RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044912

Ensembl transcript IDs: ENSMUST00000110451.4, ENSMUST00000221220.2, ENSMUST00000238790.2

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGCCCCGACTCACAAAAGCTGTCTCCGTCTCCAGGACGCCATCTaGACAAGGACGACCGAGGCTTCGGACCATGCCCATCTCCGGACG +
Preference number: 1 (lower is better)
Translates to: KAPTHKSCLRLQDAI*TRTTEASDHAHLRT
Trigger: CGTCCGGAGATGGGCATGGTCCGAAGCCTCGGTCGTCCTTGTGCAGATGGCGTCCTGGAGACGGAGACAGCTTTTGTGAGTCGGGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp TCGTCAGAGGGGAGCAGCGAGTACAACAGCCACCACCACAACTGGTaGAACCAATTCATCCCCGAAAGAAGGCCCACGATGAGACGCGTC +
Preference number: 1 (lower is better)
Translates to: SSEGSSEYNSHHHNW*NQFIPERRPTMRRV
Trigger: GACGCGTCTCATCGTGGGCCTTCTTTCGGGGATGAATTGGTTTCACCAGTTGTGGTGGTGGCTGTTGTACTCGCTGCTCCCCTCTGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp TGGTGCCATCCTGCTCCTCTGGACTCCACAGAGAGGAACTGTGGGTaGCATAGGAATCTTCAAAGCCCCGACTCACAAAAGCTGTCTCCG +
Preference number: 1 (lower is better)
Translates to: WCHPAPLDSTERNCG*HRNLQSPDSQKLSP
Trigger: CGGAGACAGCTTTTGTGAGTCGGGGCTTTGAAGATTCCTATGCCACCCACAGTTCCTCTCTGTGGAGTCCAGAGGAGCAGGATGGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 90 bp GGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTGCAAGTaGCTGAGACAGAACAGCTTCTCCCCCATCATTCTCTCCCGGGTC +
Preference number: 1 (lower is better)
Translates to: GSRTRVTFISPSGCK*LRQNSFSPIILSRV
Trigger: GACCCGGGAGAGAATGATGGGGGAGAAGCTGTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp GTCACAGGAGATCCTGTCTCAAAACCACCACCACCGCATAGAAGATaGTTGGCCCATGCTACCCAGTGGCACCTGAGGTGCCTGAGTCAT +
Preference number: 1 (lower is better)
Translates to: VTGDPVSKPPPPHRR*LAHATQWHLRCLSH
Trigger: ATGACTCAGGCACCTCAGGTGCCACTGGGTAGCATGGGCCAATCATCTTCTATGCGGTGGTGGTGGTTTTGAGACAGGATCTCCTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 90 bp AGGTCACCGCATTTTGAGATAGGCTCCAAAAGCCTGTGTGGTACCTaGAGACTGGTGCCATCCTGCTCCTCTGGACTCCACAGAGAGGAA +
Preference number: 1 (lower is better)
Translates to: RSPHFEIGSKSLCGT*RLVPSCSSGLHREE
Trigger: TTCCTCTCTGTGGAGTCCAGAGGAGCAGGATGGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAGCCTATCTCAAAATGCGGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 90 bp AATGCTGCTATTATGCCAGCAGCAGAAAGGGAAGCACAACGAGGCTaGTCGGCTTCCCCTTCAGCACAAGGCACACAGAGAGGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: NAAIMPAAEREAQRG*SASPSAQGTQRGKD
Trigger: ATCCTTCCCTCTCTGTGTGCCTTGTGCTGAAGGGGAAGCCGAGCAGCCTCGTTGTGCTTCCCTTTCTGCTGCTGGCATAATAGCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp GCACTCAGTTCTATCCCCGTGACACAGTCGCACTGCAAAGACCACTaGGCAGTTAGTGGGCAAGATGCTGAGAAGACACTCCGAGGTCTT +
Preference number: 1 (lower is better)
Translates to: ALSSIPVTQSHCKDH*AVSGQDAEKTLRGL
Trigger: AAGACCTCGGAGTGTCTTCTCAGCATCTTGCCCACTAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGGGATAGAACTGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp GGGGCTTGCCGTTTGGACGGAGTCCTGCAGATCACTATTAGAGAGTaGGAAATGGTCCTCTTCAAGAAACAGGGAGCTTGCCTCCTCTGG +
Preference number: 1 (lower is better)
Translates to: GACRLDGVLQITIRE*EMVLFKKQGACLLW
Trigger: CCAGAGGAGGCAAGCTCCCTGTTTCTTGAAGAGGACCATTTCTCACTCTCTAATAGTGATCTGCAGGACTCCGTCCAAACGGCAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp CCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTGCAAGTGGCTaGGACAGAACAGCTTCTCCCCCATCATTCTCTCCCGGGTCATCT +
Preference number: 1 (lower is better)
Translates to: PEPESLSFPLLGASG*DRTASPPSFSPGSS
Trigger: AGATGACCCGGGAGAGAATGATGGGGGAGAAGCTGTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp ACTGCGTGGATGAAGCACTGTCACTGTGAGACACCACAGATGGGCTaGGCGGAGACTCTCCACTGCTCAGATTACTTCTTGGCTCCAGAA +
Preference number: 1 (lower is better)
Translates to: TAWMKHCHCETPQMG*AETLHCSDYFLAPE
Trigger: TTCTGGAGCCAAGAAGTAATCTGAGCAGTGGAGAGTCTCCGCTCAGCCCATCTGTGGTGTCTCACAGTGACAGTGCTTCATCCACGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp GCTCGGCTTCCCCTTCAGCACAAGGCACACAGAGAGGGAAGGATGTaGAAGGCCAATTCTTCGCCGCTCCTCTATCAATTGCACTCAGTT +
Preference number: 1 (lower is better)
Translates to: ARLPLQHKAHREGRM*KANSSPLLYQLHSV
Trigger: AACTGAGTGCAATTGATAGAGGAGCGGCGAAGAATTGGCCTTTCACATCCTTCCCTCTCTGTGTGCCTTGTGCTGAAGGGGAAGCCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp AATTCTTCGCCGCTCCTCTATCAATTGCACTCAGTTCTATCCCCGTaGCACAGTCGCACTGCAAAGACCACTGGGCAGTTAGTGGGCAAG +
Preference number: 1 (lower is better)
Translates to: NSSPLLYQLHSVLSP*HSRTAKTTGQLVGK
Trigger: CTTGCCCACTAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGGGATAGAACTGAGTGCAATTGATAGAGGAGCGGCGAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 90 bp CTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTaGAAGTGGCTGAGACAGAACAGCTTCTCCCCCATCATTCTCTCC +
Preference number: 1 (lower is better)
Translates to: LLGSRTRVTFISPSG*KWLRQNSFSPIILS
Trigger: GGAGAGAATGATGGGGGAGAAGCTGTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 90 bp AGATCAGACAGTGTACAGTGTCCTCTCCAGTGGGGTTCTACTTTCTaGGTCATTGTGACCATAAGTCACTTCCCGGTCTTCCCACCTCCC +
Preference number: 1 (lower is better)
Translates to: RSDSVQCPLQWGSTF*VIVTISHFPVFPPP
Trigger: GGGAGGTGGGAAGACCGGGAAGTGACTTATGGTCACAATGACCCAGAAAGTAGAACCCCACTGGAGAGGACACTGTACACTGTCTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp TCTGTTTCTTGCTGGGCAGCAGCACTATGTGAACTTGCCAAGAGTTaGCACCACTTCGGTCCTTATCTGGGAGACCCTGTGCTCTCACAA +
Preference number: 1 (lower is better)
Translates to: SVSCWAAALCELAKS*HHFGPYLGDPVLSQ
Trigger: TTGTGAGAGCACAGGGTCTCCCAGATAAGGACCGAAGTGGTGTCAACTCTTGGCAAGTTCACATAGTGCTGCTGCCCAGCAAGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 90 bp CCTCTATCAATTGCACTCAGTTCTATCCCCGTGACACAGTCGCACTaGAAAGACCACTGGGCAGTTAGTGGGCAAGATGCTGAGAAGACA +
Preference number: 1 (lower is better)
Translates to: PLSIALSSIPVTQSH*KDHWAVSGQDAEKT
Trigger: TGTCTTCTCAGCATCTTGCCCACTAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGGGATAGAACTGAGTGCAATTGATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp GCTGGAAGAAGTTCTGGACATCCTGAGATGCCATGGTCAACACCATaGTCAAATACCTCGTGTCTGCAGAGTCCACTTGTTCCGTTCCTC +
Preference number: 1 (lower is better)
Translates to: AGRSSGHPEMPWSTP*SNTSCLQSPLVPFL
Trigger: GAGGAACGGAACAAGTGGACTCTGCAGACACGAGGTATTTGATCATGGTGTTGACCATGGCATCTCAGGATGTCCAGAACTTCTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 90 bp TTGCCAAGAGTTGACACCACTTCGGTCCTTATCTGGGAGACCCTGTaGTCTCACAATGGTCACAGTGAGCTTCTGGGTTACAGCTCTATA +
Preference number: 1 (lower is better)
Translates to: LPRVDTTSVLIWETL*SHNGHSELLGYSSI
Trigger: TATAGAGCTGTAACCCAGAAGCTCACTGTGACCATTGTGAGAGCACAGGGTCTCCCAGATAAGGACCGAAGTGGTGTCAACTCTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp GGTTACAGCTCTATATTCAAAGATGACATCGAGGTCACCGCATTTTaGGATAGGCTCCAAAAGCCTGTGTGGTACCTGCAGACTGGTGCC +
Preference number: 1 (lower is better)
Translates to: GYSSIFKDDIEVTAF*DRLQKPVWYLQTGA
Trigger: GGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAGCCTATCTCAAAATGCGGTGACCTCGATGTCATCTTTGAATATAGAGCTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp TCTTCAAAGATACTTCAGAGGCAGGCACTAATTCAGCTTTCCATTTaGGGACAGTGGGGTGTGGGCTGGGCAAGTCATTTTCTCATGGCC +
Preference number: 1 (lower is better)
Translates to: SSKILQRQALIQLSI*GQWGVGWASHFLMA
Trigger: GGCCATGAGAAAATGACTTGCCCAGCCCACACCCCACTGTCCTCAAATGGAAAGCTGAATTAGTGCCTGCCTCTGAAGTATCTTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 90 bp AGAAATGGTCCTCTTCAAGAAACAGGGAGCTTGCCTCCTCTGGACTaGCATCGTGGTCCTGTTCTTCATCTTCCAAGTAGGTTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: RNGPLQETGSLPPLD*HRGPVLHLPSRFAE
Trigger: TTCAGCAAACCTACTTGGAAGATGAAGAACAGGACCACGATGGCAGTCCAGAGGAGGCAAGCTCCCTGTTTCTTGAAGAGGACCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 90 bp CCTACGCTTACAATCTGTCAAAATGTAGAGCTGTGGGGGAAGTTCTaGGGCTTTGACTTCGTGTATCCGTCACTAGCTATCACTCTTCCC +
Preference number: 1 (lower is better)
Translates to: PTLTICQNVELWGKF*GFDFVYPSLAITLP
Trigger: GGGAAGAGTGATAGCTAGTGACGGATACACGAAGTCAAAGCCGCAGAACTTCCCCCACAGCTCTACATTTTGACAGATTGTAAGCGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp ATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTaGGTGCAAGTGGCTGAGACAGAACAGCTTCTCCCCCATCATTCT +
Preference number: 1 (lower is better)
Translates to: ITSWLQNQSHFHFPF*VQVAETEQLLPHHS
Trigger: AGAATGATGGGGGAGAAGCTGTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 90 bp CAAGTGTTGCAGCCTACGCTTACAATCTGTCAAAATGTAGAGCTGTaGGGGAAGTTCTGCGGCTTTGACTTCGTGTATCCGTCACTAGCT +
Preference number: 1 (lower is better)
Translates to: QVLQPTLTICQNVEL*GKFCGFDFVYPSLA
Trigger: AGCTAGTGACGGATACACGAAGTCAAAGCCGCAGAACTTCCCCCACAGCTCTACATTTTGACAGATTGTAAGCGTAGGCTGCAACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp CATCTTCATGTACCAAGTCCTCTGCATGGAAAGGACAGCCAGGTCTaGGTGGACACAAAGCACAGTGCTCACACTGAAAGATCAGTAGAT +
Preference number: 1 (lower is better)
Translates to: HLHVPSPLHGKDSQV*VDTKHSAHTERSVD
Trigger: ATCTACTGATCTTTCAGTGTGAGCACTGTGCTTTGTGTCCACCCAGACCTGGCTGTCCTTTCCATGCAGAGGACTTGGTACATGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp TTACAGATGAGTCTTTCCACATCTTCATGTACCAAGTCCTCTGCATaGAAAGGACAGCCAGGTCTGGGTGGACACAAAGCACAGTGCTCA +
Preference number: 1 (lower is better)
Translates to: LQMSLSTSSCTKSSA*KGQPGLGGHKAQCS
Trigger: TGAGCACTGTGCTTTGTGTCCACCCAGACCTGGCTGTCCTTTCCATGCAGAGGACTTGGTACATGAAGATGTGGAAAGACTCATCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp TACAATCTGTCAAAATGTAGAGCTGTGGGGGAAGTTCTGCGGCTTTaGCTTCGTGTATCCGTCACTAGCTATCACTCTTCCCGAAGACAG +
Preference number: 1 (lower is better)
Translates to: YNLSKCRAVGEVLRL*LRVSVTSYHSSRRQ
Trigger: CTGTCTTCGGGAAGAGTGATAGCTAGTGACGGATACACGAAGTCAAAGCCGCAGAACTTCCCCCACAGCTCTACATTTTGACAGATTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp TATAGGAAAAGCAGGGCTTCCTCTGTCCAACAGTTATGCGATCAGTaGAAACAGGATCCAAACCAACTGTGCGTCTCTCACAGGGAGCAA +
Preference number: 1 (lower is better)
Translates to: YRKSRASSVQQLCDQ*KQDPNQLCVSHREQ
Trigger: TTGCTCCCTGTGAGAGACGCACAGTTGGTTTGGATCCTGTTTTCACTGATCGCATAACTGTTGGACAGAGGAAGCCCTGCTTTTCCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp TCTGAACCCACCTACGTCCACACAGCATGTGCTCACTTCACTGTCTaGGGTCTGTTTTGTTCAACACCATTAAGTGAGATCCTATCTCCA +
Preference number: 1 (lower is better)
Translates to: SEPTYVHTACAHFTV*GLFCSTPLSEILSP
Trigger: TGGAGATAGGATCTCACTTAATGGTGTTGAACAAAACAGACCCCAGACAGTGAAGTGAGCACATGCTGTGTGGACGTAGGTGGGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp AATTGGGAGCCTGGAATTCAATGTAGCATGTTGACACCTTGGCAGTaGGTGGAAGAGCAGCCATCCGATCCCAGAATCACACAGTTTAAA +
Preference number: 1 (lower is better)
Translates to: NWEPGIQCSMLTPWQ*VEEQPSDPRITQFK
Trigger: TTTAAACTGTGTGATTCTGGGATCGGATGGCTGCTCTTCCACCCACTGCCAAGGTGTCAACATGCTACATTGAATTCCAGGCTCCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp GCAAACGTCATCCTAAGCTCACTATCCCAGCAGAAAACCCAAAACTaGGTGAGTCAAGGAGCAGAACATAAAGCAGAGGTGATTAGCAGG +
Preference number: 1 (lower is better)
Translates to: ANVILSSLSQQKTQN*VSQGAEHKAEVISR
Trigger: CCTGCTAATCACCTCTGCTTTATGTTCTGCTCCTTGACTCACTCAGTTTTGGGTTTTCTGCTGGGATAGTGAGCTTAGGATGACGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 90 bp CTGTCTTCCTGGTGGGTACACAGCAAACGTTTGCATTTTATTTTCTaGTCCAACTCTGTTGTCTTTCCCTTCTCAGATACTCCTGAACGA +
Preference number: 1 (lower is better)
Translates to: LSSWWVHSKRLHFIF*SNSVVFPFSDTPER
Trigger: TCGTTCAGGAGTATCTGAGAAGGGAAAGACAACAGAGTTGGAGCAGAAAATAAAATGCAAACGTTTGCTGTGTACCCACCAGGAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp AGAGTTTTCCTGTGCCCTTGTCTGGTCTTGTCAGGATATCCATTATaGAGTGCAAGGAATAAATACGTTCTTCAAGTGTTGCAGCCTACG +
Preference number: 1 (lower is better)
Translates to: RVFLCPCLVLSGYPL*SARNKYVLQVLQPT
Trigger: CGTAGGCTGCAACACTTGAAGAACGTATTTATTCCTTGCACTTCATAATGGATATCCTGACAAGACCAGACAAGGGCACAGGAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp TCCTATCTCCAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATaGGTCTTTCCACATCTTCATGTACCAAGTCCTCTGCATGGAAAG +
Preference number: 1 (lower is better)
Translates to: SYLQIVSMQPQVIYR*VFPHLHVPSPLHGK
Trigger: CTTTCCATGCAGAGGACTTGGTACATGAAGATGTGGAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTGGAGATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 90 bp TCATGCCTCTTTGCAAACACGGCCTGGATCTTTTCTGAGACCTCATaGTGTCAGAATGCTGAGTGTAGTACATTCATGGTCATTATAAAT +
