Pregenerated sensors for SYT15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041479Ensembl transcript IDs: ENSMUST00000035351.7, ENSMUST00000119693.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCTGCGTGCATCCTCTCCTGTTGAGGCCAGACAAGACAGCCCAGTaGGAGGAAAGGGACCAAAAGGCAGGCAACAGAGTCAGAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: VCVHPLLLRPDKTAQ*EERDQKAGNRVRDS Trigger: GCTGTCTCTGACTCTGTTGCCTGCCTTTTGGTCCCTTTCCTCCCACTGGGCTGTCTTGTCTGGCCTCAACAGGAGAGGATGCACGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR TCA 90 bp | CCTGGCATATCAAGTTGTAGCAGGTCTGCGTGCATCCTCTCCTGTTaGGGCCAGACAAGACAGCCCAGTGGGAGGAAAGGGACCAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: PGISSCSRSACILSC*GQTRQPSGRKGTKR Trigger: CCTTTTGGTCCCTTTCCTCCCACTGGGCTGTCTTGTCTGGCCTCAACAGGAGAGGATGCACGCAGACCTGCTACAACTTGATATGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 90 bp | GTGGACTCAACCCACCACCAGCTTTCCAAGGTGGCGAGACTTAGCTaGTGCTGTGCTCCCATTCATGTGCAGCTGTGCTCCACCAAACAT | + |
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Preference number: 1 (lower is better) Translates to: VDSTHHQLSKVARLS*CCAPIHVQLCSTKH Trigger: ATGTTTGGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCACCTTGGAAAGCTGGTGGTGGGTTGAGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 90 bp | GCCCCTGCGAGCTCACACTGGCCCACGAAAACCTGCATGCCTCTTTaGCATTCTAAGTCTACACATGTCCCTACAATATGGCTGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: APASSHWPTKTCMPL*HSKSTHVPTIWLLL Trigger: GAGGAGCAGCCATATTGTAGGGACATGTGTAGACTTAGAATGGCAAAGAGGCATGCAGGTTTTCGTGGGCCAGTGTGAGCTCGCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 90 bp | AAAACAGTGCAGCAGTGGACTCAACCCACCACCAGCTTTCCAAGGTaGCGAGACTTAGCTGGTGCTGTGCTCCCATTCATGTGCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: KTVQQWTQPTTSFPR*RDLAGAVLPFMCSC Trigger: ACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCACCTTGGAAAGCTGGTGGTGGGTTGAGTCCACTGCTGCACTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 90 bp | CTGCTCAGTAGGGCTCTCCCTGTAGTGGCCCACAGTTCACTCTACTaGGTGGAAGACAGAATGCCCAGCTTGAAAAACAGTGCAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LLSRALPVVAHSSLY*VEDRMPSLKNSAAV Trigger: CACTGCTGCACTGTTTTTCAAGCTGGGCATTCTGTCTTCCACCCAGTAGAGTGAACTGTGGGCCACTACAGGGAGAGCCCTACTGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR TCA 90 bp | TGGCCCACAGTTCACTCTACTGGGTGGAAGACAGAATGCCCAGCTTaGAAAACAGTGCAGCAGTGGACTCAACCCACCACCAGCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: WPTVHSTGWKTECPA*KTVQQWTQPTTSFP Trigger: TGGAAAGCTGGTGGTGGGTTGAGTCCACTGCTGCACTGTTTTTCAAGCTGGGCATTCTGTCTTCCACCCAGTAGAGTGAACTGTGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 90 bp | TTCACTCTACTGGGTGGAAGACAGAATGCCCAGCTTGAAAAACAGTaGAGCAGTGGACTCAACCCACCACCAGCTTTCCAAGGTGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: FTLLGGRQNAQLEKQ*SSGLNPPPAFQGGE Trigger: CTCGCCACCTTGGAAAGCTGGTGGTGGGTTGAGTCCACTGCTGCACTGTTTTTCAAGCTGGGCATTCTGTCTTCCACCCAGTAGAGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 90 bp | TCTTCTAGAGTCACAGGATCTGAGACAGCCCCTGCGAGCTCACACTaGCCCACGAAAACCTGCATGCCTCTTTGCCATTCTAAGTCTACA | + |
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Preference number: 1 (lower is better) Translates to: SSRVTGSETAPASSH*PTKTCMPLCHSKST Trigger: TGTAGACTTAGAATGGCAAAGAGGCATGCAGGTTTTCGTGGGCCAGTGTGAGCTCGCAGGGGCTGTCTCAGATCCTGTGACTCTAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 90 bp | AGGGACCAAAAGGCAGGCAACAGAGTCAGAGACAGCACCTGCCCCTaGTGTCCACTTAAGGACCCAGTTACACAGCTATACCATATCATA | + |
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Preference number: 1 (lower is better) Translates to: RDQKAGNRVRDSTCP*CPLKDPVTQLYHII Trigger: TATGATATGGTATAGCTGTGTAACTGGGTCCTTAAGTGGACAGCAGGGGCAGGTGCTGTCTCTGACTCTGTTGCCTGCCTTTTGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 90 bp | GTGGCGAGACTTAGCTGGTGCTGTGCTCCCATTCATGTGCAGCTGTaGTCCACCAAACATATCAGTTCTCAATCTCTGAGATCCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: VARLSWCCAPIHVQL*STKHISSQSLRSCL Trigger: CAAACAGGATCTCAGAGATTGAGAACTGATATGTTTGGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 90 bp | TGGCATCCTGAAGAGGATGGCTGTGCTCAAGATGTCATGCAAATTTaGCTGCATTGGGTTATATGGCTCCAGGGAGTAGATATGTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: WHPEEDGCAQDVMQI*LHWVIWLQGVDMWQ Trigger: TTGCCACATATCTACTCCCTGGAGCCATATAACCCAATGCAGCCAAATTTGCATGACATCTTGAGCACAGCCATCCTCTTCAGGATGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 90 bp | ATAAGATGGTGTGTTCTTTTGGACCAGTCAGGCAGAACTGATATTTaGGTACTGATAGCCATTAGAAGTGGACCTAAAGAGGCACAGATA | + |
