Pregenerated sensors for SYT13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027220Ensembl transcript IDs: ENSMUST00000028648.3
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGGGTATAGGCATGTGGACAGAGCACGAGGGATGACTGACAGCTaGGCCTGGAAGATGACTGTGTCCAAGAAAGACGGTCAGTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: FGYRHVDRARGMTDS*AWKMTVSKKDGQWP Trigger: CGGCCACTGACCGTCTTTCTTGGACACAGTCATCTTCCAGGCTCAGCTGTCAGTCATCCCTCGTGCTCTGTCCACATGCCTATACCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR GCA 90 bp | ACAGACACATGCACGGTCTTGGTGGACAAACACTCAACAAATAGATaGCTAGTTGTCCTGGGGAGAGGATTCACAGAGGACTGGGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: TDTCTVLVDKHSTNR*LVVLGRGFTEDWGE Trigger: TTCACCCCAGTCCTCTGTGAATCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGACCGTGCATGTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 90 bp | TTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTaGAGAAGAAGCACAGCCAACGGAGGAGCCAGGAAGTGCCACCAA | + |
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Preference number: 1 (lower is better) Translates to: LVPSLTSLSNLQRRF*RRSTANGGARKCHQ Trigger: TTGGTGGCACTTCCTGGCTCCTCCGTTGGCTGTGCTTCTTCTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR TCA 90 bp | CGCCACCGCTCACTTTTTAGTATTGGGAATACAGTAAGAGAGGAATaGGGTCTTGGCCTCAGCCAACACGTCTGCATCTGTCTTTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: RHRSLFSIGNTVREE*GLGLSQHVCICLWV Trigger: TACCCAAAGACAGATGCAGACGTGTTGGCTGAGGCCAAGACCTCATTCCTCTCTTACTGTATTCCCAATACTAAAAAGTGAGCGGTGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR TCA 90 bp | GCACATATCTTTTTCCATAACACAGATGAGCATGATACAGTCTTCTaGGTGCCAGTCCCACTCACTGTCCTGGCGCCACCGCTCACTTTT | + |
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Preference number: 1 (lower is better) Translates to: AHIFFHNTDEHDTVF*VPVPLTVLAPPLTF Trigger: AAAAGTGAGCGGTGGCGCCAGGACAGTGAGTGGGACTGGCACTCAGAAGACTGTATCATGCTCATCTGTGTTATGGAAAAAGATATGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 90 bp | ATGAGCATGATACAGTCTTCTGAGTGCCAGTCCCACTCACTGTCCTaGCGCCACCGCTCACTTTTTAGTATTGGGAATACAGTAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: MSMIQSSECQSHSLS*RHRSLFSIGNTVRE Trigger: CTCTCTTACTGTATTCCCAATACTAAAAAGTGAGCGGTGGCGCCAGGACAGTGAGTGGGACTGGCACTCAGAAGACTGTATCATGCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 90 bp | ACTGCTTCAGCTCAATGTGAGCAGGGGCTGCCGACTGAGGGTACCTaGCACATATCTTTTTCCATAACACAGATGAGCATGATACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: TASAQCEQGLPTEGT*HISFSITQMSMIQS Trigger: AGACTGTATCATGCTCATCTGTGTTATGGAAAAAGATATGTGCCAGGTACCCTCAGTCGGCAGCCCCTGCTCACATTGAGCTGAAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 90 bp | TGTGACCACGATGTCTCATGCGACTTTTTGTGCTTTTATGTGGAATaGCATCACAAACACGCAGCATCTAACAACAGGAAACAGCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: CDHDVSCDFLCFYVE*HHKHAASNNRKQQG Trigger: CCCTTGCTGTTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATCGTGGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 90 bp | AGACATGTGACCACGATGTCTCATGCGACTTTTTGTGCTTTTATGTaGAATGGCATCACAAACACGCAGCATCTAACAACAGGAAACAGC | + |
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Preference number: 1 (lower is better) Translates to: RHVTTMSHATFCAFM*NGITNTQHLTTGNS Trigger: GCTGTTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATCGTGGTCACATGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 90 bp | GTTTTCTCTTTAAAGTTCATCTACCTCCTCATTTACATAGCCAGATaGAACAAGCCAAGCTCAGAGCTACTTCGTCCTGAAGTACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: VFSLKFIYLLIYIAR*NKPSSELLRPEVQA Trigger: TGCCTGTACTTCAGGACGAAGTAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAACTTTAAAGAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGCCCCCAGAGCCTTCTCTAATCAGAATGGACAGACACATGCACGGTCTTGGGGGATGACTGACAGCTaGGCCTGGAAGATGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: LAPRAFSNQNGQTHARSWGMTDS*AWKMTV Trigger: CACAGTCATCTTCCAGGCTCAGCTGTCAGTCATCCC...CCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAGGCTCTGGGGGCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCCAGAGCCTTCTCTAATCAGAATGGACAGACACATGCACGGTCTTGGTCCCACTCACTGTCCTaGCGCCACCGCTCACTTTTT | + |
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Preference number: 2 (lower is better) Translates to: LAPRAFSNQNGQTHARSWSHSLS*RHRSLF Trigger: AAAAAGTGAGCGGTGGCGCCAGGACAGTGAGTGGGA...CCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAGGCTCTGGGGGCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCCAGAGCCTTCTCTAATCAGAATGGACAGACACATGCACGGTCTTGGAGAGGAATGAGGTCTTaGCCTCAGCCAACACGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LAPRAFSNQNGQTHARSWRGMRS*PQPTRL Trigger: CAGACGTGTTGGCTGAGGCCAAGACCTCATTCCTCT...CCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAGGCTCTGGGGGCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCCAGAGCCTTCTCTAATCAGAATGGACAGACACATGCACGGTCTTGGAGAGGAAAGGCTGCCTaGATAGGGGAGAAGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: LAPRAFSNQNGQTHARSWRGKAA*IGEKGS Trigger: AGATCCCTTCTCCCCTATCCAGGCAGCCTTTCCTCT...CCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAGGCTCTGGGGGCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | AACAGCAAGGGTAGAAACACTGCACAGGACCAACTTTCTCCTCCAAAGATTCCCGCCTTCACACTGTCCTaGTGCTGGGCCCCCGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: NSKGRNTAQDQLSPPKIPAFTLS*CWAPGD Trigger: ATCTCCGGGGGCCCAGCACCAGGACAGTGTGAAGGC...GGGAATCTTTGGAGGAGAAAGTTGGTCCTGTGCAGTGTTTCTACCCTTGCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGCATGATACAGTCTTCTaGGTGCCAGTCCCACTCACT | + |