Preference number: 1 (lower is better)
Translates to: SCLFANTAWIFSETS*CQNAECSTFMVIIN
Trigger: ATTTATAATGACCATGAATGTACTACACTCAGCATTCTGACAGCATGAGGTCTCAGAAAAGATCCAGGCCGTGTTTGCAAAGAGGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp AGATCTGATTCCTGTGATCTGGTAGAGTTTTCCTGTGCCCTTGTCTaGTCTTGTCAGGATATCCATTATGAAGTGCAAGGAATAAATACG +
Preference number: 1 (lower is better)
Translates to: RSDSCDLVEFSCALV*SCQDIHYEVQGINT
Trigger: CGTATTTATTCCTTGCACTTCATAATGGATATCCTGACAAGACCAGACAAGGGCACAGGAAAACTCTACCAGATCACAGGAATCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 90 bp CTTGAATTGCTTAGTCACATCTTCATCACTCTCAGAAGATGTGGATaGCTCTTCATCATCCCCAAAGCTGTTAACTTGCTTTCTTCCATT +
Preference number: 1 (lower is better)
Translates to: LELLSHIFITLRRCG*LFIIPKAVNLLSSI
Trigger: AATGGAAGAAAGCAAGTTAACAGCTTTGGGGATGATGAAGAGCCATCCACATCTTCTGAGAGTGATGAAGATGTGACTAAGCAATTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 90 bp CCCATGTCTAGACCCAGCCAGATTCCAGAACATTCTAAGCACCAATaGCTTTTATTCACTCTTTGGAGAGGTTATGTTTTGAATATTTCC +
Preference number: 1 (lower is better)
Translates to: PMSRPSQIPEHSKHQ*LLFTLWRGYVLNIS
Trigger: GGAAATATTCAAAACATAACCTCTCCAAAGAGTGAATAAAAGTCATTGGTGCTTAGAATGTTCTGGAATCTGGCTGGGTCTAGACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp AGCTCTCCCACCACAGAGCCAACTAATTATCTTTCAGAACTCTTTTaGGAAGCAAATGTAGCTGTAAACGCTCAAGTGAAAAACATGTTA +
Preference number: 1 (lower is better)
Translates to: SSPTTEPTNYLSELF*EANVAVNAQVKNML
Trigger: TAACATGTTTTTCACTTGAGCGTTTACAGCTACATTTGCTTCTCAAAAGAGTTCTGAAAGATAATTAGTTGGCTCTGTGGTGGGAGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp ATTATACATAAATCTGGTGATACCTCGGGGAAATCTGCCTTCTCATaGAGCTCAAAGTCGATTGGTGATACTGTCATACAGCAGTTAATA +
Preference number: 1 (lower is better)
Translates to: IIHKSGDTSGKSAFS*SSKSIGDTVIQQLI
Trigger: TATTAACTGCTGTATGACAGTATCACCAATCGACTTTGAGCTTCATGAGAAGGCAGATTTCCCCGAGGTATCACCAGATTTATGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 90 bp TTTGGAATTTTGAACACTGAGAAGAGTCTGATTCATACACCTCAGTaGTGGAAAACAGTAACGTTTATAGCTCCTTTGAAATCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: FGILNTEKSLIHTPQ*WKTVTFIAPLKSQA
Trigger: AGCCTGAGATTTCAAAGGAGCTATAAACGTTACTGTTTTCCATCACTGAGGTGTATGAATCAGACTCTTCTCAGTGTTCAAAATTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR-3UTR TCA 90 bp AGCAGAAAGGGAAGCACAACGAGGCTGCTCGGCTTCCCCTTCAGCACAAGGCACAGAGAGGGAAGGATGTaGAAGGCCAATTCTTCGCCG +
Preference number: 2 (lower is better)
Translates to: SRKGSTTRLLGFPFSTRHREGRM*KANSSP
Trigger: CGGCGAAGAATTGGCCTTTCACATCCTTCCCTCTCT...GTGCCTTGTGCTGAAGGGGAAGCCGAGCAGCCTCGTTGTGCTTCCCTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 90 bp ACGGCAAGGGCCATGGTGCCTGACGTTCCTGCTCTCGAAGGGGGATaGTGGGAGAATGGAAATGGGGCGGTCTTCATAAGACAGAATCTC +
Preference number: 2 (lower is better)
Translates to: TARAMVPDVPALEGG*WENGNGAVFIRQNL
Trigger: GAGATTCTGTCTTATGAAGACCGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAGAGCAGGAACGTCAGGCACCATGGCCCTTGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp TGGGCTGAGCGGAGACTCTCCACTGCTCAGATTACTTCTTGGCTCCAGAACCAGCTCCAAAAGCCTGTGTaGTACCTGCAGACTGGTGCC +
Preference number: 2 (lower is better)
Translates to: WAERRLSTAQITSWLQNQLQKPV*YLQTGA
Trigger: GGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAG...CTGGTTCTGGAGCCAAGAAGTAATCTGAGCAGTGGAGAGTCTCCGCTCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp GAAGCCACATCTCTGGGCTCCAGCTTGGTGAAGGTGACCTTTTCCTaGAAGACAGGGTTGGGCCCTCTCTGTATGTTCGTCTTACCCCTC +
Preference number: 2 (lower is better)
Translates to: EATSLGSSLVKVTFS*KTGLGPLCMFVLPL
Trigger: GAGGGGTAAGACGAACATACAGAGAGGGCCCAACCCTGTCTTCAAGGAAAAGGTCACCTTCACCAAGCTGGAGCCCAGAGATGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR TCA 90 bp AGCTTCTCCCCCATCATTCTCTCCCGGGTCATCTTACGGGCAGCATACAGGCGGGAACTTGCCAAGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 2 (lower is better)
Translates to: SFSPIILSRVILRAAYRRELAKS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCTTGGCAAGTTC...CCGCCTGTATGCTGCCCGTAAGATGACCCGGGAGAGAATGATGGGGGAGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp GGAATCTTCAAAGCCCCGACTCACAAAAGCTGTCTCCGTCTCCAGGACGCCATCAACCAGGCTGCATGCTaGCTCTTGCACCAAGGTCTA +
Preference number: 2 (lower is better)
Translates to: GIFKAPTHKSCLRLQDAINQAAC*LLHQGL
Trigger: TAGACCTTGGTGCAAGAGCCAGCATGCAGCCTGGTT...GATGGCGTCCTGGAGACGGAGACAGCTTTTGTGAGTCGGGGCTTTGAAGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp AGCTTCTCCCCCATCATTCTCTCCCGGGTCATCTTACGGGCAGCATACAGGCGGGTGGGAGAATGGAAATaGGGCGGTCTTCATAAGACA +
Preference number: 2 (lower is better)
Translates to: SFSPIILSRVILRAAYRRVGEWK*GGLHKT
Trigger: TGTCTTATGAAGACCGCCCCATTTCCATTCTCCCAC...CCGCCTGTATGCTGCCCGTAAGATGACCCGGGAGAGAATGATGGGGGAGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp AGCAGAAAGGGAAGCACAACGAGGCTGCTCGGCTTCCCCTTCAGCACAAGGCACTCCTGTGCCCTTGTCTaGTCTTGTCAGGATATCCAT +
Preference number: 2 (lower is better)
Translates to: SRKGSTTRLLGFPFSTRHSCALV*SCQDIH
Trigger: ATGGATATCCTGACAAGACCAGACAAGGGCACAGGA...GTGCCTTGTGCTGAAGGGGAAGCCGAGCAGCCTCGTTGTGCTTCCCTTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 90 bp GGGTTGTTGTCCCTGAATTGGGAGCCTGGAATTCAATGTAGCATGTaGACACCTTGGCAGTGGGTGGAAGAGCAGCCATCCGATCCCAGA +
Preference number: 2 (lower is better)
Translates to: GLLSLNWEPGIQCSM*TPWQWVEEQPSDPR
Trigger: TCTGGGATCGGATGGCTGCTCTTCCACCCACTGCCAAGGTGTCAACATGCTACATTGAATTCCAGGCTCCCAATTCAGGGACAACAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CCA 90 bp TGGGCTGAGCGGAGACTCTCCACTGCTCAGATTACTTCTTGGCTCCAGAACCAGTCTGGACTGCCATCGTaGTCCTGTTCTTCATCTTCC +
Preference number: 2 (lower is better)
Translates to: WAERRLSTAQITSWLQNQSGLPS*SCSSSS
Trigger: GGAAGATGAAGAACAGGACCACGATGGCAGTCCAGA...CTGGTTCTGGAGCCAAGAAGTAATCTGAGCAGTGGAGAGTCTCCGCTCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCCTCGAAGGGGGATTGTaGGAGAATGGAAATGGGGCG +
Preference number: 2 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPLEGGL*ENGNGA
Trigger: CGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAG...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp CAGGCTGCATGCTGGCTCTTGCACCAAGGTCTATGGAGTAGGTCTTaGCAGGGAACAGAGCAAGCGTGTTTGACAGGGTGGTCTCTTAAT +
Preference number: 2 (lower is better)
Translates to: QAACWLLHQGLWSRS*QGTEQACLTGWSLN
Trigger: ATTAAGAGACCACCCTGTCAAACACGCTTGCTCTGTTCCCTGCAAAGACCTACTCCATAGACCTTGGTGCAAGAGCCAGCATGCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp ATTGGGTTGGCCACGACGAATGGACGTCTTGCAGCGGGACATCTCTaGACCCACACAGTTGAGGAGGAAGAGTTTTCCATATGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: IGLATTNGRLAAGHL*THTVEEEEFSICVR
Trigger: CCTGACACATATGGAAAACTCTTCCTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGCAAGACGTCCATTCGTCGTGGCCAACCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR TCA 90 bp GGAATCTTCAAAGCCCCGACTCACAAAAGCTGTCTCCGTCTCCAGGACGCCATCCTTCTCAGATACTCCTaGACGAAAACTCTGGGATCG +
Preference number: 2 (lower is better)
Translates to: GIFKAPTHKSCLRLQDAILLRYS*TKTLGS
Trigger: CGATCCCAGAGTTTTCGTTCAGGAGTATCTGAGAAG...GATGGCGTCCTGGAGACGGAGACAGCTTTTGTGAGTCGGGGCTTTGAAGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp GGTCTCTTTATAGACAGGATTGGGTTGGCCACGACGAATGGACGTCTTGCAGCGCCCTCTGTTTCTTGCTaGGCAGCAGCACTATGTGAA +
Preference number: 2 (lower is better)
Translates to: GLFIDRIGLATTNGRLAAPSVSC*AAALCE
Trigger: TTCACATAGTGCTGCTGCCCAGCAAGAAACAGAGGG...CGCTGCAAGACGTCCATTCGTCGTGGCCAACCCAATCCTGTCTATAAAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp GCATCTAAGTCCTGCTCTGGCTTATCACTCAATGCCGAATCGTGTTaGCTAAGAAGGACCAGTGAAGCAGATAATGCATCCCCGGCTTGC +
Preference number: 2 (lower is better)
Translates to: ASKSCSGLSLNAESC*LRRTSEADNASPAC
Trigger: GCAAGCCGGGGATGCATTATCTGCTTCACTGGTCCTTCTTAGCAAACACGATTCGGCATTGAGTGATAAGCCAGAGCAGGACTTAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR TCA 90 bp ATTCCCTCTTTCGGGCAACTAAAGGCTAGCCACCAACTTAGGGACTGCCAGCAGCTTCTTTCTCAAGCGTaGGTAGAAGGAGGGAATACT +
Preference number: 2 (lower is better)
Translates to: IPSFGQLKASHQLRDCQQLLSQA*VEGGNT
Trigger: AGTATTCCCTCCTTCTACTCACGCTTGAGAAAGAAG...CTGCTGGCAGTCCCTAAGTTGGTGGCTAGCCTTTAGTTGCCCGAAAGAGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 90 bp AGGAAGAGTTTTCCATATGTGTCAGGAGCTCGGTTAGCAGCGAGGTaGCGGAAATGGCTGCCTTTGATCATTTCCACAGATAATCGCCCT +
Preference number: 2 (lower is better)
Translates to: RKSFPYVSGARLAAR*RKWLPLIISTDNRP
Trigger: AGGGCGATTATCTGTGGAAATGATCAAAGGCAGCCATTTCCGCAACCTCGCTGCTAACCGAGCTCCTGACACATATGGAAAACTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp CTCTTCAAAGATACTTCAGAGGCAGGCACTAATTCAGCTTTCCATTaGAGGACAGTGGGGTGTGGGCTGGGCAAGTCATTTTCTCATGGC +
Preference number: 2 (lower is better)
Translates to: LFKDTSEAGTNSAFH*RTVGCGLGKSFSHG
Trigger: GCCATGAGAAAATGACTTGCCCAGCCCACACCCCACTGTCCTCAAATGGAAAGCTGAATTAGTGCCTGCCTCTGAAGTATCTTTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR TCA 90 bp GCACACACCTATAATTCCAGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTGGCCTGGATCTTTTCTaGGACCTCATGCTGTCAGAA +
Preference number: 2 (lower is better)
Translates to: AHTYNSSTEGKRSRRIRSGLDLF*DLMLSE
Trigger: TTCTGACAGCATGAGGTCTCAGAAAAGATCCAGGCC...ACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCTGGAATTATAGGTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp TGGCCCAGAGCGACCCAGCCGATCATCTCTTTACGCTTCATAGTGCGCCTGCTGCCAAAGCTGTTAACTTaGTTTCTTCCATTAACCTTT +
Preference number: 2 (lower is better)
Translates to: WPRATQPIISLRFIVRLLPKLLT*FLPLTF
Trigger: AAAGGTTAATGGAAGAAAGCAAGTTAACAGCTTTGG...CAGCAGGCGCACTATGAAGCGTAAAGAGATGATCGGCTGGGTCGCTCTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR GCA 90 bp TGGCCCAGAGCGACCCAGCCGATCATCTCTTTACGCTTCATAGTGCGCCTGCTGACTGAGATCTTGAATTaGTTAGTCACATCTTCATCA +
Preference number: 2 (lower is better)
Translates to: WPRATQPIISLRFIVRLLTEILN*LVTSSS
Trigger: TGATGAAGATGTGACTAAGCAATTCAAGATCTCAGT...CAGCAGGCGCACTATGAAGCGTAAAGAGATGATCGGCTGGGTCGCTCTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAAGTGACGTCCGAGAGCTaGAAGAGGGCCACCTGGAAG +
Preference number: 2 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKVTSES*KRATWK
Trigger: CTTCCAGGTGGCCCTCTTCCAGCTCTCGGACGTCAC...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp TATAATTCCAGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTTaGTCATCCTCAGCTACCCAGGGACCAGAAGTTCATGGTCATCCT +
Preference number: 2 (lower is better)
Translates to: YNSSTEGKRSRRIRS*SSSATQGPEVHGHP
Trigger: AGGATGACCATGAACTTCTGGTCCCTGGGTAGCTGAGGATGACAAACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCTGGAATTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR TCA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGGTTCCTCCTGAACTCTaGACTTATGTGAAATATAGA +
Preference number: 2 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLVPPEL*TYVKYR
Trigger: TCTATATTTCACATAAGTTCAGAGTTCAGGAGGAAC...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR TCA 90 bp CTTTTCCTTGAAGACAGGGTTGGGCCCTCTCTGTATGTTCGTCTTACCCCTCTGTTGTTCCGTTCCTCCTaGACTCTGAACTTATGTGAA +
Preference number: 2 (lower is better)
Translates to: LFLEDRVGPSLYVRLTPLLFRSS*TLNLCE
Trigger: TTCACATAAGTTCAGAGTTCAGGAGGAACGGAACAA...CAGAGGGGTAAGACGAACATACAGAGAGGGCCCAACCCTGTCTTCAAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR TCA 90 bp CTTTTCCTTGAAGACAGGGTTGGGCCCTCTCTGTATGTTCGTCTTACCCCTCTGCTCTATATTCAAAGATaGCATCGAGGTCACCGCATT +
Preference number: 2 (lower is better)
Translates to: LFLEDRVGPSLYVRLTPLLYIQR*HRGHRI
Trigger: AATGCGGTGACCTCGATGTCATCTTTGAATATAGAG...CAGAGGGGTAAGACGAACATACAGAGAGGGCCCAACCCTGTCTTCAAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR GCA 90 bp GACCATAAGTCACTTCCCGGTCTTCCCACCTCCCACACAACAACTGCATCATTCTTTTCTGAGACCTCATaGTGTCAGAATGCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: DHKSLPGLPTSHTTTASFFSETS*CQNAEC
Trigger: ACACTCAGCATTCTGACAGCATGAGGTCTCAGAAAA...GAATGATGCAGTTGTTGTGTGGGAGGTGGGAAGACCGGGAAGTGACTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 90 bp GGAAATGGGGCGGTCTTCATAAGACAGAATCTCAGAATAACTAAGTaGGCTGGTTCGATCCAAATCTTCACAAGCAGACCCTTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: GNGAVFIRQNLRITK*AGSIQIFTSRPFSA