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Preference number: 1 (lower is better) Translates to: IRWCVLLDQSGRTDI*VLIAIRSGPKEAQI Trigger: TATCTGTGCCTCTTTAGGTCCACTTCTAATGGCTATCAGTACGCAAATATCAGTTCTGCCTGACTGGTCCAAAAGAACACACCATCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTAGCTATTGGAAGCCACTGCAGTGTGAGTCACTCTaGAAGTATGTACATGAAGTAAGAGAGAAAGAAACAAATAAGATG | + |
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Preference number: 1 (lower is better) Translates to: VCVCSYWKPLQCESL*KYVHEVREKETNKM Trigger: CATCTTATTTGTTTCTTTCTCTCTTACTTCATGTACATACTTTCAGAGTGACTCACACTGCAGTGGCTTCCAATAGCTACACACACACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR TCA 90 bp | TTGACCTCCTGGTATGTGGTTGGGCTGCTCAGTAGGGCTCTCCCTGTAGTGGCCTTTCCTTCCTGCACATaGACACCCATGAGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LTSWYVVGLLSRALPVVAFPSCT*TPMSSG Trigger: GCCTGAGCTCATGGGTGTTCATGTGCAGGAAGGAAA...GGCCACTACAGGGAGAGCCCTACTGAGCAGCCCAACCACATACCAGGAGGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGATGTACCAGTCCGCCAACTTTCCCTGGTCATCCAGGGAAAAACCACTGTCCGGAGGGGTTAGGTaGGTTGGGAGAGGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: CQMYQSANFPWSSREKPLSGGVR*VGRGSW Trigger: CCAGGAGCCTCTCCCAACCCACCTAACCCCTCCGGA...CAGTGGTTTTTCCCTGGATGACCAGGGAAAGTTGGCGGACTGGTACATCTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CAA 90 bp | GATGGGTTGTGCAGGACCACTGGCAAGGATAACCCATCCAGGACCTaGAACAGCCATCTCGGAAGGCACGAGGAAAGGCAGAGAACACAA | + |
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Preference number: 2 (lower is better) Translates to: DGLCRTTGKDNPSRT*NSHLGRHEERQRTQ Trigger: TTGTGTTCTCTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATCCTTGCCAGTGGTCCTGCACAACCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCAGAGGCCTGGCACATGAACACCCATaGGCTCAGGCTAGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: PQSTLPADFLPLQFLRGLAHEHP*AQASPT Trigger: TGTGGGGCTAGCCTGAGCTCATGGGTGTTCATGTGC...CAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | CCCTACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATGTTCACTCTACTGGGTaGAAGACAGAATGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PYNMAAPPVTPQSTLPADVHSTG*KTECPA Trigger: AGCTGGGCATTCTGTCTTCCACCCAGTAGAGTGAAC...ATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | CACGGAAGCCTGGCATATCAAGTTGTAGCAGGTCTGCGTGCATCCTCTCCTGTTCACAGTTCACTCTACTaGGTGGAAGACAGAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: HGSLAYQVVAGLRASSPVHSSLY*VEDRMP Trigger: GGGCATTCTGTCTTCCACCCAGTAGAGTGAACTGTG...AACAGGAGAGGATGCACGCAGACCTGCTACAACTTGATATGCCAGGCTTCCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR TCA 90 bp | CACGGAAGCCTGGCATATCAAGTTGTAGCAGGTCTGCGTGCATCCTCTCCTGTTGAGCACACTGCCTGCTaGTTTCTTGCCATTACAGTT | + |
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Preference number: 2 (lower is better) Translates to: HGSLAYQVVAGLRASSPVEHTAC*FLAITV Trigger: AACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTC...AACAGGAGAGGATGCACGCAGACCTGCTACAACTTGATATGCCAGGCTTCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGCACCTGCCCCTGCTGTCCACTTAAGGACCCAGTTACACAGCTATACCTTGTGCACAATACCATaGTCCCATGGATTCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: ETAPAPAVHLRTQLHSYTLCTIP*SHGFTC Trigger: ACAGGTGAATCCATGGGACCATGGTATTGTGCACAA...GGTATAGCTGTGTAACTGGGTCCTTAAGTGGACAGCAGGGGCAGGTGCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CAA 90 bp | ACATATCAGTTCTCAATCTCTGAGATCCTGTTTGAGGTCATGACCTaGATGATCAGGAGCCCTGCAGATCCGGAGGGGTTAGGTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: TYQFSISEILFEVMT*MIRSPADPEGLGGL Trigger: CAACCCACCTAACCCCTCCGGATCTGCAGGGCTCCTGATCATCAAGGTCATGACCTCAAACAGGATCTCAGAGATTGAGAACTGATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR TCA 90 bp | TACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCGAAGCCACTGCAGTGTaGGTCACTCTGAAAGTATGT | + |