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Preference number: 2 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVHDTVF*VPVPLT Trigger: AGTGAGTGGGACTGGCACTCAGAAGACTGTATCATG...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGACAGCCCCTCCTGCTCTaGTCCAGAACCCCTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGQPLLL*SRTPVL Trigger: TAGCACAGGGGTTCTGGAGCAGAGCAGGAGGGGCTG...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCCAGAGCCTTCTCTAATCAGAATGGACAGACACATGCACGGTCTTGGAGCAGTAGCCCAGCCTaGAATGGCCTCTCACTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LAPRAFSNQNGQTHARSWSSSPA*NGLSLY Trigger: ATAAAGTGAGAGGCCATTCCAGGCTGGGCTACTGCT...CCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAGGCTCTGGGGGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR GCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGGAATGGACAGACACATaGACGGTCTTGGTGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVEWTDT*TVLVDK Trigger: TTTGTCCACCAAGACCGTGCATGTGTCTGTCCATTC...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGACTCTTGCTTACCTCCTaGAGCTGGACTGGCAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGLLLTS*SWTGKL Trigger: GAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAG...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR GCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCAATGTGAGCAGGGGCTaGCGACTGAGGGTACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVNVSRG*RLRVPG Trigger: GCCAGGTACCCTCAGTCGGCAGCCCCTGCTCACATT...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGAAGCGCAGCCCCTCCTaGTCTGCTCCAGAACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VFGSQSNISEQFTEEVLEKRSPS*SAPEPL Trigger: CAGGGGTTCTGGAGCAGAGCAGGAGGGGCTGCGCTT...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCCAGAGCCTTCTCTAATCAGAATGGACAGACACATGCACGGTCTTGGCCAGAAATCACTCCCTaGCAAAGACATAGAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LAPRAFSNQNGQTHARSWPEITP*QRHREV Trigger: AACCTCTCTATGTCTTTGCCAGGGAGTGATTTCTGG...CCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAGGCTCTGGGGGCGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CAA 90 bp | TTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTaGGAGAAGAAGCACAGCCAACGGAGGAGCCAGGAAGTGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: FGSQSNISEQFTEEV*EKKHSQRRSQEVPP Trigger: TGGTGGCACTTCCTGGCTCCTCCGTTGGCTGTGCTTCTTCTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGACACTGTCCTGGTGCTaGGCCCCCGGAGATCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VFGSQSNISEQFTEEVLETLSWC*APGDQE Trigger: CTCTTGATCTCCGGGGGCCCAGCACCAGGACAGTGT...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCAGCACGAGGGATGACTaGCAGCTGAGCCTGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVSTRDD*QLSLED Trigger: ATCTTCCAGGCTCAGCTGTCAGTCATCCCTCGTGCT...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR GCA 90 bp | AACAGCAAGGGTAGAAACACTGCACAGGACCAACTTTCTCCTCCAAAGATTCCCATACAGTCTTCTGAGTaGCAGTCCCACTCACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: NSKGRNTAQDQLSPPKIPIQSSE*QSHSLS Trigger: GGACAGTGAGTGGGACTGGCACTCAGAAGACTGTAT...GGGAATCTTTGGAGGAGAAAGTTGGTCCTGTGCAGTGTTTCTACCCTTGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGATTTACATAGCCAGATaGAACAAGCCAAGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVIYIAR*NKPSSE Trigger: CTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAAT...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCGCTGAGCCTGGAAGATaGCTGTGTCCAAGAAAGACG | + |
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Preference number: 2 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVAEPGR*LCPRKT Trigger: CGTCTTTCTTGGACACAGTCATCTTCCAGGCTCAGC...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGAACATGTCCCCCAAACTaGAGGGAGGCATGTTATCAA | + |
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Preference number: 2 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGTCPPN*REACYQ Trigger: TTGATAACATGCCTCCCTCCAGTTTGGGGGACATGT...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGATTACAGAGGAGGTTTTaGAGAAGAAGCACAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGLQRRF*RRSTAN Trigger: GTTGGCTGTGCTTCTTCTCCAAAACCTCCTCTGTAA...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAAAACTTGGAAACACACAAATACTCACTAGTGCTCAGGGATCAAATGATCACAGAGGACTGGGGTaGACTCCTAACCTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVKLGNTQILTSAQGSNDHRGLG*TPNLPA Trigger: TGCTGGGAGGTTAGGAGTTCACCCCAGTCCTCTGTG...ATCATTTGATCCCTGAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CAA 90 bp | CCAAAGTGTAACCAGACATGTGACCACGATGTCTCATGCGACTTTTaGTGCTTTTATGTGGAATGGCATCACAAACACGCAGCATCTAAC | + |
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Preference number: 2 (lower is better) Translates to: PKCNQTCDHDVSCDF*CFYVEWHHKHAASN Trigger: GTTAGATGCTGCGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATCGTGGTCACATGTCTGGTTACACTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAAAACTTGGAAACACACAAATACTCACTAGTGCTCAGGGATCAAATGATCTGCTGGCCAGCCAGTaGTTCTCAACCTTCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: EVKLGNTQILTSAQGSNDLLASQ*FSTFLV Trigger: CACTAGGAAGGTTGAGAATCACTGGCTGGCCAGCAG...ATCATTTGATCCCTGAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | AATGGCATCACAAACACGCAGCATCTAACAACAGGAAACAGCAAGGGTAGAAACCCGACTGAGGGTACCTaGCACATATCTTTTTCCATA | + |
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Preference number: 2 (lower is better) Translates to: NGITNTQHLTTGNSKGRNPTEGT*HISFSI Trigger: TATGGAAAAAGATATGTGCCAGGTACCCTCAGTCGG...GTTTCTACCCTTGCTGTTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCTTTCTTGTGTTTTGGTaGTCTCCAACCACAGAATTG | + |
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Preference number: 2 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVFLVFW*SPTTEL Trigger: CAATTCTGTGGTTGGAGATCACCAAAACACAAGAAA...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR CCA 90 bp | AATGGCATCACAAACACGCAGCATCTAACAACAGGAAACAGCAAGGGTAGAAACAATGTAGCTCGAGAGTaGAATATGAACAGCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: NGITNTQHLTTGNSKGRNNVARE*NMNSRN Trigger: ATTTCTGCTGTTCATATTCCACTCTCGAGCTACATT...GTTTCTACCCTTGCTGTTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAAAACTTGGAAACACACAAATACTCACTAGTGCTCAGGGATCAAATGATGTCGTCAAGGTTTATTaGAGTTGGCAGAGGTTCATG | + |