Trigger: AGCGCTGAAGGGTCTGCTTGTGAAGATTTGGATCGAACCAGCCAACTTAGTTATTCTGAGATTCTGTCTTATGAAGACCGCCCCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 90 bp TCTGACTCATGTCAGATAATCAAGGCTGACATAACAGGAATGCTGTaGGTAAATCTAGGATTCCAACAGCGTATGCCACCGGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SDSCQIIKADITGML*VNLGFQQRMPPAGL
Trigger: CAGACCTGCCGGTGGCATACGCTGTTGGAATCCTAGATTTACCAACAGCATTCCTGTTATGTCAGCCTTGATTATCTGACATGAGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAAGGGACCCCAAAGCCATaGATGCAGGCAACATGTAGA +
Preference number: 2 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKGTPKP*MQATCR
Trigger: TCTACATGTTGCCTGCATCCATGGCTTTGGGGTCCC...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CCA 90 bp GCACACACCTATAATTCCAGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTCAAGTCATTTTCTCATaGCCACATAGCAGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: AHTYNSSTEGKRSRRIRSQVIFS*PHSRFH
Trigger: ATGGAACCTGCTATGTGGCCATGAGAAAATGACTTG...ACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCTGGAATTATAGGTGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CCA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATATAAAGAGAATGGGGTaGCAGAGGATTGCGGATTGG +
Preference number: 2 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHIKRMG*QRIADW
Trigger: CCAATCCGCAATCCTCTGCCACCCCATTCTCTTTAT...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 90 bp TCAGATACTCCTGAACGAAAACTCTGGGATCGGGACACTGAGATCTaGAATTGCTTAGTCACATCTTCATCACTCTCAGAAGATGTGGAT +
Preference number: 2 (lower is better)
Translates to: SDTPERKLWDRDTEI*NCLVTSSSLSEDVD
Trigger: ATCCACATCTTCTGAGAGTGATGAAGATGTGACTAAGCAATTCAAGATCTCAGTGTCCCGATCCCAGAGTTTTCGTTCAGGAGTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR TCA 90 bp GCACACACCTATAATTCCAGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTTGGAATTTTGAACACTaGGAAGAGTCTGATTCATAC +
Preference number: 2 (lower is better)
Translates to: AHTYNSSTEGKRSRRIRSWNFEH*EESDSY
Trigger: GTATGAATCAGACTCTTCTCAGTGTTCAAAATTCCA...ACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCTGGAATTATAGGTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR TCA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATCAGAAAACCCAAAACTaGGTGAGTCAAGGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHQKTQN*VSQGAE
Trigger: TTCTGCTCCTTGACTCACTCAGTTTTGGGTTTTCTG...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAACACTCTCAGAAGATGTaGATGGCTCTTCATCATCCC +
Preference number: 2 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKHSQKM*MALHHP
Trigger: GGGATGATGAAGAGCCATCCACATCTTCTGAGAGTG...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGATAAAGAGAATGGGGTaGCAGAGGATTGCGGATTGG +
Preference number: 2 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKIKRMG*QRIADW
Trigger: CCAATCCGCAATCCTCTGCCACCCCATTCTCTTTAT...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR-3UTR TCA 90 bp AATTCTTCTAATGTTATAGGAAAAGCAGGGCTTCCTCTGTCCAACAGTTATGCGAAACCCAAAACTGAGTaGGTCAAGGAGCAGAACATA +
Preference number: 2 (lower is better)
Translates to: NSSNVIGKAGLPLSNSYAKPKTE*VKEQNI
Trigger: TATGTTCTGCTCCTTGACTCACTCAGTTTTGGGTTT...CGCATAACTGTTGGACAGAGGAAGCCCTGCTTTTCCTATAACATTAGAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTATCTGGGAGACCCTGTaGTCTCACAATGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLIWETL*SHNGHS
Trigger: ACTGTGACCATTGTGAGAGCACAGGGTCTCCCAGAT...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR GCA 90 bp CCTATCTCCAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATGAGTCTTTCGCTGGGTCCTTTAAATaGTCTGAGAATTCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: PISKLFPCSLKSFTDESFAGSFK*SENSVS
Trigger: TGACACTGAATTCTCAGAGCATTTAAAGGACCCAGC...GAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTGGAGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGGCTGAGAGTGAATGCTaGTGTATAATCAAGACGCAC +
Preference number: 2 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKAESEC*CIIKTH
Trigger: GTGCGTCTTGATTATACAGCAGCATTCACTCTCAGC...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR TCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTCTTGTCTTTAGAATTTaGTGTCTGCACCATCCGCTG +
Preference number: 2 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLLVFRI*CLHHPL
Trigger: CAGCGGATGGTGCAGACATCAAATTCTAAAGACAAG...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp CCTATCTCCAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATGAGTCTTTCAGTTTATTCTGCAAATaGTCACCCCTCCATATAACA +
Preference number: 2 (lower is better)
Translates to: PISKLFPCSLKSFTDESFSLFCK*SPLHIT
Trigger: TGTTATATGGAGGGGTGAGCATTTGCAGAATAAACT...GAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTGGAGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp AATTCTTCTAATGTTATAGGAAAAGCAGGGCTTCCTCTGTCCAACAGTTATGCGTTTGGGTCTAGACTTTaGCAAGAAAATAAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: NSSNVIGKAGLPLSNSYAFGSRL*QENKRV
Trigger: GACTCTCTTATTTTCTTGGCAAAGTCTAGACCCAAA...CGCATAACTGTTGGACAGAGGAAGCCCTGCTTTTCCTATAACATTAGAAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTACGTTCTTCAAGTGTTaGAGCCTACGCTTACAATCT +
Preference number: 2 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLTFFKC*SLRLQS
Trigger: AGATTGTAAGCGTAGGCTGCAACACTTGAAGAACGT...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR TCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTCTTTCAGAACTCTTTTaGGAAGCAAATGTAGCTGTA +
Preference number: 2 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLLSELF*EANVAV
Trigger: TACAGCTACATTTGCTTCTCAAAAGAGTTCTGAAAG...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR GCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTAAATTTGAAAATGAATaGTGCTATTATGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLKFENE*CYYASS
Trigger: GCTGCTGGCATAATAGCAGCATTCATTTTCAAATTT...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CCA 90 bp CAGAAACATCGAGAAAGCCAAGACTTAAATTATCTTCTAGGTTTTCCTCTTCTTAAATCCAGGGCTGTCTaGACAATATATACAGATTTT +
Preference number: 2 (lower is better)
Translates to: QKHRESQDLNYLLGFPLLKSRAV*TIYTDF
Trigger: AAAATCTGTATATATTGTCCAGACAGCCCTGGATTT...AAGAAGAGGAAAACCTAGAAGATAATTTAAGTCTTGGCTTTCTCGATGTTTCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp TCCCAGTGTTCCTGCTCCTCCTCCCCACTGCTGTTCTaGCCCAGAGCGACCCAGCCGATCATCTCTTTACGC +
Preference number: 3 (lower is better)
Translates to: SQCSCSSSPLLF*PRATQPIISLR
Trigger: GCGTAAAGAGATGATCGGCTGGGTCGCTCTGGGCCAGAACAGCAGTGGGGAGGAGGAGCAGGAACACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp CACGGGGGTATTACAGAGCTTGAGTCTTCGGCTTGCTaGCCAAGCGTGGGGCTTGCCGTTTGGACGGAGTCC +
Preference number: 3 (lower is better)
Translates to: HGGITELESSAC*PSVGLAVWTES
Trigger: GGACTCCGTCCAAACGGCAAGCCCCACGCTTGGTCAGCAAGCCGAAGACTCAAGCTCTGTAATACCCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp TGGGATCTTACTGGGCCACGGGGGTATTACAGAGCTTaGGTCTTCGGCTTGCTGACCAAGCGTGGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: WDLTGPRGYYRA*VFGLLTKRGAC
Trigger: GCAAGCCCCACGCTTGGTCAGCAAGCCGAAGACTCAAGCTCTGTAATACCCCCGTGGCCCAGTAAGATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 72 bp ACTCACAAAAGCTGTCTCCGTCTCCAGGACGCCATCTaGACAAGGACGACCGAGGCTTCGGACCATGCCCAT +
Preference number: 3 (lower is better)
Translates to: THKSCLRLQDAI*TRTTEASDHAH
Trigger: ATGGGCATGGTCCGAAGCCTCGGTCGTCCTTGTGCAGATGGCGTCCTGGAGACGGAGACAGCTTTTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 72 bp AAAAGCCTGTGTGGTACCTGCAGACTGGTGCCATCCTaGTCCTCTGGACTCCACAGAGAGGAACTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: KSLCGTCRLVPS*SSGLHREELWV
Trigger: CACCCACAGTTCCTCTCTGTGGAGTCCAGAGGAGCAGGATGGCACCAGTCTGCAGGTACCACACAGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp TTACAGAGCTTGAGTCTTCGGCTTGCTGACCAAGCGTaGGGCTTGCCGTTTGGACGGAGTCCTGCAGATCAC +
Preference number: 3 (lower is better)
Translates to: LQSLSLRLADQA*GLPFGRSPADH
Trigger: GTGATCTGCAGGACTCCGTCCAAACGGCAAGCCCCACGCTTGGTCAGCAAGCCGAAGACTCAAGCTCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp GCAGCTCTGGCACCCCTCCATGAGACAGTGACTGCGTaGATGAAGCACTGTCACTGTGAGACACCACAGATG +
Preference number: 3 (lower is better)
Translates to: AALAPLHETVTA*MKHCHCETPQM
Trigger: CATCTGTGGTGTCTCACAGTGACAGTGCTTCATCCACGCAGTCACTGTCTCATGGAGGGGTGCCAGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp GATCCTGTCTCAAAACCACCACCACCGCATAGAAGATaGTTGGCCCATGCTACCCAGTGGCACCTGAGGTGC +
Preference number: 3 (lower is better)
Translates to: DPVSKPPPPHRR*LAHATQWHLRC
Trigger: GCACCTCAGGTGCCACTGGGTAGCATGGGCCAATCATCTTCTATGCGGTGGTGGTGGTTTTGAGACAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp ATTATGCCAGCAGCAGAAAGGGAAGCACAACGAGGCTaGTCGGCTTCCCCTTCAGCACAAGGCACACAGAGA +
Preference number: 3 (lower is better)
Translates to: IMPAAEREAQRG*SASPSAQGTQR
Trigger: TCTCTGTGTGCCTTGTGCTGAAGGGGAAGCCGAGCAGCCTCGTTGTGCTTCCCTTTCTGCTGCTGGCATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp GACAGTGGGGTGTGGGCTGGGCAAGTCATTTTCTCATaGCCACATAGCAGGTTCCATCTGAACCCACCTACG +
Preference number: 3 (lower is better)
Translates to: DSGVWAGQVIFS*PHSRFHLNPPT
Trigger: CGTAGGTGGGTTCAGATGGAACCTGCTATGTGGCCATGAGAAAATGACTTGCCCAGCCCACACCCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CAA 90 bp GGAATCTTCAAAGCCCCGACTCACAAAAGCTGTCTCCGTCTCCAGGACGCCATCCTATGGAGTAGGTCTTaGCAGGGAACAGAGCAAGCG +
Preference number: 3 (lower is better)
Translates to: GIFKAPTHKSCLRLQDAILWSRS*QGTEQA
Trigger: CGCTTGCTCTGTTCCCTGCAAAGACCTACTCCATAG...GATGGCGTCCTGGAGACGGAGACAGCTTTTGTGAGTCGGGGCTTTGAAGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CAA 90 bp AAATCTAGGATTCCAACAGCGTATGCCACCGGCAGGTCTGCTGGCCCTTGCTTTGCTGCATGCTGGCTCTaGCACCAAGGTCTATGGAGT +
Preference number: 3 (lower is better)
Translates to: KSRIPTAYATGRSAGPCFAACWL*HQGLWS
Trigger: ACTCCATAGACCTTGGTGCAAGAGCCAGCATGCAGC...AAAGCAAGGGCCAGCAGACCTGCCGGTGGCATACGCTGTTGGAATCCTAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 72 bp CATTTTGAGATAGGCTCCAAAAGCCTGTGTGGTACCTaGAGACTGGTGCCATCCTGCTCCTCTGGACTCCAC +
Preference number: 3 (lower is better)
Translates to: HFEIGSKSLCGT*RLVPSCSSGLH
Trigger: GTGGAGTCCAGAGGAGCAGGATGGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAGCCTATCTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp AACCAGGCTGCATGCTGGCTCTTGCACCAAGGTCTATaGAGTAGGTCTTTGCAGGGAACAGAGCAAGCGTGT +
Preference number: 3 (lower is better)
Translates to: NQAACWLLHQGL*SRSLQGTEQAC
Trigger: ACACGCTTGCTCTGTTCCCTGCAAAGACCTACTCCATAGACCTTGGTGCAAGAGCCAGCATGCAGCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp ATGGTGCCTGACGTTCCTGCTCTCGAAGGGGGATTGTaGGAGAATGGAAATGGGGCGGTCTTCATAAGACAG +
Preference number: 3 (lower is better)
Translates to: MVPDVPALEGGL*ENGNGAVFIRQ
Trigger: CTGTCTTATGAAGACCGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAGAGCAGGAACGTCAGGCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp TCTATCCCCGTGACACAGTCGCACTGCAAAGACCACTaGGCAGTTAGTGGGCAAGATGCTGAGAAGACACTC +
Preference number: 3 (lower is better)
Translates to: SIPVTQSHCKDH*AVSGQDAEKTL
Trigger: GAGTGTCTTCTCAGCATCTTGCCCACTAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGGGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp TGGGAGCCTGGAATTCAATGTAGCATGTTGACACCTTaGCAGTGGGTGGAAGAGCAGCCATCCGATCCCAGA +
Preference number: 3 (lower is better)
Translates to: WEPGIQCSMLTP*QWVEEQPSDPR
Trigger: TCTGGGATCGGATGGCTGCTCTTCCACCCACTGCCAAGGTGTCAACATGCTACATTGAATTCCAGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CCGCTCCTCTATCAATTGCACTCAGTTCTATCCCCGTaGCACAGTCGCACTGCAAAGACCACTGGGCAGTTA +
Preference number: 3 (lower is better)
Translates to: PLLYQLHSVLSP*HSRTAKTTGQL
Trigger: TAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGGGATAGAACTGAGTGCAATTGATAGAGGAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CCCCTTCAGCACAAGGCACACAGAGAGGGAAGGATGTaGAAGGCCAATTCTTCGCCGCTCCTCTATCAATTG +
Preference number: 3 (lower is better)
Translates to: PLQHKAHREGRM*KANSSPLLYQL
