Pregenerated sensors for SYT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024261Ensembl transcript IDs: ENSMUST00000025110.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGCTCCACAGGTTCCATGGCCTATGACATCAAATGTACATACATaGAGAGGCCGCCTGGCCTCCCCAACTCCACATGACCGCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: QAPQVPWPMTSNVHT*RGRLASPTPHDRSS Trigger: TGAGCTGCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGATGTCATAGGCCATGGAACCTGTGGAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 90 bp | CTGGGTCACCATCAGCTTCCTGCCATTCTGTGGGATACTTGGAAATaGAGTCTCTTGACATTAAAGCTCCAAGCTCCACAGGTTCCATGG | + |
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Preference number: 1 (lower is better) Translates to: LGHHQLPAILWDTWK*SLLTLKLQAPQVPW Trigger: CCATGGAACCTGTGGAGCTTGGAGCTTTAATGTCAAGAGACTTCATTTCCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 90 bp | ACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTaGACTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGT | + |
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Preference number: 1 (lower is better) Translates to: TDSISLTPCFPPDHY*TTTSQNGSVTESHS Trigger: ACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGCACAAAGGAACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATGTCACTGGATGGCGATaGGTGAGGGGAAGGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: CWHKGTDSISLTPCFPPDVTGWR*VRGRHK Trigger: TTTATGCCTTCCCCTCACTCATCGCCATCCAGTGAC...ATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTTCCTTTGTGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACTCCACATGACCGCGCTTCTGACAGGCAGTaGATAATTCAAGACCATGGT | + |
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Preference number: 2 (lower is better) Translates to: SNVHTCRGRLASPTPHDRASDRQ*IIQDHG Trigger: ACCATGGTCTTGAATTATTCACTGCCTGTCAGAAGC...GCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR GCA 90 bp | CTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGTTCCTCGGACATGGTCAAATGTACATACATaGAGAGGCCGCCTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LQQVRTGQLLNHTVPRTWSNVHT*RGRLAS Trigger: GGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGA...CCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR CCA 90 bp | ACATCCTATAACCTGGGTCACCATCAGCTTCCTGCCATTCTGTGGGATACTTGGCAGCTCAAAACAAACTaGCGTCTAAAGACAGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: TSYNLGHHQLPAILWDTWQLKTN*RLKTAK Trigger: CTTCGCTGTCTTTAGACGCCAGTTTGTTTTGAGCTG...CCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCCAGGTTATAGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCTATGACATCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACTGTTTGCTGTATTTATaGAATGAACCTAAGCTACCC | + |
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Preference number: 2 (lower is better) Translates to: MAYDIKCTYMQRPPGLPNCLLYL*NEPKLP Trigger: GGGTAGCTTAGGTTCATTTCATAAATACAGCAAACA...GTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGATGTCATAGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | CTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGTTCCTCGGACATGGTTATTCTCAGACTGCTaGGTAGGCAGAGATGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LQQVRTGQLLNHTVPRTWLFSDC*VGRDVR Trigger: TCTGACATCTCTGCCTACTCAGCAGTCTGAGAATAA...CCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | CTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGTTCCTCGGACATGGTGGGATACTTGGAAATaGAGTCTCTTGACATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: LQQVRTGQLLNHTVPRTWWDTWK*SLLTLK Trigger: CTTTAATGTCAAGAGACTTCATTTCCAAGTATCCCA...CCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR GCA 90 bp | ACATCCTATAACCTGGGTCACCATCAGCTTCCTGCCATTCTGTGGGATACTTGGAGAACACACTGTCTCTaGTATTTTTACAGCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: TSYNLGHHQLPAILWDTWRTHCL*YFYSLT Trigger: AGTTAAGCTGTAAAAATAGCAGAGACAGTGTGTTCT...CCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCCAGGTTATAGGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACAAAACTGAATATCTTATaGAAACTTGGCCAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: HTGFARISELSNWEWHKTKLNIL*KLGQHL Trigger: GAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTT...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | GCAATTGGGAGTGGCACAAGACACGATAATTTAAGCTATCTTAAAAATAACAGCACTACCAAGCAAAACTaGAACCATCACCTACAACAC | + |
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Preference number: 2 (lower is better) Translates to: AIGSGTRHDNLSYLKNNSTTKQN*NHHLQH Trigger: GTGTTGTAGGTGATGGTTTCAGTTTTGCTTGGTAGT...GCTGTTATTTTTAAGATAGCTTAAATTATCGTGTCTTGTGCCACTCCCAATTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAGAGTTTTGTCGTAGTCATAAAAAGCACAGACAAGTGGTTCAGAAATACCCTAAGTCATACTCATaGGTCTCTGATGACTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: KSEFCRSHKKHRQVVQKYPKSYS*VSDDSN Trigger: ATTTGAGTCATCAGAGACTCATGAGTATGACTTAGG...GTATTTCTGAACCACTTGTCTGTGCTTTTTATGACTACGACAAAACTCTGACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAATAAAAGAGGAAAGTAGCTTGCTGTGCTaGAAGCTTACAATCGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: RETEYLMKTWPTPLIKEESSLLC*KLTIVY Trigger: ATACACGATTGTAAGCTTGCAGCACAGCAAGCTACT...TTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR GCA 90 bp | AATACCACACAGAGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAAATAATAAAGTAGCTTaGTGTGCTGCAAGCTTACAA | + |
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Preference number: 2 (lower is better) Translates to: NTTQRETEYLMKTWPTPLNNKVA*CAASLQ Trigger: TTGTAAGCTTGCAGCACAGCAAGCTACTTTATTATT...TAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | TACATGCAGAGGCCGCCTGGCCTCCCCAACTCCACATaGCCGCAGCTCACTCCATGTTATTCTCAGACTGCT | + |
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Preference number: 3 (lower is better) Translates to: YMQRPPGLPNST*PQLTPCYSQTA Trigger: AGCAGTCTGAGAATAACATGGAGTGAGCTGCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR CAA 90 bp | TCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACTCCACATGACCGCGTGGTTGACTTCAACTaGACAATGAATTCCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: SNVHTCRGRLASPTPHDRVVDFN*TMNSTS Trigger: ACTTGTGGAATTCATTGTCAAGTTGAAGTCAACCAC...GCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | CTACTGAACTACAACAAGTCAGAACGGGTCAGTTACTaGATCACACAGTTCCTCGGACATGGTAACCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: LLNYNKSERVSY*ITQFLGHGNLP Trigger: CGGGAGGTTACCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAGTTCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | ATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTaGACTACAACAAGTCAGAACGGGTCAGTTACTGAA | + |
