Pregenerated sensors for SYT3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030731

Ensembl transcript IDs: ENSMUST00000118831.8, ENSMUST00000118962.8, ENSMUST00000120262.2, ENSMUST00000130707.8, ENSMUST00000130844.3

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CTTAGTGGCCTAGTCACACACACTCTCAGGATCCAGCACACCTCCTaGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGTGTGTTTA	+
Preference number: 1 (lower is better) Translates to: LSGLVTHTLRIQHTS*PQGDRWDETHRVCL Trigger: TAAACACACTCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGACTAGGCCACTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR TCA 90 bp	TGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGACATTCACAGTaGGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGAG	+
Preference number: 1 (lower is better) Translates to: CLFRGHQGLVCRHSQ*GHRPEQQDLDNSKE Trigger: CTCTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCCTGAACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
3UTR-3UTR GCA 90 bp	AGTGGCCTAGTCACACACACTCTCAGGATCCAGCACACCTCCTGGCCCCAGGGAACAGGGAGCTGGGCCTaGTGCCTCCTAGCCTCACAC	+
Preference number: 2 (lower is better) Translates to: SGLVTHTLRIQHTSWPQGTGSWA*CLLASH Trigger: GTGTGAGGCTAGGAGGCAGCAGGCCCAGCTCCCTGT...TCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGACTAGGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGCCGCTCGGACATTATaGCTTCGAGGAGATGAGTTC	+
Preference number: 2 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAAARTL*LRGDEF Trigger: GAACTCATCTCCTCGAAGCCATAATGTCCGAGCGGC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
3UTR-3UTR CCA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCTGAAACAGGGAGCTaGGCCTGCTGCCTCCTAGCC	+
Preference number: 2 (lower is better) Translates to: PLGGTLGIRRETMEAEDLPETGS*ACCLLA Trigger: GGCTAGGAGGCAGCAGGCCCAGCTCCCTGTTTCAGG...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
3UTR-3UTR GCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTACAGGGAGCTGGGCCTaGTGCCTCCTAGCCTCACAC	+
Preference number: 2 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSTGSWA*CLLASH Trigger: GTGTGAGGCTAGGAGGCAGCAGGCCCAGCTCCCTGT...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
3UTR-3UTR CCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTCCTGAAACAGGGAGCTaGGCCTGCTGCCTCCTAGCC	+
Preference number: 2 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSPETGS*ACCLLA Trigger: GGCTAGGAGGCAGCAGGCCCAGCTCCCTGTTTCAGG...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
3UTR-3UTR TCA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAGAGGACCTCCCACCCTaGAACAGGGAGCTGGGCCTG	+
Preference number: 2 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTEDLPP*NRELGL Trigger: CAGGCCCAGCTCCCTGTTTCAGGGTGGGAGGTCCTC...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
3UTR-3UTR CCA 90 bp	AGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGCCGCTCGGACATTATaGCTTCGAGGAGATGAGTTC	+
Preference number: 2 (lower is better) Translates to: RIQHTSWPQGDRWDETHRAARTL*LRGDEF Trigger: GAACTCATCTCCTCGAAGCCATAATGTCCGAGCGGC...TCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR-3UTR TCA 90 bp	CACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGTGTGTTTATGTCGACATTCACAGTaGGGACACAGGCCAGAACAG	+
Preference number: 2 (lower is better) Translates to: HTSWPQGDRWDETHRVCLCRHSQ*GHRPEQ Trigger: CTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACA...TAAACACACTCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR-3UTR TCA 90 bp	TTTCTGTCACTTCATCTAATTTCAGTTGGAAATCCTGTTGTGGTTTCCATCCGTGAGGACCTCCCACCCTaGAACAGGGAGCTGGGCCTG	+
Preference number: 2 (lower is better) Translates to: FLSLHLISVGNPVVVSIREDLPP*NRELGL Trigger: CAGGCCCAGCTCCCTGTTTCAGGGTGGGAGGTCCTC...ACGGATGGAAACCACAACAGGATTTCCAACTGAAATTAGATGAAGTGACAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR CCA 72 bp	CTAGTCACACACACTCTCAGGATCCAGCACACCTCCTaGCCCCAGGGAGACAGGTGGGATGAGACTCACAGA	+
Preference number: 3 (lower is better) Translates to: LVTHTLRIQHTS*PQGDRWDETHR Trigger: TCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR CCA 72 bp	AGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTaGGATGAGACTCACAGAGTGTGTTTATTTCTGGTG	+
Preference number: 3 (lower is better) Translates to: RIQHTSWPQGDR*DETHRVCLFLV Trigger: CACCAGAAATAAACACACTCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
3UTR CCA 72 bp	ACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTaGTCTGTCGACATTCACAGTGAGGACACAGGCCAG	+
Preference number: 3 (lower is better) Translates to: TGGCVCSGDIKD*SVDIHSEDTGQ Trigger: CTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCATGGGTCGGCAGCCTCTaGACCCACGCGGCACACCCC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAWVGSL*THAAHP Trigger: GGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCA...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTGCAGCTTGCGCTGTaGCAGCTCGGCCAGGGGCAC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVQLAL*QLGQGH Trigger: GTGCCCCTGGCCGAGCTGGCACAGCGCAAGCTGCAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGGGCCGAGGCAGGGCTaGGTACCTTGTGGTGGGTGC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAGPRQG*VPCGGC Trigger: GCACCCACCACAAGGTACCCAGCCCTGCCTCGGCCC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTGGTCAGGGTCTGCTaGGTGAGGGGCCGAGGCAGG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVVRVC*VRGRGR Trigger: CCTGCCTCGGCCCCTCACCCAGCAGACCCTGACCAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGGTCTGAGACCAGGATaGGCGCCCGCCGACAGAGGT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAGLRPG*APADRG Trigger: ACCTCTGTCGGCGGGCGCTCATCCTGGTCTCAGACC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACCGTGCACAGAGGTCTaGGACCAGGATGAGCGCCCG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAPCTEV*DQDERP Trigger: CGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAACCGGAGGGCAAAACTaGTGCGGCCACAGGGTGCCC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPATGGQN*CGHRVP Trigger: GGGCACCCTGTGGCCGCATCAGTTTTGCCCTCCGGT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTAAGCCCCCACCACTaGGAGGCAGCAGGAGCAGCC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVSPHH*EAAGAA Trigger: GGCTGCTCCTGCTGCCTCCCAGTGGTGGGGGCTTAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGCCACCACCCACTGCTaGGCCTCCTTTGTCCCTCCA	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAATTHC*ASFVPP Trigger: TGGAGGGACAAAGGAGGCTCAGCAGTGGGTGGTGGC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGACGCCGCCCCTCGCTaGTCAGAGAGGCCTTCACAT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPADAAPR*SERPSH Trigger: ATGTGAAGGCCTCTCTGATCAGCGAGGGGCGGCGTC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACAGGGGCTAAGTCTTTaGGCAGGGGGCCACCACCCA	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAQGLSL*AGGHHP Trigger: TGGGTGGTGGCCCCCTGCGCAAAGACTTAGCCCCTG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACTGGCTCCTAGGTGGTaGCCACCACCTCCTACCAGG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPALAPRW*PPPPTR Trigger: CCTGGTAGGAGGTGGTGGGCACCACCTAGGAGCCAG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACTGCCCAGTGTTCTCTaGCGTGTGGGTCGGCAGCCT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPALPSVL*RVGRQP Trigger: AGGCTGCCGACCCACACGGCAGAGAACACTGGGCAG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAAGGCTGGCTCCTAGGTaGTGCCCACCACCTCCTACC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPARLAPR*CPPPPT Trigger: GGTAGGAGGTGGTGGGCACCACCTAGGAGCCAGCCT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTGCCCATGATGGTGTaGGCCACCCAGCAGGGGATG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVPMMV*ATQQGM Trigger: CATCCCCTGCTGGGTGGCCCACACCATCATGGGCAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	TCACACACACTCTCAGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGACCGGAGGGCAAAACTaGTGCGGCCACAGGGTGCCC	+
Preference number: 4 (lower is better) Translates to: SHTLSGSSTPPGPRETGGTGGQN*CGHRVP Trigger: GGGCACCCTGTGGCCGCATCAGTTTTGCCCTCCGGT...CCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACTACCACTGCGATGCTaGGACCCACGTTCTCCACGC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPALPLRC*DPRSPR Trigger: GCGTGGAGAACGTGGGTCTCAGCATCGCAGTGGTAG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGACCACCGGGTCCAGTaGCCTGGTACAGCTCTGGTT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPADHRVQ*PGTALV Trigger: AACCAGAGCTGTACCAGGGCACTGGACCCGGTGGTC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGATGAGACTGGGCACTaGGTAAGCCCCCACCACTGG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPADETGH*VSPHHW Trigger: CCAGTGGTGGGGGCTTACCCAGTGCCCAGTCTCATC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	TCACACACACTCTCAGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGGCCACCACCCACTGCTaGGCCTCCTTTGTCCCTCCA	+
Preference number: 4 (lower is better) Translates to: SHTLSGSSTPPGPRETGGATTHC*ASFVPP Trigger: TGGAGGGACAAAGGAGGCTCAGCAGTGGGTGGTGGC...CCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR TCA 90 bp	TCACACACACTCTCAGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGGACGCCGCCCCTCGCTaGTCAGAGAGGCCTTCACAT	+
Preference number: 4 (lower is better) Translates to: SHTLSGSSTPPGPRETGGDAAPR*SERPSH Trigger: ATGTGAAGGCCTCTCTGATCAGCGAGGGGCGGCGTC...CCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACCCATTGGAGTCCTTTaGTGGGAGATCCAGGGCCTG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAPIGVL*WEIQGL Trigger: CAGGCCCTGGATCTCCCAGCAAAGGACTCCAATGGG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACAGCAGCTCCGCAAATaGTGGATGGTGGGCTGTGTG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAQQLRK*WMVGCV Trigger: CACACAGCCCACCATCCACCATTTGCGGAGCTGCTG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACCGGGTCCAGTGCCCTaGTACAGCTCTGGTTTGATC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAPGPVP*YSSGLI Trigger: GATCAAACCAGAGCTGTACCAGGGCACTGGACCCGG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCTGGGTCGGCAGCCTCTaGACCCACGCGGCACACCCC	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPWVGSL*THAAHP Trigger: GGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCA...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACACAGAATGTCACGATaGCTGACAGCAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAHRMSR*LTAGSR Trigger: CCGTGAGCCTGCTGTCAGTCATCGTGACATTCTGTG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACGAAGTCATAGACGCTaGAGTGCAGCTTGCGCTGTG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPARSHRR*SAACAV Trigger: CACAGCGCAAGCTGCACTTCAGCGTCTATGACTTCG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAAAACCACCTGGCCAATaGGATCATGCCGCGAGAAGC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAKPPGQ*DHAARS Trigger: GCTTCTCGCGGCATGATCTCATTGGCCAGGTGGTTT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCGTGCAGCTTGCGCTGTaGCAGCTCGGCCAGGGGCAC	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPVQLAL*QLGQGH Trigger: GTGCCCCTGGCCGAGCTGGCACAGCGCAAGCTGCAC...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCATCCTCCACTAGCTGGTaGCAGTGTTCCACAGGCTTG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPASSTSW*QCSTGL Trigger: CAAGCCTGTGGAACACTGGCACCAGCTAGTGGAGGA...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	AGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGATGACCACCGAGGCTaGCTCCTAGGTGGTGCCCAC	+
Preference number: 4 (lower is better) Translates to: RIQHTSWPQGDRWDETHRDDHRG*LLGGAH Trigger: GTGGGCACCACCTAGGAGCCAGCCTCGGTGGTCATC...TCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR CCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCGGGCCGAGGCAGGGCTaGGTACCTTGTGGTGGGTGC	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPGPRQG*VPCGGC Trigger: GCACCCACCACAAGGTACCCAGCCCTGCCTCGGCCC...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCATTCTCCTCCACTAGCTaGTGCCAGTGTTCCACAGGC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAFSSTS*CQCSTG Trigger: GCCTGTGGAACACTGGCACCAGCTAGTGGAGGAGAA...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCCCGTGCACAGAGGTCTaGGACCAGGATGAGCGCCCG	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPPCTEV*DQDERP Trigger: CGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGG...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCGTGCACAGAGGTCTaGGACCAGGATGAGCGCCCG	+
Preference number: 4 (lower is better) Translates to: PLGGTLGIRRETMEAEDLPCTEV*DQDERP Trigger: CGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGG...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGCAACAGGTAGATCTTaGCGTAGGGGTCTGAGAACC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAATGRS*RRGLRT Trigger: GGTTCTCAGACCCCTACGTCAAGATCTACCTGTTGC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAAGGGGCACCGAGAACTaGAACGTCTCGTTGAAGATG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPARGTEN*NVSLKM Trigger: CATCTTCAACGAGACGTTTCAGTTCTCGGTGCCCCT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAAGCAGAGAGAGAAGTTaGGCTCTCCGAGATCTGCCT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPASRERS*ALRDLP Trigger: AGGCAGATCTCGGAGAGCTCAACTTCTCTCTCTGCT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAAGCTCAGGGGATGTCTaGCTTGGTTTGACTCCAGCA	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPASSGDV*LGLTPA Trigger: TGCTGGAGTCAAACCAAGCCAGACATCCCCTGAGCT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCGTAAGCCCCCACCACTaGGAGGCAGCAGGAGCAGCC	+