Trigger: CAATTGATAGAGGAGCGGCGAAGAATTGGCCTTTCACATCCTTCCCTCTCTGTGTGCCTTGTGCTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CCGTGTCTCGGAGACGGCAATCTGACCCAAGGGGAATaGAAACAGTTGACAGTCAATGCACCATACACGAGG +
Preference number: 3 (lower is better)
Translates to: PCLGDGNLTQGE*KQLTVNAPYTR
Trigger: CCTCGTGTATGGTGCATTGACTGTCAACTGTTTTCATTCCCCTTGGGTCAGATTGCCGTCTCCGAGACACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp CCTCTTCAAGAAACAGGGAGCTTGCCTCCTCTGGACTaGCATCGTGGTCCTGTTCTTCATCTTCCAAGTAGG +
Preference number: 3 (lower is better)
Translates to: PLQETGSLPPLD*HRGPVLHLPSR
Trigger: CCTACTTGGAAGATGAAGAACAGGACCACGATGGCAGTCCAGAGGAGGCAAGCTCCCTGTTTCTTGAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 72 bp TCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTaGAAGTGGCTGAGACAGAACAGCTTCTCCCCCATC +
Preference number: 3 (lower is better)
Translates to: SRTRVTFISPSG*KWLRQNSFSPI
Trigger: GATGGGGGAGAAGCTGTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 72 bp ATTGCACTCAGTTCTATCCCCGTGACACAGTCGCACTaGAAAGACCACTGGGCAGTTAGTGGGCAAGATGCT +
Preference number: 3 (lower is better)
Translates to: IALSSIPVTQSH*KDHWAVSGQDA
Trigger: AGCATCTTGCCCACTAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGGGATAGAACTGAGTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp CAAGTCCTCTGCATGGAAAGGACAGCCAGGTCTGGGTaGACACAAAGCACAGTGCTCACACTGAAAGATCAG +
Preference number: 3 (lower is better)
Translates to: QVLCMERTARSG*TQSTVLTLKDQ
Trigger: CTGATCTTTCAGTGTGAGCACTGTGCTTTGTGTCCACCCAGACCTGGCTGTCCTTTCCATGCAGAGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp ATGAAGCACTGTCACTGTGAGACACCACAGATGGGCTaGGCGGAGACTCTCCACTGCTCAGATTACTTCTTG +
Preference number: 3 (lower is better)
Translates to: MKHCHCETPQMG*AETLHCSDYFL
Trigger: CAAGAAGTAATCTGAGCAGTGGAGAGTCTCCGCTCAGCCCATCTGTGGTGTCTCACAGTGACAGTGCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp CCTGGAATTCAATGTAGCATGTTGACACCTTGGCAGTaGGTGGAAGAGCAGCCATCCGATCCCAGAATCACA +
Preference number: 3 (lower is better)
Translates to: PGIQCSMLTPWQ*VEEQPSDPRIT
Trigger: TGTGATTCTGGGATCGGATGGCTGCTCTTCCACCCACTGCCAAGGTGTCAACATGCTACATTGAATTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp GTCACTTCCCGGTCTTCCCACCTCCCACACAACAACTaGATCATTCCTACTTATCCCCACTGGAAAGCATTA +
Preference number: 3 (lower is better)
Translates to: VTSRSSHLPHNN*IIPTYPHWKAL
Trigger: TAATGCTTTCCAGTGGGGATAAGTAGGAATGATGCAGTTGTTGTGTGGGAGGTGGGAAGACCGGGAAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp CAGCCTACGCTTACAATCTGTCAAAATGTAGAGCTGTaGGGGAAGTTCTGCGGCTTTGACTTCGTGTATCCG +
Preference number: 3 (lower is better)
Translates to: QPTLTICQNVEL*GKFCGFDFVYP
Trigger: CGGATACACGAAGTCAAAGCCGCAGAACTTCCCCCACAGCTCTACATTTTGACAGATTGTAAGCGTAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp AGTCTTTCCACATCTTCATGTACCAAGTCCTCTGCATaGAAAGGACAGCCAGGTCTGGGTGGACACAAAGCA +
Preference number: 3 (lower is better)
Translates to: SLSTSSCTKSSA*KGQPGLGGHKA
Trigger: TGCTTTGTGTCCACCCAGACCTGGCTGTCCTTTCCATGCAGAGGACTTGGTACATGAAGATGTGGAAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp AGTGTACAGTGTCCTCTCCAGTGGGGTTCTACTTTCTaGGTCATTGTGACCATAAGTCACTTCCCGGTCTTC +
Preference number: 3 (lower is better)
Translates to: SVQCPLQWGSTF*VIVTISHFPVF
Trigger: GAAGACCGGGAAGTGACTTATGGTCACAATGACCCAGAAAGTAGAACCCCACTGGAGAGGACACTGTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CGTTTGGACGGAGTCCTGCAGATCACTATTAGAGAGTaGGAAATGGTCCTCTTCAAGAAACAGGGAGCTTGC +
Preference number: 3 (lower is better)
Translates to: RLDGVLQITIRE*EMVLFKKQGAC
Trigger: GCAAGCTCCCTGTTTCTTGAAGAGGACCATTTCTCACTCTCTAATAGTGATCTGCAGGACTCCGTCCAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp TCAAAATGTAGAGCTGTGGGGGAAGTTCTGCGGCTTTaGCTTCGTGTATCCGTCACTAGCTATCACTCTTCC +
Preference number: 3 (lower is better)
Translates to: SKCRAVGEVLRL*LRVSVTSYHSS
Trigger: GGAAGAGTGATAGCTAGTGACGGATACACGAAGTCAAAGCCGCAGAACTTCCCCCACAGCTCTACATTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp ATACTTCAGAGGCAGGCACTAATTCAGCTTTCCATTTaGGGACAGTGGGGTGTGGGCTGGGCAAGTCATTTT +
Preference number: 3 (lower is better)
Translates to: ILQRQALIQLSI*GQWGVGWASHF
Trigger: AAAATGACTTGCCCAGCCCACACCCCACTGTCCTCAAATGGAAAGCTGAATTAGTGCCTGCCTCTGAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp TTCGGGCAACTAAAGGCTAGCCACCAACTTAGGGACTaGCAGCAGTTTTTCCCTGATTCCTTTAGCCAAATG +
Preference number: 3 (lower is better)
Translates to: FGQLKASHQLRD*QQFFPDSFSQM
Trigger: CATTTGGCTAAAGGAATCAGGGAAAAACTGCTGGCAGTCCCTAAGTTGGTGGCTAGCCTTTAGTTGCCCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp TCCTGCTCTCGAAGGGGGATTGTGGGAGAATGGAAATaGGGCGGTCTTCATAAGACAGAATCTCAGAATAAC +
Preference number: 3 (lower is better)
Translates to: SCSRRGIVGEWK*GGLHKTESQNN
Trigger: GTTATTCTGAGATTCTGTCTTATGAAGACCGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAGAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CAA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGGCAGCGGGACATCTCTaGACCCACACAGTTGAGGAG +
Preference number: 3 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKAAGHL*THTVEE
Trigger: CTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGC...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp AGTTCTGGACATCCTGAGATGCCATGGTCAACACCATaGTCAAATACCTCGTGTCTGCAGAGTCCACTTGTT +
Preference number: 3 (lower is better)
Translates to: SSGHPEMPWSTP*SNTSCLQSPLV
Trigger: AACAAGTGGACTCTGCAGACACGAGGTATTTGATCATGGTGTTGACCATGGCATCTCAGGATGTCCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp CAGGAAGACAAAGGCTGGAAGAAGTTCTGGACATCCTaGGATGCCATGGTCAACACCATGATCAAATACCTC +
Preference number: 3 (lower is better)
Translates to: QEDKGWKKFWTS*DAMVNTMIKYL
Trigger: GAGGTATTTGATCATGGTGTTGACCATGGCATCTCAGGATGTCCAGAACTTCTTCCAGCCTTTGTCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR GCA 72 bp ACAATCTGTCAAAATGTAGAGCTGTGGGGGAAGTTCTaGGGCTTTGACTTCGTGTATCCGTCACTAGCTATC +
Preference number: 3 (lower is better)
Translates to: TICQNVELWGKF*GFDFVYPSLAI
Trigger: GATAGCTAGTGACGGATACACGAAGTCAAAGCCGCAGAACTTCCCCCACAGCTCTACATTTTGACAGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp ATTTTACAAGCACACACTTTAGGAACAGAACCATCATaGAACAAAACGCGGTACCGCTTCCACGTCAACCCC +
Preference number: 3 (lower is better)
Translates to: ILQAHTLGTEPS*NKTRYRFHVNP
Trigger: GGGGTTGACGTGGAAGCGGTACCGCGTTTTGTTGCATGATGGTTCTGTTCCTAAAGTGTGTGCTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp AAGGGAAGGAGGGGGAACCCAGAGCAGGTGTGTGTCTaGCTGATGAATAGTCCATTAAGAAAGAAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: KGRRGNPEQVCV*LMNSPLRKKEK
Trigger: CTTTTCTTTCTTTCTTAATGGACTATTCATCAGGCAGACACACACCTGCTCTGGGTTCCCCCTCCTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp TCTTCACAAGCAGACCCTTCAGCGCTGTCTTCCTGGTaGGTACACAGCAAACGTTTGCATTTTATTTTCTGC +
Preference number: 3 (lower is better)
Translates to: SSQADPSALSSW*VHSKRLHFIFC
Trigger: GCAGAAAATAAAATGCAAACGTTTGCTGTGTACCCACCAGGAAGACAGCGCTGAAGGGTCTGCTTGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp AGACCCTGTGCTCTCACAATGGTCACAGTGAGCTTCTaGGTTACAGCTCTATATTCAAAGATGACATCGAGG +
Preference number: 3 (lower is better)
Translates to: RPCALTMVTVSF*VTALYSKMTSR
Trigger: CCTCGATGTCATCTTTGAATATAGAGCTGTAACCCAGAAGCTCACTGTGACCATTGTGAGAGCACAGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CCA 72 bp ACCTACGTCCACACAGCATGTGCTCACTTCACTGTCTaGGGTCTGTTTTGTTCAACACCATTAAGTGAGATC +
Preference number: 3 (lower is better)
Translates to: TYVHTACAHFTV*GLFCSTPLSEI
Trigger: GATCTCACTTAATGGTGTTGAACAAAACAGACCCCAGACAGTGAAGTGAGCACATGCTGTGTGGACGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp TTCATGTCCAATGTCTCCGGGTTGTTGTCCCTGAATTaGGAGCCTGGAATTCAATGTAGCATGTTGACACCT +
Preference number: 3 (lower is better)
Translates to: FMSNVSGLLSLN*EPGIQCSMLTP
Trigger: AGGTGTCAACATGCTACATTGAATTCCAGGCTCCCAATTCAGGGACAACAACCCGGAGACATTGGACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp TCTATATTCAAAGATGACATCGAGGTCACCGCATTTTaGGATAGGCTCCAAAAGCCTGTGTGGTACCTGCAG +
Preference number: 3 (lower is better)
Translates to: SIFKDDIEVTAF*DRLQKPVWYLQ
Trigger: CTGCAGGTACCACACAGGCTTTTGGAGCCTATCTCAAAATGCGGTGACCTCGATGTCATCTTTGAATATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp ATCCTAAGCTCACTATCCCAGCAGAAAACCCAAAACTaGGTGAGTCAAGGAGCAGAACATAAAGCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: ILSSLSQQKTQN*VSQGAEHKAEV
Trigger: CACCTCTGCTTTATGTTCTGCTCCTTGACTCACTCAGTTTTGGGTTTTCTGCTGGGATAGTGAGCTTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp AATTTGATGTCTGCACCATCCGCTGAGAGTGAATGCTaGTGTATAATCAAGACGCACACGTGTTATACGACG +
Preference number: 3 (lower is better)
Translates to: NLMSAPSAESEC*CIIKTHTCYTT
Trigger: CGTCGTATAACACGTGTGCGTCTTGATTATACAGCAGCATTCACTCTCAGCGGATGGTGCAGACATCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp AGTCTCATTGTTAAGTGTCCTCTGACTCTATCCATGTaGAAGATCAGACAGTGTACAGTGTCCTCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: SLIVKCPLTLSM*KIRQCTVSSPV
Trigger: CACTGGAGAGGACACTGTACACTGTCTGATCTTGCACATGGATAGAGTCAGAGGACACTTAACAATGAGACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp TCCTGTGATCTGGTAGAGTTTTCCTGTGCCCTTGTCTaGTCTTGTCAGGATATCCATTATGAAGTGCAAGGA +
Preference number: 3 (lower is better)
Translates to: SCDLVEFSCALV*SCQDIHYEVQG
Trigger: TCCTTGCACTTCATAATGGATATCCTGACAAGACCAGACAAGGGCACAGGAAAACTCTACCAGATCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp ACAGGGATGACAGGGTTCTCAATAGAACCTTCCAGTTaGACAACGACTCTGTCTTCACTGCTGAAAATTCCT +
Preference number: 3 (lower is better)
Translates to: TGMTGFSIEPSS*TTTLSSLLKIP
Trigger: AGGAATTTTCAGCAGTGAAGACAGAGTCGTTGTCCAACTGGAAGGTTCTATTGAGAACCCTGTCATCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CAA 90 bp ACACAGTTTAAAACACAAACAGGGCTTGGGGATAGAGCTCAGTTCTTAGGGTGTAATAGAACCTTCCAGTaGGACAACGACTCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: TQFKTQTGLGDRAQFLGCNRTFQ*DNDSVF
Trigger: GAAGACAGAGTCGTTGTCCAACTGGAAGGTTCTATT...ACACCCTAAGAACTGAGCTCTATCCCCAAGCCCTGTTTGTGTTTTAAACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CACTGTCTGGGGTCTGTTTTGTTCAACACCATTAAGTaGGATCCTATCTCCAAATTGTTTCCATGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: HCLGSVLFNTIK*DPISKLFPCSL
Trigger: GAGGCTGCATGGAAACAATTTGGAGATAGGATCTCACTTAATGGTGTTGAACAAAACAGACCCCAGACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp AAATCTGGTGATACCTCGGGGAAATCTGCCTTCTCATaGAGCTCAAAGTCGATTGGTGATACTGTCATACAG +
Preference number: 3 (lower is better)
Translates to: KSGDTSGKSAFS*SSKSIGDTVIQ
Trigger: CTGTATGACAGTATCACCAATCGACTTTGAGCTTCATGAGAAGGCAGATTTCCCCGAGGTATCACCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp AAATCTTCACAAGCAGACCCTTCAGCGCTGTCTTCCTaGTGGGTACACAGCAAACGTTTGCATTTTATTTTC +
Preference number: 3 (lower is better)
Translates to: KSSQADPSALSS*WVHSKRLHFIF
Trigger: GAAAATAAAATGCAAACGTTTGCTGTGTACCCACCAGGAAGACAGCGCTGAAGGGTCTGCTTGTGAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR-3UTR CAA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATGGAGAATGTCACCACTaGTATCAACGCCTGAATTGT +
Preference number: 3 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHGECHH*YQRLNC
Trigger: ACAATTCAGGCGTTGATACAAGTGGTGACATTCTCC...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp TTTATTATTCATAAAGAGAATGGGGTGGCAGAGGATTaGGGATTGGTTACACCCTTCCTTAGCACTCAGCAT +
Preference number: 3 (lower is better)
Translates to: FIIHKENGVAED*GLVTPFLSTQH
Trigger: ATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATGAATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CCA 72 bp CTTAGTCACATCTTCATCACTCTCAGAAGATGTGGATaGCTCTTCATCATCCCCAAAGCTGTTAACTTGCTT +
Preference number: 3 (lower is better)
Translates to: LSHIFITLRRCG*LFIIPKAVNLL
Trigger: AAGCAAGTTAACAGCTTTGGGGATGATGAAGAGCCATCCACATCTTCTGAGAGTGATGAAGATGTGACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR TCA 72 bp CTGTGCCCTTGTCTGGTCTTGTCAGGATATCCATTATaGAGTGCAAGGAATAAATACGTTCTTCAAGTGTTG +
Preference number: 3 (lower is better)
Translates to: LCPCLVLSGYPL*SARNKYVLQVL
Trigger: CAACACTTGAAGAACGTATTTATTCCTTGCACTTCATAATGGATATCCTGACAAGACCAGACAAGGGCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATaGGTCTTTCCACATCTTCATGTACCAAGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: QIVSMQPQVIYR*VFPHLHVPSPL