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Preference number: 3 (lower is better) Translates to: ISLTPCFPPDHY*TTTSQNGSVTE Trigger: TTCAGTAACTGACCCGTTCTGACTTGTTGTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR GCA 72 bp | AAAGACATTGCCATTGAATTAAGTCTTCCCAGGAAATaGCAGAGCTCTGCTCGCCTCACACAGGTTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: KDIAIELSLPRK*QSSARLTQVLQ Trigger: TTGCAAAACCTGTGTGAGGCGAGCAGAGCTCTGGCATTTCCTGGGAAGACTTAATTCAATGGCAATGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR CCA 72 bp | CTCTTGACATTAAAGCTCCAAGCTCCACAGGTTCCATaGCCTATGACATCAAATGTACATACATGCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LLTLKLQAPQVP*PMTSNVHTCRG Trigger: GCCTCTGCATGTATGTACATTTGATGTCATAGGCCATGGAACCTGTGGAGCTTGGAGCTTTAATGTCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | TCTAACAATCACCTGATTTCCACTACCAAGCAAAACTaGAACCATCACCTACAACACACATCTGTGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: SNNHLISTTKQN*NHHLQHTSVTR Trigger: CCTTGTCACAGATGTGTGTTGTAGGTGATGGTTTCAGTTTTGCTTGGTAGTGGAAATCAGGTGATTGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | AAGGTGTGGTTCTCATTTTTAACTCTAACAATCACCTaGTTTCCACTACCAAGCAAAACTGAAACCATCACC | + |
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Preference number: 3 (lower is better) Translates to: KVWFSFLTLTIT*FPLPSKTETIT Trigger: GGTGATGGTTTCAGTTTTGCTTGGTAGTGGAAATCAGGTGATTGTTAGAGTTAAAAATGAGAACCACACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTCAGAGTTTTGTCGTAGTCATAAAAAGCACAGACAAGTGGTTCAGAAATACGGGGGAAAGACAATCTaGAAAATACACTTGTACACT | + |
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Preference number: 3 (lower is better) Translates to: KSEFCRSHKKHRQVVQKYGGKTI*KIHLYT Trigger: AGTGTACAAGTGTATTTTCAAGATTGTCTTTCCCCC...GTATTTCTGAACCACTTGTCTGTGCTTTTTATGACTACGACAAAACTCTGACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | AGTAGCCATGTCTACTCTGAGGGGGAAAGACAATCTTaGAAATACACTTGTACACTGATAGATTTTTATATT | + |
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Preference number: 3 (lower is better) Translates to: SSHVYSEGERQS*KYTCTLIDFYI Trigger: AATATAAAAATCTATCAGTGTACAAGTGTATTTTCAAGATTGTCTTTCCCCCTCAGAGTAGACATGGCTACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR TCA 72 bp | ATATTTAATAATTCGGCTGGACCTAAGTCATACTCATaGGTCTCTGATGACTCAAATATAAAGACATTGCCA | + |
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Preference number: 3 (lower is better) Translates to: IFNNSAGPKSYS*VSDDSNIKTLP Trigger: TGGCAATGTCTTTATATTTGAGTCATCAGAGACTCATGAGTATGACTTAGGTCCAGCCGAATTATTAAATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR CCA 72 bp | ACCACACAGAGGGAAACTGAATATCTTATGAAAACTTaGCCAACACCTCTAATAAAAGAGGAAATTATCATA | + |
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Preference number: 3 (lower is better) Translates to: TTQRETEYLMKT*PTPLIKEEIII Trigger: TATGATAATTTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | TCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACTCCACATGACCGCTTGGCTGATCTTCTCTaGCAGCAGATCCAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SNVHTCRGRLASPTPHDRLADLL*QQIQAK Trigger: CTTTGCCTGGATCTGCTGTCAGAGAAGATCAGCCAA...GCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | ACATCCTATAACCTGGGTCACCATCAGCTTCCTGCCATTCTGTGGGATACTTGGCGCTTCCTTCTGCTGTaGCACCCAGGACCAACCGTC | + |
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Preference number: 4 (lower is better) Translates to: TSYNLGHHQLPAILWDTWRFLLL*HPGPTV Trigger: GACGGTTGGTCCTGGGTGCCACAGCAGAAGGAAGCG...CCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCCAGGTTATAGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACGGTCCAGCGTCTTCCTaGGCACTCTGGTCTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYGPASS*ALWSSL Trigger: GAGTGAAGACCAGAGTGCTCAGGAAGACGCTGGACC...