Preference number: 4 (lower is better) Translates to: PLGGTLGIRRETMEAEDLVSPHH*EAAGAA Trigger: GGCTGCTCCTGCTGCCTCCCAGTGGTGGGGGCTTAC...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGCCCTGGTACAGCTCTaGTTTGATCTGACCGATGAG	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAALVQL*FDLTDE Trigger: CTCATCGGTCAGATCAAACCAGAGCTGTACCAGGGC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGAATGTCACGATGACTaGCAGCAGGCTCACGGAAAT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAECHDD*QQAHGN Trigger: ATTTCCGTGAGCCTGCTGTCAGTCATCGTGACATTC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCGCCACCACCCACTGCTaGGCCTCCTTTGTCCCTCCA	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPATTHC*ASFVPP Trigger: TGGAGGGACAAAGGAGGCTCAGCAGTGGGTGGTGGC...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACTTCACATAGGGGTCTaGGAAACCAGTGAGGTCCAT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPALHIGV*ETSEVH Trigger: ATGGACCTCACTGGTTTCTCAGACCCCTATGTGAAG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	GCCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTGACGCCGCCCCTCGCTaGTCAGAGAGGCCTTCACAT	+
Preference number: 4 (lower is better) Translates to: ASRGNSGDKKRDNGGRGPDAAPR*SERPSH Trigger: ATGTGAAGGCCTCTCTGATCAGCGAGGGGCGGCGTC...AGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACTTTGCCACCCTTTGTaGAGCTGCTCAGAGTCTTCT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPALCHPL*SCSESS Trigger: AGAAGACTCTGAGCAGCTTCACAAAGGGTGGCAAAG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	GCCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCAGGGGCTAAGTCTTTaGGCAGGGGGCCACCACCCA	+
Preference number: 4 (lower is better) Translates to: ASRGNSGDKKRDNGGRGPQGLSL*AGGHHP Trigger: TGGGTGGTGGCCCCCTGCGCAAAGACTTAGCCCCTG...AGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTCATAGTCTACCACTaGGATGCTGAGACCCACGTT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVIVYH*DAETHV Trigger: AACGTGGGTCTCAGCATCGCAGTGGTAGACTATGAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	GCCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTAGGCTGGCTCCTAGGTaGTGCCCACCACCTCCTACC	+
Preference number: 4 (lower is better) Translates to: ASRGNSGDKKRDNGGRGPRLAPR*CPPPPT Trigger: GGTAGGAGGTGGTGGGCACCACCTAGGAGCCAGCCT...AGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCGTGCCCATGATGGTGTaGGCCACCCAGCAGGGGATG	+
Preference number: 4 (lower is better) Translates to: PLGGTLGIRRETMEAEDLVPMMV*ATQQGM Trigger: CATCCCCTGCTGGGTGGCCCACACCATCATGGGCAC...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GGGGACATCAAGGATTGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACGGGCCGAGGCAGGGCTaGGTACCTTGTGGTGGGTGC	+
Preference number: 4 (lower is better) Translates to: GDIKDWSVDIHSEDTGQNGPRQG*VPCGGC Trigger: GCACCCACCACAAGGTACCCAGCCCTGCCTCGGCCC...GTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGGTCTGAGAACCCATTaGAGTCCTTTGCTGGGAGAT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAGLRTH*SPLLGD Trigger: ATCTCCCAGCAAAGGACTCCAATGGGTTCTCAGACC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAACTGAAACGTCTCGTTaGAGATGGGGTTCAACGTCT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPATETSR*RWGSTS Trigger: AGACGTTGAACCCCATCTTCAACGAGACGTTTCAGT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTCAGGGGCTAAGTCTTTaGGCAGGGGGCCACCACCCA	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSQGLSL*AGGHHP Trigger: TGGGTGGTGGCCCCCTGCGCAAAGACTTAGCCCCTG...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGGACCACCGGGTCCAGTaGCCTGGTACAGCTCTGGTT	+
Preference number: 4 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSDHRVQ*PGTALV Trigger: AACCAGAGCTGTACCAGGGCACTGGACCCGGTGGTC...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAGTGCAGCTTGCGCTGTaGCAGCTCGGCCAGGGGCAC	+
Preference number: 4 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTVQLAL*QLGQGH Trigger: GTGCCCCTGGCCGAGCTGGCACAGCGCAAGCTGCAC...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	ACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGTGTGTTTATCTGCCCAGTGTTCTCTaGCGTGTGGGTCGGCAGCCT	+
Preference number: 4 (lower is better) Translates to: TPPGPRETGGMRLTECVYLPSVL*RVGRQP Trigger: AGGCTGCCGACCCACACGGCAGAGAACACTGGGCAG...ATAAACACACTCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR GCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTCTGCCCAGTGTTCTCTaGCGTGTGGGTCGGCAGCCT	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSLPSVL*RVGRQP Trigger: AGGCTGCCGACCCACACGGCAGAGAACACTGGGCAG...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCACTTGACACCTATCATTaGTATCAGCATCTCGGACCC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPALDTYH*YQHLGP Trigger: GGGTCCGAGATGCTGATACCAATGATAGGTGTCAAG...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAGTGGTCAGGGTCTGCTaGGTGAGGGGCCGAGGCAGG	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTAVVRVC*VRGRGR Trigger: CCTGCCTCGGCCCCTCACCCAGCAGACCCTGACCAC...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	TCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAATGGGTCGGCAGCCTCTaGACCCACGCGGCACACCCC	+
Preference number: 4 (lower is better) Translates to: STFTVRTQARTARLGQQQWVGSL*THAAHP Trigger: GGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCA...TTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAACCAGTGAGGTCCATTaGTTTGAGGTTAGAGGCTTT	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPATSEVH*FEVRGF Trigger: AAAGCCTCTAACCTCAAAGCAATGGACCTCACTGGT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCATCTTCCTGTGCACCTTaGTCTGGAACTTCTTTTTGC	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPASSCAP*SGTSFC Trigger: GCAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGA...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR TCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGGGTCTGAGACCAGGATaGGCGCCCGCCGACAGAGGT	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKGLRPG*APADRG Trigger: ACCTCTGTCGGCGGGCGCTCATCCTGGTCTCAGACC...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGCACAGAATGTCACGATaGCTGACAGCAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSHRMSR*LTAGSR Trigger: CCGTGAGCCTGCTGTCAGTCATCGTGACATTCTGTG...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACACTGGCTCCTAGGTGGTaGCCACCACCTCCTACCAGG	+