Trigger: CAGAGGACTTGGTACATGAAGATGTGGAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CAA 90 bp ACACAGTTTAAAACACAAACAGGGCTTGGGGATAGAGCTCAGTTCTTAGGGTGTACGTTTCAGTGCATCTaGTCTTTAGAATTTGATGTC +
Preference number: 3 (lower is better)
Translates to: TQFKTQTGLGDRAQFLGCTFQCI*SLEFDV
Trigger: GACATCAAATTCTAAAGACAAGATGCACTGAAACGT...ACACCCTAAGAACTGAGCTCTATCCCCAAGCCCTGTTTGTGTTTTAAACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CAA 90 bp CCTATCTCCAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATGAGTCTTTCACGTTTATAGCTCCTTaGAAATCTCAGGCTATTCTC +
Preference number: 3 (lower is better)
Translates to: PISKLFPCSLKSFTDESFTFIAP*KSQAIL
Trigger: GAGAATAGCCTGAGATTTCAAAGGAGCTATAAACGT...GAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTGGAGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp CAAATCAAACCTTTGAAACTGTCCCAAGCCACAGAATaGCCTAAGTTTAGTTCTCCGTTTGAAAGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: QIKPLKLSQATE*PKFSSPFESSS
Trigger: AGAAGAGCTTTCAAACGGAGAACTAAACTTAGGTCATTCTGTGGCTTGGGACAGTTTCAAAGGTTTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR TCA 72 bp CACAATGGACAAGAGGCAACAGTAGTTTGGATAACATaGACGTATGTACATATTGAAAAGCGAGAAGGCATG +
Preference number: 3 (lower is better)
Translates to: HNGQEATVVWIT*TYVHIEKREGM
Trigger: CATGCCTTCTCGCTTTTCAATATGTACATACGTTCATGTTATCCAAACTACTGTTGCCTCTTGTCCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp GAAATCTGCCTTCTCATGAAGCTCAAAGTCGATTGGTaGTACTGTCATACAGCAGTTAATATGAAAAGCTCC +
Preference number: 3 (lower is better)
Translates to: EICLLMKLKVDW*YCHTAVNMKSS
Trigger: GGAGCTTTTCATATTAACTGCTGTATGACAGTATCACCAATCGACTTTGAGCTTCATGAGAAGGCAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR GCA 72 bp GCACACATAAGAAATATCAGTGCTGGGTCCTTTAAATaGTCTGAGAATTCAGTGTCATACCATACCAAATGG +
Preference number: 3 (lower is better)
Translates to: AHIRNISAGSFK*SENSVSYHTKW
Trigger: CCATTTGGTATGGTATGACACTGAATTCTCAGAGCATTTAAAGGACCCAGCACTGATATTTCTTATGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CCA 72 bp CTCAATCATGCTCATCCCTTGATAAGTTCTACTTTCTaGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: LNHAHPLISSTF*TNLGQLHEVVL
Trigger: AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAAGGGATGAGCATGATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR TCA 72 bp GCATCTGATTCATTTCTGTTTTGGAATTTTGAACACTaGGAAGAGTCTGATTCATACACCTCAGTGATGGAA +
Preference number: 3 (lower is better)
Translates to: ASDSFLFWNFEH*EESDSYTSVME
Trigger: TTCCATCACTGAGGTGTATGAATCAGACTCTTCTCAGTGTTCAAAATTCCAAAACAGAAATGAATCAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR TCA 72 bp ACAATGCTTTACTTGGAAAGAATTTGGATTCTCAGATaGTACCTTCCAGGACAGCCACAATATAAACCACAA +
Preference number: 3 (lower is better)
Translates to: TMLYLERIWILR*YLPGQPQYKPQ
Trigger: TTGTGGTTTATATTGTGGCTGTCCTGGAAGGTATCATCTGAGAATCCAAATTCTTTCCAAGTAAAGCATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR-3UTR CAA 90 bp CAGAAACATCGAGAAAGCCAAGACTTAAATTATCTTCTAGGTTTTCCTCTTCTTTTCTGTTTTGGAATTTaGAACACTGAGAAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: QKHRESQDLNYLLGFPLLFCFGI*NTEKSL
Trigger: CAGACTCTTCTCAGTGTTCAAAATTCCAAAACAGAA...AAGAAGAGGAAAACCTAGAAGATAATTTAAGTCTTGGCTTTCTCGATGTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR TCA 72 bp TTTTTGCTTGCCTACAGTCCTTGTCAGAATGGAACGTaGAAGAAGTTATTAGGAATCAAAGGTATTGTTGAA +
Preference number: 3 (lower is better)
Translates to: FLLAYSPCQNGT*KKLLGIKGIVE
Trigger: TTCAACAATACCTTTGATTCCTAATAACTTCTTTCACGTTCCATTCTGACAAGGACTGTAGGCAAGCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp AGCAGAAAGGGAAGCACAACGAGGCTGCTCGGCTTCCCCTTCAGCACAAGGCACAGCCTGTGTGGTACCTaGAGACTGGTGCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SRKGSTTRLLGFPFSTRHSLCGT*RLVPSC
Trigger: GCAGGATGGCACCAGTCTGCAGGTACCACACAGGCT...GTGCCTTGTGCTGAAGGGGAAGCCGAGCAGCCTCGTTGTGCTTCCCTTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 72 bp CTGGGATCTTACTGGGCCACGGGGGTATTACAGAGCTaGAGTCTTCGGCTTGCTGACCAAGCGTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGSYWATGVLQS*SLRLADQAWGL
Trigger: CAAGCCCCACGCTTGGTCAGCAAGCCGAAGACTCAAGCTCTGTAATACCCCCGTGGCCCAGTAAGATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR TCA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGTCTGGCACCCCTCCATaGGACAGTGACTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLSGTPP*DSDCVD
Trigger: ATCCACGCAGTCACTGTCTCATGGAGGGGTGCCAGA...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp CCCGTGACACAGTCGCACTGCAAAGACCACTGGGCAGTTAGTGGGCAAGATGCTCTCCAAAAGCCTGTGTaGTACCTGCAGACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PVTQSHCKDHWAVSGQDALQKPV*YLQTGA
Trigger: GGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAG...AGCATCTTGCCCACTAACTGCCCAGTGGTCTTTGCAGTGCGACTGTGTCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp ATTCCCTCTTTCGGGCAACTAAAGGCTAGCCACCAACTTAGGGACTGCCAGCAGTCCCACCAGCAGCTCTaGCACCCCTCCATGAGACAG +
Preference number: 4 (lower is better)
Translates to: IPSFGQLKASHQLRDCQQSHQQL*HPSMRQ
Trigger: CTGTCTCATGGAGGGGTGCCAGAGCTGCTGGTGGGA...CTGCTGGCAGTCCCTAAGTTGGTGGCTAGCCTTTAGTTGCCCGAAAGAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCGTGACGTCCGAGAGCTaGAAGAGGGCCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPVTSES*KRATWK
Trigger: CTTCCAGGTGGCCCTCTTCCAGCTCTCGGACGTCAC...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp GCCATGGTGCCTGACGTTCCTGCTCTCGAAGGGGGATaGTGGGAGAATGGAAATGGGGCGGTCTTCATAAGA +
Preference number: 4 (lower is better)
Translates to: AMVPDVPALEGG*WENGNGAVFIR
Trigger: TCTTATGAAGACCGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAGAGCAGGAACGTCAGGCACCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR TCA 90 bp TCTCCCAGCAAAGAGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAACAGCGGGACATCTCTTaGCCCACACAGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSKERQQEEAAPHSANQQRDIS*PTQLRR
Trigger: CCTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTG...TTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCTCTTTGCTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TCTCCCAGCAAAGAGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAGTTGGCCACGACGAATaGACGTCTTGCAGCGGGACA +
Preference number: 4 (lower is better)
Translates to: SPSKERQQEEAAPHSANQVGHDE*TSCSGT
Trigger: TGTCCCGCTGCAAGACGTCCATTCGTCGTGGCCAAC...TTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCTCTTTGCTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp TGCTGGCTCTTGCACCAAGGTCTATGGAGTAGGTCTTaGCAGGGAACAGAGCAAGCGTGTTTGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CWLLHQGLWSRS*QGTEQACLTGW
Trigger: CCACCCTGTCAAACACGCTTGCTCTGTTCCCTGCAAAGACCTACTCCATAGACCTTGGTGCAAGAGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR GCA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGGTCTTGTCTCTCGAGTaGTTTCTCTTCCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLVLSLE*FLFPRC
Trigger: GCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGAC...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp AAAACACAACCACCCATTAGCACAGATTGTGACATAACCACTGGTCTCAACCAGTCCCCACTGCTGTTCTaGCCCAGAGCGACCCAGCCG +
Preference number: 4 (lower is better)
Translates to: KTQPPISTDCDITTGLNQSPLLF*PRATQP
Trigger: CGGCTGGGTCGCTCTGGGCCAGAACAGCAGTGGGGA...CTGGTTGAGACCAGTGGTTATGTCACAATCTGTGCTAATGGGTGGTTGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp GCCACGACGAATGGACGTCTTGCAGCGGGACATCTCTaGACCCACACAGTTGAGGAGGAAGAGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: ATTNGRLAAGHL*THTVEEEEFSI
Trigger: TATGGAAAACTCTTCCTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGCAAGACGTCCATTCGTCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 72 bp TCCCTGAATTGGGAGCCTGGAATTCAATGTAGCATGTaGACACCTTGGCAGTGGGTGGAAGAGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: SLNWEPGIQCSM*TPWQWVEEQPS
Trigger: GGATGGCTGCTCTTCCACCCACTGCCAAGGTGTCAACATGCTACATTGAATTCCAGGCTCCCAATTCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp GCACACACCTATAATTCCAGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTCAGCGGGACATCTCTTaGCCCACACAGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AHTYNSSTEGKRSRRIRSQRDIS*PTQLRR
Trigger: CCTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTG...ACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCTGGAATTATAGGTGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp GACCATAAGTCACTTCCCGGTCTTCCCACCTCCCACACAACAACTGCATCATTCGACGAATGGACGTCTTaGAGCGGGACATCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: DHKSLPGLPTSHTTTASFDEWTS*SGTSLD
Trigger: GTCAAGAGATGTCCCGCTGCAAGACGTCCATTCGTC...GAATGATGCAGTTGTTGTGTGGGAGGTGGGAAGACCGGGAAGTGACTTATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp CATAAAGAGAATGGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCGCCATCCTGCTCCTCTaGACTCCACAGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: HKENGVAEDCGLVTPFLSAILLL*TPQRGT
Trigger: AGTTCCTCTCTGTGGAGTCCAGAGGAGCAGGATGGC...GCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp CATAAAGAGAATGGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCCTCCAAAAGCCTGTGTaGTACCTGCAGACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HKENGVAEDCGLVTPFLSLQKPV*YLQTGA
Trigger: GGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAG...GCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAAGGGCTTCGGGGCCCCTaGGATCTTACTGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKGLRGP*DLTGPR
Trigger: CCGTGGCCCAGTAAGATCCCAGGGGCCCCGAAGCCC...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp ATTCCCTCTTTCGGGCAACTAAAGGCTAGCCACCAACTTAGGGACTGCCAGCAGAACAAAGACCCCAATTaGAGACAGGAAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: IPSFGQLKASHQLRDCQQNKDPN*RQEANG
Trigger: GCCATTGGCTTCCTGTCTGCAATTGGGGTCTTTGTT...CTGCTGGCAGTCCCTAAGTTGGTGGCTAGCCTTTAGTTGCCCGAAAGAGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCATCTGGGAGACCCTGTaGTCTCACAATGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPIWETL*SHNGHS
Trigger: ACTGTGACCATTGTGAGAGCACAGGGTCTCCCAGAT...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCTACCCCTCTGTTTCTTaGTGGGCAGCAGCACTATGT +
Preference number: 4 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPYPSVS*WAAALC
Trigger: ACATAGTGCTGCTGCCCAGCAAGAAACAGAGGGGTA...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TCTCCCAGCAAAGAGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAGCGGAGACTCTCCACTaGTCAGATTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SPSKERQQEEAAPHSANQAETLH*SDYFLA
Trigger: AGCCAAGAAGTAATCTGAGCAGTGGAGAGTCTCCGC...TTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCTCTTTGCTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp AACGTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGGCTCCTCCTCCCCACTaGTGTTCTGGCCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: NVYSSFEISGYSPSKERQAPPPH*CSGPER
Trigger: TCGCTCTGGGCCAGAACAGCAGTGGGGAGGAGGAGC...CTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp GTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGTCCCACCAGCAGCTCTaGCACCCCTCCATGAGACAG +
Preference number: 4 (lower is better)
Translates to: VYSSFEISGYSPSKERQQSHQQL*HPSMRQ
Trigger: CTGTCTCATGGAGGGGTGCCAGAGCTGCTGGTGGGA...CTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp GACCATAAGTCACTTCCCGGTCTTCCCACCTCCCACACAACAACTGCATCATTCGCGAGGTTGCGGAAATaGCTGCCTTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: DHKSLPGLPTSHTTTASFARLRK*LPLIIS
Trigger: GGAAATGATCAAAGGCAGCCATTTCCGCAACCTCGC...GAATGATGCAGTTGTTGTGTGGGAGGTGGGAAGACCGGGAAGTGACTTATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp AATTCTTCTAATGTTATAGGAAAAGCAGGGCTTCCTCTGTCCAACAGTTATGCGTCCCCACTGCTGTTCTaGCCCAGAGCGACCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NSSNVIGKAGLPLSNSYASPLLF*PRATQP
Trigger: CGGCTGGGTCGCTCTGGGCCAGAACAGCAGTGGGGA...CGCATAACTGTTGGACAGAGGAAGCCCTGCTTTTCCTATAACATTAGAAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 72 bp AGAGTGAGAAATGGTCCTCTTCAAGAAACAGGGAGCTaGCCTCCTCTGGACTGCCATCGTGGTCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RVRNGPLQETGS*PPLDCHRGPVL
