSDSSCGV*PGTGAVFTAFP
Trigger: AGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp GGTGGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGGCCAGGCCTTGGCCCTaGGAGCCTCCCTTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: GGGVCWGRWNLYSSYTEKARPWP*EPPLAP
Trigger: TGGGGCCAAGGGAGGCTCCAAGGGCCAAGGCCTGGC...CTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CAA 90 bp CATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATCCAGCTGCCCGGTACTaGGAGCCGGCCGAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: HVLPVFHFTWSALPGQVDPAARY*EPAEVP
Trigger: GGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGG...ATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp TCAGCTGGTGCCACTGGGCCACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCACCTTGGTCTCCAGTTaGTGCTTCTTGTCGGGTAGC +
Preference number: 3 (lower is better)
Translates to: SAGATGPQAAGDERSCPSTLVSS*CFLSGS
Trigger: GCTACCCGACAAGAAGCACAAACTGGAGACCAAGGT...GGAAGGACATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAGTGGCACCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 72 bp GCAACTTCAGACTCCTGGAATGCTCCCCGCTTCCTCTaGTTGCGTGGTGGGTGGGAGGGGCAGAAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: ATSDSWNAPRFL*LRGGWEGQKEL
Trigger: CAGCTCTTTCTGCCCCTCCCACCCACCACGCAAGCAGAGGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp TACACCTGCTGGTGCAGGTTGCTCGGGCCCCTCGGATaGCTTGGTGGAAGCACTCAGGAGACTGAGGCAGAT +
Preference number: 3 (lower is better)
Translates to: YTCWCRLLGPLG*LGGSTQETEAD
Trigger: ATCTGCCTCAGTCTCCTGAGTGCTTCCACCAAGGCATCCGAGGGGCCCGAGCAACCTGCACCAGCAGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp CTCCCCAGTCCCTCCAATCCCAGCTGTTGCTTCCCCTaGAAGAAGAGAGAGAGAGGGCTGGGACCCACAGAG +
Preference number: 3 (lower is better)
Translates to: LPSPSNPSCCFP*KKRERGLGPTE
Trigger: CTCTGTGGGTCCCAGCCCTCTCTCTCTCTTCTTCCAGGGGAAGCAACAGCTGGGATTGGAGGGACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp GAGCAGCTCCCCTCGGCTCCCACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGT +
Preference number: 3 (lower is better)
Translates to: EQLPSAPTPIAA*LQILPEGLHLG
Trigger: ACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGAGCCGAGGGGAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp GGCCCAAGGGACGACATTGCAGTAGAGAGTTGCTACTaGGGAATTGTGGGGGTGGGGGCTACAGAGACAGGC +
Preference number: 3 (lower is better)
Translates to: GPRDDIAVESCY*GIVGVGATETG
Trigger: GCCTGTCTCTGTAGCCCCCACCCCCACAATTCCCCAGTAGCAACTCTCTACTGCAATGTCGTCCCTTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp AGTGTGGGTGACTTGCCCAAGATCCTAGGACAGTGGTaGCAGAGCTCTGGTGCCCTCCTCACCCTCAAGTCC +
Preference number: 3 (lower is better)
Translates to: SVGDLPKILGQW*QSSGALLTLKS
Trigger: GGACTTGAGGGTGAGGAGGGCACCAGAGCTCTGCCACCACTGTCCTAGGATCTTGGGCAAGTCACCCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp GGGCCTTGCTTTCAGGCCTCACTGACAACTTTGCTCTaGGTAGCACCTTCAGAGCCCTCCTGCCTTGACCCC +
Preference number: 3 (lower is better)
Translates to: GPCFQASLTTLL*VAPSEPSCLDP
Trigger: GGGGTCAAGGCAGGAGGGCTCTGAAGGTGCTACCCAGAGCAAAGTTGTCAGTGAGGCCTGAAAGCAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CAA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAATGGGGAGCCAGGCCTaGGCCCTTGGAGCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPMGSQA*ALGASL
Trigger: AAGGGAGGCTCCAAGGGCCAAGGCCTGGCTCCCCAT...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR-3UTR CAA 90 bp ACAGGCTGCCGGGGACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTGGTTCGCTGGTAAGGGAGTaGACGAGGTCCGAGACAGAG +
Preference number: 3 (lower is better)
Translates to: TGCRGRAIMSFQCFTSPGSLVRE*TRSETE
Trigger: CTCTGTCTCGGACCTCGTCAACTCCCTTACCAGCGA...ACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGCAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp CAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTCAGAGGGATGTACCGCTGAAGTCCTaGGCTGGCAGCTCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: QILPEGLHLGQVHLVQRDVPLKS*AGSSWA
Trigger: GGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTAC...ATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp GCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTGTACCGCTGAAGTCCTaGGCTGGCAGCTCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: AWLQILPEGLHLGQVHLVVPLKS*AGSSWA
Trigger: GGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTAC...AACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR TCA 72 bp GCCCCTCGGATGCCTTGGTGGAAGCACTCAGGAGACTaGGGCAGATGGAAGGAAGGATGGCAGCGATTTCTC +
Preference number: 3 (lower is better)
Translates to: APRMPWWKHSGD*GRWKEGWQRFL
Trigger: GAGAAATCGCTGCCATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCCACCAAGGCATCCGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp CAAAGTGGGTGCCAGGAGGCAGCTGAAACAGCCATTTaGCCTGGTCCCCACTTCTTCTCAGCCGTCCATACC +
Preference number: 3 (lower is better)
Translates to: QSGCQEAAETAI*PGPHFFSAVHT
Trigger: GGTATGGACGGCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTTTCAGCTGCCTCCTGGCACCCACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp ACAACTTTGCTCTGGGTAGCACCTTCAGAGCCCTCCTaGCTTGACCCCCTAGGTCAGGTGATGGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: TTLLWVAPSEPS*LDPLGQVMVAS
Trigger: TGAGGCCACCATCACCTGACCTAGGGGGTCAAGGCAGGAGGGCTCTGAAGGTGCTACCCAGAGCAAAGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp AGAGGCGGGGAGAAGGGACGACAGCTTCTTTGGGTATaGCAACTTCAGACTCCTGGAATGCTCCCCGCTTCC +
Preference number: 3 (lower is better)
Translates to: RGGEKGRQLLWV*QLQTPGMLPAS
Trigger: GGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTCGTCCCTTCTCCCCGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp CTCAGCAGAGGCGGGGAGAAGGGACGACAGCTTCTTTaGGTATGGCAACTTCAGACTCCTGGAATGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LSRGGEKGRQLL*VWQLQTPGMLP
Trigger: GGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTCGTCCCTTCTCCCCGCCTCTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp TGTCAGATGACGCTCATAAAGGGGGTGGGGACACAGTaGAGAGACAGATTGGCTCTGGCGGTCCCTAGAGGC +
Preference number: 3 (lower is better)
Translates to: CQMTLIKGVGTQ*RDRLALAVPRG
Trigger: GCCTCTAGGGACCGCCAGAGCCAATCTGTCTCTTCACTGTGTCCCCACCCCCTTTATGAGCGTCATCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp ACCTGGAAGGAGACATTGGCCCCAAGTCATAGAAGCTaGGCAGGTGATGGTGAGGCTGGACTCCAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: TWKETLAPSHRS*AGDGEAGLQGR
Trigger: CCTCCCTTGGAGTCCAGCCTCACCATCACCTGCTCAGCTTCTATGACTTGGGGCCAATGTCTCCTTCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp GAGGGATGGACACCTCCCCAATGGGGTCATTGCGGCTaGAACGGTCATAATCCAGGACCTGGAGGTAGAGGA +
Preference number: 3 (lower is better)
Translates to: EGWTPPQWGHCG*NGHNPGPGGRG
Trigger: TCCTCTACCTCCAGGTCCTGGATTATGACCGTTTCAGCCGCAATGACCCCATTGGGGAGGTGTCCATCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp ACGACAGCTTCTTTGGGTATGGCAACTTCAGACTCCTaGAATGCTCCCCGCTTCCTCTGCTTGCGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: TTASLGMATSDS*NAPRFLCLRGG
Trigger: CCCACCACGCAAGCAGAGGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp GACAAAGGGGTCACTAGTACCGCTGAAGTCCTTGGCTaGCAGCTCTTGGGCCTTCATGACCTTCACGGTGAG +
Preference number: 3 (lower is better)
Translates to: DKGVTSTAEVLG*QLLGLHDLHGE
Trigger: CTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp GCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTTCGCTGGTAAGGGAGTaGACGAGGTCCGAGACAGAG +
Preference number: 3 (lower is better)
Translates to: AWLQILPEGLHLGQVHLVSLVRE*TRSETE
Trigger: CTCTGTCTCGGACCTCGTCAACTCCCTTACCAGCGA...AACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR TCA 72 bp TCCTCTCCTACCTTCCCTGTGGCCTTGACCTCTACCTaGCCCAGCCCTACTTCATCCTCACGAAACTCTGCT +