Preference number: 4 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTLAPRW*PPPPTR Trigger: CCTGGTAGGAGGTGGTGGGCACCACCTAGGAGCCAG...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTCCCATTGGAGTCCTTTaGTGGGAGATCCAGGGCCTG	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSPIGVL*WEIQGL Trigger: CAGGCCCTGGATCTCCCAGCAAAGGACTCCAATGGG...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCATCTGGAACTTCTTTTTaGGATCAGGCAACAGGTAGA	+
Preference number: 4 (lower is better) Translates to: PPSLTPPGEGGVGPGSPASGTSF*DQATGR Trigger: TCTACCTGTTGCCTGATCGCAAAAAGAAGTTCCAGA...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR GCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCTCCTCCACTAGCTGGTaGCAGTGTTCCACAGGCTTG	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPSSTSW*QCSTGL Trigger: CAAGCCTGTGGAACACTGGCACCAGCTAGTGGAGGA...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	TCACACACACTCTCAGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGCTTGACACCTATCATTaGTATCAGCATCTCGGACCC	+
Preference number: 4 (lower is better) Translates to: SHTLSGSSTPPGPRETGGLDTYH*YQHLGP Trigger: GGGTCCGAGATGCTGATACCAATGATAGGTGTCAAG...CCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR CCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGGTAAGCCCCCACCACTaGGAGGCAGCAGGAGCAGCC	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKVSPHH*EAAGAA Trigger: GGCTGCTCCTGCTGCCTCCCAGTGGTGGGGGCTTAC...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	AGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGGTCTGAGAACCCATTaGAGTCCTTTGCTGGGAGAT	+
Preference number: 4 (lower is better) Translates to: RIQHTSWPQGDRWDETHRGLRTH*SPLLGD Trigger: ATCTCCCAGCAAAGGACTCCAATGGGTTCTCAGACC...TCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR TCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCGCAACAGGTAGATCTTaGCGTAGGGGTCTGAGAACC	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPATGRS*RRGLRT Trigger: GGTTCTCAGACCCCTACGTCAAGATCTACCTGTTGC...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GGGGACATCAAGGATTGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACCCCATTGGAGTCCTTTaGTGGGAGATCCAGGGCCTG	+
Preference number: 4 (lower is better) Translates to: GDIKDWSVDIHSEDTGQNPIGVL*WEIQGL Trigger: CAGGCCCTGGATCTCCCAGCAAAGGACTCCAATGGG...GTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGGTGCCCATGATGGTGTaGGCCACCCAGCAGGGGATG	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKVPMMV*ATQQGM Trigger: CATCCCCTGCTGGGTGGCCCACACCATCATGGGCAC...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GCCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTAGCTCAGGGGATGTCTaGCTTGGTTTGACTCCAGCA	+
Preference number: 4 (lower is better) Translates to: ASRGNSGDKKRDNGGRGPSSGDV*LGLTPA Trigger: TGCTGGAGTCAAACCAAGCCAGACATCCCCTGAGCT...AGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAGATGAGACTGGGCACTaGGTAAGCCCCCACCACTGG	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTADETGH*VSPHHW Trigger: CCAGTGGTGGGGGCTTACCCAGTGCCCAGTCTCATC...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCGCCCTGGTACAGCTCTaGTTTGATCTGACCGATGAG	+
Preference number: 4 (lower is better) Translates to: PLGGTLGIRRETMEAEDLALVQL*FDLTDE Trigger: CTCATCGGTCAGATCAAACCAGAGCTGTACCAGGGC...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GGGGACATCAAGGATTGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACCCGGGTCCAGTGCCCTaGTACAGCTCTGGTTTGATC	+
Preference number: 4 (lower is better) Translates to: GDIKDWSVDIHSEDTGQNPGPVP*YSSGLI Trigger: GATCAAACCAGAGCTGTACCAGGGCACTGGACCCGG...GTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	ACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGTGTGTTTATTTCTCCTCCACTAGCTaGTGCCAGTGTTCCACAGGC	+
Preference number: 4 (lower is better) Translates to: TPPGPRETGGMRLTECVYFSSTS*CQCSTG Trigger: GCCTGTGGAACACTGGCACCAGCTAGTGGAGGAGAA...ATAAACACACTCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR TCA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGGAATGTCACGATGACTaGCAGCAGGCTCACGGAAAT	+
Preference number: 4 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSECHDD*QQAHGN Trigger: ATTTCCGTGAGCCTGCTGTCAGTCATCGTGACATTC...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGCAACAGGTAGATCTTaGCGTAGGGGTCTGAGAACC	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSATGRS*RRGLRT Trigger: GGTTCTCAGACCCCTACGTCAAGATCTACCTGTTGC...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GGGGACATCAAGGATTGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAAACCACCTGGCCAATaGGATCATGCCGCGAGAAGC	+
Preference number: 4 (lower is better) Translates to: GDIKDWSVDIHSEDTGQNKPPGQ*DHAARS Trigger: GCTTCTCGCGGCATGATCTCATTGGCCAGGTGGTTT...GTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GCCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCTTCACATAGGGGTCTaGGAAACCAGTGAGGTCCAT	+
Preference number: 4 (lower is better) Translates to: ASRGNSGDKKRDNGGRGPLHIGV*ETSEVH Trigger: ATGGACCTCACTGGTTTCTCAGACCCCTATGTGAAG...AGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	TCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAACTACCACTGCGATGCTaGGACCCACGTTCTCCACGC	+
Preference number: 4 (lower is better) Translates to: STFTVRTQARTARLGQQQLPLRC*DPRSPR Trigger: GCGTGGAGAACGTGGGTCTCAGCATCGCAGTGGTAG...TTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GCCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCTTTGCCACCCTTTGTaGAGCTGCTCAGAGTCTTCT	+
Preference number: 4 (lower is better) Translates to: ASRGNSGDKKRDNGGRGPLCHPL*SCSESS Trigger: AGAAGACTCTGAGCAGCTTCACAAAGGGTGGCAAAG...AGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGCTTTGCCACCCTTTGTaGAGCTGCTCAGAGTCTTCT	+
Preference number: 4 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSLCHPL*SCSESS Trigger: AGAAGACTCTGAGCAGCTTCACAAAGGGTGGCAAAG...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGGACCACCGGGTCCAGTaGCCTGGTACAGCTCTGGTT	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKDHRVQ*PGTALV Trigger: AACCAGAGCTGTACCAGGGCACTGGACCCGGTGGTC...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCACAGCAGCTCCGCAAATaGTGGATGGTGGGCTGTGTG	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTAQQLRK*WMVGCV Trigger: CACACAGCCCACCATCCACCATTTGCGGAGCTGCTG...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACACAGCAGCTCCGCAAATaGTGGATGGTGGGCTGTGTG	+