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Preference number: 2 (lower is better) Translates to: EVKLGNTQILTSAQGSNDVVKVY*SWQRFM Trigger: CATGAACCTCTGCCAACTTCAATAAACCTTGACGAC...ATCATTTGATCCCTGAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 72 bp | GTGCTGGGCCCCCGGAGATCAAGAGGAAAGGCTGCCTaGATAGGGGAGAAGGGATCTTATCAAGCGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: VLGPRRSRGKAA*IGEKGSYQAQP Trigger: GGGCTGCGCTTGATAAGATCCCTTCTCCCCTATCCAGGCAGCCTTTCCTCTTGATCTCCGGGGGCCCAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR GCA 72 bp | CCTGGTGCTGGGCCCCCGGAGATCAAGAGGAAAGGCTaGCTGGATAGGGGAGAAGGGATCTTATCAAGCGCA | + |
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Preference number: 3 (lower is better) Translates to: PGAGPPEIKRKG*LDRGEGILSSA Trigger: TGCGCTTGATAAGATCCCTTCTCCCCTATCCAGGCAGCCTTTCCTCTTGATCTCCGGGGGCCCAGCACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 72 bp | AAGCAGAGAGTTCCTGCCTTCACACTGTCCTGGTGCTaGGCCCCCGGAGATCAAGAGGAAAGGCTGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: KQRVPAFTLSWC*APGDQEERLPG Trigger: TCCAGGCAGCCTTTCCTCTTGATCTCCGGGGGCCCAGCACCAGGACAGTGTGAAGGCAGGAACTCTCTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR TCA 72 bp | AGTTGTCCTGGGGAGAGGATTCACAGAGGACTGGGGTaGACTCCTAACCTCCCAGCAGTAGCCCAGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SCPGERIHRGLG*TPNLPAVAQPG Trigger: TCCAGGCTGGGCTACTGCTGGGAGGTTAGGAGTTCACCCCAGTCCTCTGTGAATCCTCTCCCCAGGACAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR GCA 72 bp | AGTAAGCAGAGAGTTCCTGCCTTCACACTGTCCTGGTaGTGGGCCCCCGGAGATCAAGAGGAAAGGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: SKQRVPAFTLSW*WAPGDQEERLP Trigger: AGGCAGCCTTTCCTCTTGATCTCCGGGGGCCCAGCACCAGGACAGTGTGAAGGCAGGAACTCTCTGCTTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR TCA 72 bp | AGGCATGTGGACAGAGCACGAGGGATGACTGACAGCTaGGCCTGGAAGATGACTGTGTCCAAGAAAGACGGT | + |
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Preference number: 3 (lower is better) Translates to: RHVDRARGMTDS*AWKMTVSKKDG Trigger: ACCGTCTTTCTTGGACACAGTCATCTTCCAGGCTCAGCTGTCAGTCATCCCTCGTGCTCTGTCCACATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR TCA 72 bp | CCCATGACATTGGTGCTGTGCTATAGGTGGCCACACTaGGGCGCTGTGGAGCAAGGAAGTAATGACAACTCG | + |
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Preference number: 3 (lower is better) Translates to: PMTLVLCYRWPH*GAVEQGSNDNS Trigger: CGAGTTGTCATTACTTCCTTGCTCCACAGCGCCTCAGTGTGGCCACCTATAGCACAGCACCAATGTCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 72 bp | TGGTGCTGTGCTATAGGTGGCCACACTGAGGCGCTGTaGAGCAAGGAAGTAATGACAACTCGAATTCCGGCT | + |
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Preference number: 3 (lower is better) Translates to: WCCAIGGHTEAL*SKEVMTTRIPA Trigger: AGCCGGAATTCGAGTTGTCATTACTTCCTTGCTCCACAGCGCCTCAGTGTGGCCACCTATAGCACAGCACCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR TCA 72 bp | TTTTTCCATAACACAGATGAGCATGATACAGTCTTCTaGGTGCCAGTCCCACTCACTGTCCTGGCGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: FFHNTDEHDTVF*VPVPLTVLAPP Trigger: CGGTGGCGCCAGGACAGTGAGTGGGACTGGCACTCAGAAGACTGTATCATGCTCATCTGTGTTATGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CCA 72 bp | GCTCAATGTGAGCAGGGGCTGCCGACTGAGGGTACCTaGCACATATCTTTTTCCATAACACAGATGAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: AQCEQGLPTEGT*HISFSITQMSM Trigger: CATGCTCATCTGTGTTATGGAAAAAGATATGTGCCAGGTACCCTCAGTCGGCAGCCCCTGCTCACATTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | ATACAGTCTTCTGAGTGCCAGTCCCACTCACTGTCCTaGCGCCACCGCTCACTTTTTAGTATTGGGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: IQSSECQSHSLS*RHRSLFSIGNT Trigger: TGTATTCCCAATACTAAAAAGTGAGCGGTGGCGCCAGGACAGTGAGTGGGACTGGCACTCAGAAGACTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | AGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTaGAGAAGAAGCACAGCCAACGGAGGAGCCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSLSNLQRRF*RRSTANGGARK Trigger: CTTCCTGGCTCCTCCGTTGGCTGTGCTTCTTCTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGTCTCCAACCACAGAATaGTTCTCATTGCTACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVSPTTE*FSLLLC Trigger: ACAAAGTAGCAATGAGAACAATTCTGTGGTTGGAGA...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGACTAGTGGGGCATCTATaGGAAATATCAACAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGLVGHL*EISTGA Trigger: TGCCCCTGTTGATATTTCCAATAGATGCCCCACTAG...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCCGTCTGCATCTGTCTTaGGGTATAGGCATGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVRLHLS*GIGMWT Trigger: TGTCCACATGCCTATACCCAAAGACAGATGCAGACG...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCTACCTCCTCATTTACATAGCCAGATGGAACAAGCCAAGCTCAGAGCTAGCTAAGGACAGAGGCTaGTGTATTCCACCGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FIYLLIYIARWNKPSSELAKDRG*CIPPEH Trigger: ATGTTCCGGTGGAATACACAAGCCTCTGTCCTTAGC...TAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | TCACTTTATTTCCACCTCTTTCCAGAAATCACTCCCTaGCAAAGACATAGAGAGGTTCCTTCCCAAGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLYFHLFPEITP*QRHREVPSQAD Trigger: ATCAGCTTGGGAAGGAACCTCTCTATGTCTTTGCCAGGGAGTGATTTCTGGAAAGAGGTGGAAATAAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | TTAAAGTTCATCTACCTCCTCATTTACATAGCCAGATaGAACAAGCCAAGCTCAGAGCTACTTCGTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKFIYLLIYIAR*NKPSSELLRPE Trigger: TTCAGGACGAAGTAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAACTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | ACCACGATGTCTCATGCGACTTTTTGTGCTTTTATGTaGAATGGCATCACAAACACGCAGCATCTAACAACA | + |
|