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Preference number: 2 (lower is better) Translates to: YNMAAPPVTPQSTLPADFEATAV*VTLKVC Trigger: ACATACTTTCAGAGTGACTCACACTGCAGTGGCTTC...GAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCTGGTGCTGTGCTCCCATTCATGTGCAGCTGTGCTCCACCAAACATATCCTCCTGGTCAGATACTaGCTGAAACTGGGTTGTATC | + |
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Preference number: 2 (lower is better) Translates to: LSWCCAPIHVQLCSTKHILLVRY*LKLGCI Trigger: GATACAACCCAGTTTCAGCCAGTATCTGACCAGGAG...GATATGTTTGGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | GGTACAGACACACAGAGAAATAACAGGCACAGTGGCTGCTCACTAGATCAACTAAGAGATCACCTGGAGTaGGGCTTGAGGTGTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: GTDTQRNNRHSGCSLDQLRDHLE*GLRCGI Trigger: GATGCCACACCTCAAGCCCCACTCCAGGTGATCTCT...TAGTTGATCTAGTGAGCAGCCACTGTGCCTGTTATTTCTCTGTGTGTCTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGCGTGTCCCAGCCTCTCTaGGAGCTAGTTTCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: QETNCLTSLTIHPERGRSVSQPL*ELVSLI Trigger: GATTAAAGAAACTAGCTCTCAGAGAGGCTGGGACAC...GCTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCATCTTGTCTGCCTGTCTaGAGCTTAGGGTACAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LSLLRAHCLLISCHYSFSSCLPV*SLGYRH Trigger: GTGTCTGTACCCTAAGCTGCAGACAGGCAGACAAGA...TGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR GCA 90 bp | CACGGAAGCCTGGCATATCAAGTTGTAGCAGGTCTGCGTGCATCCTCTCCTGTTTGCCTGCTGATTTCTTaGCATTACAGTTTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HGSLAYQVVAGLRASSPVCLLIS*HYSFSE Trigger: CTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCA...AACAGGAGAGGATGCACGCAGACCTGCTACAACTTGATATGCCAGGCTTCCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR TCA 90 bp | CACGGAAGCCTGGCATATCAAGTTGTAGCAGGTCTGCGTGCATCCTCTCCTGTTTGGGCCCAACTTAGTTaGTTCTGTAAGTTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: HGSLAYQVVAGLRASSPVWAQLS*FCKFSC Trigger: ACAAGAAAACTTACAGAATCAACTAAGTTGGGCCCA...AACAGGAGAGGATGCACGCAGACCTGCTACAACTTGATATGCCAGGCTTCCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCACTGCATTGGGTTATATaGCTCCAGGGAGTAGATATG | + |
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Preference number: 2 (lower is better) Translates to: LSLLRAHCLLISCHYSFSLHWVI*LQGVDM Trigger: CATATCTACTCCCTGGAGCCATATAACCCAATGCAG...TGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCACAAATTTGGCTGCATTaGGTTATATGGCTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSLLRAHCLLISCHYSFSQIWLH*VIWLQG Trigger: TCCCTGGAGCCATATAACCCAATGCAGCCAAATTTG...TGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACAAATAAGATGGTGTGTTCTTTTGGACCAGTCAGGCAGAACTGATATTCCCACAGTGCACCACTaGATGTTAGAGATGTCCACG | + |
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Preference number: 2 (lower is better) Translates to: KKQIRWCVLLDQSGRTDIPTVHH*MLEMST Trigger: CGTGGACATCTCTAACATTCAGTGGTGCACTGTGGG...AATATCAGTTCTGCCTGACTGGTCCAAAAGAACACACCATCTTATTTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CAA 90 bp | CCCTACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATGAGGGGTTAGGTGGGTaGGGAGAGGCTCCTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: PYNMAAPPVTPQSTLPADEGLGG*GEAPGQ Trigger: CTGACCAGGAGCCTCTCCCAACCCACCTAACCCCTC...ATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 72 bp | CACCACCAGCTTTCCAAGGTGGCGAGACTTAGCTGGTaGTGTGCTCCCATTCATGTGCAGCTGTGCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: HHQLSKVARLSW*CAPIHVQLCST Trigger: GGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCACCTTGGAAAGCTGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 72 bp | ACCCACCACCAGCTTTCCAAGGTGGCGAGACTTAGCTaGTGCTGTGCTCCCATTCATGTGCAGCTGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: THHQLSKVARLS*CCAPIHVQLCS Trigger: GGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCACCTTGGAAAGCTGGTGGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR TCA 72 bp | GCAGGACCACTGGCAAGGATAACCCATCCAGGACCTTaGACAGCCATCTCGGAAGGCACGAGGAAAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: AGPLARITHPGP*TAISEGTRKGR Trigger: TCTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATCCTTGCCAGTGGTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
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| 3UTR CCA 72 bp | CAGCAGTGGACTCAACCCACCACCAGCTTTCCAAGGTaGCGAGACTTAGCTGGTGCTGTGCTCCCATTCATG | + |
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Preference number: 3 (lower is better) Translates to: QQWTQPTTSFPR*RDLAGAVLPFM Trigger: CATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCACCTTGGAAAGCTGGTGGTGGGTTGAGTCCACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 72 bp | GTCACAGGATCTGAGACAGCCCCTGCGAGCTCACACTaGCCCACGAAAACCTGCATGCCTCTTTGCCATTCT | + |
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Preference number: 3 (lower is better) Translates to: VTGSETAPASSH*PTKTCMPLCHS Trigger: AGAATGGCAAAGAGGCATGCAGGTTTTCGTGGGCCAGTGTGAGCTCGCAGGGGCTGTCTCAGATCCTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CAA 90 bp | TTGACCTCCTGGTATGTGGTTGGGCTGCTCAGTAGGGCTCTCCCTGTAGTGGCCCTGGCTGAAACTGGGTaGTATCCCTTTTCCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LTSWYVVGLLSRALPVVALAETG*YPFSFL Trigger: CAGGAAGGAAAAGGGATACAACCCAGTTTCAGCCAG...GGCCACTACAGGGAGAGCCCTACTGAGCAGCCCAACCACATACCAGGAGGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 72 bp | GACCAAAAGGCAGGCAACAGAGTCAGAGACAGCACCTaGCCCTGCTGTCCACTTAAGGACCCAGTTACACAG | + |
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Preference number: 3 (lower is better) Translates to: DQKAGNRVRDST*PCCPLKDPVTQ Trigger: CTGTGTAACTGGGTCCTTAAGTGGACAGCAGGGGCAGGTGCTGTCTCTGACTCTGTTGCCTGCCTTTTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 72 bp | CCAGGGAAAAACCACTGCAAATCACGAGTCTCACGCTaGACTATGAGTGTGGTGGCATCCATGGCCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PGKNHCKSRVSR*TMSVVASMASR Trigger: CCTGGAGGCCATGGATGCCACCACACTCATAGTCCAGCGTGAGACTCGTGATTTGCAGTGGTTTTTCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 72 bp | ACAGCCCCTGCGAGCTCACACTGGCCCACGAAAACCTaGATGCCTCTTTGCCATTCTAAGTCTACACATGTC | + |
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Preference number: 3 (lower is better) Translates to: TAPASSHWPTKT*MPLCHSKSTHV Trigger: GACATGTGTAGACTTAGAATGGCAAAGAGGCATGCAGGTTTTCGTGGGCCAGTGTGAGCTCGCAGGGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR-3UTR CAA 90 bp | CCCTACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATGACAGAATGCCCAGCTaGAAAAACAGTGCAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PYNMAAPPVTPQSTLPADDRMPS*KNSAAV Trigger: CACTGCTGCACTGTTTTTCAAGCTGGGCATTCTGTC...ATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR TCA 72 bp | AGGTGGGTTGGGAGAGGCTCCTGGTCAGATACTGGCTaGAACTGGGTTGTATCCCTTTTCCTTCCTGCACAT | + |
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Preference number: 3 (lower is better) Translates to: RWVGRGSWSDTG*NWVVSLFLPAH Trigger: ATGTGCAGGAAGGAAAAGGGATACAACCCAGTTTCAGCCAGTATCTGACCAGGAGCCTCTCCCAACCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 72 bp | CTGGGTGGAAGACAGAATGCCCAGCTTGAAAAACAGTaGAGCAGTGGACTCAACCCACCACCAGCTTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LGGRQNAQLEKQ*SSGLNPPPAFQ Trigger: TTGGAAAGCTGGTGGTGGGTTGAGTCCACTGCTGCACTGTTTTTCAAGCTGGGCATTCTGTCTTCCACCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR GCA 72 bp | CCGCCAACTTTCCCTGGTCATCCAGGGAAAAACCACTaGAAATCACGAGTCTCACGCTGGACTATGAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PPTFPGHPGKNH*KSRVSRWTMSV Trigger: CACACTCATAGTCCAGCGTGAGACTCGTGATTTGCAGTGGTTTTTCCCTGGATGACCAGGGAAAGTTGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| 3UTR CCA 72 bp | AGGGCTCTCCCTGTAGTGGCCCACAGTTCACTCTACTaGGTGGAAGACAGAATGCCCAGCTTGAAAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RALPVVAHSSLY*VEDRMPSLKNS Trigger: ACTGTTTTTCAAGCTGGGCATTCTGTCTTCCACCCAGTAGAGTGAACTGTGGGCCACTACAGGGAGAGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCAGAGGCCTGGCAAATTTGGCTGCATaGGGTTATATGGCTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQSTLPADFLPLQFLRGLANLAA*GYMAPG Trigger: CCCTGGAGCCATATAACCCAATGCAGCCAAATTTGC...CAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR TCA 72 bp | TTCACCCTCTGTGAGCCCTTATGGGCCCAACTTAGTTaGTTCTGTAAGTTTTCTTGTCGTGCCCTTGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: FTLCEPLWAQLS*FCKFSCRALDP Trigger: GGGGTCAAGGGCACGACAAGAAAACTTACAGAATCAACTAAGTTGGGCCCATAAGGGCTCACAGAGGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR GCA 72 bp | TGGCGAGACTTAGCTGGTGCTGTGCTCCCATTCATGTaGAGCTGTGCTCCACCAAACATATCAGTTCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: WRDLAGAVLPFM*SCAPPNISVLN Trigger: ATTGAGAACTGATATGTTTGGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAGTCTCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR GCA 72 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTaGCATTACAGTTTCTCAGAGGCCTGTCAGATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLLRAHCLLIS*HYSFSEACQMY Trigger: GTACATCTGACAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR GCA 72 bp | ATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTaGCTGCTGATTTCTTGCCATTACAGTTTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IWLLLLSLLRAH*LLISCHYSFSE Trigger: CTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR CCA 72 bp | CTTTGCCATTCTAAGTCTACACATGTCCCTACAATATaGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LCHSKSTHVPTI*LLLLSLLRAHC Trigger: GCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTAGGGACATGTGTAGACTTAGAATGGCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR GCA 72 bp | AGGCAGAGAACACAATACTCACGACAGGAAACCAACTaGCTGACATCTCTGACAATTCACCCAGAACGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RQRTQYSRQETN*LTSLTIHPERG Trigger: TCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGTCGTGAGTATTGTGTTCTCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| 3UTR CCA 72 bp | GATACAGGCAGGGAGTTCAGCTTTAAGTATAGTGCATaGTCTTGTCTGCCTGTCTGCAGCTTAGGGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DTGREFSFKYSA*SCLPVCSLGYR Trigger: TCTGTACCCTAAGCTGCAGACAGGCAGACAAGACCATGCACTATACTTAAAGCTGAACTCCCTGCCTGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR CCA 72 bp | GAAGAGGATGGCTGTGCTCAAGATGTCATGCAAATTTaGCTGCATTGGGTTATATGGCTCCAGGGAGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EEDGCAQDVMQI*LHWVIWLQGVD Trigger: ATCTACTCCCTGGAGCCATATAACCCAATGCAGCCAAATTTGCATGACATCTTGAGCACAGCCATCCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTAGCTATTGGAAGCCACTaGAGTGTGAGTCACTCTGAAAGTATGTACATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVAIGSH*SVSHSESMYMK Trigger: CTTCATGTACATACTTTCAGAGTGACTCACACTGCAGTGGCTTCCAATAGCTACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR TCA 72 bp | GCATTTGGTGACAGCGACTTTGATTCTGGGGACCACTaGCCTAATGAAGTTTATACCTCTTGTCACAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: AFGDSDFDSGDH*PNEVYTSCHSH Trigger: ATGACTGTGACAAGAGGTATAAACTTCATTAGGTCAGTGGTCCCCAGAATCAAAGTCGCTGTCACCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR GCA 72 bp | TGTGTTCTTTTGGACCAGTCAGGCAGAACTGATATTTaGGTACTGATAGCCATTAGAAGTGGACCTAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CVLLDQSGRTDI*VLIAIRSGPKE Trigger: CTCTTTAGGTCCACTTCTAATGGCTATCAGTACGCAAATATCAGTTCTGCCTGACTGGTCCAAAAGAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR TCA 72 bp | TGTAGCTATTGGAAGCCACTGCAGTGTGAGTCACTCTaGAAGTATGTACATGAAGTAAGAGAGAAAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: CSYWKPLQCESL*KYVHEVREKET Trigger: TGTTTCTTTCTCTCTTACTTCATGTACATACTTTCAGAGTGACTCACACTGCAGTGGCTTCCAATAGCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR TCA 90 bp | TTGACCTCCTGGTATGTGGTTGGGCTGCTCAGTAGGGCTCTCCCTGTAGTGGCCGAAGCAGCCCTCCAATaGTGCCTCCTATCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSWYVVGLLSRALPVVAEAALQ*CLLSGR Trigger: CCTTCCTGATAGGAGGCATCATTGGAGGGCTGCTTC...GGCCACTACAGGGAGAGCCCTACTGAGCAGCCCAACCACATACCAGGAGGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR GCA 90 bp | GAGGTCATGACCTTGATGATCAGGAGCCCTGCAGATCCGGAGGGGTTAGGTGGGGTACACTTGGTAGCCTaGCAGGTGGGGTCCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVMTLMIRSPADPEGLGGVHLVA*QVGSQN Trigger: ATTCTGGGACCCCACCTGGCAGGCTACCAAGTGTAC...CCCACCTAACCCCTCCGGATCTGCAGGGCTCCTGATCATCAAGGTCATGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR CAA 72 bp | ATCAGGAGCCCTGCAGATCCGGAGGGGTTAGGTGGGTaGGGAGAGGCTCCTGGTCAGATACTGGCTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IRSPADPEGLGG*GEAPGQILAET Trigger: AGTTTCAGCCAGTATCTGACCAGGAGCCTCTCCCAACCCACCTAACCCCTCCGGATCTGCAGGGCTCCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR GCA 90 bp | GAGACAGCACCTGCCCCTGCTGTCCACTTAAGGACCCAGTTACACAGCTATACCGTTTGGCACTGGAGGTaGAGGCCATGTGCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETAPAPAVHLRTQLHSYTVWHWR*RPCALG Trigger: TCCCAGAGCACATGGCCTGCACCTCCAGTGCCAAAC...GGTATAGCTGTGTAACTGGGTCCTTAAGTGGACAGCAGGGGCAGGTGCTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR GCA 90 bp | GATAACCCATCCAGGACCTTGAACAGCCATCTCGGAAGGCACGAGGAAAGGCAGGTTTGGCACTGGAGGTaGAGGCCATGTGCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DNPSRTLNSHLGRHEERQVWHWR*RPCALG Trigger: TCCCAGAGCACATGGCCTGCACCTCCAGTGCCAAAC...CTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| 3UTR CAA 72 bp | TGCAGGACCACTGGCAAGGATAACCCATCCAGGACCTaGAACAGCCATCTCGGAAGGCACGAGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRTTGKDNPSRT*NSHLGRHEERQ Trigger: CTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATCCTTGCCAGTGGTCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR TCA 90 bp | GATAACCCATCCAGGACCTTGAACAGCCATCTCGGAAGGCACGAGGAAAGGCAGGAAGCAGCCCTCCAATaGTGCCTCCTATCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNPSRTLNSHLGRHEERQEAALQ*CLLSGR Trigger: CCTTCCTGATAGGAGGCATCATTGGAGGGCTGCTTC...CTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR TCA 90 bp | GATAACCCATCCAGGACCTTGAACAGCCATCTCGGAAGGCACGAGGAAAGGCAGTGTCCTCTTTTCTGCTaGAGTAAGAGATGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DNPSRTLNSHLGRHEERQCPLFC*SKRWWP Trigger: CGGCCACCATCTCTTACTTCAGCAGAAAAGAGGACA...CTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCACCAGGTCTCTCCAGATaGTACGGTGGTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLRAHCLLISCHYSFSPGLSR*YGGGPL Trigger: CAGGGGACCACCACCGTATCATCTGGAGAGACCTGG...TGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGCCAGGTCTCTCCAGATaGTACGGTGGTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGNQLPDISDNSPRTRKKPGLSR*YGGGPL Trigger: CAGGGGACCACCACCGTATCATCTGGAGAGACCTGG...CTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCAGAGGCCTGATGCATCTCCAGGTTTaGCACTGGAGGTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQSTLPADFLPLQFLRGLMHLQV*HWRCRP Trigger: TGGCCTGCACCTCCAGTGCCAAACCTGGAGATGCAT...CAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CCA 90 bp | CTTAGCTGGTGCTGTGCTCCCATTCATGTGCAGCTGTGCTCCACCAAACATATCCAGATGATACGGTGGTaGTCCCCTGCCAGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWCCAPIHVQLCSTKHIQMIRW*SPARVS Trigger: TGAGACTCTGGCAGGGGACCACCACCGTATCATCTG...GATATGTTTGGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR GCA 90 bp | ACGACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGGTACACTTGGTAGCCTaGCAGGTGGGGTCCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TTGNQLPDISDNSPRTRKVHLVA*QVGSQN Trigger: ATTCTGGGACCCCACCTGGCAGGCTACCAAGTGTAC...CTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATTGTCCCAGGAGCTGGTaGTTCCTCTTCTTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PYNMAAPPVTPQSTLPADCPRSW*FLFLFT Trigger: TGTAAACAAGAAGAGGAAGCACCAGCTCCTGGGACA...ATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CCA 90 bp | CAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGCCAGATGATACGGTGGTaGTCCCCTGCCAGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QETNCLTSLTIHPERGRSQMIRW*SPARVS Trigger: TGAGACTCTGGCAGGGGACCACCACCGTATCATCTG...GCTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGCTGGTGCTGTGCTCCCATTCATGTGCAGCTGTGCTCCACCAAACATATCTGTCCTCTTTTCTGCTaGAGTAAGAGATGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSWCCAPIHVQLCSTKHICPLFC*SKRWWP Trigger: CGGCCACCATCTCTTACTTCAGCAGAAAAGAGGACA...GATATGTTTGGTGGAGCACAGCTGCACATGAATGGGAGCACAGCACCAGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGCATCCATGGCCTCCAGGTTCCAGATGAAACACTGTAGTTCTATTTCAGCTTCACCAAGGTGCTaGAGGTCTCAGAGGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VVASMASRFQMKHCSSISASPRC*RSQRGL Trigger: AAGTCCCCTCTGAGACCTGCAGCACCTTGGTGAAGC...TGAAATAGAACTACAGTGTTTCATCTGGAACCTGGAGGCCATGGATGCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGATGCATCTCCAGGTTTaGCACTGGAGGTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNQLPDISDNSPRTRKKMHLQV*HWRCRP Trigger: TGGCCTGCACCTCCAGTGCCAAACCTGGAGATGCAT...CTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| 3UTR CAA 72 bp | GGAGAGGCTCCTGGTCAGATACTGGCTGAAACTGGGTaGTATCCCTTTTCCTTCCTGCACATGAACACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEAPGQILAETG*YPFSFLHMNTH Trigger: ATGGGTGTTCATGTGCAGGAAGGAAAAGGGATACAACCCAGTTTCAGCCAGTATCTGACCAGGAGCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR CAA 72 bp | TTCTCAATCTCTGAGATCCTGTTTGAGGTCATGACCTaGATGATCAGGAGCCCTGCAGATCCGGAGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSISEILFEVMT*MIRSPADPEGL Trigger: TAACCCCTCCGGATCTGCAGGGCTCCTGATCATCAAGGTCATGACCTCAAACAGGATCTCAGAGATTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| 3UTR CAA 72 bp | CCTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTaGCCATTACAGTTTCTCAGAGGCCTGTCAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVTPQSTLPADF*PLQFLRGLSDV Trigger: TACATCTGACAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR GCA 90 bp | CAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGCTGTCCCAGGAGCTGGTaGTTCCTCTTCTTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QETNCLTSLTIHPERGRSCPRSW*FLFLFT Trigger: TGTAAACAAGAAGAGGAAGCACCAGCTCCTGGGACA...GCTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATTACAAATTTTGTGTTTaGTCTTGGACTGGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYNMAAPPVTPQSTLPADYKFCV*SWTGGS Trigger: GCTTCCTCCAGTCCAAGACCAAACACAAAATTTGTA...ATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR TCA 90 bp | GGTACAGACACACAGAGAAATAACAGGCACAGTGGCTGCTCACTAGATCAACTATCAGCACTCTCTGGGTaGCACTTTTGCTGGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDTQRNNRHSGCSLDQLSALSG*HFCWIP Trigger: AGGTATCCAGCAAAAGTGTCACCCAGAGAGTGCTGA...TAGTTGATCTAGTGAGCAGCCACTGTGCCTGTTATTTCTCTGTGTGTCTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR TCA 90 bp | CAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGCAAGTCCTCTTGCACTTaGCGAATTTGTTGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QETNCLTSLTIHPERGRSKSSCT*RICCDS Trigger: TGAATCACAACAAATTCGTCAAGTGCAAGAGGACTT...GCTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCACTCTTCTTGTTTACATaGTACACGGAGAACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLRAHCLLISCHYSFSLFLFT*YTENFS Trigger: GCTGAAGTTCTCCGTGTACCATGTAAACAAGAAGAG...TGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCAAAGTCCTCTTGCACTTaGCGAATTTGTTGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLRAHCLLISCHYSFSKSSCT*RICCDS Trigger: TGAATCACAACAAATTCGTCAAGTGCAAGAGGACTT...TGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGTACAAATTTTGTGTTTaGTCTTGGACTGGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGNQLPDISDNSPRTRKKYKFCV*SWTGGS Trigger: GCTTCCTCCAGTCCAAGACCAAACACAAAATTTGTA...CTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CAA 90 bp | GATAACCCATCCAGGACCTTGAACAGCCATCTCGGAAGGCACGAGGAAAGGCAGGCGGTGTCCAGCTCATaGGTGTCAACCTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DNPSRTLNSHLGRHEERQAVSSS*VSTLKL Trigger: CAGCTTCAAGGTTGACACCAATGAGCTGGACACCGC...CTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAGATGTACCAGTCCGCCAACTTTCCCTGGTCATCCAGGGAAAAACCACTGGCGGTGTCCAGCTCATaGGTGTCAACCTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CQMYQSANFPWSSREKPLAVSSS*VSTLKL Trigger: CAGCTTCAAGGTTGACACCAATGAGCTGGACACCGC...CAGTGGTTTTTCCCTGGATGACCAGGGAAAGTTGGCGGACTGGTACATCTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CAA 90 bp | TACAATATGGCTGCTCCTCCTGTCACTCCTCAGAGCACACTGCCTGCTGATTTCACAGCCGAAGTCCTCTaGCACTTGACGAATTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YNMAAPPVTPQSTLPADFTAEVL*HLTNLL Trigger: CAACAAATTCGTCAAGTGCAAGAGGACTTCGGCTGT...GAAATCAGCAGGCAGTGTGCTCTGAGGAGTGACAGGAGGAGCAGCCATATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CAA 90 bp | CGACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAACAGCCGAAGTCCTCTaGCACTTGACGAATTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQETNCLTSLTIHPERGRTAEVL*HLTNLL Trigger: CAACAAATTCGTCAAGTGCAAGAGGACTTCGGCTGT...TCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAGCACACTGCCTGCTGATTTCTTGCCATTACAGTTTCTCAGAGGCCTGTCATTGGTGTCAACCTaGAAGCTGAAGGTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PQSTLPADFLPLQFLRGLSLVST*KLKVSL Trigger: CAATGAAACCTTCAGCTTCAAGGTTGACACCAATGA...CAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
||
| CDS-3UTR CAA 90 bp | CAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGCTGTGGGTTACAAATTTaGTGTTTGGTCTTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QETNCLTSLTIHPERGRSCGLQI*CLVLDW Trigger: CCAGTCCAAGACCAAACACAAAATTTGTAACCCACA...GCTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
||
| CDS-3UTR CAA 90 bp | GGTACAGACACACAGAGAAATAACAGGCACAGTGGCTGCTCACTAGATCAACTATGGTGCTTCCTCTTCTaGTTTACATGGTACACGGAG | + |
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Preference number: 5 (lower is better) Translates to: GTDTQRNNRHSGCSLDQLWCFLF*FTWYTE Trigger: CTCCGTGTACCATGTAAACAAGAAGAGGAAGCACCA...TAGTTGATCTAGTGAGCAGCCACTGTGCCTGTTATTTCTCTGTGTGTCTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| CDS-3UTR CAA 90 bp | CGACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGATTACAAATTTTGTGTTaGGTCTTGGACTGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RQETNCLTSLTIHPERGRLQILC*VLDWRK Trigger: CTTCCTCCAGTCCAAGACCAAACACAAAATTTGTAA...TCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
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| CDS-3UTR CAA 90 bp | ACAGGAAACCAACTGCCTGACATCTCTGACAATTCACCCAGAACGAGGAAGAAGTCATTGGTGTCAACCTaGAAGCTGAAGGTTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: TGNQLPDISDNSPRTRKKSLVST*KLKVSL Trigger: CAATGAAACCTTCAGCTTCAAGGTTGACACCAATGA...CTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119693.8 |
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| CDS-3UTR CAA 90 bp | GGTACAGACACACAGAGAAATAACAGGCACAGTGGCTGCTCACTAGATCAACTATTACAAATTTTGTGTTaGGTCTTGGACTGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GTDTQRNNRHSGCSLDQLLQILC*VLDWRK Trigger: CTTCCTCCAGTCCAAGACCAAACACAAAATTTGTAA...TAGTTGATCTAGTGAGCAGCCACTGTGCCTGTTATTTCTCTGTGTGTCTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| CDS-3UTR CAA 90 bp | CACCAAACATATCAGTTCTCAATCTCTGAGATCCTGTTTGAGGTCATGACCTTGTGTGGGTTACAAATTTaGTGTTTGGTCTTGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: HQTYQFSISEILFEVMTLCGLQI*CLVLDW Trigger: CCAGTCCAAGACCAAACACAAAATTTGTAACCCACA...CAAGGTCATGACCTCAAACAGGATCTCAGAGATTGAGAACTGATATGTTTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035351.7 |
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| CDS CCA 72 bp | TGCTCCCCATCTCACATGCATCTCCAGGTTTGGCACTaGAGGTGCAGGCCATGTGCTCTGGGACAGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSPSHMHLQVWH*RCRPCALGQGR Trigger: CCTGCCCTGTCCCAGAGCACATGGCCTGCACCTCCAGTGCCAAACCTGGAGATGCATGTGAGATGGGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035351.7 ENSMUST00000119693.8 |
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| CDS CAA 90 bp | CCCAGTCTCGACCTTGGTGAGAAGGGGGTACCACAAATGGTACACTaGGTAGCCTGCCAGGTGGGGTCCCAGAATACTGGTAGAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSLDLGEKGVPQMVH*VACQVGSQNTGRAC Trigger: ACAGGCTCTACCAGTATTCTGGGACCCCACCTGGCAGGCTACCAAGTGTACCATTTGTGGTACCCCCTTCTCACCAAGGTCGAGACTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035351.7 ENSMUST00000119693.8 |
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| CDS CAA 72 bp | GACCTTGGTGAGAAGGGGGTACCACAAATGGTACACTaGGTAGCCTGCCAGGTGGGGTCCCAGAATACTGGT | + |
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Preference number: 6 (lower is better) Translates to: DLGEKGVPQMVH*VACQVGSQNTG Trigger: ACCAGTATTCTGGGACCCCACCTGGCAGGCTACCAAGTGTACCATTTGTGGTACCCCCTTCTCACCAAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035351.7 ENSMUST00000119693.8 |
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