Trigger: AAGAACAGGACCACGATGGCAGTCCAGAGGAGGCAAGCTCCCTGTTTCTTGAAGAGGACCATTTCTCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 72 bp CTGGAAGACAAAGGTCTCTTTATAGACAGGATTGGGTaGGCCACGACGAATGGACGTCTTGCAGCGGGACAT +
Preference number: 4 (lower is better)
Translates to: LEDKGLFIDRIG*ATTNGRLAAGH
Trigger: ATGTCCCGCTGCAAGACGTCCATTCGTCGTGGCCAACCCAATCCTGTCTATAAAGAGACCTTTGTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR GCA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTAGCCTGTGTGGTACCTaGAGACTGGTGCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCSLCGT*RLVPSC
Trigger: GCAGGATGGCACCAGTCTGCAGGTACCACACAGGCT...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp CATAAAGAGAATGGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCATTTCCCCTTCTGGGTaGAAGTGGCTGAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: HKENGVAEDCGLVTPFLSISPSG*KWLRQN
Trigger: GTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAAT...GCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAAGCTCCTCCTCCCCACTaGTGTTCTGGCCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKAPPPH*CSGPER
Trigger: TCGCTCTGGGCCAGAACAGCAGTGGGGAGGAGGAGC...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCTTAACAGTTCCTGTGTaGCCTCCAGTCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPLTVPV*PPVLSL
Trigger: GAGAGACAAGACTGGAGGCCACACAGGAACTGTTAA...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp CATAAAGAGAATGGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCCCCTCTGTTTCTTGCTaGGCAGCAGCACTATGTGAA +
Preference number: 4 (lower is better)
Translates to: HKENGVAEDCGLVTPFLSPSVSC*AAALCE
Trigger: TTCACATAGTGCTGCTGCCCAGCAAGAAACAGAGGG...GCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGGAAGTGAGACACCACAGATaGGCTGAGCGGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: YSSFEISGYSPSKERQQEVRHHR*AERRLS
Trigger: GGAGAGTCTCCGCTCAGCCCATCTGTGGTGTCTCAC...TTCCTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp GATACTTCAGAGGCAGGCACTAATTCAGCTTTCCATTaGAGGACAGTGGGGTGTGGGCTGGGCAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: DTSEAGTNSAFH*RTVGCGLGKSF
Trigger: AAATGACTTGCCCAGCCCACACCCCACTGTCCTCAAATGGAAAGCTGAATTAGTGCCTGCCTCTGAAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
3UTR CAA 72 bp AGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTTaGTCATCCTCAGCTACCCAGGGACCAGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: STEGKRSRRIRS*SSSATQGPEVH
Trigger: ATGAACTTCTGGTCCCTGGGTAGCTGAGGATGACAAACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp CATAAAGAGAATGGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCCTTCTCAGATACTCCTaGACGAAAACTCTGGGATCG +
Preference number: 4 (lower is better)
Translates to: HKENGVAEDCGLVTPFLSLLRYS*TKTLGS
Trigger: CGATCCCAGAGTTTTCGTTCAGGAGTATCTGAGAAG...GCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp GAAGTGGTGGGGCCCTTGCTCAGAGAACCTGGAACGTTAAGCAAGGTGTTAAGGCTCTATATTCAAAGATaGCATCGAGGTCACCGCATT +
Preference number: 4 (lower is better)
Translates to: EVVGPLLREPGTLSKVLRLYIQR*HRGHRI
Trigger: AATGCGGTGACCTCGATGTCATCTTTGAATATAGAG...CCTTAACACCTTGCTTAACGTTCCAGGTTCTCTGAGCAAGGGCCCCACCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATGTTGGCCACGACGAATaGACGTCTTGCAGCGGGACA +
Preference number: 4 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHVGHDE*TSCSGT
Trigger: TGTCCCGCTGCAAGACGTCCATTCGTCGTGGCCAAC...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp CCTATCTCCAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATGAGTCTTTCGTGACGTCCGAGAGCTaGAAGAGGGCCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PISKLFPCSLKSFTDESFVTSES*KRATWK
Trigger: CTTCCAGGTGGCCCTCTTCCAGCTCTCGGACGTCAC...GAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTGGAGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp ACACAGTTTAAAACACAAACAGGGCTTGGGGATAGAGCTCAGTTCTTAGGGTGTCACCGGCAGGTCTGCTaGCCCTTGCTTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: TQFKTQTGLGDRAQFLGCHRQVC*PLLSFI
Trigger: AATGAAGGAAAGCAAGGGCCAGCAGACCTGCCGGTG...ACACCCTAAGAACTGAGCTCTATCCCCAAGCCCTGTTTGTGTTTTAAACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAACACCACAGATGGGCTaGGCGGAGACTCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSTPQMG*AETLHC
Trigger: GCAGTGGAGAGTCTCCGCTCAGCCCATCTGTGGTGT...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp AAAACACAACCACCCATTAGCACAGATTGTGACATAACCACTGGTCTCAACCAGGACGAATGGACGTCTTaGAGCGGGACATCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: KTQPPISTDCDITTGLNQDEWTS*SGTSLD
Trigger: GTCAAGAGATGTCCCGCTGCAAGACGTCCATTCGTC...CTGGTTGAGACCAGTGGTTATGTCACAATCTGTGCTAATGGGTGGTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp GTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGACTTCGGTCCTTATCTaGGAGACCCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: VYSSFEISGYSPSKERQQTSVLI*ETLCSH
Trigger: GTGAGAGCACAGGGTCTCCCAGATAAGGACCGAAGT...CTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTACACCACAGATGGGCTaGGCGGAGACTCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLTPQMG*AETLHC
Trigger: GCAGTGGAGAGTCTCCGCTCAGCCCATCTGTGGTGT...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCATCTGGCACCCCTCCATaGGACAGTGACTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSSGTPP*DSDCVD
Trigger: ATCCACGCAGTCACTGTCTCATGGAGGGGTGCCAGA...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGTACACAGCAAACGTTTaGATTTTATTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLYTANV*ILFSAP
Trigger: TGGAGCAGAAAATAAAATGCAAACGTTTGCTGTGTA...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTGCGGAGACTCTCCACTaGTCAGATTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCAETLH*SDYFLA
Trigger: AGCCAAGAAGTAATCTGAGCAGTGGAGAGTCTCCGC...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AATTCTTCTAATGTTATAGGAAAAGCAGGGCTTCCTCTGTCCAACAGTTATGCGCTCGAAGGGGGATTGTaGGAGAATGGAAATGGGGCG +
Preference number: 4 (lower is better)
Translates to: NSSNVIGKAGLPLSNSYALEGGL*ENGNGA
Trigger: CGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAG...CGCATAACTGTTGGACAGAGGAAGCCCTGCTTTTCCTATAACATTAGAAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp CCTATCTCCAAATTGTTTCCATGCAGCCTCAAGTCATTTACAGATGAGTCTTTCGCCATCCTGCTCCTCTaGACTCCACAGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: PISKLFPCSLKSFTDESFAILLL*TPQRGT
Trigger: AGTTCCTCTCTGTGGAGTCCAGAGGAGCAGGATGGC...GAAAGACTCATCTGTAAATGACTTGAGGCTGCATGGAAACAATTTGGAGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGGTGAGACACCACAGATaGGCTGAGCGGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKVRHHR*AERRLS
Trigger: GGAGAGTCTCCGCTCAGCCCATCTGTGGTGTCTCAC...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAACACCGGCAGGTCTGCTaGCCCTTGCTTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKHRQVC*PLLSFI
Trigger: AATGAAGGAAAGCAAGGGCCAGCAGACCTGCCGGTG...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp GTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGTCTGGACTGCCATCGTaGTCCTGTTCTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: VYSSFEISGYSPSKERQQSGLPS*SCSSSS
Trigger: GGAAGATGAAGAACAGGACCACGATGGCAGTCCAGA...CTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
3UTR CAA 72 bp TCCTGCTCTGGCTTATCACTCAATGCCGAATCGTGTTaGCTAAGAAGGACCAGTGAAGCAGATAATGCATCC +
Preference number: 4 (lower is better)
Translates to: SCSGLSLNAESC*LRRTSEADNAS
Trigger: GGATGCATTATCTGCTTCACTGGTCCTTCTTAGCAAACACGATTCGGCATTGAGTGATAAGCCAGAGCAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR TCA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTGAACTTGCCAAGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCELAKS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCTTGGCAAGTTC...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATGGCAGCAGCACTATGTaGACTTGCCAAGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHGSSTM*TCQELT
Trigger: TGTCAACTCTTGGCAAGTTCACATAGTGCTGCTGCC...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp TTTCTATGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGGAAGCACTGTCACTGTaGGACACCACAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLCSTGKVHSIKMNVVGMEALSL*DTTDGL
Trigger: CAGCCCATCTGTGGTGTCTCACAGTGACAGTGCTTC...CATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGGAAAACAAAGACCCCAATTaGAGACAGGAAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: YSSFEISGYSPSKERQQENKDPN*RQEANG
Trigger: GCCATTGGCTTCCTGTCTGCAATTGGGGTCTTTGTT...TTCCTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATATTTCCCCTTCTGGGTaGAAGTGGCTGAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHISPSG*KWLRQN
Trigger: GTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAAT...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTGTGGGAGAATGGAAATaGGGCGGTCTTCATAAGACA +
Preference number: 4 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCVGEWK*GGLHKT
Trigger: TGTCTTATGAAGACCGCCCCATTTCCATTCTCCCAC...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCACTCGAAGGGGGATTGTaGGAGAATGGAAATGGGGCG +
Preference number: 4 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSLEGGL*ENGNGA
Trigger: CGCCCCATTTCCATTCTCCCACAATCCCCCTTCGAG...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AAAACACAACCACCCATTAGCACAGATTGTGACATAACCACTGGTCTCAACCAGCTTTATAGACAGGATTaGGTTGGCCACGACGAATGG +
Preference number: 4 (lower is better)
Translates to: KTQPPISTDCDITTGLNQLYRQD*VGHDEW
Trigger: CCATTCGTCGTGGCCAACCCAATCCTGTCTATAAAG...CTGGTTGAGACCAGTGGTTATGTCACAATCTGTGCTAATGGGTGGTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp GTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGCTTTATAGACAGGATTaGGTTGGCCACGACGAATGG +
Preference number: 4 (lower is better)
Translates to: VYSSFEISGYSPSKERQQLYRQD*VGHDEW
Trigger: CCATTCGTCGTGGCCAACCCAATCCTGTCTATAAAG...CTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AAAACACAACCACCCATTAGCACAGATTGTGACATAACCACTGGTCTCAACCAGTGGAAGAGGGCCACCTaGAAGACAAAGGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: KTQPPISTDCDITTGLNQWKRAT*KTKVSL
Trigger: TAAAGAGACCTTTGTCTTCCAGGTGGCCCTCTTCCA...CTGGTTGAGACCAGTGGTTATGTCACAATCTGTGCTAATGGGTGGTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp ATTCATAAAGAGAATGGGGTGGCAGAGGATTGCGGATaGGTTACACCCTTCCTTAGCACTCAGCATCTGATT +
Preference number: 4 (lower is better)
Translates to: IHKENGVAEDCG*VTPFLSTQHLI
Trigger: AATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCATTCTCTTTATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp AACGTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGTTCGATCCAAATCATTaGCCTGCCCTTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: NVYSSFEISGYSPSKERQFDPNH*PALACN
Trigger: ATTGCAGGCAAGGGCAGGTCAATGATTTGGATCGAA...CTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp ACGCGTCTTCATAAAGCCGGTGTGTCTCCTACCCTTAGTGATGTTATTTTACAAGAACTTGCCAAGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: TRLHKAGVSPTLSDVILQELAKS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCTTGGCAAGTTC...TTGTAAAATAACATCACTAAGGGTAGGAGACACACCGGCTTTATGAAGACGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAAGGCAGCAGCACTATGTaGACTTGCCAAGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKGSSTM*TCQELT
Trigger: TGTCAACTCTTGGCAAGTTCACATAGTGCTGCTGCC...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp AATTCTTCTAATGTTATAGGAAAAGCAGGGCTTCCTCTGTCCAACAGTTATGCGGTCTTGTCTCTCGAGTaGTTTCTCTTCCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: NSSNVIGKAGLPLSNSYAVLSLE*FLFPRC
Trigger: GCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGAC...CGCATAACTGTTGGACAGAGGAAGCCCTGCTTTTCCTATAACATTAGAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp GACCATAAGTCACTTCCCGGTCTTCCCACCTCCCACACAACAACTGCATCATTCTACACAGCAAACGTTTaGATTTTATTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DHKSLPGLPTSHTTTASFYTANV*ILFSAP
Trigger: TGGAGCAGAAAATAAAATGCAAACGTTTGCTGTGTA...GAATGATGCAGTTGTTGTGTGGGAGGTGGGAAGACCGGGAAGTGACTTATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTAGACTGGTGCCATCCTaGTCCTCTGGACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLRLVPS*SSGLHR