Preference number: 3 (lower is better) Translates to: TTMSHATFCAFM*NGITNTQHLTT Trigger: TGTTGTTAGATGCTGCGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATCGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR TCA 72 bp | GGAATGGCTGGAAACAGATTAAGCCGATGTAAAAGGTaGCTGAAAGTTTTTGGTTCCCAGTCTAACATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GMAGNRLSRCKR*LKVFGSQSNIS Trigger: AGAGATGTTAGACTGGGAACCAAAAACTTTCAGTCACCTTTTACATCGGCTTAATCTGTTTCCAGCCATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | GATGTCTCATGCGACTTTTTGTGCTTTTATGTGGAATaGCATCACAAACACGCAGCATCTAACAACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DVSCDFLCFYVE*HHKHAASNNRK Trigger: TTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | CTTCTCAGTATAGGGCACAAGAAGAAAATTCAACTGTaGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSIGHKKKIQL*SSRFIEVGRGS Trigger: TGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCTTGTGCCCTATACTGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAAAATTCAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGTCTCATGCGACTTTTaGTGCTTTTATGTGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: RRKFNCGRQGLLKLAEVHVSCDF*CFYVEW Trigger: CCATTCCACATAAAAGCACAAAAAGTCGCATGAGAC...ATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CCA 72 bp | GGAAGGCTCAGAATAACAAATCAGAATGTAAGATCCTaGTCTTCTCAGTATAGGGCACAAGAAGAAAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRLRITNQNVRS*SSQYRAQEENS Trigger: TGAATTTTCTTCTTGTGCCCTATACTGAGAAGACCAGGATCTTACATTCTGATTTGTTATTCTGAGCCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR GCA 72 bp | AATATTAATGTAAAGGAACAAAGAGAAACACTGGGCTaGCAACCCGATTGGAAAACGATTTATTTACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: NINVKEQRETLG*QPDWKTIYLPL Trigger: CAGTGGTAAATAAATCGTTTTCCAATCGGGTTGGCAGCCCAGTGTTTCTCTTTGTTCCTTTACATTAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGGGATGCTGGTGGCAGTaGCCAGCGTGGCGCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVGCWWQ*PAWRPA Trigger: CGCTGGGCGCCACGCTGGGCACTGCCACCAGCATCC...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGAGGCGACTGTCACTCTaGGCCTGGGGGCTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVRRLSL*AWGLAG Trigger: ACCTGCCAGCCCCCAGGCCCAGAGTGACAGTCGCCT...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGTGGGAGGTAGCTGATTaGCAGAAGGACCTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVWEVAD*QKDLPG Trigger: GCCGGGGAGGTCCTTCTGTCAATCAGCTACCTCCCA...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGCTATAGGTGGCCACACTGAGGCGCTGTGGAGCAAGGAAGTAATGACAACAGCGCAAGGATGCTaGTGGCAGTGCCCAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCAIGGHTEALWSKEVMTTAQGC*WQCPAW Trigger: CCACGCTGGGCACTGCCACCAGCATCCTTGCGCTGT...TGTCATTACTTCCTTGCTCCACAGCGCCTCAGTGTGGCCACCTATAGCACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGAGGAGAGGTCGGGGCTaGACAGGCTCCGTGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVRRGRG*TGSVDF Trigger: AAAGTCCACGGAGCCTGTCCAGCCCCGACCTCTCCT...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGAGCATCTCCTCCCAGTaGCTGCGCTCAGAGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVSISSQ*LRSEPE Trigger: CTCGGGCTCTGAGCGCAGCCACTGGGAGGAGATGCT...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGCAGCTGGGAGGTAGCTaGTTGACAGAAGGACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVQLGGS*LTEGPP Trigger: GGGAGGTCCTTCTGTCAATCAGCTACCTCCCAGCTG...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGTACAGGTGCAGTTGGTaGCACATGGCGATCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVYRCSW*HMAICR Trigger: CCGGCAGATCGCCATGTGGCACCAACTGCACCTGTA...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGATGGGGCCGTCACGGCTaGCCGGGGACCATAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGWGRHG*PGTIDV Trigger: GACATCTATGGTCCCCGGCCAGCCGTGACGGCCCCA...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGCTATAGGTGGCCACACTGAGGCGCTGTGGAGCAAGGAAGTAATGACAAGCTCCTCTGTGACCTaGCTCTTGAGGCGACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCAIGGHTEALWSKEVMTSSSVT*LLRRLS Trigger: TGACAGTCGCCTCAAGAGGCAGGTCACAGAGGAGCT...TGTCATTACTTCCTTGCTCCACAGCGCCTCAGTGTGGCCACCTATAGCACAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | TTCATCTACCTCCTCATTTACATAGCCAGATGGAACAAGCCAAGCTCAGAGCTAGCGCAAGGATGCTGGTaGCAGTGCCCAGCGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FIYLLIYIARWNKPSSELAQGCW*QCPAWR Trigger: GCGCCACGCTGGGCACTGCCACCAGCATCCTTGCGC...TAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | TTCATCTACCTCCTCATTTACATAGCCAGATGGAACAAGCCAAGCTCAGAGCTACATGCAGGCCTAGGCTaGAGTGGCCCAGCTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIYLLIYIARWNKPSSELHAGLG*SGPARS Trigger: GCTGCGAGCTGGGCCACTGCAGCCTAGGCCTGCATG...TAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | AACAGCAAGGGTAGAAACACTGCACAGGACCAACTTTCTCCTCCAAAGATTCCCGTAGTTGATGACTTCTaGGGCCGTCACGGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSKGRNTAQDQLSPPKIPVVDDF*GRHGWP Trigger: CGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTAC...GGGAATCTTTGGAGGAGAAAGTTGGTCCTGTGCAGTGTTTCTACCCTTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGTCACAGCCTCCTTCATaGTCACTGGTGACAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVSQPPS*SLVTAS Trigger: GGAAGCTGTCACCAGTGACCATGAAGGAGGCTGTGA...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR TCA 90 bp | AATGGCATCACAAACACGCAGCATCTAACAACAGGAAACAGCAAGGGTAGAAACCCACAGAGCCGGTCTTaGCAGCCACGCTGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NGITNTQHLTTGNSKGRNPQSRS*QPRCLG Trigger: TCCAAGGCAGCGTGGCTGTCAAGACCGGCTCTGTGG...GTTTCTACCCTTGCTGTTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGACGGGGTTGATCTTGTaGTTGGCCCGTTTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVTGLIL*LARFVC Trigger: ACAGACAAAACGGGCCAAGCACAAGATCAACCCCGT...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | TTCATCTACCTCCTCATTTACATAGCCAGATGGAACAAGCCAAGCTCAGAGCTATCTCCTCCCAGTGGCTaGGCTCAGAGCCCGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIYLLIYIARWNKPSSELSPPSG*AQSPRH Trigger: ATGCCTCGGGCTCTGAGCGCAGCCACTGGGAGGAGA...TAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGGGAGGCATGTTATCAAGAGACCACGTTTTCTCTTTAAAGTTCATCTATGGCAGTGCCCAGCGTaGCGCCCAGCGCGATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGRHVIKRPRFLFKVHLWQCPA*RPARSQ Trigger: CTGTGATCGCGCTGGGCGCCACGCTGGGCACTGCCA...TAGATGAACTTTAAAGAGAAAACGTGGTCTCTTGATAACATGCCTCCCTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGAGCAGCAACCCCTTCTTaGGGTGCATGTGTCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGAATPS*GACVGT Trigger: TGTGCCGACACATGCACCCCAAGAAGGGGTTGCTGC...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | CAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGGTGTTTGATGGGCCTGGTTCCAGCTaGCAGCCTTCTCTGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLWSSRFIEVGRGSWVFDGPGSS*QPSLGS Trigger: GGAACCCAGAGAAGGCTGCCAGCTGGAACCAGGCCC...ATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGCTATAGGTGGCCACACTGAGGCGCTGTGGAGCAAGGAAGTAATGACATTCTTCTTCAGCTTCTaGGCCTGGTGTTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCAIGGHTEALWSKEVMTFFFSF*AWCFKV Trigger: GACCTTGAAACACCAGGCTCAGAAGCTGAAGAAGAA...TGTCATTACTTCCTTGCTCCACAGCGCCTCAGTGTGGCCACCTATAGCACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGTCAGAGCCCGAGGCATaGAGGCCTAGGCTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFGSQSNISEQFTEEVLESEPEA*RPRLQW Trigger: CCACTGCAGCCTAGGCCTGCATGCCTCGGGCTCTGA...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | CAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGGTGTTTGATGCTGGCAGCCTTCTCTaGGTTCCAGGTCTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLWSSRFIEVGRGSWVFDAGSLL*VPGLHD Trigger: GTCATGGAGACCTGGAACCCAGAGAAGGCTGCCAGC...ATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | AATGGCATCACAAACACGCAGCATCTAACAACAGGAAACAGCAAGGGTAGAAACCCTCCAGCTCCACACTaGATGCCCGCAGCAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGITNTQHLTTGNSKGRNPPAPH*MPAASH Trigger: ATGACTTGCTGCGGGCATCCAGTGTGGAGCTGGAGG...GTTTCTACCCTTGCTGTTTCCTGTTGTTAGATGCTGCGTGTTTGTGATGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR TCA 90 bp | GAAGTAAAACTTGGAAACACACAAATACTCACTAGTGCTCAGGGATCAAATGATGTCGGCACAGGCAAGTaGCCCCGCACAGCGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVKLGNTQILTSAQGSNDVGTGK*PRTAQG Trigger: TCCTTGCGCTGTGCGGGGTCACTTGCCTGTGCCGAC...ATCATTTGATCCCTGAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCCAGGTTGTGTGCAGCTaGCGCTTCTTCAGAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVQVVCS*RFFRAV Trigger: GACAGCTCTGAAGAAGCGGCAGCTGCACACAACCTG...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGAAAATTCAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGCGGAAGTGGAGTTTaGGGGCCTGGTTCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKFNCGRQGLLKLAEVHGGSGV*GPGSSW Trigger: CCAGCTGGAACCAGGCCCCCAAACTCCACTTCCGCC...ATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| 3UTR CAA 72 bp | CAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTaGGAGAAGAAGCACAGCCAACGGAGGAGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSNISEQFTEEV*EKKHSQRRSQE Trigger: TTCCTGGCTCCTCCGTTGGCTGTGCTTCTTCTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGAACCCCTTCTTGGGGTaGATGTGTCGGCACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VFGSQSNISEQFTEEVLENPFLG*MCRHRQ Trigger: TTGCCTGTGCCGACACATGCACCCCAAGAAGGGGTT...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGATCTCCAACCACAGAATTGTTCTCATTGCTACTTTGTAACTGTAATTTCTGGGCCTGGGGGCTaGCAGGTGCAGCAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGDLQPQNCSHCYFVTVISGPGG*QVQQTP Trigger: AGGAGTCTGCTGCACCTGCCAGCCCCCAGGCCCAGA...AATTACAGTTACAAAGTAGCAATGAGAACAATTCTGTGGTTGGAGATCACCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CCA 90 bp | TTCATCTACCTCCTCATTTACATAGCCAGATGGAACAAGCCAAGCTCAGAGCTAATGGCTCCTTTGCTGTaGTCTTCAGCTCACCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FIYLLIYIARWNKPSSELMAPLL*SSAHPT Trigger: AGTGGGGTGAGCTGAAGACCACAGCAAAGGAGCCAT...TAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CCA 90 bp | ATGCCTCTTGCTTACCTCCTGAAGCTGGACTGGCAAGCTCCCATGACATTGGTGTTGGATTGGTTGGAGTaGAGGTTCTTAGCTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: MPLAYLLKLDWQAPMTLVLDWLE*RFLALI Trigger: GATTAAAGCTAAGAACCTCCACTCCAACCAATCCAA...CACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGAGGTAAGCAAGAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR TCA 90 bp | ACTGGAGGGAGGCATGTTATCAAGAGACCACGTTTTCTCTTTAAAGTTCATCTATCAACTACACCGTTCTaGGGACGGATGGACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGGRHVIKRPRFLFKVHLSTTPF*GRMDSS Trigger: GGAGCTGTCCATCCGTCCTCAGAACGGTGTAGTTGA...TAGATGAACTTTAAAGAGAAAACGTGGTCTCTTGATAACATGCCTCCCTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR TCA 90 bp | CAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGGTGTTTGATGGTTCCAGGTCTCCATaGCACAGACATCCTCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: QLWSSRFIEVGRGSWVFDGSRSP*HRHPQL Trigger: TAGTTGAGGATGTCTGTGTCATGGAGACCTGGAACC...ATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR TCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCGTTTCAAGGTCACCTTaGCAGACACATCCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVVSRSP*QTHPCP Trigger: TGGGCAAGGATGTGTCTGTCAAGGTGACCTTGAAAC...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR TCA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGCCGGTAGCTCAAACATaGTCATCTCGTTCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: VFGSQSNISEQFTEEVLEPVAQT*SSRSTR Trigger: CCGTGTGGAACGAGATGATCATGTTTGAGCTACCGG...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR GCA 90 bp | TTTGGTGATCTCCAACCACAGAATTGTTCTCATTGCTACTTTGTAACTGTAATTCTGGGGGCTGGCAGGTaGAGCAGACTCCTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGDLQPQNCSHCYFVTVILGAGR*SRLLCG Trigger: ACCACAGAGGAGTCTGCTGCACCTGCCAGCCCCCAG...AATTACAGTTACAAAGTAGCAATGAGAACAATTCTGTGGTTGGAGATCACCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR GCA 90 bp | ACTGGAGGGAGGCATGTTATCAAGAGACCACGTTTTCTCTTTAAAGTTCATCTACTTCAGAGCTGTCTGTaGCTCCACAGAGCCGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGGRHVIKRPRFLFKVHLLQSCL*LHRAGL Trigger: AAGACCGGCTCTGTGGAGGCACAGACAGCTCTGAAG...TAGATGAACTTTAAAGAGAAAACGTGGTCTCTTGATAACATGCCTCCCTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CCA 90 bp | TTTGGTGATCTCCAACCACAGAATTGTTCTCATTGCTACTTTGTAACTGTAATTTGGAGTTTGGGGGCCTaGTTCCAGCTGGCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGDLQPQNCSHCYFVTVIWSLGA*FQLAAF Trigger: GAAGGCTGCCAGCTGGAACCAGGCCCCCAAACTCCA...AATTACAGTTACAAAGTAGCAATGAGAACAATTCTGTGGTTGGAGATCACCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CCA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCAGCAGCTCCTTGGATTaGTTGGAGTGGAGGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVSSSLD*LEWRFL Trigger: TAAGAACCTCCACTCCAACCAATCCAAGGAGCTGCT...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR TCA 90 bp | TTTGGTGATCTCCAACCACAGAATTGTTCTCATTGCTACTTTGTAACTGTAATTCGTTCCACACGGGGTTaGTCTTGTGCTTGGCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGDLQPQNCSHCYFVTVIRSTRG*SCAWPV Trigger: AACGGGCCAAGCACAAGATCAACCCCGTGTGGAACG...AATTACAGTTACAAAGTAGCAATGAGAACAATTCTGTGGTTGGAGATCACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR GCA 90 bp | GAAGTAAAACTTGGAAACACACAAATACTCACTAGTGCTCAGGGATCAAATGATTCCTCCCAGGTTGTGTaGAGCTGCCGCTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVKLGNTQILTSAQGSNDSSQVV*SCRFFR Trigger: TCTGAAGAAGCGGCAGCTGCACACAACCTGGGAGGA...ATCATTTGATCCCTGAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CCA 90 bp | AGAAGAAAATTCAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATCAGCAGACTCCTCTGTaGTCTCCAAGGTGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKFNCGRQGLLKLAEVHQQTPL*SPRCSL Trigger: CAGACTACACCTTGGAGACCACAGAGGAGTCTGCTG...ATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CAA 72 bp | AACCAGACATGTGACCACGATGTCTCATGCGACTTTTaGTGCTTTTATGTGGAATGGCATCACAAACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQTCDHDVSCDF*CFYVEWHHKHA Trigger: TGCGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATCGTGGTCACATGTCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR GCA 90 bp | TTTGGTGATCTCCAACCACAGAATTGTTCTCATTGCTACTTTGTAACTGTAATTCTCCAAGGTGTAGTCTaGGTAGTTGATGACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGDLQPQNCSHCYFVTVILQGVV*VVDDFW Trigger: CCAGAAGTCATCAACTACGCAGACTACACCTTGGAG...AATTACAGTTACAAAGTAGCAATGAGAACAATTCTGTGGTTGGAGATCACCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CAA 72 bp | AGAAAATTCAACTGTGGTCGTCAAGGTTTATTGAAGTaGGCAGAGGTTCATGGGTGTTTGATACACGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RKFNCGRQGLLK*AEVHGCLIHEI Trigger: AATCTCGTGTATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| 3UTR CAA 72 bp | ACAAGAAGAAAATTCAACTGTGGTCGTCAAGGTTTATaGAAGTTGGCAGAGGTTCATGGGTGTTTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: TRRKFNCGRQGL*KLAEVHGCLIH Trigger: GTGTATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | CAGTGGCTGCGCTCAGAGCCCGAGGCATGCAGGCCTAGGCTGCAGTaGCCCAGCTCGCAGCTCGGCCCCTCCTCGCCCTGGCCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QWLRSEPEACRPRLQ*PSSQLGPSSPWPST Trigger: GGTGCTGGGCCAGGGCGAGGAGGGGCCGAGCTGCGAGCTGGGCCACTGCAGCCTAGGCCTGCATGCCTCGGGCTCTGAGCGCAGCCACTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS GCA 90 bp | GCTGGCAGGTGCAGCAGACTCCTCTGTGGTCTCCAAGGTGTAGTCTaGGTAGTTGATGACTTCTGGGGCCGTCACGGCTGGCCGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AGRCSRLLCGLQGVV*VVDDFWGRHGWPGT Trigger: GGTCCCCGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGACTACACCTTGGAGACCACAGAGGAGTCTGCTGCACCTGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | AGCTCCTCTGTGACCTGCCTCTTGAGGCGACTGTCACTCTGGGCCTaGGGGCTGGCAGGTGCAGCAGACTCCTCTGTGGTCTCCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSVTCLLRRLSLWA*GLAGAADSSVVSKV Trigger: CACCTTGGAGACCACAGAGGAGTCTGCTGCACCTGCCAGCCCCCAGGCCCAGAGTGACAGTCGCCTCAAGAGGCAGGTCACAGAGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 90 bp | TGGACAGGCTCCGTGGACTTTTTAATGTTGAACTGTTGGGCCGCCTaGAGCACACCGGGCCTTGCCTTCTCCGGGTCGGGCTCACGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WTGSVDFLMLNCWAA*STPGLAFSGSGSRS Trigger: GGACCGTGAGCCCGACCCGGAGAAGGCAAGGCCCGGTGTGCTTCAGGCGGCCCAACAGTTCAACATTAAAAAGTCCACGGAGCCTGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | ACAGATGCTCCATCCAGGCCCAGGCGGAGTTCCCCAATCACACTATaGCGGGAGAAGCGGTCACAGGTGCGCAGGGTGAGTGTCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TDAPSRPRRSSPITL*REKRSQVRRVSVRV Trigger: TACCCTGACACTCACCCTGCGCACCTGTGACCGCTTCTCCCGCCATAGTGTGATTGGGGAACTCCGCCTGGGCCTGGATGGAGCATCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 90 bp | AATCAGCACCACCAGGAGGCGATTGGCAGCTGGGAGGTAGCTGATTaGCAGAAGGACCTCCCCGGCCCCTGCAGATGGCTCCTTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NQHHQEAIGSWEVAD*QKDLPGPCRWLLCC Trigger: ACAGCAAAGGAGCCATCTGCAGGGGCCGGGGAGGTCCTTCTGTCAATCAGCTACCTCCCAGCTGCCAATCGCCTCCTGGTGGTGCTGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS GCA 90 bp | CTCCTCCCAGGTTGTGTGCAGCTGCCGCTTCTTCAGAGCTGTCTGTaGCTCCACAGAGCCGGTCTTGACAGCCACGCTGCCTTGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLPGCVQLPLLQSCL*LHRAGLDSHAALDV Trigger: TACATCCAAGGCAGCGTGGCTGTCAAGACCGGCTCTGTGGAGGCACAGACAGCTCTGAAGAAGCGGCAGCTGCACACAACCTGGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | CAAGGTGTAGTCTGCGTAGTTGATGACTTCTGGGGCCGTCACGGCTaGCCGGGGACCATAGATGTCCGGGAACTTAAGGAGAGGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGVVCVVDDFWGRHG*PGTIDVRELKERSG Trigger: CCCCGACCTCTCCTTAAGTTCCCGGACATCTATGGTCCCCGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGACTACACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | CTCCTCTGTGGTCTCCAAGGTGTAGTCTGCGTAGTTGATGACTTCTaGGGCCGTCACGGCTGGCCGGGGACCATAGATGTCCGGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLCGLQGVVCVVDDF*GRHGWPGTIDVREL Trigger: AAGTTCCCGGACATCTATGGTCCCCGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGACTACACCTTGGAGACCACAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 90 bp | GCTGCCGCTTCTTCAGAGCTGTCTGTGCCTCCACAGAGCCGGTCTTaGCAGCCACGCTGCCTTGGATGTAACAGTCACAGCCTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AAASSELSVPPQSRS*QPRCLGCNSHSLLH Trigger: ATGAAGGAGGCTGTGACTGTTACATCCAAGGCAGCGTGGCTGTCAAGACCGGCTCTGTGGAGGCACAGACAGCTCTGAAGAAGCGGCAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | GTCTTGGTGGACAAACACTCAACAAATAGATGCCTAGTTGTCCTGGGGAGAGGAGAAGCACACCGGGCCTaGCCTTCTCCGGGTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLVDKHSTNRCLVVLGRGEAHRA*PSPGRA Trigger: AGCCCGACCCGGAGAAGGCAAGGCCCGGTGTGCTTC...TCCTCTCCCCAGGACAACTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | GCCCGCCTGAACAGCAGTCCCGGACTCCTCTTATCTGATGTTTCCGTTAAGGTGGACAGCCACGCTGCCTaGGATGTAACAGTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARLNSSPGLLLSDVSVKVDSHAA*DVTVTA Trigger: GGCTGTGACTGTTACATCCAAGGCAGCGTGGCTGTC...CACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGTTCAGGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | TTGACAGACACATCCTTGCCCAGCAGCTCCTTGGATTGGTTGGAGTaGAGGTTCTTAGCTTTAATCAGCACCACCAGGAGGCGATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTDTSLPSSSLDWLE*RFLALISTTRRRLA Trigger: TGCCAATCGCCTCCTGGTGGTGCTGATTAAAGCTAAGAACCTCCACTCCAACCAATCCAAGGAGCTGCTGGGCAAGGATGTGTCTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 90 bp | AAGGTCACCTTGACAGACACATCCTTGCCCAGCAGCTCCTTGGATTaGTTGGAGTGGAGGTTCTTAGCTTTAATCAGCACCACCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTLTDTSLPSSSLD*LEWRFLALISTTRR Trigger: CCTCCTGGTGGTGCTGATTAAAGCTAAGAACCTCCACTCCAACCAATCCAAGGAGCTGCTGGGCAAGGATGTGTCTGTCAAGGTGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 90 bp | CGCTGCCTTGGATGTAACAGTCACAGCCTCCTTCATGGTCACTGGTaGCAGCTTCCAGGCTTGTCACAAATAACTCAGCCTTCTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCLGCNSHSLLHGHW*QLPGLSQITQPSSG Trigger: ACCAGAAGAAGGCTGAGTTATTTGTGACAAGCCTGGAAGCTGTCACCAGTGACCATGAAGGAGGCTGTGACTGTTACATCCAAGGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | ACCACTGTAAGATTTTGTGCTCCAAAGTGTAACCAGACATGTGACCACGATGTCTCTGTGACCTGCCTCTaGAGGCGACTGTCACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTVRFCAPKCNQTCDHDVSVTCL*RRLSLW Trigger: CCAGAGTGACAGTCGCCTCAAGAGGCAGGTCACAGA...GACATCGTGGTCACATGTCTGGTTACACTTTGGAGCACAAAATCTTACAGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | ACTGGAGGGAGGCATGTTATCAAGAGACCACGTTTTCTCTTTAAAGTTCATCTAAGGCGGAAGTGGAGTTaGGGGGCCTGGTTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGGRHVIKRPRFLFKVHLRRKWS*GAWFQL Trigger: CAGCTGGAACCAGGCCCCCAAACTCCACTTCCGCCT...TAGATGAACTTTAAAGAGAAAACGTGGTCTCTTGATAACATGCCTCCCTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | CAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGGTGTTTGATTCGTTCCACACGGGGTaGATCTTGTGCTTGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QLWSSRFIEVGRGSWVFDSFHTG*ILCLAR Trigger: ACGGGCCAAGCACAAGATCAACCCCGTGTGGAACGA...ATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 90 bp | TTGATCTTGTGCTTGGCCCGTTTTGTCTGTTTCTTCTTCAGCTTCTaGGCCTGGTGTTTCAAGGTCACCTTGACAGACACATCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LILCLARFVCFFFSF*AWCFKVTLTDTSLP Trigger: GGGCAAGGATGTGTCTGTCAAGGTGACCTTGAAACACCAGGCTCAGAAGCTGAAGAAGAAACAGACAAAACGGGCCAAGCACAAGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAATTCAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGCAGCAACCCCTTCTaGGGGTGCATGTGTCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRKFNCGRQGLLKLAEVHGSNPF*GCMCRH Trigger: GTGCCGACACATGCACCCCAAGAAGGGGTTGCTGCC...ATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | AACAGCAAGGGTAGAAACACTGCACAGGACCAACTTTCTCCTCCAAAGATTCCCAGCTCCTTGGATTGGTaGGAGTGGAGGTTCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSKGRNTAQDQLSPPKIPSSLDW*EWRFLA Trigger: AGCTAAGAACCTCCACTCCAACCAATCCAAGGAGCT...GGGAATCTTTGGAGGAGAAAGTTGGTCCTGTGCAGTGTTTCTACCCTTGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGCTGCAGATGGCTCCTTaGCTGTGGTCTTCAGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFGSQSNISEQFTEEVLELQMAP*LWSSAH Trigger: GTGAGCTGAAGACCACAGCAAAGGAGCCATCTGCAG...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | ACTGGAGGGAGGCATGTTATCAAGAGACCACGTTTTCTCTTTAAAGTTCATCTATTGCCCAGCAGCTCCTaGGATTGGTTGGAGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGRHVIKRPRFLFKVHLLPSSS*DWLEWR Trigger: CCTCCACTCCAACCAATCCAAGGAGCTGCTGGGCAA...TAGATGAACTTTAAAGAGAAAACGTGGTCTCTTGATAACATGCCTCCCTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGCACACGGGGTTGATCTaGTGCTTGGCCCGTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFGSQSNISEQFTEEVLEHTGLI*CLARFV Trigger: GACAAAACGGGCCAAGCACAAGATCAACCCCGTGTG...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS-3UTR CAA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGCAGCAGCTCCTTGGATaGGTTGGAGTGGAGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFGSQSNISEQFTEEVLEQQLLG*VGVEVL Trigger: AAGAACCTCCACTCCAACCAATCCAAGGAGCTGCTG...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGGTTCCCAGTCTAACATCTCTGAGCAATTTACAGAGGAGGTTTTGGAGTGTTTCAAGGTCACCTaGACAGACACATCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VFGSQSNISEQFTEEVLECFKVT*TDTSLP Trigger: GGGCAAGGATGTGTCTGTCAAGGTGACCTTGAAACA...CTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CAA 90 bp | GAAGTAAAACTTGGAAACACACAAATACTCACTAGTGCTCAGGGATCAAATGATTTGACAGACACATCCTaGCCCAGCAGCTCCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EVKLGNTQILTSAQGSNDLTDTS*PSSSLD Trigger: ATCCAAGGAGCTGCTGGGCAAGGATGTGTCTGTCAA...ATCATTTGATCCCTGAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGAAAATTCAACTGTGGTCGTCAAGGTTTATTGAAGTTGGCAGAGGTTCATGGGTTGATCTTGTGCTaGGCCCGTTTTGTCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRKFNCGRQGLLKLAEVHGLILC*ARFVCF Trigger: GAAACAGACAAAACGGGCCAAGCACAAGATCAACCC...ATGAACCTCTGCCAACTTCAATAAACCTTGACGACCACAGTTGAATTTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS CCA 72 bp | CGCTCAGAGCCCGAGGCATGCAGGCCTAGGCTGCAGTaGCCCAGCTCGCAGCTCGGCCCCTCCTCGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSEPEACRPRLQ*PSSQLGPSSPW Trigger: CCAGGGCGAGGAGGGGCCGAGCTGCGAGCTGGGCCACTGCAGCCTAGGCCTGCATGCCTCGGGCTCTGAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
||
| CDS GCA 72 bp | GTTGAACTGTTGGGCCGCCTGAAGCACACCGGGCCTTaGCTTCTCCGGGTCGGGCTCACGGTCCCGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VELLGRLKHTGP*LLRVGLTVPRQ Trigger: CTGCCGCGGGACCGTGAGCCCGACCCGGAGAAGGCAAGGCCCGGTGTGCTTCAGGCGGCCCAACAGTTCAAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 72 bp | CGCACAGCGCAAGGATGCTGGTGGCAGTGCCCAGCGTaGCGCCCAGCGCGATCACAGGCACCGACAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RTAQGCWWQCPA*RPARSQAPTAP Trigger: TGGTGCTGTCGGTGCCTGTGATCGCGCTGGGCGCCACGCTGGGCACTGCCACCAGCATCCTTGCGCTGTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS GCA 72 bp | ATCTCCTCCCAGTGGCTGCGCTCAGAGCCCGAGGCATaGAGGCCTAGGCTGCAGTGGCCCAGCTCGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ISSQWLRSEPEA*RPRLQWPSSQL Trigger: GAGCTGCGAGCTGGGCCACTGCAGCCTAGGCCTGCATGCCTCGGGCTCTGAGCGCAGCCACTGGGAGGAGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 72 bp | GCACCACCAGGAGGCGATTGGCAGCTGGGAGGTAGCTaGTTGACAGAAGGACCTCCCCGGCCCCTGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: APPGGDWQLGGS*LTEGPPRPLQM Trigger: CATCTGCAGGGGCCGGGGAGGTCCTTCTGTCAATCAGCTACCTCCCAGCTGCCAATCGCCTCCTGGTGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 72 bp | CCATCCAGGCCCAGGCGGAGTTCCCCAATCACACTATaGCGGGAGAAGCGGTCACAGGTGCGCAGGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PSRPRRSSPITL*REKRSQVRRVS Trigger: ACTCACCCTGCGCACCTGTGACCGCTTCTCCCGCCATAGTGTGATTGGGGAACTCCGCCTGGGCCTGGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 90 bp | AGGTCGGGGCTGGACAGGCTCCGTGGACTTTTTAATGTTGAACTGTaGGGCCGCCTGAAGCACACCGGGCCTTGCCTTCTCCGGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RSGLDRLRGLFNVEL*GRLKHTGPCLLRVG Trigger: CCCGACCCGGAGAAGGCAAGGCCCGGTGTGCTTCAGGCGGCCCAACAGTTCAACATTAAAAAGTCCACGGAGCCTGTCCAGCCCCGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS GCA 72 bp | GGTTGTGTGCAGCTGCCGCTTCTTCAGAGCTGTCTGTaGCTCCACAGAGCCGGTCTTGACAGCCACGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GCVQLPLLQSCL*LHRAGLDSHAA Trigger: GGCAGCGTGGCTGTCAAGACCGGCTCTGTGGAGGCACAGACAGCTCTGAAGAAGCGGCAGCTGCACACAACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 72 bp | TCCGTGGACTTTTTAATGTTGAACTGTTGGGCCGCCTaGAGCACACCGGGCCTTGCCTTCTCCGGGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SVDFLMLNCWAA*STPGLAFSGSG Trigger: GCCCGACCCGGAGAAGGCAAGGCCCGGTGTGCTTCAGGCGGCCCAACAGTTCAACATTAAAAAGTCCACGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 72 bp | GTCTGCGTAGTTGATGACTTCTGGGGCCGTCACGGCTaGCCGGGGACCATAGATGTCCGGGAACTTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VCVVDDFWGRHG*PGTIDVRELKE Trigger: CTCCTTAAGTTCCCGGACATCTATGGTCCCCGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 72 bp | GGTCTCCAAGGTGTAGTCTGCGTAGTTGATGACTTCTaGGGCCGTCACGGCTGGCCGGGGACCATAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: GLQGVVCVVDDF*GRHGWPGTIDV Trigger: GACATCTATGGTCCCCGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGACTACACCTTGGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 72 bp | CCTTCTTCTGGTCATAGTCCAGGCGGAAGTGGAGTTTaGGGGCCTGGTTCCAGCTGGCAGCCTTCTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSSGHSPGGSGV*GPGSSWQPSLG Trigger: ACCCAGAGAAGGCTGCCAGCTGGAACCAGGCCCCCAAACTCCACTTCCGCCTGGACTATGACCAGAAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 90 bp | AGCTGTCTGTGCCTCCACAGAGCCGGTCTTGACAGCCACGCTGCCTaGGATGTAACAGTCACAGCCTCCTTCATGGTCACTGGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SCLCLHRAGLDSHAA*DVTVTASFMVTGDS Trigger: GCTGTCACCAGTGACCATGAAGGAGGCTGTGACTGTTACATCCAAGGCAGCGTGGCTGTCAAGACCGGCTCTGTGGAGGCACAGACAGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS GCA 72 bp | TGCAGCAGACTCCTCTGTGGTCTCCAAGGTGTAGTCTaGGTAGTTGATGACTTCTGGGGCCGTCACGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSRLLCGLQGVV*VVDDFWGRHGW Trigger: CCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGACTACACCTTGGAGACCACAGAGGAGTCTGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 72 bp | CTGGACAGGCTCCGTGGACTTTTTAATGTTGAACTGTaGGGCCGCCTGAAGCACACCGGGCCTTGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LDRLRGLFNVEL*GRLKHTGPCLL Trigger: GAGAAGGCAAGGCCCGGTGTGCTTCAGGCGGCCCAACAGTTCAACATTAAAAAGTCCACGGAGCCTGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 90 bp | GTCACCTTGACAGACACATCCTTGCCCAGCAGCTCCTTGGATTGGTaGGAGTGGAGGTTCTTAGCTTTAATCAGCACCACCAGGAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: VTLTDTSLPSSSLDW*EWRFLALISTTRRR Trigger: TCGCCTCCTGGTGGTGCTGATTAAAGCTAAGAACCTCCACTCCAACCAATCCAAGGAGCTGCTGGGCAAGGATGTGTCTGTCAAGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 72 bp | GGATGTAACAGTCACAGCCTCCTTCATGGTCACTGGTaGCAGCTTCCAGGCTTGTCACAAATAACTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GCNSHSLLHGHW*QLPGLSQITQP Trigger: AGGCTGAGTTATTTGTGACAAGCCTGGAAGCTGTCACCAGTGACCATGAAGGAGGCTGTGACTGTTACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CCA 72 bp | TTGACAGACACATCCTTGCCCAGCAGCTCCTTGGATTaGTTGGAGTGGAGGTTCTTAGCTTTAATCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LTDTSLPSSSLD*LEWRFLALIST Trigger: GGTGCTGATTAAAGCTAAGAACCTCCACTCCAACCAATCCAAGGAGCTGCTGGGCAAGGATGTGTCTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS TCA 72 bp | TGCTTGGCCCGTTTTGTCTGTTTCTTCTTCAGCTTCTaGGCCTGGTGTTTCAAGGTCACCTTGACAGACACA | + |
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Preference number: 6 (lower is better) Translates to: CLARFVCFFFSF*AWCFKVTLTDT Trigger: TGTGTCTGTCAAGGTGACCTTGAAACACCAGGCTCAGAAGCTGAAGAAGAAACAGACAAAACGGGCCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 72 bp | GGTAGCTCAAACATGATCATCTCGTTCCACACGGGGTaGATCTTGTGCTTGGCCCGTTTTGTCTGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSSNMIISFHTG*ILCLARFVCFF Trigger: GAAGAAACAGACAAAACGGGCCAAGCACAAGATCAACCCCGTGTGGAACGAGATGATCATGTTTGAGCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 90 bp | AAGTCATCCGGTAGCTCAAACATGATCATCTCGTTCCACACGGGGTaGATCTTGTGCTTGGCCCGTTTTGTCTGTTTCTTCTTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSSGSSNMIISFHTG*ILCLARFVCFFFSF Trigger: GAAGCTGAAGAAGAAACAGACAAAACGGGCCAAGCACAAGATCAACCCCGTGTGGAACGAGATGATCATGTTTGAGCTACCGGATGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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| CDS CAA 72 bp | TCAAACATGATCATCTCGTTCCACACGGGGTTGATCTaGTGCTTGGCCCGTTTTGTCTGTTTCTTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNMIISFHTGLI*CLARFVCFFFS Trigger: GCTGAAGAAGAAACAGACAAAACGGGCCAAGCACAAGATCAACCCCGTGTGGAACGAGATGATCATGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028648.3 |
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