Preference number: 3 (lower is better)
Translates to: SSPTFPVALTST*PSPTSSSRNSA
Trigger: AGCAGAGTTTCGTGAGGATGAAGTAGGGCTGGGTCAGGTAGAGGTCAAGGCCACAGGGAAGGTAGGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp CCAGAGTGTGGAGCAGATGCCAATTTGACTGCAAAATaGGATTTGGAAAGGTGGGGGTCCCTGGGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: PECGADANLTAK*DLERWGSLGEG
Trigger: CCCCTCGCCCAGGGACCCCCACCTTTCCAAATCTCATTTTGCAGTCAAATTGGCATCTGCTCCACACTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp CCTAACATCTTATGCCCAGCCTCTGTGTCATCCAGCTaGACCCTGTGCAAACCCACTCTGTTCTCCACCCAC +
Preference number: 3 (lower is better)
Translates to: PNILCPASVSSS*TLCKPTLFSTH
Trigger: GTGGGTGGAGAACAGAGTGGGTTTGCACAGGGTGCAGCTGGATGACACAGAGGCTGGGCATAAGATGTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp CCATTTCCATGTTCCCCCAGTTGCCCTAACATCTTATaGCCAGCCTCTGTGTCATCCAGCTGCACCCTGTGC +
Preference number: 3 (lower is better)
Translates to: PFPCSPSCPNIL*PASVSSSCTLC
Trigger: GCACAGGGTGCAGCTGGATGACACAGAGGCTGGGCATAAGATGTTAGGGCAACTGGGGGAACATGGAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp GAGAGACCTTTAGAAGTAGTGCATCTGGGAGGGACTTaGGGGAGAAGGACAGTGGTCTCTCTCAGGCACGTG +
Preference number: 3 (lower is better)
Translates to: ERPLEVVHLGGT*GRRTVVSLRHV
Trigger: CACGTGCCTGAGAGAGACCACTGTCCTTCTCCCGCAAGTCCCTCCCAGATGCACTACTTCTAAAGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp CCATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACCTTGTTCAGAGGGATG +
Preference number: 3 (lower is better)
Translates to: PSLHGFRSFQKV*IWVRSTLFRGM
Trigger: CATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp CCTTTCTTTCCCCTGCCAGGACCTGGAAGGAGACATTaGCCCCAAGTCATAGAAGCTGAGCAGGTGATGGTG +
Preference number: 3 (lower is better)
Translates to: PFFPLPGPGRRH*PQVIEAEQVMV
Trigger: CACCATCACCTGCTCAGCTTCTATGACTTGGGGCCAATGTCTCCTTCCAGGTCCTGGCAGGGGAAAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp TCACTAGTACCGCTGAAGTCCTTGGCTGGCAGCTCTTaGGCCTTCATGACCTTCACGGTGAGTGTGGACTCT +
Preference number: 3 (lower is better)
Translates to: SLVPLKSLAGSS*AFMTFTVSVDS
Trigger: AGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CCA 72 bp CTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTCAGAGGGATGGACACC +
Preference number: 3 (lower is better)
Translates to: LHGFRSFQKVCI*VRSTLFRGMDT
Trigger: GGTGTCCATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR GCA 72 bp TTTCTACATTACCCTCTTCTGTTCCCACACAGCCTCTaGAGGGAGTTGGGAGGGTCCCTTTCCTGGGGTTAC +
Preference number: 3 (lower is better)
Translates to: FLHYPLLFPHSL*RELGGSLSWGY
Trigger: GTAACCCCAGGAAAGGGACCCTCCCAACTCCCTGCAGAGGCTGTGTGGGAACAGAAGAGGGTAATGTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp TTATGCCCAGCCTCTGTGTCATCCAGCTGCACCCTGTaGAAACCCACTCTGTTCTCCACCCACTGTTTGCAA +
Preference number: 3 (lower is better)
Translates to: LCPASVSSSCTL*KPTLFSTHCLQ
Trigger: TTGCAAACAGTGGGTGGAGAACAGAGTGGGTTTGCACAGGGTGCAGCTGGATGACACAGAGGCTGGGCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp CTTGTCCCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATC +
Preference number: 3 (lower is better)
Translates to: LVPLSVLVLLGS*VLQVRDIGKVI
Trigger: GATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp GACACACAGACACACACAGGACCCAGAACATGGGAAGTGGATGACTTCATTAGATTCTCCACCCACTGTTaGCAAGGTCTGGCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: DTQTHTGPRTWEVDDFIRFSTHC*QGLAGP
Trigger: GGGGCCAGCCAGACCTTGCAAACAGTGGGTGGAGAA...TCTAATGAAGTCATCCACTTCCCATGTTCTGGGTCCTGTGTGTGTCTGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp ACGAGCGATCATGTCCTTCCAGTGTTTCACTTCACCTaGTCCGCTCTTCCAGGACAGGTAGATCTTGCCGAT +
Preference number: 3 (lower is better)
Translates to: TSDHVLPVFHFT*SALPGQVDLAD
Trigger: ATCGGCAAGATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp GGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAGGATGGCAGCGATTTCTCTAGCTGGGCAAGGGAGTaGGGGATGGTCCTATTTAAA +
Preference number: 3 (lower is better)
Translates to: GSTQETEADGRKDGSDFSSWARE*GMVLFK
Trigger: TTTAAATAGGACCATCCCCAACTCCCTTGCCCAGCT...AGAGAAATCGCTGCCATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CAA 90 bp ATCTTGACAAAGGGGTCACTAGTACCGCTGAAGTCCTTGGCTGGCAGCTCTTGGTGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCC +
Preference number: 3 (lower is better)
Translates to: ILTKGSLVPLKSLAGSSWCRSGI*AKSSCS
Trigger: GGAACAGGATGACTTTGCCAATATCCCTGACCTGCA...CCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGTCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR TCA 72 bp GAGGTCTTGGCGATCTCAGGGAGATCCCACTACTTCTaGGATGACTTTAGGTCTGACCTGGGGCATGCAATA +
Preference number: 3 (lower is better)
Translates to: EVLAISGRSHYF*DDFRSDLGHAI
Trigger: TATTGCATGCCCCAGGTCAGACCTAAAGTCATCTCAGAAGTAGTGGGATCTCCCTGAGATCGCCAAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp TTATGGGGTCCCCTTAGTGCCTATCTGAAGCAGATATaGTTGGCCTTCTGCAGTACCCTGAGAACTGGCAGG +
Preference number: 3 (lower is better)
Translates to: LWGPLSAYLKQI*LAFCSTLRTGR
Trigger: CCTGCCAGTTCTCAGGGTACTGCAGAAGGCCAATCATATCTGCTTCAGATAGGCACTAAGGGGACCCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp ATCCAAGCCAGAGTGTGGAGCAGATGCCAATTTGACTaGAAAATGAGATTTGGAAAGGTGGGGGTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: IQARVWSRCQFD*KMRFGKVGVPG
Trigger: CCCAGGGACCCCCACCTTTCCAAATCTCATTTTGCAGTCAAATTGGCATCTGCTCCACACTCTGGCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp GGGACGACAGGACTTAAGAGGGATCATTCTGGAGTCTaGTATTTCCAAAGGGAAGCCAGTTCTAGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: GTTGLKRDHSGV*YFQREASSSLS
Trigger: GCTGAGACTAGAACTGGCTTCCCTTTGGAAATAGCAGACTCCAGAATGATCCCTCTTAAGTCCTGTCGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp TTATGGTCCCCAACTGCTACCATAGATGTGGTGTTCTaGTGCCACCTGGTGGTAGAATTAGGGTATGTTGGG +
Preference number: 3 (lower is better)
Translates to: LWSPTATIDVVF*CHLVVELGYVG
Trigger: CCCAACATACCCTAATTCTACCACCAGGTGGCACCAGAACACCACATCTATGGTAGCAGTTGGGGACCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CAA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTAGCAAAGGGCATGGCTaGCCAGAGCCACATACAGGA +
Preference number: 3 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACSKGHG*PEPHTG
Trigger: TCCTGTATGTGGCTCTGGCAAGCCATGCCCTTTGCT...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp CTATATCCAAGCCAGAGTGTGGAGCAGATGCCAATTTaGCTGCAAAATGAGATTTGGAAAGGTGGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: LYPSQSVEQMPI*LQNEIWKGGGP
Trigger: GGGACCCCCACCTTTCCAAATCTCATTTTGCAGTCAAATTGGCATCTGCTCCACACTCTGGCTTGGATATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp ACAATAGATTGGAGAAAGGCCACAGATTCAGCAGTCTaGCCTAGAGCTCAGACTACCTTTCTTTCCCCTGCC +
Preference number: 3 (lower is better)
Translates to: TIDWRKATDSAV*PRAQTTFLSPA
Trigger: GGCAGGGGAAAGAAAGGTAGTCTGAGCTCTAGGTCAGACTGCTGAATCTGTGGCCTTTCTCCAATCTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR GCA 72 bp ATTCTGAAGATGGACATTTATTACCACAGCCAGGCGTaGCACACAGAACGTCTATTCAGACAGGGAACCCTG +
Preference number: 3 (lower is better)
Translates to: ILKMDIYYHSQA*HTERLFRQGTL
Trigger: CAGGGTTCCCTGTCTGAATAGACGTTCTGTGTGGCACGCCTGGCTGTGGTAATAAATGTCCATCTTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CAA 90 bp TCACGGTCTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACACCTTCAGGTGAGTGTGGACTCTaGGAAGTTGTAGCCAACACT +
Preference number: 3 (lower is better)
Translates to: SRSSFSLPACLYTSATPSGECGL*EVVANT
Trigger: AGTGTTGGCTACAACTTCCAAGAGTCCACACTCACC...TGAAGGTGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp CTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACACCTTCACATAGGGCGGCTGAGCTTGTCTTaGTCCATGACAGTGATGATG +
Preference number: 3 (lower is better)