Trigger: TCTGTGGAGTCCAGAGGAGCAGGATGGCACCAGTCT...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp TTTCTATGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGTCAGCAGTTCCTGTGTaGCCTCCAGTCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FLCSTGKVHSIKMNVVGMSAVPV*PPVLSL
Trigger: GAGAGACAAGACTGGAGGCCACACAGGAACTGCTGA...CATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR CCA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAACTTCGGTCCTTATCTaGGAGACCCTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSTSVLI*ETLCSH
Trigger: GTGAGAGCACAGGGTCTCCCAGATAAGGACCGAAGT...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AACGTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGTGGAAGAGGGCCACCTaGAAGACAAAGGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: NVYSSFEISGYSPSKERQWKRAT*KTKVSL
Trigger: TAAAGAGACCTTTGTCTTCCAGGTGGCCCTCTTCCA...CTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp CCTGAACGAAAACTCTGGGATCGGGACACTGAGATCTaGAATTGCTTAGTCACATCTTCATCACTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PERKLWDRDTEI*NCLVTSSSLSE
Trigger: TTCTGAGAGTGATGAAGATGTGACTAAGCAATTCAAGATCTCAGTGTCCCGATCCCAGAGTTTTCGTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 72 bp GCGGTCTTCATAAGACAGAATCTCAGAATAACTAAGTaGGCTGGTTCGATCCAAATCTTCACAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AVFIRQNLRITK*AGSIQIFTSRP
Trigger: GGGTCTGCTTGTGAAGATTTGGATCGAACCAGCCAACTTAGTTATTCTGAGATTCTGTCTTATGAAGACCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
3UTR CAA 72 bp TGTCAGATAATCAAGGCTGACATAACAGGAATGCTGTaGGTAAATCTAGGATTCCAACAGCGTATGCCACCG +
Preference number: 4 (lower is better)
Translates to: CQIIKADITGML*VNLGFQQRMPP
Trigger: CGGTGGCATACGCTGTTGGAATCCTAGATTTACCAACAGCATTCCTGTTATGTCAGCCTTGATTATCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR TCA 90 bp AAAACACAACCACCCATTAGCACAGATTGTGACATAACCACTGGTCTCAACCAGCTCTATATTCAAAGATaGCATCGAGGTCACCGCATT +
Preference number: 4 (lower is better)
Translates to: KTQPPISTDCDITTGLNQLYIQR*HRGHRI
Trigger: AATGCGGTGACCTCGATGTCATCTTTGAATATAGAG...CTGGTTGAGACCAGTGGTTATGTCACAATCTGTGCTAATGGGTGGTTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTGAAGCACTGTCACTGTaGGACACCACAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLEALSL*DTTDGL
Trigger: CAGCCCATCTGTGGTGTCTCACAGTGACAGTGCTTC...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGTGGAAATCATCAAGGTaGCGTCCGAGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKWKSSR*RPRAGR
Trigger: TCTTCCAGCTCTCGGACGTCACCTTGATGATTTCCA...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTAGACTGGTGCCATCCTaGTCCTCTGGACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLRLVPS*SSGLHR
Trigger: TCTGTGGAGTCCAGAGGAGCAGGATGGCACCAGTCT...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAATCTGGGAGACCCTGTaGTCTCACAATGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSIWETL*SHNGHS
Trigger: ACTGTGACCATTGTGAGAGCACAGGGTCTCCCAGAT...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp GTTGCACACATAAGAAATATCAGTGCTGGGTCCTTTAAATGCTCTGAGAATTCATACCCCTCTGTTTCTTaGTGGGCAGCAGCACTATGT +
Preference number: 4 (lower is better)
Translates to: VAHIRNISAGSFKCSENSYPSVS*WAAALC
Trigger: ACATAGTGCTGCTGCCCAGCAAGAAACAGAGGGGTA...TGAATTCTCAGAGCATTTAAAGGACCCAGCACTGATATTTCTTATGTGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp ACGCGTCTTCATAAAGCCGGTGTGTCTCCTACCCTTAGTGATGTTATTTTACAACTCAGAAGATGTGGATaGCTCTTCATCATCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TRLHKAGVSPTLSDVILQLRRCG*LFIIPK
Trigger: TTTGGGGATGATGAAGAGCCATCCACATCTTCTGAG...TTGTAAAATAACATCACTAAGGGTAGGAGACACACCGGCTTTATGAAGACGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp ACACAGTTTAAAACACAAACAGGGCTTGGGGATAGAGCTCAGTTCTTAGGGTGTGTCACAGTGAGCTTCTaGGTTACAGCTCTATATTCA +
Preference number: 4 (lower is better)
Translates to: TQFKTQTGLGDRAQFLGCVTVSF*VTALYS
Trigger: TGAATATAGAGCTGTAACCCAGAAGCTCACTGTGAC...ACACCCTAAGAACTGAGCTCTATCCCCAAGCCCTGTTTGTGTTTTAAACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGGCGAGGTTGCGGAAATaGCTGCCTTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKARLRK*LPLIIS
Trigger: GGAAATGATCAAAGGCAGCCATTTCCGCAACCTCGC...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGGTGGGAGAATGGAAATaGGGCGGTCTTCATAAGACA +
Preference number: 4 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKVGEWK*GGLHKT
Trigger: TGTCTTATGAAGACCGCCCCATTTCCATTCTCCCAC...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTCCCTCTGTTTCTTGCTaGGCAGCAGCACTATGTGAA +
Preference number: 4 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLPSVSC*AAALCE
Trigger: TTCACATAGTGCTGCTGCCCAGCAAGAAACAGAGGG...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp AAATTATCTTCTAGGTTTTCCTCTTCTTCTTTGGGTGCCGATTCGGTAAGAAAGTTTCATTTCCCCTTCTaGGTGCAAGTGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: KLSSRFSSSSLGADSVRKFHFPF*VQVAET
Trigger: TGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAA...CTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGAAAACCTAGAAGATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR TCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTTGGAAATCATCAAGGTaGCGTCCGAGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLWKSSR*RPRAGR
Trigger: TCTTCCAGCTCTCGGACGTCACCTTGATGATTTCCA...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAGCAGCATCTAAGTCCTaGTCTGGCTTATCACTCAAT +
Preference number: 4 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSAASKS*SGLSLN
Trigger: ATTGAGTGATAAGCCAGAGCAGGACTTAGATGCTGC...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TTTCTATGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGGTTTGGACGGAGTCCTaGAGATCACTATTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: FLCSTGKVHSIKMNVVGMVWTES*RSLLES
Trigger: ACTCTCTAATAGTGATCTGCAGGACTCCGTCCAAAC...CATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACATAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp AGAAGACATAAGAAGCCAAGGAAAATCCACGTGGAGAAAATACAAATGGGAAAACACTCTCAGAAGATGTaGATGGCTCTTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: RRHKKPRKIHVEKIQMGKHSQKM*MALHHP
Trigger: GGGATGATGAAGAGCCATCCACATCTTCTGAGAGTG...TTTTCCCATTTGTATTTTCTCCACGTGGATTTTCCTTGGCTTCTTATGTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTGAGAGGAACTGTGGGTaGCATAGGAATCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLERNCG*HRNLQS
Trigger: GCTTTGAAGATTCCTATGCCACCCACAGTTCCTCTC...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR TCA 90 bp CAGAAACATCGAGAAAGCCAAGACTTAAATTATCTTCTAGGTTTTCCTCTTCTTCTTCTCAGATACTCCTaGACGAAAACTCTGGGATCG +
Preference number: 4 (lower is better)
Translates to: QKHRESQDLNYLLGFPLLLLRYS*TKTLGS
Trigger: CGATCCCAGAGTTTTCGTTCAGGAGTATCTGAGAAG...AAGAAGAGGAAAACCTAGAAGATAATTTAAGTCTTGGCTTTCTCGATGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTGAGAGGAACTGTGGGTaGCATAGGAATCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLERNCG*HRNLQS
Trigger: GCTTTGAAGATTCCTATGCCACCCACAGTTCCTCTC...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTTTTCATTTCCCCTTCTaGGTGCAAGTGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLFHFPF*VQVAET
Trigger: TGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAA...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp CACAGAGTAATAACTTTTAAATCCTCTCCCCTTCACAGGAGGAGGAGAAACCATACTGAGATCTTGAATTaGTTAGTCACATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: HRVITFKSSPLHRRRRNHTEILN*LVTSSS
Trigger: TGATGAAGATGTGACTAAGCAATTCAAGATCTCAGT...ATGGTTTCTCCTCCTCCTGTGAAGGGGAGAGGATTTAAAAGTTATTACTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR GCA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTTTGCCTGCAATGCAATaGACTGCAATGAATACCTTC +
Preference number: 4 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLLPAMQ*TAMNTF
Trigger: GAAGGTATTCATTGCAGTGCATTGCATTGCAGGCAA...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTCTCAGAAGATGTGGATaGCTCTTCATCATCCCCAAA +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLLRRCG*LFIIPK
Trigger: TTTGGGGATGATGAAGAGCCATCCACATCTTCTGAG...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp CTATTGCGATGTAATTTACTCAATCATGCTCATCCCTaGATAAGTTCTACTTTCTGGACAAATCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLRCNLLNHAHP*ISSTFWTNLGQ
Trigger: CTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAAGGGATGAGCATGATTGAGTAAATTACATCGCAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp CAGAAACATCGAGAAAGCCAAGACTTAAATTATCTTCTAGGTTTTCCTCTTCTTGTCACAGTGAGCTTCTaGGTTACAGCTCTATATTCA +
Preference number: 4 (lower is better)
Translates to: QKHRESQDLNYLLGFPLLVTVSF*VTALYS
Trigger: TGAATATAGAGCTGTAACCCAGAAGCTCACTGTGAC...AAGAAGAGGAAAACCTAGAAGATAATTTAAGTCTTGGCTTTCTCGATGTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
3UTR CAA 72 bp CTATGCAATTTAAACAATGCTTTACTTGGAAAGAATTaGGATTCTCAGATGATACCTTCCAGGACAGCCACA +
Preference number: 4 (lower is better)
Translates to: LCNLNNALLGKN*DSQMIPSRTAT
Trigger: TGTGGCTGTCCTGGAAGGTATCATCTGAGAATCCAAATTCTTTCCAAGTAAAGCATTGTTTAAATTGCATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTTTAGAGAGTGAGAAATaGTCCTCTTCAAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLLESEK*SSSRNR
Trigger: CCTGTTTCTTGAAGAGGACCATTTCTCACTCTCTAA...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS-3UTR GCA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTCCAAAGCTGTTAACTTaGTTTCTTCCATTAACCTTT +
Preference number: 4 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLPKLLT*FLPLTF
Trigger: AAAGGTTAATGGAAGAAAGCAAGTTAACAGCTTTGG...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp CTCACAGGGAGCAAGGGAAGGAGGGGGAACCCAGAGCAGGTGTGTGTCTGCCTGATAGACAGGATTGGGTaGGCCACGACGAATGGACGT +
Preference number: 5 (lower is better)
Translates to: LTGSKGRRGNPEQVCVCLIDRIG*ATTNGR
Trigger: ACGTCCATTCGTCGTGGCCAACCCAATCCTGTCTAT...CAGGCAGACACACACCTGCTCTGGGTTCCCCCTCCTTCCCTTGCTCCCTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS GCA 90 bp CACTTCTCAGCAGTTCCTGTGTGGCCTCCAGTCTTGTCTCTCGAGTaGTTTCTCTTCCCTCGTTGCTCCGGGTATGGATGCCCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: HFSAVPVWPPVLSLE*FLFPRCSGYGCPLR
Trigger: CCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGGAGGCCACACAGGAACTGCTGAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR CAA 90 bp AGCAGAAAGGGAAGCACAACGAGGCTGCTCGGCTTCCCCTTCAGCACAAGGCACCAGATAATCGCCCTGTaGTGGCATTGTAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: SRKGSTTRLLGFPFSTRHQIIAL*WHCRTV
Trigger: GACTGTCCTACAATGCCACAACAGGGCGATTATCTG...GTGCCTTGTGCTGAAGGGGAAGCCGAGCAGCCTCGTTGTGCTTCCCTTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGCAAGAAACAGGGAGCTaGCCTCCTCTGGACTGCCAT +
Preference number: 5 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLQETGS*PPLDCH
Trigger: ATGGCAGTCCAGAGGAGGCAAGCTCCCTGTTTCTTG...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TCCCCCATCATTCTCTCCCGGGTCATCTTACGGGCAGCATACAGGCGGAAGCGGGAGCATAGCTTCTTGTaGATGAAGAGGAGAAGGACA +
Preference number: 5 (lower is better)
Translates to: SPIILSRVILRAAYRRKREHSFL*MKRRRT
Trigger: TGTCCTTCTCCTCTTCATCAACAAGAAGCTATGCTC...CCGCTTCCGCCTGTATGCTGCCCGTAAGATGACCCGGGAGAGAATGATGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS-3UTR CAA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATAGACAGGATTGGGTaGGCCACGACGAATGGACGT +
Preference number: 5 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLIDRIG*ATTNGR
Trigger: ACGTCCATTCGTCGTGGCCAACCCAATCCTGTCTAT...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS GCA 90 bp GTGTGGCCTCCAGTCTTGTCTCTCGAGTGCTTTCTCTTCCCTCGTTaGTCCGGGTATGGATGCCCTCTTAGGTTTTCAGAGCATAGCTTC +
Preference number: 5 (lower is better)
Translates to: VWPPVLSLECFLFPR*SGYGCPLRFSEHSF
Trigger: GAAGCTATGCTCTGAAAACCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGGAGGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS GCA 90 bp AAGCTGTTAACAGTTCCTGTGTGGCCTCCAGTCTTGTCTCTCGAGTaGTTTCTCTTCCCTCGTTGCTCCGGGTATGGATGCCCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: KLLTVPVWPPVLSLE*FLFPRCSGYGCPLR
Trigger: CCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGGAGGCCACACAGGAACTGTTAACAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp TCTCCCAGCAAAGAGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAGCTCTCGAAGGGGGATaGTGGGAGAATGGAAATGGG +