Preference number: 4 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTQQLRK*WMVGCV Trigger: CACACAGCCCACCATCCACCATTTGCGGAGCTGCTG...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGAATGTCACGATGACTaGCAGCAGGCTCACGGAAAT	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSECHDD*QQAHGN Trigger: ATTTCCGTGAGCCTGCTGTCAGTCATCGTGACATTC...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACACACAGAATGTCACGATaGCTGACAGCAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTHRMSR*LTAGSR Trigger: CCGTGAGCCTGCTGTCAGTCATCGTGACATTCTGTG...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCACTGAAACGTCTCGTTaGAGATGGGGTTCAACGTCT	+
Preference number: 4 (lower is better) Translates to: PLGGTLGIRRETMEAEDLTETSR*RWGSTS Trigger: AGACGTTGAACCCCATCTTCAACGAGACGTTTCAGT...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAACCACCTGGCCAATaGGATCATGCCGCGAGAAGC	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTAKPPGQ*DHAARS Trigger: GCTTCTCGCGGCATGATCTCATTGGCCAGGTGGTTT...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACATCCTCCACTAGCTGGTaGCAGTGTTCCACAGGCTTG	+
Preference number: 4 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTSSTSW*QCSTGL Trigger: CAAGCCTGTGGAACACTGGCACCAGCTAGTGGAGGA...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTACTGAAACGTCTCGTTaGAGATGGGGTTCAACGTCT	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSTETSR*RWGSTS Trigger: AGACGTTGAACCCCATCTTCAACGAGACGTTTCAGT...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAGGGGCACCGAGAACTaGAACGTCTCGTTGAAGATG	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTARGTEN*NVSLKM Trigger: CATCTTCAACGAGACGTTTCAGTTCTCGGTGCCCCT...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAGCAGAGAGAGAAGTTaGGCTCTCCGAGATCTGCCT	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTASRERS*ALRDLP Trigger: AGGCAGATCTCGGAGAGCTCAACTTCTCTCTCTGCT...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCACCAGTGAGGTCCATTaGTTTGAGGTTAGAGGCTTT	+
Preference number: 4 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPTSEVH*FEVRGF Trigger: AAAGCCTCTAACCTCAAAGCAATGGACCTCACTGGT...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGAGGGGCACCGAGAACTaGAACGTCTCGTTGAAGATG	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKRGTEN*NVSLKM Trigger: CATCTTCAACGAGACGTTTCAGTTCTCGGTGCCCCT...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCACTTCACATAGGGGTCTaGGAAACCAGTGAGGTCCAT	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTALHIGV*ETSEVH Trigger: ATGGACCTCACTGGTTTCTCAGACCCCTATGTGAAG...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGTCTGGAACTTCTTTTTaGGATCAGGCAACAGGTAGA	+
Preference number: 4 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSSGTSF*DQATGR Trigger: TCTACCTGTTGCCTGATCGCAAAAAGAAGTTCCAGA...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAGTCATAGTCTACCACTaGGATGCTGAGACCCACGTT	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTAVIVYH*DAETHV Trigger: AACGTGGGTCTCAGCATCGCAGTGGTAGACTATGAC...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGAGCTCAGGGGATGTCTaGCTTGGTTTGACTCCAGCA	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKSSGDV*LGLTPA Trigger: TGCTGGAGTCAAACCAAGCCAGACATCCCCTGAGCT...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	TTTCTGTCACTTCATCTAATTTCAGTTGGAAATCCTGTTGTGGTTTCCATCCGTGTGGTCAGGGTCTGCTaGGTGAGGGGCCGAGGCAGG	+
Preference number: 4 (lower is better) Translates to: FLSLHLISVGNPVVVSIRVVRVC*VRGRGR Trigger: CCTGCCTCGGCCCCTCACCCAGCAGACCCTGACCAC...ACGGATGGAAACCACAACAGGATTTCCAACTGAAATTAGATGAAGTGACAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR CCA 90 bp	TCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAGCCCTGGTACAGCTCTaGTTTGATCTGACCGATGAG	+
Preference number: 4 (lower is better) Translates to: STFTVRTQARTARLGQQQALVQL*FDLTDE Trigger: CTCATCGGTCAGATCAAACCAGAGCTGTACCAGGGC...TTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GAAGGGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTTCTTCCTGTGCACCTTaGTCTGGAACTTCTTTTTGC	+
Preference number: 4 (lower is better) Translates to: EGVDTGGCVCSGDIKDWSSSCAP*SGTSFC Trigger: GCAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGA...AGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGGGTCTGAGAACCCATTaGAGTCCTTTGCTGGGAGAT	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKGLRTH*SPLLGD Trigger: ATCTCCCAGCAAAGGACTCCAATGGGTTCTCAGACC...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GGGGACATCAAGGATTGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACTCTGGAACTTCTTTTTaGGATCAGGCAACAGGTAGA	+
Preference number: 4 (lower is better) Translates to: GDIKDWSVDIHSEDTGQNSGTSF*DQATGR Trigger: TCTACCTGTTGCCTGATCGCAAAAAGAAGTTCCAGA...GTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CCA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCATCTTCCTGTGCACCTTaGTCTGGAACTTCTTTTTGC	+
Preference number: 4 (lower is better) Translates to: VDIHSEDTGQNSKTWTTASSCAP*SGTSFC Trigger: GCAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGA...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR GCA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGACCAGTGAGGTCCATTaGTTTGAGGTTAGAGGCTTT	+
Preference number: 4 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKTSEVH*FEVRGF Trigger: AAAGCCTCTAACCTCAAAGCAATGGACCTCACTGGT...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR TCA 90 bp	TTTCTGTCACTTCATCTAATTTCAGTTGGAAATCCTGTTGTGGTTTCCATCCGTCGAAGTCATAGACGCTaGAGTGCAGCTTGCGCTGTG	+
Preference number: 4 (lower is better) Translates to: FLSLHLISVGNPVVVSIRRSHRR*SAACAV Trigger: CACAGCGCAAGCTGCACTTCAGCGTCTATGACTTCG...ACGGATGGAAACCACAACAGGATTTCCAACTGAAATTAGATGAAGTGACAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS CCA 90 bp	GCCCATGATGGTGTGGGCCACCCAGCAGGGGATGACCACCGAGGCTaGCTCCTAGGTGGTGCCCACCACCTCCTACCAGGCCTGCCAGCC	+
Preference number: 5 (lower is better) Translates to: AHDGVGHPAGDDHRG*LLGGAHHLLPGLPA Trigger: GGCTGGCAGGCCTGGTAGGAGGTGGTGGGCACCACCTAGGAGCCAGCCTCGGTGGTCATCCCCTGCTGGGTGGCCCACACCATCATGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	GGTAAGGGCAGTGCAGGCGGTCGCTCCTCAGTGCTTGGGTCTGCTTaGGTGGTCAGGGTCTGCTGGGTGAGGGGCCGAGGCAGGGCTGGG	+