Translates to: LLFLYPLVFIHQPHLHIGRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAAGACAAGCTCAGCCG...CCCTATGTGAAGGTGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR-3UTR CAA 90 bp CTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACACCTTCACATAGGGGTGGAGTCCTCGAAATaGGACAAGTTGAGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: LLFLYPLVFIHQPHLHIGVESSK*DKLSFP
Trigger: AGGGAAGCTCAACTTGTCCAATTTCGAGGACTCCAC...CCCTATGTGAAGGTGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
3UTR GCA 72 bp AGGGCAGGAGCTGTACCTCTGAGCTATACCCTAGCCTaGATACACCTTTTAAAAGGGATGTCTAAACTACAC +
Preference number: 3 (lower is better)
Translates to: RAGAVPLSYTLA*IHLLKGMSKLH
Trigger: GTGTAGTTTAGACATCCCTTTTAAAAGGTGTATGCAGGCTAGGGTATAGCTCAGAGGTACAGCTCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CCA 72 bp GTTCTGGTGCCACCTGGTGGTAGAATTAGGGTATGTTaGGCTCAAGTCTCTGAATTGGTTTTGAGGCTCTTT +
Preference number: 3 (lower is better)
Translates to: VLVPPGGRIRVC*AQVSELVLRLF
Trigger: AAAGAGCCTCAAAACCAATTCAGAGACTTGAGCCCAACATACCCTAATTCTACCACCAGGTGGCACCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR-3UTR CAA 90 bp TCTTTGTCACGGTCTTCTTTTTCTCTACCCGCTTGTCTTTATACATCAGCCACAAAGGCGAAAGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 3 (lower is better)
Translates to: SLSRSSFSLPACLYTSATKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCTTTCGCCTT...TGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR TCA 72 bp TTAGGGTATGTTGGGCTCAAGTCTCTGAATTGGTTTTaGGGCTCTTTCACCAGCTGGGTCTTTTCAATACAG +
Preference number: 3 (lower is better)
Translates to: LGYVGLKSLNWF*GSFTSWVFSIQ
Trigger: CTGTATTGAAAAGACCCAGCTGGTGAAAGAGCCTCAAAACCAATTCAGAGACTTGAGCCCAACATACCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR TCA 72 bp CTATTTGTTTTACAATGGAATTATTCACTCTACGAATaGTTCACCTACTACATAAGGGATTCCTCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: LFVLQWNYSLYE*FTYYIRDSSRS
Trigger: GGACCTGGAGGAATCCCTTATGTAGTAGGTGAATCATTCGTAGAGTGAATAATTCCATTGTAAAACAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp GGAGCCGGCCGAGGTGCCCTGCCGAGCCTGACCCCGACCATAGGCCCGGGGGTTCCCACGCCCCGAGTCTaGCGTGCCCACCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GAGRGALPSLTPTIGPGVPTPRV*RAHRLQ
Trigger: TTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGG...AACCCCCGGGCCTATGGTCGGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CAA 72 bp CGCTCCACCGCCAGCCCCGCCGCCGCAGTGGCCACTTaGGCGCCTGACAGGAGCGTGCCACACGACAATGGA +
Preference number: 4 (lower is better)
Translates to: RSTASPAAAVAT*APDRSVPHDNG
Trigger: TCCATTGTCGTGTGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCGGTGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235303.2
CDS-3UTR GCA 90 bp GACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAAGGGGTCCCCGCCTTGCCACTaGTGCCCGGCTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DQAVAKRLGLPLLGPKKGSPPCH*CPARWG
Trigger: CCCCCAGCGAGCCGGGCAGCAGTGGCAAGGCGGGGA...CCCCTTTTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAAGGGGGGCCTCTCCCCGCCTTaGCACTGCTGCCCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: DQAVAKRLGLPLLGPKKGGLSPP*HCCPAR
Trigger: GCGAGCCGGGCAGCAGTGGCAAGGCGGGGAGAGGCC...CCCCTTTTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp TGGCTCAGCGGCTGCTGCAGGCTCTGCTGCCGCATCAGTGTGCGGGGTCGCTGGCCCACGCCCCGAGTCTaGCGTGCCCACCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: WLSGCCRLCCRISVRGRWPTPRV*RAHRLQ
Trigger: TTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGG...CCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCCGCTGAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR TCA 90 bp TGGGCTGACTGGGCTGCCGGCCCTGCTGGTTCTGGCTCAGCGGCTGCTGCAGGCTTGCCCAGTTTGCGCTaGCACCAGTGGCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: WADWAAGPAGSGSAAAAGLPSLR*HQWHRP
Trigger: CGGCCTGTGCCACTGGTGTCAGCGCAAACTGGGCAA...GCCTGCAGCAGCCGCTGAGCCAGAACCAGCAGGGCCGGCAGCCCAGTCAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR CCA 90 bp CCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAGGCGTCCTCTCCGGGTaGTGGCACCGGCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PDDQAVAKRLGLPLLGPKGVLSG*WHRRRL
Trigger: AAGCCGGCGCCGGTGCCACCACCCGGAGAGGACGCC...TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp AACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGGACATCGCGGGTAGGTaGCCCTGGGCTGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NGSPFCGQTHRVASGRALDIAGR*PWAGRL
Trigger: GAGGCGGCCAGCCCAGGGGCACCTACCCGCGATGTC...CAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp CTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCCTTCCCTCCGACATCGCGGGTAGGTaGCCCTGGGCTGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LIVWRLAGHWGCIHSLPSDIAGR*PWAGRL
Trigger: GAGGCGGCCAGCCCAGGGGCACCTACCCGCGATGTC...GGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp GGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCACACTGGGCCACAGGCTaGCGGGGACGAGCGATCATG +
Preference number: 4 (lower is better)
Translates to: GLMTRPWPNASAFLFWAPHWATG*RGRAIM
Trigger: CATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAGTG...TGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGGAGGCCGCGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGEAAWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACGCGGCCTC...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGCCCAGCTGCCTGGGTTaGAGCGGCTGCGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGPSCLG*SGCGPQ
Trigger: CTGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGG...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp GCGGCTGCTGCAGGCTCTGCTGCCGCATCAGTGTGCGGGGTCGCTGGCATTTCGGCCCCGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: AAAAGSAAASVCGVAGISAPSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGC...CGAAATGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR CCA 90 bp AGAGGGAGTGAGCCAGAGAAGTCCAGGGTAGAGGCCCTGTGCCAGTGGTCAGGGGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGSEPEKSRVEALCQWSGVVPAA*VGAAAA
Trigger: GGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCAC...CCCTGACCACTGGCACAGGGCCTCTACCCTGGACTTCTCTGGCTCACTCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp GCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCGGAGGAAGAGCGGGTTaGGGGACAGTCGAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: AVRLIVWRLAGHWGCIHSGGRAG*GTVEGR
Trigger: GCGACCCTCGACTGTCCCTCAACCCGCTCTTCCTCC...GCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp GATGGGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCGCTGCCGCATCAGTGTaGGGGGTCGCTGGCATTTCG +
Preference number: 4 (lower is better)
Translates to: DGPDDQAVAKRLGLPLLGAAASV*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACACTGATGCGGCAGC...GCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp GATGGGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCTGCTGCAGGCTCTGCTaGCGCATCAGTGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: DGPDDQAVAKRLGLPLLGCCRLC*RISVRG
Trigger: ACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCA...GCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGTGGCTGGTGGTGGGCTaGCTGGGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWWLVVG*LGCRPC
Trigger: GCAGGGCCGGCAGCCCAGTCAGCCCACCACCAGCCA...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp CAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGGACATCGCGGGTAGGTaGCCCTGGGCTGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QDSGAQAIYYPQCPGPSRDIAGR*PWAGRL
Trigger: GAGGCGGCCAGCCCAGGGGCACCTACCCGCGATGTC...CCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAACCAGGTTCTCTCGGCTaGAGCCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PDDQAVAKRLGLPLLGPKPGSLG*SPRGPH