Preference number: 5 (lower is better)
Translates to: SPSKERQQEEAAPHSANQALEGG*WENGNG
Trigger: CCCATTTCCATTCTCCCACAATCCCCCTTCGAGAGC...TTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCTCTTTGCTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp GGGGTGGCAGAGGATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGCAGCACTATGTGAACTaGCCAAGAGTTGACACCACT +
Preference number: 5 (lower is better)
Translates to: GVAEDCGLVTPFLSTQHLQHYVN*PRVDTT
Trigger: AGTGGTGTCAACTCTTGGCAAGTTCACATAGTGCTG...CAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp GCACACACCTATAATTCCAGCACCGAGGGAAAAAGAAGCAGGAGGATCAGAAGTGCAGCGGGACATCTCTaGACCCACACAGTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: AHTYNSSTEGKRSRRIRSAAGHL*THTVEE
Trigger: CTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGC...ACTTCTGATCCTCCTGCTTCTTTTTCCCTCGGTGCTGGAATTATAGGTGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCGTTCGATCCAAATCATaGACCTGCCCTTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPVRSKS*TCPCLQ
Trigger: TTGCAGGCAAGGGCAGGTCAATGATTTGGATCGAAC...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp GAAGTGGTGGGGCCCTTGCTCAGAGAACCTGGAACGTTAAGCAAGGTGTTAAGGTGCTCAGATTACTTCTaGGCTCCAGAACCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: EVVGPLLREPGTLSKVLRCSDYF*APEPES
Trigger: TGACTCTGGTTCTGGAGCCAAGAAGTAATCTGAGCA...CCTTAACACCTTGCTTAACGTTCCAGGTTCTCTGAGCAAGGGCCCCACCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTCGGTTAGCAGCGAGGTaGCGGAAATGGCTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCRLAAR*RKWLPL
Trigger: CAAAGGCAGCCATTTCCGCAACCTCGCTGCTAACCG...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS GCA 90 bp TTGTCTCTCGAGTGCTTTCTCTTCCCTCGTTGCTCCGGGTATGGATaGCCTCTTAGGTTTTCAGAGCATAGCTTCTTGTTGATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LSLECFLFPRCSGYG*PLRFSEHSFLLMKR
Trigger: CCTCTTCATCAACAAGAAGCTATGCTCTGAAAACCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp AGAGACAGCAGGAAGAAGCTGCACCACATAGTGCGAACCAAAACACAACCACCCTCTGCTCCAACTCTGTaGTCTTTCCCTTCTCAGATA +
Preference number: 5 (lower is better)
Translates to: RDSRKKLHHIVRTKTQPPSAPTL*SFPSQI
Trigger: TATCTGAGAAGGGAAAGACAACAGAGTTGGAGCAGA...GGGTGGTTGTGTTTTGGTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGGAACAGGTCTGCTGGCCCTaGCTTTCCTTCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: YSSFEISGYSPSKERQQEQVCWP*LSFISS
Trigger: GGAGGAAATGAAGGAAAGCAAGGGCCAGCAGACCTG...TTCCTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp AACGTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGGTCTGCTGGCCCTaGCTTTCCTTCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NVYSSFEISGYSPSKERQQVCWP*LSFISS
Trigger: GGAGGAAATGAAGGAAAGCAAGGGCCAGCAGACCTG...CTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp GACCATAAGTCACTTCCCGGTCTTCCCACCTCCCACACAACAACTGCATCATTCGTACACAGCAAACGTTaGCATTTTATTTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DHKSLPGLPTSHTTTASFVHSKR*HFIFCS
Trigger: GGAGCAGAAAATAAAATGCAAACGTTTGCTGTGTAC...GAATGATGCAGTTGTTGTGTGGGAGGTGGGAAGACCGGGAAGTGACTTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp TATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGCAGGAAATCATTGACCTGCCCTaGCCTGCAATGCAATGCACT +
Preference number: 5 (lower is better)
Translates to: YSSFEISGYSPSKERQQEIIDLP*PAMQCT
Trigger: AGTGCATTGCATTGCAGGCAAGGGCAGGTCAATGAT...TTCCTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp AACGTTTATAGCTCCTTTGAAATCTCAGGCTATTCTCCCAGCAAAGAGAGACAGTTACCCCTCTGTTTCTaGCTGGGCAGCAGCACTATG +
Preference number: 5 (lower is better)
Translates to: NVYSSFEISGYSPSKERQLPLCF*LGSSTM
Trigger: CATAGTGCTGCTGCCCAGCAAGAAACAGAGGGGTAA...CTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTATAAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TTTCTATGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCGGTTAGCAGCGAGGTaGCGGAAATGGCTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FLCSTGKVHSIKMNVVGMRLAAR*RKWLPL
Trigger: CAAAGGCAGCCATTTCCGCAACCTCGCTGCTAACCG...CATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS CCA 90 bp CTTGAATTGCTTAGTCACATCTTCATCACTCTCAGAAGATGTGGATaGCTCTTCATCATCCCCAAAGCTGTTAACAGTTCCTGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LELLSHIFITLRRCG*LFIIPKAVNSSCVA
Trigger: GGCCACACAGGAACTGTTAACAGCTTTGGGGATGATGAAGAGCCATCCACATCTTCTGAGAGTGATGAAGATGTGACTAAGCAATTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp TTTCTATGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGGCTCTCGAAGGGGGATaGTGGGAGAATGGAAATGGG +
Preference number: 5 (lower is better)
Translates to: FLCSTGKVHSIKMNVVGMALEGG*WENGNG
Trigger: CCCATTTCCATTCTCCCACAATCCCCCTTCGAGAGC...CATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACATAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTTGCTCAGATTACTTCTaGGCTCCAGAACCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCCSDYF*APEPES
Trigger: TGACTCTGGTTCTGGAGCCAAGAAGTAATCTGAGCA...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAACAGATAATCGCCCTGTaGTGGCATTGTAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKQIIAL*WHCRTV
Trigger: GACTGTCCTACAATGCCACAACAGGGCGATTATCTG...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp CAGAAACATCGAGAAAGCCAAGACTTAAATTATCTTCTAGGTTTTCCTCTTCTTGCAGCGGGACATCTCTaGACCCACACAGTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: QKHRESQDLNYLLGFPLLAAGHL*THTVEE
Trigger: CTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGC...AAGAAGAGGAAAACCTAGAAGATAATTTAAGTCTTGGCTTTCTCGATGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp GATTGCGGATTGGTTACACCCTTCCTTAGCACTCAGCATCTGATTCATTTCTGTCTCAGAATAACTAAGTaGGCTGGTTCGATCCAAATC +
Preference number: 5 (lower is better)
Translates to: DCGLVTPFLSTQHLIHFCLRITK*AGSIQI
Trigger: GATTTGGATCGAACCAGCCAACTTAGTTATTCTGAG...ACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TGTTCTACTGGCAAGGTACATAGCATAAAGATGAATGTGGTTGGCATGCAGAAACAGCACTATGTGAACTaGCCAAGAGTTGACACCACT +
Preference number: 5 (lower is better)
Translates to: CSTGKVHSIKMNVVGMQKQHYVN*PRVDTT
Trigger: AGTGGTGTCAACTCTTGGCAAGTTCACATAGTGCTG...TTTCTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TGCCCATACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCATCTGCTCCAACTCTGTaGTCTTTCCCTTCTCAGATA +
Preference number: 5 (lower is better)
Translates to: CPYCVCRLPFMTTFKLKSSAPTL*SFPSQI
Trigger: TATCTGAGAAGGGAAAGACAACAGAGTTGGAGCAGA...TGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTATGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000221220.2
ENSMUST00000238790.2
CDS-3UTR CAA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTGAGCATAGCTTCTTGTaGATGAAGAGGAGAAGGACA +
Preference number: 5 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLEHSFL*MKRRRT
Trigger: TGTCCTTCTCCTCTTCATCAACAAGAAGCTATGCTC...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp TTGATAAGTTCTACTTTCTGGACAAATCTAGGCCAGCTTCATGAAGTAGTTCTTCTCAGAATAACTAAGTaGGCTGGTTCGATCCAAATC +
Preference number: 5 (lower is better)
Translates to: LISSTFWTNLGQLHEVVLLRITK*AGSIQI
Trigger: GATTTGGATCGAACCAGCCAACTTAGTTATTCTGAG...AAGAACTACTTCATGAAGCTGGCCTAGATTTGTCCAGAAAGTAGAACTTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS-3UTR CAA 90 bp TACTGCGTATGTAGGCTTCCTTTCATGACAACATTTAAACTCAAATCAAACCTTCCCAAAGCTGTTAACTaGCTTTCTTCCATTAACCTT +
Preference number: 5 (lower is better)
Translates to: YCVCRLPFMTTFKLKSNLPKAVN*LSSINL
Trigger: AAGGTTAATGGAAGAAAGCAAGTTAACAGCTTTGGG...AAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238790.2
CDS CAA 72 bp CAACACTTCTCAGCAGTTCCTGTGTGGCCTCCAGTCTaGTCTCTCGAGTGCTTTCTCTTCCCTCGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: QHFSAVPVWPPV*SLECFLFPRCS
Trigger: GGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGGAGGCCACACAGGAACTGCTGAGAAGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110451.4
CDS GCA 72 bp CCAGTCTTGTCTCTCGAGTGCTTTCTCTTCCCTCGTTaGTCCGGGTATGGATGCCCTCTTAGGTTTTCAGAG +
Preference number: 6 (lower is better)
Translates to: PVLSLECFLFPR*SGYGCPLRFSE
Trigger: CTCTGAAAACCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS CAA 72 bp CCAAAGCTGTTAACAGTTCCTGTGTGGCCTCCAGTCTaGTCTCTCGAGTGCTTTCTCTTCCCTCGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: PKLLTVPVWPPV*SLECFLFPRCS
Trigger: GGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGGAGGCCACACAGGAACTGTTAACAGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS CAA 90 bp TCATCATCCCCAAAGCTGTTAACAGTTCCTGTGTGGCCTCCAGTCTaGTCTCTCGAGTGCTTTCTCTTCCCTCGTTGCTCCGGGTATGGA +
Preference number: 6 (lower is better)
Translates to: SSSPKLLTVPVWPPV*SLECFLFPRCSGYG
Trigger: TCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTCGAGAGACAAGACTGGAGGCCACACAGGAACTGTTAACAGCTTTGGGGATGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS TCA 72 bp TTGACCTGCCCTTGCCTGCAATGCAATGCACTGCAATaGATACCTTCACAAGCAGACCCTTCAGCGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LTCPCLQCNALQ*IPSQADPSALS
Trigger: AGACAGCGCTGAAGGGTCTGCTTGTGAAGGTATTCATTGCAGTGCATTGCATTGCAGGCAAGGGCAGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS GCA 72 bp GAGTGCTTTCTCTTCCCTCGTTGCTCCGGGTATGGATaGCCTCTTAGGTTTTCAGAGCATAGCTTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: ECFLFPRCSGYG*PLRFSEHSFLL
Trigger: CAACAAGAAGCTATGCTCTGAAAACCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGAAAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS CAA 90 bp TGCTCCGGGTATGGATGCCCTCTTAGGTTTTCAGAGCATAGCTTCTaGTTGATGAAGAGGAGAAGGACAGCCAGAAGGACAACAAAGACC +
Preference number: 6 (lower is better)
Translates to: CSGYGCPLRFSEHSF*LMKRRRTARRTTKT
Trigger: GGTCTTTGTTGTCCTTCTGGCTGTCCTTCTCCTCTTCATCAACAAGAAGCTATGCTCTGAAAACCTAAGAGGGCATCCATACCCGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110451.4
ENSMUST00000221220.2
CDS CCA 72 bp CCTTCACAAGCAGACCCTTCAGCGCTGTCTTCCTGGTaGGTACACAGCAAACGTTTGCATTTTATTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PSQADPSALSSW*VHSKRLHFIFC
Trigger: GCAGAAAATAAAATGCAAACGTTTGCTGTGTACCCACCAGGAAGACAGCGCTGAAGGGTCTGCTTGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS CAA 90 bp GGAAATGGGGCGGTCTTCATAAGACAGAATCTCAGAATAACTAAGTaGGCTGGTTCGATCCAAATCATTGACCTGCCCTTGCCTGCAATG +
Preference number: 6 (lower is better)
Translates to: GNGAVFIRQNLRITK*AGSIQIIDLPLPAM
Trigger: CATTGCAGGCAAGGGCAGGTCAATGATTTGGATCGAACCAGCCAACTTAGTTATTCTGAGATTCTGTCTTATGAAGACCGCCCCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS GCA 72 bp ATCCAAATCATTGACCTGCCCTTGCCTGCAATGCAATaGACTGCAATGAATACCTTCACAAGCAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: IQIIDLPLPAMQ*TAMNTFTSRPF
Trigger: GAAGGGTCTGCTTGTGAAGGTATTCATTGCAGTGCATTGCATTGCAGGCAAGGGCAGGTCAATGATTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS CCA 72 bp ATACCTTCACAAGCAGACCCTTCAGCGCTGTCTTCCTaGTGGGTACACAGCAAACGTTTGCATTTTATTTTC +
Preference number: 6 (lower is better)
Translates to: IPSQADPSALSS*WVHSKRLHFIF
Trigger: GAAAATAAAATGCAAACGTTTGCTGTGTACCCACCAGGAAGACAGCGCTGAAGGGTCTGCTTGTGAAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS CAA 90 bp AGAATAACTAAGTTGGCTGGTTCGATCCAAATCATTGACCTGCCCTaGCCTGCAATGCAATGCACTGCAATGAATACCTTCACAAGCAGA +
Preference number: 6 (lower is better)
Translates to: RITKLAGSIQIIDLP*PAMQCTAMNTFTSR
Trigger: TCTGCTTGTGAAGGTATTCATTGCAGTGCATTGCATTGCAGGCAAGGGCAGGTCAATGATTTGGATCGAACCAGCCAACTTAGTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS CCA 72 bp CTTAGTCACATCTTCATCACTCTCAGAAGATGTGGATaGCTCTTCATCATCCCCAAAGCTGTTAACAGTTCC +
Preference number: 6 (lower is better)
Translates to: LSHIFITLRRCG*LFIIPKAVNSS
Trigger: GGAACTGTTAACAGCTTTGGGGATGATGAAGAGCCATCCACATCTTCTGAGAGTGATGAAGATGTGACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2
CDS CAA 72 bp GCGGTCTTCATAAGACAGAATCTCAGAATAACTAAGTaGGCTGGTTCGATCCAAATCATTGACCTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: AVFIRQNLRITK*AGSIQIIDLPL
Trigger: CAAGGGCAGGTCAATGATTTGGATCGAACCAGCCAACTTAGTTATTCTGAGATTCTGTCTTATGAAGACCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221220.2