Preference number: 5 (lower is better) Translates to: GKGSAGGRSSVLGSA*VVRVCWVRGRGRAG Trigger: CCCAGCCCTGCCTCGGCCCCTCACCCAGCAGACCCTGACCACCCAAGCAGACCCAAGCACTGAGGAGCGACCGCCTGCACTGCCCTTACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAACGCTGAAGTGCAGCTaGCGCTGTGCCAGCTCGGCC	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPATLKCS*RCASSA Trigger: GGCCGAGCTGGCACAGCGCAAGCTGCACTTCAGCGT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	CTTGCGCGGGTTAGCCAGCATCTCTGCCCAGTGTTCTCTGCCGTGTaGGTCGGCAGCCTCTGGACCCACGCGGCACACCCCGATCACTTC	+
Preference number: 5 (lower is better) Translates to: LARVSQHLCPVFSAV*VGSLWTHAAHPDHF Trigger: GAAGTGATCGGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCACACGGCAGAGAACACTGGGCAGAGATGCTGGCTAACCCGCGCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAACTGCTGAGCCTCCTTaGTCCCTCCAGGGCACCCAG	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPATAEPP*SLQGTQ Trigger: CTGGGTGCCCTGGAGGGACAAAGGAGGCTCAGCAGT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	CGGCTCAGAGCCCCCAAGACCACCTGGTTCCAGCAGCTCCGCAAATaGTGGATGGTGGGCTGTGTGCCCATGATGGTGTGGGCCACCCAG	+
Preference number: 5 (lower is better) Translates to: RLRAPKTTWFQQLRK*WMVGCVPMMVWATQ Trigger: CTGGGTGGCCCACACCATCATGGGCACACAGCCCACCATCCACCATTTGCGGAGCTGCTGGAACCAGGTGGTCTTGGGGGCTCTGAGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGCCAGCTCCAGCAGGTaGTCCAAAACCACCTGGCCA	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAASSSR*SKTTWP Trigger: TGGCCAGGTGGTTTTGGACAACCTGCTGGAGCTGGC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	CTCAGAGCCCCCAAGACCACCTGGTTCCAGCAGCTCCGCAAATGGTaGATGGTGGGCTGTGTGCCCATGATGGTGTGGGCCACCCAGCAG	+
Preference number: 5 (lower is better) Translates to: LRAPKTTWFQQLRKW*MVGCVPMMVWATQQ Trigger: CTGCTGGGTGGCCCACACCATCATGGGCACACAGCCCACCATCCACCATTTGCGGAGCTGCTGGAACCAGGTGGTCTTGGGGGCTCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	GTCCAGGTAGGAAGGTTCTGGCGGCTCAGAGCCCCCAAGACCACCTaGTTCCAGCAGCTCCGCAAATGGTGGATGGTGGGCTGTGTGCCC	+
Preference number: 5 (lower is better) Translates to: VQVGRFWRLRAPKTT*FQQLRKWWMVGCVP Trigger: GGGCACACAGCCCACCATCCACCATTTGCGGAGCTGCTGGAACCAGGTGGTCTTGGGGGCTCTGAGCCGCCAGAACCTTCCTACCTGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	CAGCATCTCTGCCCAGTGTTCTCTGCCGTGTGGGTCGGCAGCCTCTaGACCCACGCGGCACACCCCGATCACTTCATTGTGGCCGATGCA	+
Preference number: 5 (lower is better) Translates to: QHLCPVFSAVWVGSL*THAAHPDHFIVADA Trigger: TGCATCGGCCACAATGAAGTGATCGGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCACACGGCAGAGAACACTGGGCAGAGATGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAACCCATTGGAGTCCTTaGCTGGGAGATCCAGGGCCT	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPATHWSP*LGDPGP Trigger: AGGCCCTGGATCTCCCAGCAAAGGACTCCAATGGGT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAAACACCAGGGCCTCGTaGTACGTGGGGTTCAGTGTG	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPANTRAS*YVGFSV Trigger: CACACTGAACCCCACGTACAACGAGGCCCTGGTGTT...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CCTCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCACGCTGAAGTGCAGCTaGCGCTGTGCCAGCTCGGCC	+
Preference number: 5 (lower is better) Translates to: PLGGTLGIRRETMEAEDLTLKCS*RCASSA Trigger: GGCCGAGCTGGCACAGCGCAAGCTGCACTTCAGCGT...GAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS TCA 90 bp	CGCCGACCACCGGGTCCAGTGCCCTGGTACAGCTCTGGTTTGATCTaGCCGATGAGCTTGGCTTTTTCCTCTCCACCCGGCAGAGGTAAG	+
Preference number: 5 (lower is better) Translates to: RRPPGPVPWYSSGLI*PMSLAFSSPPGRGK Trigger: CTTACCTCTGCCGGGTGGAGAGGAAAAAGCCAAGCTCATCGGTCAGATCAAACCAGAGCTGTACCAGGGCACTGGACCCGGTGGTCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGACTGCTGAGCCTCCTTaGTCCCTCCAGGGCACCCAG	+
Preference number: 5 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSTAEPP*SLQGTQ Trigger: CTGGGTGCCCTGGAGGGACAAAGGAGGCTCAGCAGT...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	TCTAGGGGGAACTCTGGGGATAAGAAGAGAGACAATGGAGGCCGAGGACCTCCCACTGCTGAGCCTCCTTaGTCCCTCCAGGGCACCCAG	+
Preference number: 5 (lower is better) Translates to: SRGNSGDKKRDNGGRGPPTAEPP*SLQGTQ Trigger: CTGGGTGCCCTGGAGGGACAAAGGAGGCTCAGCAGT...GGGAGGTCCTCGGCCTCCATTGTCTCTCTTCTTATCCCCAGAGTTCCCCCTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	AGTGGCCTAGTCACACACACTCTCAGGATCCAGCACACCTCCTGGCCCCAGGGAAACACCAGGGCCTCGTaGTACGTGGGGTTCAGTGTG	+
Preference number: 5 (lower is better) Translates to: SGLVTHTLRIQHTSWPQGNTRAS*YVGFSV Trigger: CACACTGAACCCCACGTACAACGAGGCCCTGGTGTT...TCCCTGGGGCCAGGAGGTGTGCTGGATCCTGAGAGTGTGTGTGACTAGGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS TCA 90 bp	TTTGACTCCAGCAGCTACCACAGAGGCCACAGCAGCCTCTGGATATaGGTCCATGTCCAGGTAGGAAGGTTCTGGCGGCTCAGAGCCCCC	+
Preference number: 5 (lower is better) Translates to: FDSSSYHRGHSSLWI*VHVQVGRFWRLRAP Trigger: GGGGGCTCTGAGCCGCCAGAACCTTCCTACCTGGACATGGACTCATATCCAGAGGCTGCTGTGGCCTCTGTGGTAGCTGCTGGAGTCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS GCA 90 bp	CACCCCGATCACTTCATTGTGGCCGATGCAGTCATAGTCTACCACTaGGATGCTGAGACCCACGTTCTCCACGCTCTCGGGAGCCACGTC	+
Preference number: 5 (lower is better) Translates to: HPDHFIVADAVIVYH*DAETHVLHALGSHV Trigger: GACGTGGCTCCCGAGAGCGTGGAGAACGTGGGTCTCAGCATCGCAGTGGTAGACTATGACTGCATCGGCCACAATGAAGTGATCGGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 90 bp	AGAACCTGTTCCACCCTCAGAAGGCAGCTCAGGGGATGTCTGGCTTaGTTTGACTCCAGCAGCTACCACAGAGGCCACAGCAGCCTCTGG	+
Preference number: 5 (lower is better) Translates to: RTCSTLRRQLRGCLA*FDSSSYHRGHSSLW Trigger: CCAGAGGCTGCTGTGGCCTCTGTGGTAGCTGCTGGAGTCAAACCAAGCCAGACATCCCCTGAGCTGCCTTCTGAGGGTGGAACAGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCACCAGGGGCTAAGTCTTaGCGCAGGGGGCCACCACCC	+
Preference number: 5 (lower is better) Translates to: VDIHSEDTGQNSKTWTTAPGAKS*RRGPPP Trigger: GGGTGGTGGCCCCCTGCGCAAAGACTTAGCCCCTGG...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACACCAGGGGCTAAGTCTTaGCGCAGGGGGCCACCACCC	+
Preference number: 5 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTPGAKS*RRGPPP Trigger: GGGTGGTGGCCCCCTGCGCAAAGACTTAGCCCCTGG...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTCTTCCTGTGCACCTaGGTCTGGAACTTCTTTTTG	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVFLCT*VWNFFL Trigger: CAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	CACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGTGTGTTTAGCCAGCTCCAGCAGGTaGTCCAAAACCACCTGGCCA	+
Preference number: 5 (lower is better) Translates to: HTSWPQGDRWDETHRVCLASSSR*SKTTWP Trigger: TGGCCAGGTGGTTTTGGACAACCTGCTGGAGCTGGC...TAAACACACTCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR CAA 90 bp	CCTCCTAGCCTCACACCTCCAGGAGAAGGAGGGGTAGGTCCAGGCAGCCCCGCAGTGAGGTCCATTGCTTaGAGGTTAGAGGCTTTGATG	+