Trigger: ATGAGGCCCACGAGGGCTGCAGCCGAGAGAACCTGG...TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GGGGACAGAGGGTATGTGACCCTCTTCACTTCAGAGTGGGGCAGGGCCCATGGACCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GDRGYVTLFTSEWGRAHGPRGPS*LGWSGC
Trigger: GCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGG...TCCATGGGCCCTGCCCCACTCTGAAGTGAAGAGGGTCACATACCCTCTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTGCCCCGCCGCCGCAGTaGCCACTTTGGCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPAPPPQ*PLWRLT
Trigger: TGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGC...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CAGTCCCTCCAATCCCAGCTGTTGCTTCCCCTGGAAGAAGAGAGAGAGAGGGCTCTGGGCTGCCGGCCCTaGTGGTTCTGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QSLQSQLLLPLEEERERALGCRP*WFWLSG
Trigger: GCCGCTGAGCCAGAACCAGCAGGGCCGGCAGCCCAG...AGCCCTCTCTCTCTCTTCTTCCAGGGGAAGCAACAGCTGGGATTGGAGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp GGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCATTGGCTGGCAGCTCTTaGGCCTTCATGACCTTCACG +
Preference number: 4 (lower is better)
Translates to: GLMTRPWPNASAFLFWAPLAGSS*AFMTFT
Trigger: CGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAA...TGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCCGGCCCTGCTGGTTCTaGCTCAGCGGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTRPCWF*LSGCCR
Trigger: CCTGCAGCAGCCGCTGAGCCAGAACCAGCAGGGCCG...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp GGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCACTCTGTCTAGGTCGTTaGTGGCTTTCTTCTCACCGC +
Preference number: 4 (lower is better)
Translates to: GLMTRPWPNASAFLFWAPLCLGR*WLSSHR
Trigger: GCGGTGAGAAGAAAGCCATCAACGACCTAGACAGAG...TGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTCACTGGGCCACAGGCTaGCGGGGACGAGCGATCATG +
Preference number: 4 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPHWATG*RGRAIM
Trigger: CATGATCGCTCGTCCCCGGCAGCCTGTGGCCCAGTG...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp ACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCTGGAGCCGGCCGAGGTaGCCTGCCGAGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: TSPGLWSTGYILSSVSRAWSRPR*PAEPDP
Trigger: GGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCA...GGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp GGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAGGATGGCAGCGATTTCTCTCTGGGTTGGAGCGGCTaGGGCCCCCAGCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GSTQETEADGRKDGSDFSLGWSG*GPQLPG
Trigger: ACCGGGCAGCTGGGGGCCGCAGCCGCTCCAACCCAG...AGAGAAATCGCTGCCATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCCCCACGCCCCGAGTCTaGCGTGCCCACCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRTLEHRLYTILSVQGPAPTPRV*RAHRLQ
Trigger: TTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGG...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAAGGGGGCTGAAGTCCTTGGCTaGCAGCTCTTGGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: DQAVAKRLGLPLLGPKKGAEVLG*QLLGLH
Trigger: ATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGC...CCCCTTTTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGTGGTGGTGGGCTGACTaGGCTGCCGGCCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWWWWAD*AAGPAG
Trigger: ACCAGCAGGGCCGGCAGCCCAGTCAGCCCACCACCA...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTFPAAR*LCTIRQ
Trigger: CTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAA...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
3UTR CAA 72 bp CCTGCTGGTGCAGGTTGCTCGGGCCCCTCGGATGCCTaGGTGGAAGCACTCAGGAGACTGAGGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: PAGAGCSGPSDA*VEALRRLRQME
Trigger: TTCCATCTGCCTCAGTCTCCTGAGTGCTTCCACCAAGGCATCCGAGGGGCCCGAGCAACCTGCACCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCTTGCCCAGTTTGCGCTaGCACCAGTGGCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGLPSLR*HQWHRP
Trigger: CGGCCTGTGCCACTGGTGTCAGCGCAAACTGGGCAA...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp AACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: NGSPFCGQTHRVASGRALSVCPV*ADTSGT
Trigger: TGTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...CAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAGACCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp CAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCCAGGTTCTCTCGGCTaGAGCCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QDSGAQAIYYPQCPGPSRPGSLG*SPRGPH
Trigger: ATGAGGCCCACGAGGGCTGCAGCCGAGAGAACCTGG...CCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp TGGAAGAAGAGAGAGAGAGGGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTAGGCTGCTGCAGGCTCTaGTGCCGCATCAGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: WKKRERGLGPTEETAKALGCCRL*CRISVR
Trigger: CCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCC...TAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCCCTCTCTCTCTCTTCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp TGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGCGGGCCTCTGGAGGGATCTGCACAGCCTTCCCTCCTaGAGGCAACCTCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CLKENGGYAHLAGLWRDLHSLPS*RQPLVP
Trigger: GGGGACAAGAGGTTGCCTGCAGGAGGGAAGGCTGTG...CAGATCCCTCCAGAGGCCCGCCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp AGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTACCGCCTTGCCACTGCTaGCCGGCTCGCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHNTNTQGHISRTLEHRLPPCHC*PARWGQ
Trigger: CTGCCCCCAGCGAGCCGGGCAGCAGTGGCAAGGCGG...TAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGCGGCCAGGTGGCTCTaGACCATCCGCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPAARWL*TIRQRP
Trigger: AGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGC...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GATGGGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCACAGCCTTCCCTCCTaGAGGCAACTTGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: DGPDDQAVAKRLGLPLLGHSLPS*RQLGQV
Trigger: AACTTGTCCAAGTTGCCTGCAGGAGGGAAGGCTGTG...GCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAAGGGGCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DQAVAKRLGLPLLGPKKGQKVCI*VRSTLF
Trigger: GAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...CCCCTTTTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLMTRPWPNASAFLFWAPTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...TGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp TGGAAGAAGAGAGAGAGAGGGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTATTCAGCTGGTGCCACTaGGCCACAGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: WKKRERGLGPTEETAKALFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCTGTGGCCCAGTGGCACCAGCTGAA...TAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCCCTCTCTCTCTCTTCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp CCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAGCGTTCTGGTTCTGCTaGGTTCCTGGGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDDQAVAKRLGLPLLGPKAFWFC*VPGFCR
Trigger: CCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC...TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTGGCCACTTTGGCGCCTaGCAGGAGCGTGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPGHFGA*QERAID
Trigger: ATCAATGGCACGCTCCTGTCAGGCGCCAAAGTGGCC...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GCTGGCAGCTCTTGGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTTGGAAGGCCCCGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: AGSSWAFMTFTVSVDSWKAPSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGC...CTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGCCCCGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRTLEHRLYTILSVQGPAAPSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGC...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCACCCACGCCCCGAGTCTaGCGTGCCCACCGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPPTPRV*RAHRLQ