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | TGCTGGCACAAAGGAACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATTGCCAGCTTTGGGGTTaGCTTTGGGGAAGTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CWHKGTDSISLTPCFPPDCQLWG*LWGSCH Trigger: ATGGCAACTTCCCCAAAGCCAACCCCAAAGCTGGCA...ATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTTCCTTTGTGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | TGCTGGCACAAAGGAACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATAGCTCTCAGGGGAATTaGCCTCCTTTTCTGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: CWHKGTDSISLTPCFPPDSSQGN*PPFLSP Trigger: CGGAGACAGAAAAGGAGGCCAATTCCCCTGAGAGCT...ATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTTCCTTTGTGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | ATGGCCTATGACATCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACATGGCTGGTAAGCCCTaGGCTTCCTTGATGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: MAYDIKCTYMQRPPGLPNMAGKP*ASLMFT Trigger: GGTGAACATCAAGGAAGCCCAGGGCTTACCAGCCAT...GTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGATGTCATAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR GCA 90 bp | ACATCCTATAACCTGGGTCACCATCAGCTTCCTGCCATTCTGTGGGATACTTGGCCAGATCAGAAGAGCTaGCAGCTTTGGGGTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TSYNLGHHQLPAILWDTWPDQKS*QLWGWL Trigger: AAGCCAACCCCAAAGCTGGCAGCTCTTCTGATCTGG...CCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCCAGGTTATAGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | CTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGTTCCTCGGACATGGTGGGGAAGTTGCCATTaGGGTCTCGCTTCTCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LQQVRTGQLLNHTVPRTWWGSCH*GLASLG Trigger: ACCTAGAGAAGCGAGACCTCAATGGCAACTTCCCCA...CCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | CTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGTTCCTCGGACATGGGTTTCTCCTCTGACGTaGGGGAAGTGCTGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LQQVRTGQLLNHTVPRTWVSPLT*GKCWTS Trigger: TGAAGTCCAGCACTTCCCTCACGTCAGAGGAGAAAC...CCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR GCA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACACCCACCGCTTCCTTCTaGTGTGGCACCCAGGACCAA | + |
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Preference number: 4 (lower is better) Translates to: HTGFARISELSNWEWHKTPTASF*CGTQDQ Trigger: TTGGTCCTGGGTGCCACAGCAGAAGGAAGCGGTGGG...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACGGTACAGGTTCACTTTaGCGTAGGGATCTGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYGTGSL*RRDLKV Trigger: GACTTTCAGATCCCTACGTCAAAGTGAACCTGTACC...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR GCA 90 bp | TCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACTCCACATGACCGCCTCCAAACTTCTTTTTaGTACTTAGGTTTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SNVHTCRGRLASPTPHDRLQTSF*YLGFLG Trigger: ACCCAGAAAACCTAAGTAGCAAAAAGAAGTTTGGAG...GCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR GCA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACACAGATCTCCTTCCAGTaGCCCCCACCGCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HTGFARISELSNWEWHKTQISFQ*PPPLPS Trigger: AGAAGGAAGCGGTGGGGGGCACTGGAAGGAGATCTG...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR CAA 72 bp | AGGAAATGCCAGAGCTCTGCTCGCCTCACACAGGTTTaGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RKCQSSARLTQV*QEFQNLAIGSG Trigger: GCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTGAGGCGAGCAGAGCTCTGGCATTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACCTTGTTGGATTTGGCTaGTCTTCTCTGACAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYLVGFG*SSLTAD Trigger: ATCTGCTGTCAGAGAAGATCAGCCAAATCCAACAAG...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACGAGTCTTGTTGGATTTaGCTGATCTTCTCTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYESCWI*LIFSDS Trigger: GCTGTCAGAGAAGATCAGCCAAATCCAACAAGACTC...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACCTCCGTAAAGAGCTTTaGGGTGACATTTTCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYLRKEL*GDIFQI Trigger: GATCTGGAAAATGTCACCCCAAAGCTCTTTACGGAG...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR TCA 90 bp | ATGGCCTATGACATCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACGGATTCCATAGAATGTaGAGGTTTCATCAAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: MAYDIKCTYMQRPPGLPNGFHRM*RFHQKQ Trigger: CTGTTTTTGATGAAACCTTCACATTCTATGGAATCC...GTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGATGTCATAGGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACATGGAGGAGTCTTGTTaGATTTGGCTGATCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYMEESC*IWLIFS Trigger: AGAGAAGATCAGCCAAATCCAACAAGACTCCTCCAT...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| 3UTR CAA 72 bp | GGGTCACCATCAGCTTCCTGCCATTCTGTGGGATACTaGGAAATGAAGTCTCTTGACATTAAAGCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPSASCHSVGY*EMKSLDIKAPS Trigger: GCTTGGAGCTTTAATGTCAAGAGACTTCATTTCCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR TCA 90 bp | GCAATTGGGAGTGGCACAAGACACGATAATTTAAGCTATCTTAAAAATAACAGCCGAGGCCAAAAGCACTaGAGATGCCCACCACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIGSGTRHDNLSYLKNNSRGQKH*RCPPLW Trigger: CCACAGTGGTGGGCATCTTCAGTGCTTTTGGCCTCG...GCTGTTATTTTTAAGATAGCTTAAATTATCGTGTCTTGTGCCACTCCCAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR TCA 90 bp | AACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATCACTACTGAACTACCCAAGAATTCAACACTaGTTTCTTCAAGACTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRQHLPNTMLPSGSLLNYPRIQH*FLQDSH Trigger: GTGAGAGTCTTGAAGAAATCAGTGTTGAATTCTTGG...GTAGTTCAGTAGTGATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR GCA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACATCAGAGGTCATGGATTaGTCGTCCATGGCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTGFARISELSNWEWHKTSEVMD*SSMAGK Trigger: CTTACCAGCCATGGACGAGCAATCCATGACCTCTGA...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | TCTGACAACTTCACAATGGTAAATAGGAGTATCTTAGGCCACACTGAGGCTTCTTTCTCTAGGTCAAGATaGAGGGAAAGGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDNFTMVNRSILGHTEASFSRSR*RERLGR Trigger: TCTGCCCAACCTTTCCCTGCATCTTGACCTAGAGAA...AGAAGCCTCAGTGTGGCCTAAGATACTCCTATTTACCATTGTGAAGTTGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | AAATGCCAGAGCTCTGCTCGCCTCACACAGGTTTTGCAAGAATTTCAGAACTTACCATCACAGAGCATGTaGCACTTAGCAATTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCQSSARLTQVLQEFQNLPSQSM*HLAICL Trigger: GAGACAAATTGCTAAGTGGCACATGCTCTGTGATGG...TAAGTTCTGAAATTCTTGCAAAACCTGTGTGAGGCGAGCAGAGCTCTGGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR TCA 90 bp | AATACCACACAGAGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAAGCCCTGGGCTTCCTTaGTGTTCACCACAAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTTQRETEYLMKTWPTPLSPGLP*CSPQML Trigger: AAGCATTTGTGGTGAACATCAAGGAAGCCCAGGGCT...TAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CCA 90 bp | AGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAATAAAAGAGGAAACGGGTCAGAGGTCATaGATTGCTCGTCCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RETEYLMKTWPTPLIKEETGQRS*IARPWL Trigger: CAGCCATGGACGAGCAATCCATGACCTCTGACCCGT...TTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR TCA 90 bp | TCTGACAACTTCACAATGGTAAATAGGAGTATCTTAGGCCACACTGAGGCTTCTGTAAGATTGTCATTTTaGTGTACGGGTCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDNFTMVNRSILGHTEASVRLSF*CTGQRS Trigger: TGACCTCTGACCCGTACATCAAAATGACAATCTTAC...AGAAGCCTCAGTGTGGCCTAAGATACTCCTATTTACCATTGTGAAGTTGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | TCTGACAACTTCACAATGGTAAATAGGAGTATCTTAGGCCACACTGAGGCTTCTCAGTTCATTGAACACTaGGTTGGGAGTGCATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDNFTMVNRSILGHTEASQFIEH*VGSAFL Trigger: AAGAAATGCACTCCCAACGCAGTGTTCAATGAACTG...AGAAGCCTCAGTGTGGCCTAAGATACTCCTATTTACCATTGTGAAGTTGTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CCA 90 bp | AATACCACACAGAGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAAGATGCCCACCACTGTaGGAATTTCATCGAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTTQRETEYLMKTWPTPLRCPPL*EFHRIP Trigger: TGGAATTCGATGAAATTCCCACAGTGGTGGGCATCT...TAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CCA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACAGTGCACAAACTTGTATaGAGGAGTCTTGTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTGFARISELSNWEWHKTVHKLV*RSLVGF Trigger: AAATCCAACAAGACTCCTCCATACAAGTTTGTGCAC...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGAGTTTTGTCGTAGTCATAAAAAGCACAGACAAGTGGTTCAGAAATACTTTGACGTAGGGATCTaGAAGTCCAGACACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSEFCRSHKKHRQVVQKYFDVGI*KSRHIR Trigger: TCTGATGTGTCTGGACTTTCAGATCCCTACGTCAAA...GTATTTCTGAACCACTTGTCTGTGCTTTTTATGACTACGACAAAACTCTGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTGCAAGCTTACAATCGTGTATAAGAAAGAAAATTGCTTCTTGCCTAGTACTCCTTTAAGCACGTaGACAAACTTGTATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCCKLTIVYKKENCFLPSTPLST*TNLYGG Trigger: TCCTCCATACAAGTTTGTGCACGTGCTTAAAGGAGT...ACTAGGCAAGAAGCAATTTTCTTTCTTATACACGATTGTAAGCTTGCAGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | AATACCACACAGAGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTACTGGTCTTCACTCTGTaGTTCTTCTCTGGTAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NTTQRETEYLMKTWPTPLLVFTL*FFSGKI Trigger: AATCTTACCAGAGAAGAAGCACAGAGTGAAGACCAG...TAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | GCAATTGGGAGTGGCACAAGACACGATAATTTAAGCTATCTTAAAAATAACAGCCTCAGAACTGTAAAGTaGAAGGAGAGCTCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AIGSGTRHDNLSYLKNNSLRTVK*KESSWM Trigger: CATCCAAGAGCTCTCCTTGCACTTTACAGTTCTGAG...GCTGTTATTTTTAAGATAGCTTAAATTATCGTGTCTTGTGCCACTCCCAATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR GCA 90 bp | GCAATTGGGAGTGGCACAAGACACGATAATTTAAGCTATCTTAAAAATAACAGCGATGTTCACCACAAATaGTTTCTTCTCGAAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIGSGTRHDNLSYLKNNSDVHHK*FLLEVV Trigger: TACAACTTCGAGAAGAAAGCATTTGTGGTGAACATC...GCTGTTATTTTTAAGATAGCTTAAATTATCGTGTCTTGTGCCACTCCCAATTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS TCA 90 bp | CAGAAGAGCTGCCAGCTTTGGGGTTGGCTTTGGGGAAGTTGCCATTaGGGTCTCGCTTCTCTAGGTCAAGATGCAGGGAAAGGTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QKSCQLWGWLWGSCH*GLASLGQDAGKGWA Trigger: TGCCCAACCTTTCCCTGCATCTTGACCTAGAGAAGCGAGACCTCAATGGCAACTTCCCCAAAGCCAACCCCAAAGCTGGCAGCTCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | TCAAATGTACATACATGCAGAGGCCGCCTGGCCTCCCCAACTCCACATGACCGCGTGCCACTTAGCAATTaGTCTCCTGGGGAAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SNVHTCRGRLASPTPHDRVPLSN*SPGEVT Trigger: TGTGACTTCCCCAGGAGACAAATTGCTAAGTGGCAC...GCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTGCATGTATGTACATTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS GCA 90 bp | GCTTTGGGGAAGTTGCCATTGAGGTCTCGCTTCTCTAGGTCAAGATaGAGGGAAAGGTTGGGCAGAGCGGCTTTACCCTTCACTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGKLPLRSRFSRSR*RERLGRAALPFTSL Trigger: GAGTGAAGTGAAGGGTAAAGCCGCTCTGCCCAACCTTTCCCTGCATCTTGACCTAGAGAAGCGAGACCTCAATGGCAACTTCCCCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGCACAAAGGAACAGACAGCATCTCCCTAACACCATGCTTCCCTCCGGATTATGGAGGAGTCTTGTaGGATTTGGCTGATCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWHKGTDSISLTPCFPPDYGGVL*DLADLL Trigger: GAGAAGATCAGCCAAATCCAACAAGACTCCTCCATA...ATCCGGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTTCCTTTGTGCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CAA 90 bp | TCTGACAACTTCACAATGGTAAATAGGAGTATCTTAGGCCACACTGAGGCTTCTGAAGAGCTGCCAGCTTaGGGGTTGGCTTTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SDNFTMVNRSILGHTEASEELPA*GLALGK Trigger: CTTCCCCAAAGCCAACCCCAAAGCTGGCAGCTCTTC...AGAAGCCTCAGTGTGGCCTAAGATACTCCTATTTACCATTGTGAAGTTGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS TCA 90 bp | ACAAACTTGTATGGAGGAGTCTTGTTGGATTTGGCTGATCTTCTCTaGCAGCAGATCCAGGCAAAGAGAGAGACAGTGAAGACGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TNLYGGVLLDLADLL*QQIQAKRETVKTRP Trigger: TGGCCTCGTCTTCACTGTCTCTCTCTTTGCCTGGATCTGCTGTCAGAGAAGATCAGCCAAATCCAACAAGACTCCTCCATACAAGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | CTACAACAAGTCAGAACGGGTCAGTTACTGAATCACACAGTTCCTCGGACATGGCCCTTCACTTCACTCTaGTCATCTCCTCCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQQVRTGQLLNHTVPRTWPFTSL*SSPPNF Trigger: GAAGTTTGGAGGAGATGACAAGAGTGAAGTGAAGGG...CCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CAA 90 bp | AAATGCCAGAGCTCTGCTCGCCTCACACAGGTTTTGCAAGAATTTCAGAACTTAAAGCTCTCAGGGGAATaGGCCTCCTTTTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCQSSARLTQVLQEFQNLKLSGE*ASFSVS Trigger: GGAGACAGAAAAGGAGGCCAATTCCCCTGAGAGCTT...TAAGTTCTGAAATTCTTGCAAAACCTGTGTGAGGCGAGCAGAGCTCTGGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CAA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACAGTGCAAGGAGAGCTCTaGGATGTGGGGATAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTGFARISELSNWEWHKTVQGEL*DVGIRD Trigger: ATCCCTTATCCCCACATCCAAGAGCTCTCCTTGCAC...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | GCAATTGGGAGTGGCACAAGACACGATAATTTAAGCTATCTTAAAAATAACAGCCTGCCAGCTTTGGGGTaGGCTTTGGGGAAGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AIGSGTRHDNLSYLKNNSLPALG*ALGKLP Trigger: TGGCAACTTCCCCAAAGCCAACCCCAAAGCTGGCAG...GCTGTTATTTTTAAGATAGCTTAAATTATCGTGTCTTGTGCCACTCCCAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | CACACAGGTTTTGCAAGAATTTCAGAACTTAGCAATTGGGAGTGGCACAAGACAAGCACGTGCACAAACTaGTATGGAGGAGTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTGFARISELSNWEWHKTSTCTN*YGGVLL Trigger: CAACAAGACTCCTCCATACAAGTTTGTGCACGTGCT...TGTCTTGTGCCACTCCCAATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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| CDS-3UTR CAA 90 bp | AAGTCAGAGTTTTGTCGTAGTCATAAAAAGCACAGACAAGTGGTTCAGAAATACGCTTTGGGGTTGGCTTaGGGGAAGTTGCCATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSEFCRSHKKHRQVVQKYALGLA*GKLPLR Trigger: CCTCAATGGCAACTTCCCCAAAGCCAACCCCAAAGC...GTATTTCTGAACCACTTGTCTGTGCTTTTTATGACTACGACAAAACTCTGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTGCAAGCTTACAATCGTGTATAAGAAAGAAAATTGCTTCTTGCCTAGTAAGCCCTGGGCTTCCTaGATGTTCACCACAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCCKLTIVYKKENCFLPSKPWAS*MFTTNA Trigger: AGCATTTGTGGTGAACATCAAGGAAGCCCAGGGCTT...ACTAGGCAAGAAGCAATTTTCTTTCTTATACACGATTGTAAGCTTGCAGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTGCAAGCTTACAATCGTGTATAAGAAAGAAAATTGCTTCTTGCCTAGTGGTAAGATTGTCATTTaGATGTACGGGTCAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCCKLTIVYKKENCFLPSGKIVI*MYGSEV Trigger: GACCTCTGACCCGTACATCAAAATGACAATCTTACC...ACTAGGCAAGAAGCAATTTTCTTTCTTATACACGATTGTAAGCTTGCAGCACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | AATACCACACAGAGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTATCATTGAACACTGCGTaGGGAGTGCATTTCTTAACG | + |
|
Preference number: 5 (lower is better) Translates to: NTTQRETEYLMKTWPTPLSLNTA*GVHFLT Trigger: CGTTAAGAAATGCACTCCCAACGCAGTGTTCAATGA...TAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS GCA 90 bp | AAGACTCTCACAAGGAATATCAAAGACAAACAGTTCATTGAACACTaGGTTGGGAGTGCATTTCTTAACGTGAGTCTTCTTTTTAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KTLTRNIKDKQFIEH*VGSAFLNVSLLFRD Trigger: ATCTCTAAAAAGAAGACTCACGTTAAGAAATGCACTCCCAACGCAGTGTTCAATGAACTGTTTGTCTTTGATATTCCTTGTGAGAGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | AGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAATAAAAGAGGAATTGTATGGAGGAGTCTaGTTGGATTTGGCTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RETEYLMKTWPTPLIKEELYGGV*LDLADL Trigger: AAGATCAGCCAAATCCAACAAGACTCCTCCATACAA...TTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS-3UTR CAA 90 bp | AGGGAAACTGAATATCTTATGAAAACTTGGCCAACACCTCTAATAAAAGAGGAATTAGAGATTCTCTTCTaGGCATGGTACAGGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RETEYLMKTWPTPLIKEELEILF*AWYRFT Trigger: AGTGAACCTGTACCATGCCAAGAAGAGAATCTCTAA...TTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS CAA 72 bp | TCCAGATCAGAAGAGCTGCCAGCTTTGGGGTTGGCTTaGGGGAAGTTGCCATTGAGGTCTCGCTTCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSEELPALGLA*GKLPLRSRFSR Trigger: CCTAGAGAAGCGAGACCTCAATGGCAACTTCCCCAAAGCCAACCCCAAAGCTGGCAGCTCTTCTGATCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS CCA 72 bp | GGTCTCGCTTCTCTAGGTCAAGATGCAGGGAAAGGTTaGGCAGAGCGGCTTTACCCTTCACTTCACTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLASLGQDAGKG*AERLYPSLHSC Trigger: ACAAGAGTGAAGTGAAGGGTAAAGCCGCTCTGCCCAACCTTTCCCTGCATCTTGACCTAGAGAAGCGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS CCA 72 bp | GAGGTCATGGATTGCTCGTCCATGGCTGGTAAGCCCTaGGCTTCCTTGATGTTCACCACAAATGCTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EVMDCSSMAGKP*ASLMFTTNAFF Trigger: GAAGAAAGCATTTGTGGTGAACATCAAGGAAGCCCAGGGCTTACCAGCCATGGACGAGCAATCCATGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS GCA 72 bp | GGATCTGAAAGTCCAGACACATCAGATTTCGGTAGGTaGCGCGCTTTTAAGACCACCACAGTGAGCGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GSESPDTSDFGR*RAFKTTTVSVF Trigger: AAACACGCTCACTGTGGTGGTCTTAAAAGCGCGGCACCTACCGAAATCTGATGTGTCTGGACTTTCAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS TCA 72 bp | TATGGAGGAGTCTTGTTGGATTTGGCTGATCTTCTCTaGCAGCAGATCCAGGCAAAGAGAGAGACAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YGGVLLDLADLL*QQIQAKRETVK Trigger: CTTCACTGTCTCTCTCTTTGCCTGGATCTGCTGTCAGAGAAGATCAGCCAAATCCAACAAGACTCCTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS CCA 72 bp | CGTGCACAAACTTGTATGGAGGAGTCTTGTTGGATTTaGCTGATCTTCTCTGACAGCAGATCCAGGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RAQTCMEESCWI*LIFSDSRSRQR Trigger: TCTTTGCCTGGATCTGCTGTCAGAGAAGATCAGCCAAATCCAACAAGACTCCTCCATACAAGTTTGTGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
||
| CDS TCA 72 bp | TCACTCTGTGCTTCTTCTCTGGTAAGATTGTCATTTTaGTGTACGGGTCAGAGGTCATGGATTGCTCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLCASSLVRLSF*CTGQRSWIARP Trigger: TGGACGAGCAATCCATGACCTCTGACCCGTACATCAAAATGACAATCTTACCAGAGAAGAAGCACAGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025110.5 |
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