Preference number: 5 (lower is better) Translates to: PPSLTPPGEGGVGPGSPAVRSIA*RLEALM Trigger: CATCAAAGCCTCTAACCTCAAAGCAATGGACCTCAC...TGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAACGCTGAAGTGCAGCTaGCGCTGTGCCAGCTCGGCC	+
Preference number: 5 (lower is better) Translates to: VDIHSEDTGQNSKTWTTATLKCS*RCASSA Trigger: GGCCGAGCTGGCACAGCGCAAGCTGCACTTCAGCGT...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS TCA 90 bp	GAGGGAGACACCCAAGAGGACGATGCCACAGAATGTCACGATGACTaGCAGCAGGCTCACGGAAATATCTGCATCCGGACCCCGGGGATA	+
Preference number: 5 (lower is better) Translates to: EGDTQEDDATECHDD*QQAHGNICIRTPGI Trigger: TATCCCCGGGGTCCGGATGCAGATATTTCCGTGAGCCTGCTGTCAGTCATCGTGACATTCTGTGGCATCGTCCTCTTGGGTGTCTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 90 bp	TCACTTCATTGTGGCCGATGCAGTCATAGTCTACCACTGCGATGCTaGGACCCACGTTCTCCACGCTCTCGGGAGCCACGTCGAACACCA	+
Preference number: 5 (lower is better) Translates to: SLHCGRCSHSLPLRC*DPRSPRSREPRRTP Trigger: TGGTGTTCGACGTGGCTCCCGAGAGCGTGGAGAACGTGGGTCTCAGCATCGCAGTGGTAGACTATGACTGCATCGGCCACAATGAAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS-3UTR CAA 90 bp	GGGGACATCAAGGATTGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACGCCAGCTCCAGCAGGTaGTCCAAAACCACCTGGCCA	+
Preference number: 5 (lower is better) Translates to: GDIKDWSVDIHSEDTGQNASSSR*SKTTWP Trigger: TGGCCAGGTGGTTTTGGACAACCTGCTGGAGCTGGC...GTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCAATCCTTGATGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS TCA 90 bp	ACACCTATCATTGGTATCAGCATCTCGGACCCGTGCACAGAGGTCTaGGACCAGGATGAGCGCCCGCCGACAGAGGTCATCTTCATAGTC	+
Preference number: 5 (lower is better) Translates to: TPIIGISISDPCTEV*DQDERPPTEVIFIV Trigger: GACTATGAAGATGACCTCTGTCGGCGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGGGTCCGAGATGCTGATACCAATGATAGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130844.3
CDS TCA 90 bp	TCCGGACCCCGGGGATATCCTCTGATCCGCAGTTCGTTGAACTCTTaGCACCTATCATTGGTATCAGCATCTCGGACCCGTGCACAGAGG	+
Preference number: 5 (lower is better) Translates to: SGPRGYPLIRSSLNS*HLSLVSASRTRAQR Trigger: CCTCTGTGCACGGGTCCGAGATGCTGATACCAATGATAGGTGTCAAGAGTTCAACGAACTGCGGATCAGAGGATATCCCCGGGGTCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130844.3
CDS-3UTR CAA 90 bp	AGGATCCAGCACACCTCCTGGCCCCAGGGAGACAGGTGGGATGAGACTCACAGAGTCTTCCTGTGCACCTaGGTCTGGAACTTCTTTTTG	+
Preference number: 5 (lower is better) Translates to: RIQHTSWPQGDRWDETHRVFLCT*VWNFFL Trigger: CAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGAC...TCTGTGAGTCTCATCCCACCTGTCTCCCTGGGGCCAGGAGGTGTGCTGGATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118831.8
CDS-3UTR CAA 90 bp	GTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAACCCATTGGAGTCCTTaGCTGGGAGATCCAGGGCCT	+
Preference number: 5 (lower is better) Translates to: VDIHSEDTGQNSKTWTTATHWSP*LGDPGP Trigger: AGGCCCTGGATCTCCCAGCAAAGGACTCCAATGGGT...TGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	TGGTCTGTCGACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACCCATTGGAGTCCTTaGCTGGGAGATCCAGGGCCT	+
Preference number: 5 (lower is better) Translates to: WSVDIHSEDTGQNSKTWTTHWSP*LGDPGP Trigger: AGGCCCTGGATCTCCCAGCAAAGGACTCCAATGGGT...TGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTCGACAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	GGGTGGACACTGGAGGGTGTGTCTGTTCAGGGGACATCAAGGATTGGTCTGTCGGTCTTCCTGTGCACCTaGGTCTGGAACTTCTTTTTG	+
Preference number: 5 (lower is better) Translates to: GWTLEGVSVQGTSRIGLSVFLCT*VWNFFL Trigger: CAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGAC...CGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS-3UTR CAA 90 bp	GACATTCACAGTGAGGACACAGGCCAGAACAGCAAGACTTGGACAACAGCAAAGGTGAGGTCCATTGCTTaGAGGTTAGAGGCTTTGATG	+
Preference number: 5 (lower is better) Translates to: DIHSEDTGQNSKTWTTAKVRSIA*RLEALM Trigger: CATCAAAGCCTCTAACCTCAAAGCAATGGACCTCAC...CTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTGTGAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8
CDS CCA 72 bp	GGTGTGGGCCACCCAGCAGGGGATGACCACCGAGGCTaGCTCCTAGGTGGTGCCCACCACCTCCTACCAGGC	+
Preference number: 6 (lower is better) Translates to: GVGHPAGDDHRG*LLGGAHHLLPG Trigger: GCCTGGTAGGAGGTGGTGGGCACCACCTAGGAGCCAGCCTCGGTGGTCATCCCCTGCTGGGTGGCCCACACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	AGTGCAGGCGGTCGCTCCTCAGTGCTTGGGTCTGCTTaGGTGGTCAGGGTCTGCTGGGTGAGGGGCCGAGGC	+
Preference number: 6 (lower is better) Translates to: SAGGRSSVLGSA*VVRVCWVRGRG Trigger: GCCTCGGCCCCTCACCCAGCAGACCCTGACCACCCAAGCAGACCCAAGCACTGAGGAGCGACCGCCTGCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 72 bp	CAGTGCAGGCGGTCGCTCCTCAGTGCTTGGGTCTGCTaGGGTGGTCAGGGTCTGCTGGGTGAGGGGCCGAGG	+
Preference number: 6 (lower is better) Translates to: QCRRSLLSAWVC*GGQGLLGEGPR Trigger: CCTCGGCCCCTCACCCAGCAGACCCTGACCACCCAAGCAGACCCAAGCACTGAGGAGCGACCGCCTGCACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	GTTAGCCAGCATCTCTGCCCAGTGTTCTCTGCCGTGTaGGTCGGCAGCCTCTGGACCCACGCGGCACACCCC	+
Preference number: 6 (lower is better) Translates to: VSQHLCPVFSAV*VGSLWTHAAHP Trigger: GGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCACACGGCAGAGAACACTGGGCAGAGATGCTGGCTAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS GCA 72 bp	GCAGAGGTAAGGGCAGTGCAGGCGGTCGCTCCTCAGTaGTTGGGTCTGCTTGGGTGGTCAGGGTCTGCTGGG	+
Preference number: 6 (lower is better) Translates to: AEVRAVQAVAPQ*LGLLGWSGSAG Trigger: CCCAGCAGACCCTGACCACCCAAGCAGACCCAAGCACTGAGGAGCGACCGCCTGCACTGCCCTTACCTCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	AAATGGTGGATGGTGGGCTGTGTGCCCATGATGGTGTaGGCCACCCAGCAGGGGATGACCACCGAGGCTGGC	+
Preference number: 6 (lower is better) Translates to: KWWMVGCVPMMV*ATQQGMTTEAG Trigger: GCCAGCCTCGGTGGTCATCCCCTGCTGGGTGGCCCACACCATCATGGGCACACAGCCCACCATCCACCATTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	TGCCCAGTGTTCTCTGCCGTGTGGGTCGGCAGCCTCTaGACCCACGCGGCACACCCCGATCACTTCATTGTG	+
Preference number: 6 (lower is better) Translates to: CPVFSAVWVGSL*THAAHPDHFIV Trigger: CACAATGAAGTGATCGGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCACACGGCAGAGAACACTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 90 bp	CTCCAGAGCGGGCGGTCAGGGGGCTGTTCAGCCAGCTCCAGCAGGTaGTCCAAAACCACCTGGCCAATGAGATCATGCCGCGAGAAGCGG	+
Preference number: 6 (lower is better) Translates to: LQSGRSGGCSASSSR*SKTTWPMRSCREKR Trigger: CCGCTTCTCGCGGCATGATCTCATTGGCCAGGTGGTTTTGGACAACCTGCTGGAGCTGGCTGAACAGCCCCCTGACCGCCCGCTCTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	CCCAAGACCACCTGGTTCCAGCAGCTCCGCAAATGGTaGATGGTGGGCTGTGTGCCCATGATGGTGTGGGCC	+