Trigger: TTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGG...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGTCAGACTCATCGTGTaGCGTCTGGCCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SRTLEHRLYTILSVQGPAVRLIV*RLAGHW
Trigger: CCAGTGCCCGGCCAGACGCCACACGATGAGTCTGAC...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCATTCAGCTGGTGCCACTaGGCCACAGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCTGTGGCCCAGTGGCACCAGCTGAA...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATCCAGGCTCTGGCTGGTaGTGGGCTGACTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYPGSGW*WADWAA
Trigger: GGCAGCCCAGTCAGCCCACCACCAGCCAGAGCCTGG...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp GCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTTTGCCCAGTTTGCGCTaGCACCAGTGGCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: AWLQILPEGLHLGQVHLVLPSLR*HQWHRP
Trigger: CGGCCTGTGCCACTGGTGTCAGCGCAAACTGGGCAA...AACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR TCA 90 bp TCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCAACCTCTTGTCCCCCTaGGCGTTCTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRTLEHRLYTILSVQGPANLLSP*AFWFCW
Trigger: CCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTT...GGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCACAGGAGCGTGCCATTaGTGGCTTTCTTCTCACCGC +
Preference number: 4 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTTGACH*WLSSHR
Trigger: GCGGTGAGAAGAAAGCCATCAATGGCACGCTCCTGT...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR TCA 90 bp CATGTCCTTCCAGTGTTTCACTTCACCTGGTCCGCTCTTCCAGGACAGGTAGATGGAGGAAGAGCGGGTTaGGGGACAGTCGAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: HVLPVFHFTWSALPGQVDGGRAG*GTVEGR
Trigger: GCGACCCTCGACTGTCCCTCAACCCGCTCTTCCTCC...ATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGSVCPV*ADTSGT
Trigger: TGTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCTCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCATAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: QDSGAQAIYYPQCPGPSRHRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTATG...CCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTCATAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPHRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTATG...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAGGATGGCAGCGATTTCTCTCAGGCTTTCAGCTGGTaGCACTGGGCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSTQETEADGRKDGSDFSQAFSW*HWATGC
Trigger: GCAGCCTGTGGCCCAGTGGCACCAGCTGAAAGCCTG...AGAGAAATCGCTGCCATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCCCTTGTTCAGAGGGATaGACACCTCCCCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGPCSEG*TPPQWG
Trigger: ACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGG...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWSVCPV*ADTSGT
Trigger: TGTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATGCCCCGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYAPSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGC...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp TGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGCGGGCCTCTGGAGGGATCTGTTGGTCTCCAGTTTGTaGTTCTTGTCGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLKENGGYAHLAGLWRDLLVSSL*FLSGSR
Trigger: CCTGCTACCCGACAAGAAGCACAAACTGGAGACCAA...CAGATCCCTCCAGAGGCCCGCCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGTCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCACCTCGGTTTCGAATCTaGCCCACCACGTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPPRFRI*PTTWSQ
Trigger: CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGG...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp CAGTCCCTCCAATCCCAGCTGTTGCTTCCCCTGGAAGAAGAGAGAGAGAGGGCTCCCTCAGCTTCTCCGTaGGTATGTCGAAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: QSLQSQLLLPLEEERERAPSASP*VCRRRK
Trigger: CTTTCGCCTTCGACATACCCACGGAGAAGCTGAGGG...AGCCCTCTCTCTCTCTTCTTCCAGGGGAAGCAACAGCTGGGATTGGAGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGCCCTCAGCTTCTCCGTaGGTATGTCGAAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWPSASP*VCRRRK
Trigger: CTTTCGCCTTCGACATACCCACGGAGAAGCTGAGGG...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCGTGTTTCACTTCACCTaGTCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGVFHFT*SALPGQ
Trigger: CTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACAC...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYICPTT*SQLPGL
Trigger: CAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGAT...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAAGTCCTCTCCGGGTGGTaGCACCGGCGCCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPTSLVSANQERKRQSREVLSGW*HRRRLL
Trigger: GAGAAGCCGGCGCCGGTGCCACCACCCGGAGAGGAC...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
3UTR CAA 72 bp TCTCAGCAGAGGCGGGGAGAAGGGACGACAGCTTCTTaGGGTATGGCAACTTCAGACTCCTGGAATGCTCCC +
Preference number: 4 (lower is better)
Translates to: SQQRRGEGTTAS*GMATSDSWNAP
Trigger: GGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTCGTCCCTTCTCCCCGCCTCTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp TTAATCAGAACAGGCCTTGCCACAAAAAGCAGGGCCCATTCCCACAAAAATATGGACATCGCGGGTAGGTaGCCCTGGGCTGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LIRTGLATKSRAHSHKNMDIAGR*PWAGRL
Trigger: GAGGCGGCCAGCCCAGGGGCACCTACCCGCGATGTC...CATATTTTTGTGGGAATGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp TTTATAAAACACTTGCGCTCAAGGACTCAAACACAATACAAACAGCGCCACCAGGCTGCGGCCCCCAGCTaGCCGGTACTTGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: FIKHLRSRTQTQYKQRHQAAAPS*PVLGAG
Trigger: GCCGGCTCCAAGTACCGGGCAGCTGGGGGCCGCAGC...CTGGTGGCGCTGTTTGTATTGTGTTTGAGTCCTTGAGCGCAAGTGTTTTATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp GGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGATGCGTCTGGCCGGGCACTaGGGCTGTATTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GGVCWGRWNLYSSYTEKMRLAGH*GCIHSL
Trigger: AAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACG...CATCTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp ACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTACAGGCTTTCAGCTGGTaGCACTGGGCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQIHRATSPGLWSTGYILQAFSW*HWATGC
Trigger: GCAGCCTGTGGCCCAGTGGCACCAGCTGAAAGCCTG...TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTTCTTCCGCTTCACCTTaGTCTCCAGTTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPSSASP*SPVCAS
Trigger: AGAAGCACAAACTGGAGACCAAGGTGAAGCGGAAGA...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
3UTR CAA 72 bp AGAGAGACCTTTAGAAGTAGTGCATCTGGGAGGGACTaGCGGGAGAAGGACAGTGGTCTCTCTCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: RETFRSSASGRD*REKDSGLSQAR
Trigger: ACGTGCCTGAGAGAGACCACTGTCCTTCTCCCGCAAGTCCCTCCCAGATGCACTACTTCTAAAGGTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CAA 72 bp CCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLSVLVLLGSWV*QVRDIGKVILF
Trigger: GAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CAA 72 bp ATCTTGACAAAGGGGTCACTAGTACCGCTGAAGTCCTaGGCTGGCAGCTCTTGGGCCTTCATGACCTTCACG +
Preference number: 4 (lower is better)
Translates to: ILTKGSLVPLKS*AGSSWAFMTFT
Trigger: CGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTACTAGTGACCCCTTTGTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR TCA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAATTGCCCAGTTTGCGCTaGCACCAGTGGCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: SPTSLVSANQERKRQSRELPSLR*HQWHRP
Trigger: CGGCCTGTGCCACTGGTGTCAGCGCAAACTGGGCAA...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LVLLGSWVLQVRDIGKVISVCPV*ADTSGT
Trigger: TGTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...GATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR CCA 90 bp AGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATTGGCTGGCAGCTCTTaGGCCTTCATGACCTTCACG +
Preference number: 4 (lower is better)
Translates to: RHNTNTQGHISRTLEHRLLAGSS*AFMTFT
Trigger: CGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAA...TAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGAGGGGTGTGCTGGGGCAGGTGGAATTTGTATAGCAGTTACACAGAGAAGATGCCTTGTTCAGAGGGATaGACACCTCCCCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: GGVCWGRWNLYSSYTEKMPCSEG*TPPQWG
Trigger: ACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGG...CATCTTCTCTGTGTAACTGCTATACAAATTCCACCTGCCCCAGCACACCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp TTAATCAGAACAGGCCTTGCCACAAAAAGCAGGGCCCATTCCCACAAAAATATGAGTGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LIRTGLATKSRAHSHKNMSVRGR*HFGSPA
Trigger: CGCGGGAGAGCCGAAATGCCAGCGACCCCGCACACT...CATATTTTTGTGGGAATGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp ACTACTTCTGAGATGACTTTAGGTCTGACCTGGGGCATGCAATATTCTCTACTTCAGCTGCCCGGTACTTaGAGCCGGCCGAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: TTSEMTLGLTWGMQYSLLQLPGT*SRPRCP
Trigger: AGGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTG...AAGTAGAGAATATTGCATGCCCCAGGTCAGACCTAAAGTCATCTCAGAAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CAA 72 bp TTGGGCCTTCATGACCTTCACGGTGAGTGTGGACTCTaGGAAGTTGTAGCCAACACTGAACTGGATTCGGCC +
Preference number: 4 (lower is better)
Translates to: LGLHDLHGECGL*EVVANTELDSA
Trigger: GGCCGAATCCAGTTCAGTGTTGGCTACAACTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
3UTR CAA 72 bp ATCTTGCCGATGACGTCGTTGCGGCTGAGCTTGTCTTaGTCCATGACAGTGATGATGATCGTGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ILPMTSLRLSLS*SMTVMMIVVSL
Trigger: GAGGGAGACCACGATCATCATCACTGTCATGGACAAAGACAAGCTCAGCCGCAACGACGTCATCGGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR GCA 90 bp ACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCTGGGTTCCTGGGTTTTaGAGGTCAGGGATATTGGCA +
Preference number: 4 (lower is better)
Translates to: TSPGLWSTGYILSSVSRAWVPGF*RSGILA
Trigger: TGCCAATATCCCTGACCTGCAAAACCCAGGAACCCA...GGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp AGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTAGTGTTTCACTTCACCTaGTCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RHNTNTQGHISRTLEHRLVFHFT*SALPGQ
Trigger: CTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACAC...TAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp GGCTGGGACCCACAGAGGAAACAGCCAAGGCCCTACTTTTTCACGATCCTTTATGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GWDPQRKQPRPYFFTILYVLLGS*VLQVRD
Trigger: ATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAAC...ATAAAGGATCGTGAAAAAGTAGGGCCTTGGCTGTTTCCTCTGTGGGTCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR TCA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAAGCAACTTGGACAAGTTaGGCTTCCCTGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPTSLVSANQERKRQSREATWTS*ASLRPG
Trigger: ACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGC...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp ACTACTTCTGAGATGACTTTAGGTCTGACCTGGGGCATGCAATATTCTCTACTTGTCAGACTCATCGTGTaGCGTCTGGCCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TTSEMTLGLTWGMQYSLLVRLIV*RLAGHW
Trigger: CCAGTGCCCGGCCAGACGCCACACGATGAGTCTGAC...AAGTAGAGAATATTGCATGCCCCAGGTCAGACCTAAAGTCATCTCAGAAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAATCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPTSLVSANQERKRQSRESHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp AGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATCTTCCGCTTCACCTTaGTCTCCAGTTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RHNTNTQGHISRTLEHRLSSASP*SPVCAS
Trigger: AGAAGCACAAACTGGAGACCAAGGTGAAGCGGAAGA...TAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR GCA 90 bp CGTCAAGCATGTTCGAATTATCCTTCAGCTGTCTTTCTCAGAGAAGGAGAGGAGGCTGACGGTGATGATTaGAGAGACCAGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: RQACSNYPSAVFLREGEEADGDD*RDQQDI
Trigger: GATGTCCTGCTGGTCTCTGCAATCATCACCGTCAGC...CTCCTCTCCTTCTCTGAGAAAGACAGCTGAAGGATAATTCGAACATGCTTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTGCTGAAGTCCTTGGCTaGCAGCTCTTGGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACAEVLG*QLLGLH
Trigger: ATGAAGGCCCAAGAGCTGCCAGCCAAGGACTTCAGC...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CCA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAACAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SPTSLVSANQERKRQSREQKVCI*VRSTLF
Trigger: GAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CCA 90 bp ACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTAGCAGGTCAGGGATATTaGCAAAGTCATCCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: TQIHRATSPGLWSTGYILAGQGY*QSHPVP
Trigger: CGGAACAGGATGACTTTGCCAATATCCCTGACCTGC...TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp TTTATAAAACACTTGCGCTCAAGGACTCAAACACAATACAAACAGCGCCACCAGTCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: FIKHLRSRTQTQYKQRHQSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...CTGGTGGCGCTGTTTGTATTGTGTTTGAGTCCTTGAGCGCAAGTGTTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR GCA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTTTGGTCTCCAGTTTGTaGTTCTTGTCGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACLVSSL*FLSGSR
Trigger: CCTGCTACCCGACAAGAAGCACAAACTGGAGACCAA...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
3UTR CAA 72 bp ATTAGGGTATGTTGGGCTCAAGTCTCTGAATTGGTTTaGAGGCTCTTTCACCAGCTGGGTCTTTTCAATACA +
Preference number: 4 (lower is better)
Translates to: IRVCWAQVSELV*RLFHQLGLFNT
Trigger: TGTATTGAAAAGACCCAGCTGGTGAAAGAGCCTCAAAACCAATTCAGAGACTTGAGCCCAACATACCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp CCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAACCAGCTGCCCGGTACTaGGAGCCGGCCGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PDDQAVAKRLGLPLLGPKPAARY*EPAEVP
Trigger: GGGCACCTCGGCCGGCTCCAAGTACCGGGCAGCTGG...TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS CCA 90 bp CCTCCTGCAGGCAACTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAGCGGCCTCTCCCCGCCTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: PPAGNLDKLSFPAAR*LCTIRQRPLPALPL
Trigger: CAGTGGCAAGGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCCTGCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225452.3
ENSMUST00000235479.2
CDS CCA 90 bp ACCATCCGGCCTTCCTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAGCGGCCTCTCCCCGCCTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: TIRPSLDKLSFPAAR*LCTIRQRPLPALPL
Trigger: CAGTGGCAAGGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGGAAGGCCGGATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237366.2
CDS-3UTR CAA 90 bp GACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAAGGGGGTACCGCTGAAGTCCTaGGCTGGCAGCTCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: DQAVAKRLGLPLLGPKKGVPLKS*AGSSWA
Trigger: GGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTAC...CCCCTTTTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp CTTCTCTCCACTCCAGGCACTGCCTTAAAGAAAACGGGGGCTATGCCCACCTGGCGGCCTCTCCCCGCCTaGCCACTGCTGCCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: LLSTPGTALKKTGAMPTWRPLPA*PLLPGS
Trigger: CGAGCCGGGCAGCAGTGGCAAGGCGGGGAGAGGCCG...CCAGGTGGGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS GCA 90 bp CAGGCCGCAGAGGACGATAGTGACGCTAAGGCTGACGGTGATGATTaGAGAGACCAGCAGGACATCGCGGGTAGGTGCCCCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QAAEDDSDAKADGDD*RDQQDIAGRCPWAG
Trigger: GCCAGCCCAGGGGCACCTACCCGCGATGTCCTGCTGGTCTCTGCAATCATCACCGTCAGCCTTAGCGTCACTATCGTCCTCTGCGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000073899.6
ENSMUST00000076968.11
ENSMUST00000169121.9
ENSMUST00000223586.2
ENSMUST00000224135.3
ENSMUST00000225452.3
ENSMUST00000235303.2
ENSMUST00000235479.2
ENSMUST00000235784.2
ENSMUST00000237366.2
ENSMUST00000237745.2
CDS CCA 90 bp CTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTaGGGCTGTATTCACAGCCTTCCCTCCTGCAGGCAACTTGATGGC +
Preference number: 5 (lower is better)
Translates to: LRSAVRLIVWRLAGH*GCIHSLPSCRQLDG
Trigger: GCCATCAAGTTGCCTGCAGGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073899.6
CDS CCA 90 bp CTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTaGGGCTGTATTCACAGCCTTCCCTCCTGCAGGCAACTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LRSAVRLIVWRLAGH*GCIHSLPSCRQLEG
Trigger: TCCCTCAAGTTGCCTGCAGGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223586.2
CDS-3UTR CAA 90 bp GGCCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAACCTTGGTCTCCAGTTaGTGCTTCTTGTCGGGTAGC +
Preference number: 5 (lower is better)
Translates to: GLMTRPWPNASAFLFWAPTLVSS*CFLSGS
Trigger: GCTACCCGACAAGAAGCACAAACTGGAGACCAAGGT...TGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS CCA 90 bp CTCCGTTCTGCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTaGGGCTGTATTCACAGCCTTCCCTCCTGCAGGCAACTTGGACAA +
Preference number: 5 (lower is better)
Translates to: LRSAVRLIVWRLAGH*GCIHSLPSCRQLGQ
Trigger: TTGTCCAAGTTGCCTGCAGGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGCAGAACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225452.3
ENSMUST00000235479.2
CDS CCA 90 bp AGGCAACTTGATGGCTTTCTTCTCACCGCGCCCACGCCCCGAGTCTaGCGTGCCCACCGTCTCCAAGGAATTCTTGTAGCGTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RQLDGFLLTAPTPRV*RAHRLQGILVAFAQ
Trigger: CTGGGCAAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGGCGCGGTGAGAAGAAAGCCATCAAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073899.6
CDS-3UTR CAA 90 bp GCCAGGAGGCAGCTGAAACAGCCATTTGCCCTGGTCCCCACTTCTTCTCAGCCGCTTGGCTGGCAGCTCTaGGGCCTTCATGACCTTCAC +
Preference number: 5 (lower is better)
Translates to: ARRQLKQPFALVPTSSQPLGWQL*GLHDLH
Trigger: GTGAAGGTCATGAAGGCCCAAGAGCTGCCAGCCAAG...CGGCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTTTCAGCTGCCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp GACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAAAAGGGGTTCTTCCGCTTCACCTaGGTCTCCAGTTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: DQAVAKRLGLPLLGPKKGFFRFT*VSSLCF
Trigger: GAAGCACAAACTGGAGACCAAGGTGAAGCGGAAGAA...CCCCTTTTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp CCTGATGACCAGGCCGTGGCCAAACGCCTCGGCCTTCCTCTTCTGGGCCCCAAATCGTTGCGGCTGAGCTaGTCTTTGTCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: PDDQAVAKRLGLPLLGPKSLRLS*SLSMTV
Trigger: CACTGTCATGGACAAAGACAAGCTCAGCCGCAACGA...TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS CCA 90 bp CTCGAAATTGATGGCTTTCTTCTCACCGCGCCCACGCCCCGAGTCTaGCGTGCCCACCGTCTCCAAGGAATTCTTGTAGCGTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LEIDGFLLTAPTPRV*RAHRLQGILVAFAQ
Trigger: CTGGGCAAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGGCGCGGTGAGAAGAAAGCCATCAATTTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224135.3
CDS-3UTR CAA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTCGCTGGTAAGGGAGTaGACGAGGTCCGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTSLVRE*TRSETE
Trigger: CTCTGTCTCGGACCTCGTCAACTCCCTTACCAGCGA...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp GCGGTCAGACTCATCGTGTGGCGTCTGGCCGGGCACTGGGGCTGTATTCACAGCTCTCTGTCTAGGTCGTaGATGGCTTTCTTCTCACCG +
Preference number: 5 (lower is better)
Translates to: AVRLIVWRLAGHWGCIHSSLSRS*MAFFSP
Trigger: CGGTGAGAAGAAAGCCATCAACGACCTAGACAGAGA...GCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR CAA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTGTGGAGTCCTCGAAATaGAGGGACAGTCGAGGGTCG +
Preference number: 5 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPVESSK*RDSRGS
Trigger: CGACCCTCGACTGTCCCTCAATTTCGAGGACTCCAC...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp GCCAGGAGGCAGCTGAAACAGCCATTTGCCCTGGTCCCCACTTCTTCTCAGCCGCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGC +
Preference number: 5 (lower is better)
Translates to: ARRQLKQPFALVPTSSQPLGSWV*QVRDIG
Trigger: GCCAATATCCCTGACCTGCAAAACCCAGGAACCCAG...CGGCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTTTCAGCTGCCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp ACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCGTACCGCTGAAGTCCTaGGCTGGCAGCTCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: TSPGLWSTGYILSSVSRAVPLKS*AGSSWA
Trigger: GGCCCAAGAGCTGCCAGCCAAGGACTTCAGCGGTAC...GGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCTTGCCGATGACGTCGTaGCGGCTGAGCTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGLPMTS*RLSLSL
Trigger: CAAAGACAAGCTCAGCCGCAACGACGTCATCGGCAA...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCCCTCCTGCAGGCAACTaGGACAAGTTGAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTPPAGN*DKLSFP
Trigger: AGGGAAGCTCAACTTGTCCAAGTTGCCTGCAGGAGG...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp CTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTGACAGGAGCGTGCCATaGATGGCTTTCTTCTCACCG +
Preference number: 5 (lower is better)
Translates to: LWSTGYILSSVSRAQPAPDRSVP*MAFFSP
Trigger: CGGTGAGAAGAAAGCCATCAATGGCACGCTCCTGTC...AGGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp GGGGACAGAGGGTATGTGACCCTCTTCACTTCAGAGTGGGGCAGGGCCCATGGAGGTGAGTGTGGACTCTaGGAAGTTGTAGCCAACACT +
Preference number: 5 (lower is better)
Translates to: GDRGYVTLFTSEWGRAHGGECGL*EVVANT
Trigger: AGTGTTGGCTACAACTTCCAAGAGTCCACACTCACC...TCCATGGGCCCTGCCCCACTCTGAAGTGAAGAGGGTCACATACCCTCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCTTGGTCTCCAGTTaGTGCTTCTTGTCGGGTAGC +
Preference number: 5 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGTLVSS*CFLSGS
Trigger: GCTACCCGACAAGAAGCACAAACTGGAGACCAAGGT...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp CGAGGTCCGAGACAGAGGAACGGGTCTCCGTTCTGCGGTCAGACTCATCGTGTGTCTCTGTCTAGGTCGTaGATGGCTTTCTTCTCACCG +
Preference number: 5 (lower is better)
Translates to: RGPRQRNGSPFCGQTHRVSLSRS*MAFFSP
Trigger: CGGTGAGAAGAAAGCCATCAACGACCTAGACAGAGA...CACACGATGAGTCTGACCGCAGAACGGAGACCCGTTCCTCTGTCTCGGACCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235303.2
ENSMUST00000237745.2
CDS-3UTR CAA 90 bp ACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCGGCAACTTGGACAAGTaGAGCTTCCCTGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TSPGLWSTGYILSSVSRAGNLDK*SFPAAR
Trigger: CCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCC...GGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp ACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCACCCGGCTGAGCTTGTCTTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: TLEHRLYTILSVQGPAGTRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAAGACAAGCTCAGCCG...GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp AGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCAGGGCCCAGCCGGCTCTCTGTCTAGGTCGTaGATGGCTTTCTTCTCACCG +
Preference number: 5 (lower is better)
Translates to: RTLEHRLYTILSVQGPAGSLSRS*MAFFSP
Trigger: CGGTGAGAAGAAAGCCATCAACGACCTAGACAGAGA...GCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp AGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATCGCTGGTAAGGGAGTaGACGAGGTCCGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: RHNTNTQGHISRTLEHRLSLVRE*TRSETE
Trigger: CTCTGTCTCGGACCTCGTCAACTCCCTTACCAGCGA...TAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp GAGGAGAGCCCAGCATCCAGAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTTTGCCGATGACGTCGTaGCGGCTGAGCTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: EESPASRKARETFRSSASLPMTS*RLSLSL
Trigger: CAAAGACAAGCTCAGCCGCAACGACGTCATCGGCAA...AGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTCTGGATGCTGGGCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp AGGCAGCTGAAACAGCCATTTGCCCTGGTCCCCACTTCTTCTCAGCCGTCCATATGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: RQLKQPFALVPTSSQPSICRSGI*AKSSCS
Trigger: GGAACAGGATGACTTTGCCAATATCCCTGACCTGCA...TATGGACGGCTGAGAAGAAGTGGGGACCAGGGCAAATGGCTGTTTCAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp AGACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTAGGTGAGTGTGGACTCTaGGAAGTTGTAGCCAACACT +
Preference number: 5 (lower is better)
Translates to: RHNTNTQGHISRTLEHRLGECGL*EVVANT
Trigger: AGTGTTGGCTACAACTTCCAAGAGTCCACACTCACC...TAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp GAGGAGAGCCCAGCATCCAGAAAGGCCAGAGAGACCTTTAGAAGTAGTGCATCTCCGATGTCCATGGCTTaGAGGTTTCGAGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: EESPASRKARETFRSSASPMSMA*RFRALM
Trigger: CATCAAAGCTCGAAACCTCAAAGCCATGGACATCGG...AGATGCACTACTTCTAAAGGTCTCTCTGGCCTTTCTGGATGCTGGGCTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp ACACAACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATACGGCTGAGCTTGTCTTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: TQHKYTGPHLQDSGAQAIRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAAGACAAGCTCAGCCG...TATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp GGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATCCTCAGTGTCCATTGAGGTTTCGAGCTTaGATGATGTTCACGATGATG +
Preference number: 5 (lower is better)
Translates to: GPHLQDSGAQAIYYPQCPLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCTCGAAACCTCAA...TGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp GGAAGCACTCAGGAGACTGAGGCAGATGGAAGGAAGGATGGCAGCGATTTCTCTTCAGGTTCCTCTTCTTaGTCACGGTCTTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GSTQETEADGRKDGSDFSSGSSS*SRSSFS
Trigger: AGAAAAAGAAGACCGTGACAAAGAAGAGGAACCTGA...AGAGAAATCGCTGCCATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAATCGTTGCGGCTGAGCTaGTCTTTGTCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: SPTSLVSANQERKRQSRESLRLS*SLSMTV
Trigger: CACTGTCATGGACAAAGACAAGCTCAGCCGCAACGA...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAACCGATGTCCATGGCTTaGAGGTTTCGAGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: SPTSLVSANQERKRQSREPMSMA*RFRALM
Trigger: CATCAAAGCTCGAAACCTCAAAGCCATGGACATCGG...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp AACTTCTGGAATAGAAGCCAACAGAAGCTGTTTTATCCCCTCTCAGGTGCTTGTTTCTTCCGCTTCACCTaGGTCTCCAGTTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: NFWNRSQQKLFYPLSGACFFRFT*VSSLCF
Trigger: GAAGCACAAACTGGAGACCAAGGTGAAGCGGAAGAA...ACAAGCACCTGAGAGGGGATAAAACAGCTTCTGTTGGCTTCTATTCCAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS-3UTR CAA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAAAAGGCGAAAGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SPTSLVSANQERKRQSREKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCTTTCGCCTT...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp ACACAAATACACAGGGCCACATCTCCAGGACTCTGGAGCACAGGCTATATACTATTGAGGTTTCGAGCTTaGATGATGTTCACGATGATG +
Preference number: 5 (lower is better)
Translates to: TQIHRATSPGLWSTGYILLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCTCGAAACCTCAA...TAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCCTGTGTATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp TCCCCCACGTCTTTAGTATCAGCAAATCAGGAAAGAAAGAGGCAAAGCAGGGAATCAGGTTCCTCTTCTTaGTCACGGTCTTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: SPTSLVSANQERKRQSRESGSSS*SRSSFS
Trigger: AGAAAAAGAAGACCGTGACAAAGAAGAGGAACCTGA...TTCCCTGCTTTGCCTCTTTCTTTCCTGATTTGCTGATACTAAAGACGTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076968.11
ENSMUST00000235479.2
CDS-3UTR CAA 90 bp ACTACTTCTGAGATGACTTTAGGTCTGACCTGGGGCATGCAATATTCTCTACTTAAGGCGAAAGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TTSEMTLGLTWGMQYSLLKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCTTTCGCCTT...AAGTAGAGAATATTGCATGCCCCAGGTCAGACCTAAAGTCATCTCAGAAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076968.11
CDS TCA 72 bp CGCCAGCCCCGCCGCCGCAGTGGCCACTTTGGCGCCTaGCAGGAGCGTGCCATTGAGGGACAGTCGAGGGTC +
Preference number: 6 (lower is better)
Translates to: RQPRRRSGHFGA*QERAIEGQSRV
Trigger: GACCCTCGACTGTCCCTCAATGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169121.9
ENSMUST00000225452.3
CDS CAA 72 bp CGCTCCACCGCCAGCCCCGCCGCCGCAGTGGCCACTTaGGCGCCTGACAGGAGCGTGCCATTGAGGGACAGT +
Preference number: 6 (lower is better)
Translates to: RSTASPAAAVAT*APDRSVPLRDS
Trigger: ACTGTCCCTCAATGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCGGTGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169121.9
ENSMUST00000225452.3
CDS CAA 72 bp CGCTCCACCGCCAGCCCCGCCGCCGCAGTGGCCACTTaGGCGCCTGACAGGAGCGTGCCATTGATGGCTTTC +
Preference number: 6 (lower is better)
Translates to: RSTASPAAAVAT*APDRSVPLMAF
Trigger: GAAAGCCATCAATGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCGGTGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235479.2
ENSMUST00000235784.2
ENSMUST00000237366.2
CDS CCA 72 bp GGCAACTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAGCGGCCTCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: GNLDKLSFPAAR*LCTIRQRPLPA
Trigger: GGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225452.3
ENSMUST00000235479.2
CDS CCA 72 bp CCTTCCTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCATCCGCCAGCGGCCTCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: PSLDKLSFPAAR*LCTIRQRPLPA
Trigger: GGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237366.2
CDS GCA 72 bp CTTTCTTCTCACCGCGCCCACGCCCCGAGTCTGGCGTaGCCACCGTCTCCAAGGAATTCTTGTAGCGTTTGC +
Preference number: 6 (lower is better)
Translates to: LSSHRAHAPSLA*PPSPRNSCSVC
Trigger: GCAAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGGCGCGGTGAGAAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000073899.6
ENSMUST00000076968.11
ENSMUST00000169121.9
ENSMUST00000223586.2
ENSMUST00000224135.3
ENSMUST00000225452.3
ENSMUST00000235303.2
ENSMUST00000235479.2
ENSMUST00000235784.2
ENSMUST00000237366.2
ENSMUST00000237745.2
CDS GCA 72 bp GAGGACGATAGTGACGCTAAGGCTGACGGTGATGATTaGAGAGACCAGCAGGACATCGCGGGTAGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: EDDSDAKADGDD*RDQQDIAGRCP
Trigger: GGGGCACCTACCCGCGATGTCCTGCTGGTCTCTGCAATCATCACCGTCAGCCTTAGCGTCACTATCGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000073899.6
ENSMUST00000076968.11
ENSMUST00000169121.9
ENSMUST00000223586.2
ENSMUST00000224135.3
ENSMUST00000225452.3
ENSMUST00000235303.2
ENSMUST00000235479.2
ENSMUST00000235784.2
ENSMUST00000237366.2
ENSMUST00000237745.2
CDS GCA 72 bp CCTTGGGAGGATAGGAACTCCATTTCTGCTGCACTGTaGTTTCATTGTTATTCCAAAAGTCTCTGTCTAGGT +
Preference number: 6 (lower is better)
Translates to: PWEDRNSISAAL*FHCYSKSLCLG
Trigger: ACCTAGACAGAGACTTTTGGAATAACAATGAAAGCACAGTGCAGCAGAAATGGAGTTCCTATCCTCCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000076968.11
ENSMUST00000169121.9
ENSMUST00000223586.2
ENSMUST00000225452.3
ENSMUST00000235303.2
ENSMUST00000237745.2