Preference number: 6 (lower is better) Translates to: PKTTWFQQLRKW*MVGCVPMMVWA Trigger: GGCCCACACCATCATGGGCACACAGCCCACCATCCACCATTTGCGGAGCTGCTGGAACCAGGTGGTCTTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	GCCCCCAAGACCACCTGGTTCCAGCAGCTCCGCAAATaGTGGATGGTGGGCTGTGTGCCCATGATGGTGTGG	+
Preference number: 6 (lower is better) Translates to: APKTTWFQQLRK*WMVGCVPMMVW Trigger: CCACACCATCATGGGCACACAGCCCACCATCCACCATTTGCGGAGCTGCTGGAACCAGGTGGTCTTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 72 bp	GGGCGGTCAGGGGGCTGTTCAGCCAGCTCCAGCAGGTaGTCCAAAACCACCTGGCCAATGAGATCATGCCGC	+
Preference number: 6 (lower is better) Translates to: GRSGGCSASSSR*SKTTWPMRSCR Trigger: GCGGCATGATCTCATTGGCCAGGTGGTTTTGGACAACCTGCTGGAGCTGGCTGAACAGCCCCCTGACCGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 72 bp	CATCTCGGACCCGTGCACAGAGGTCTGAGACCAGGATaGGCGCCCGCCGACAGAGGTCATCTTCATAGTCCC	+
Preference number: 6 (lower is better) Translates to: HLGPVHRGLRPG*APADRGHLHSP Trigger: GGGACTATGAAGATGACCTCTGTCGGCGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGGGTCCGAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130707.8 ENSMUST00000130844.3
CDS TCA 72 bp	GCAGGGCTGGGTACCTTGTGGTGGGTGCTAGACTTGTaGCCTGCTGATGAGACTGGGCACTGGGTAAGCCCC	+
Preference number: 6 (lower is better) Translates to: AGLGTLWWVLDL*PADETGHWVSP Trigger: GGGGCTTACCCAGTGCCCAGTCTCATCAGCAGGTCACAAGTCTAGCACCCACCACAAGGTACCCAGCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 72 bp	ATTGGTATCAGCATCTCGGACCCGTGCACAGAGGTCTaGGACCAGGATGAGCGCCCGCCGACAGAGGTCATC	+
Preference number: 6 (lower is better) Translates to: IGISISDPCTEV*DQDERPPTEVI Trigger: GATGACCTCTGTCGGCGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGGGTCCGAGATGCTGATACCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130844.3
CDS TCA 72 bp	CCGGGTCCAGTGCCCTGGTACAGCTCTGGTTTGATCTaGCCGATGAGCTTGGCTTTTTCCTCTCCACCCGGC	+
Preference number: 6 (lower is better) Translates to: PGPVPWYSSGLI*PMSLAFSSPPG Trigger: GCCGGGTGGAGAGGAAAAAGCCAAGCTCATCGGTCAGATCAAACCAGAGCTGTACCAGGGCACTGGACCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 72 bp	TGTGGCCGATGCAGTCATAGTCTACCACTGCGATGCTaGGACCCACGTTCTCCACGCTCTCGGGAGCCACGT	+
Preference number: 6 (lower is better) Translates to: CGRCSHSLPLRC*DPRSPRSREPR Trigger: ACGTGGCTCCCGAGAGCGTGGAGAACGTGGGTCTCAGCATCGCAGTGGTAGACTATGACTGCATCGGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 90 bp	CCTGTTCCACCCTCAGAAGGCAGCTCAGGGGATGTCTGGCTTGGTTaGACTCCAGCAGCTACCACAGAGGCCACAGCAGCCTCTGGATAT	+
Preference number: 6 (lower is better) Translates to: PVPPSEGSSGDVWLG*TPAATTEATAASGY Trigger: ATATCCAGAGGCTGCTGTGGCCTCTGTGGTAGCTGCTGGAGTCAAACCAAGCCAGACATCCCCTGAGCTGCCTTCTGAGGGTGGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 72 bp	AGCAGCTACCACAGAGGCCACAGCAGCCTCTGGATATaGGTCCATGTCCAGGTAGGAAGGTTCTGGCGGCTC	+
Preference number: 6 (lower is better) Translates to: SSYHRGHSSLWI*VHVQVGRFWRL Trigger: GAGCCGCCAGAACCTTCCTACCTGGACATGGACTCATATCCAGAGGCTGCTGTGGCCTCTGTGGTAGCTGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 72 bp	GCTCGGCCAGGGGCACCGAGAACTGAAACGTCTCGTTaGAGATGGGGTTCAACGTCTTCCTGTGCACCTTGG	+
Preference number: 6 (lower is better) Translates to: ARPGAPRTETSR*RWGSTSSCAPW Trigger: CCAAGGTGCACAGGAAGACGTTGAACCCCATCTTCAACGAGACGTTTCAGTTCTCGGTGCCCCTGGCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS TCA 72 bp	TTGCGCTGTGCCAGCTCGGCCAGGGGCACCGAGAACTaGAACGTCTCGTTGAAGATGGGGTTCAACGTCTTC	+
Preference number: 6 (lower is better) Translates to: LRCASSARGTEN*NVSLKMGFNVF Trigger: GAAGACGTTGAACCCCATCTTCAACGAGACGTTTCAGTTCTCGGTGCCCCTGGCCGAGCTGGCACAGCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CCA 72 bp	TCGCCGACCACCGGGTCCAGTGCCCTGGTACAGCTCTaGTTTGATCTGACCGATGAGCTTGGCTTTTTCCTC	+
Preference number: 6 (lower is better) Translates to: SPTTGSSALVQL*FDLTDELGFFL Trigger: GAGGAAAAAGCCAAGCTCATCGGTCAGATCAAACCAGAGCTGTACCAGGGCACTGGACCCGGTGGTCGGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS GCA 72 bp	CACTTCATTGTGGCCGATGCAGTCATAGTCTACCACTaGGATGCTGAGACCCACGTTCTCCACGCTCTCGGG	+
Preference number: 6 (lower is better) Translates to: HFIVADAVIVYH*DAETHVLHALG Trigger: CCCGAGAGCGTGGAGAACGTGGGTCTCAGCATCGCAGTGGTAGACTATGACTGCATCGGCCACAATGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 90 bp	ATCCGGACCCCGGGGATATCCTCTGATCCGCAGTTCGTTGAACTCTaGACACCTATCATTGGTATCAGCATCTCGGACCCGTGCACAGAG	+
Preference number: 6 (lower is better) Translates to: IRTPGISSDPQFVEL*TPIIGISISDPCTE Trigger: CTCTGTGCACGGGTCCGAGATGCTGATACCAATGATAGGTGTCAAGAGTTCAACGAACTGCGGATCAGAGGATATCCCCGGGGTCCGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130844.3
CDS TCA 72 bp	ACCCAAGAGGACGATGCCACAGAATGTCACGATGACTaGCAGCAGGCTCACGGAAATATCTGCATCCGGACC	+
Preference number: 6 (lower is better) Translates to: TQEDDATECHDD*QQAHGNICIRT Trigger: GGTCCGGATGCAGATATTTCCGTGAGCCTGCTGTCAGTCATCGTGACATTCTGTGGCATCGTCCTCTTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 72 bp	CCGGGGATATCCTCTGATCCGCAGTTCGTTGAACTCTaGACACCTATCATTGGTATCAGCATCTCGGACCCG	+
Preference number: 6 (lower is better) Translates to: PGISSDPQFVEL*TPIIGISISDP Trigger: CGGGTCCGAGATGCTGATACCAATGATAGGTGTCAAGAGTTCAACGAACTGCGGATCAGAGGATATCCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130844.3
CDS TCA 72 bp	CGGGGATATCCTCTGATCCGCAGTTCGTTGAACTCTTaGCACCTATCATTGGTATCAGCATCTCGGACCCGT	+
Preference number: 6 (lower is better) Translates to: RGYPLIRSSLNS*HLSLVSASRTR Trigger: ACGGGTCCGAGATGCTGATACCAATGATAGGTGTCAAGAGTTCAACGAACTGCGGATCAGAGGATATCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2 ENSMUST00000130844.3
CDS GCA 72 bp	AACGTCTCGTTGAAGATGGGGTTCAACGTCTTCCTGTaGACCTTGGTCTGGAACTTCTTTTTGCGATCAGGC	+
Preference number: 6 (lower is better) Translates to: NVSLKMGFNVFL*TLVWNFFLRSG Trigger: GCCTGATCGCAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGACGTTGAACCCCATCTTCAACGAGACGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2
CDS CAA 72 bp	TCGTTGAAGATGGGGTTCAACGTCTTCCTGTGCACCTaGGTCTGGAACTTCTTTTTGCGATCAGGCAACAGG	+
Preference number: 6 (lower is better) Translates to: SLKMGFNVFLCT*VWNFFLRSGNR Trigger: CCTGTTGCCTGATCGCAAAAAGAAGTTCCAGACCAAGGTGCACAGGAAGACGTTGAACCCCATCTTCAACGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118831.8 ENSMUST00000118962.8 ENSMUST00000120262.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu