Pregenerated sensors for SYT12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049303Ensembl transcript IDs: ENSMUST00000059295.10
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGGAGGTGGGGCAGCCCTGGTGTTCACAGCTCCAGCTGGCTATaGAGAGGGCATCGCTGGATAGAACTGAGATGGTGCCAGGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PRRWGSPGVHSSSWL*RGHRWIELRWCQAP Trigger: AGGAGCCTGGCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAGCCAGCTGGAGCTGTGAACACCAGGGCTGCCCCACCTCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR GCA 90 bp | TCCAGCTGGCTATGGAGAGGGCATCGCTGGATAGAACTGAGATGGTaGCAGGCTCCTGAGGCTCTGATGCCCAACCTGGCCTGCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SSWLWRGHRWIELRW*QAPEALMPNLACSG Trigger: GCCAGAGCAGGCCAGGTTGGGCATCAGAGCCTCAGGAGCCTGGCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAGCCAGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | AGCTCCAGCTGGCTATGGAGAGGGCATCGCTGGATAGAACTGAGATaGTGCCAGGCTCCTGAGGCTCTGATGCCCAACCTGGCCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SSSWLWRGHRWIELR*CQAPEALMPNLACS Trigger: AGAGCAGGCCAGGTTGGGCATCAGAGCCTCAGGAGCCTGGCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAGCCAGCTGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | GGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTACTaGCTTCTGTTGGGCCTGGTCTCCTGGCCTCTTCTTGTGTCCACT | + |
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Preference number: 1 (lower is better) Translates to: GSLRVDGQGSLHTAY*LLLGLVSWPLLVST Trigger: AGTGGACACAAGAAGAGGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | GGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTaGCCTCTTCTTGTGTCCACTGTAGTGGGCAGAGTCTGTGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GSLHTAYWLLLGLVS*PLLVSTVVGRVCVW Trigger: CCAAACACAGACTCTGCCCACTACAGTGGACACAAGAAGAGGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | CTTTGGATCCACACAAGGATCTGGACCTGGGCCACTGGGGACTTCTaGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: LWIHTRIWTWATGDF*FPQSGWSGEPSYGL Trigger: TAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCCAGTGGCCCAGGTCCAGATCCTTGTGTGGATCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR TCA 90 bp | TCCCTGCAAAGCCATTGGATTAGAAAGAGTCTGGGGGCTTCCAGATaGCAAGGCCTGGCCCAGCCACCACTATCCCTGGCCCGTTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: SLQSHWIRKSLGASR*QGLAQPPLSLARFH Trigger: GTGAAAACGGGCCAGGGATAGTGGTGGCTGGGCCAGGCCTTGTCATCTGGAAGCCCCCAGACTCTTTCTAATCCAATGGCTTTGCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR GCA 90 bp | GAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTaGTTTGGATCCACACAAGGATCTGGACCTGGGCCACTGGGGACT | + |
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Preference number: 1 (lower is better) Translates to: EGREPTLVSVESVLI*FGSTQGSGPGPLGT Trigger: AGTCCCCAGTGGCCCAGGTCCAGATCCTTGTGTGGATCCAAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | AGCCACACCCATTCTTCCATGACAGTCTGGACAGAGGATCCAAGATaGCTGATGAGAAATCCCCCAGGAGGTGGGGCAGCCCTGGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SHTHSSMTVWTEDPR*LMRNPPGGGAALVF Trigger: GAACACCAGGGCTGCCCCACCTCCTGGGGGATTTCTCATCAGCCATCTTGGATCCTCTGTCCAGACTGTCATGGAAGAATGGGTGTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | CTGGGTCCCCGGATGAAGAGCCACACCCATTCTTCCATGACAGTCTaGACAGAGGATCCAAGATGGCTGATGAGAAATCCCCCAGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: LGPRMKSHTHSSMTV*TEDPRWLMRNPPGG Trigger: ACCTCCTGGGGGATTTCTCATCAGCCATCTTGGATCCTCTGTCCAGACTGTCATGGAAGAATGGGTGTGGCTCTTCATCCGGGGACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | GTCTGTGGAATCTGTGCTGATTTGCTTTGGATCCACACAAGGATCTaGACCTGGGCCACTGGGGACTTCTGGTTCCCTCAGAGTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: VCGICADLLWIHTRI*TWATGDFWFPQSGW Trigger: CCATCCACTCTGAGGGAACCAGAAGTCCCCAGTGGCCCAGGTCCAGATCCTTGTGTGGATCCAAAGCAAATCAGCACAGATTCCACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | CACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCTGCCGTGGTaGTACACACCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: HAHCPFKSSGSSLPW*YTPLIPALGRQRQA Trigger: TGCCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | TCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCTGCCGTaGTGGTACACACCTTTAATTCCAGCACTTGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SHAHCPFKSSGSSLP*WYTPLIPALGRQRQ Trigger: CTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR TCA 90 bp | CAGGGTGAGAAGCTTCAGTGGGTCCAGCTGTGGCTGGTGTCCTGTTaGCCTGTGTCCCTATTCTATCTGCCCTTCTCCTTATCATTGACC | + |
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Preference number: 1 (lower is better) Translates to: QGEKLQWVQLWLVSC*PVSLFYLPFSLSLT Trigger: GGTCAATGATAAGGAGAAGGGCAGATAGAATAGGGACACAGGTCAACAGGACACCAGCCACAGCTGGACCCACTGAAGCTTCTCACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | AGGGACATACTTCCTAAGGCTCTTCAATACAGTAGGTCAGTCTGGTaGGTCCCCAGCCAGCTACAGGTAGACCTCAGTGGGGAAATTACC | + |
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Preference number: 1 (lower is better) Translates to: RDILPKALQYSRSVW*VPSQLQVDLSGEIT Trigger: GGTAATTTCCCCACTGAGGTCTACCTGTAGCTGGCTGGGGACCCACCAGACTGACCTACTGTATTGAAGAGCCTTAGGAAGTATGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | CCAAGGGACATACTTCCTAAGGCTCTTCAATACAGTAGGTCAGTCTaGTGGGTCCCCAGCCAGCTACAGGTAGACCTCAGTGGGGAAATT | + |
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Preference number: 1 (lower is better) Translates to: PRDILPKALQYSRSV*WVPSQLQVDLSGEI Trigger: AATTTCCCCACTGAGGTCTACCTGTAGCTGGCTGGGGACCCACCAGACTGACCTACTGTATTGAAGAGCCTTAGGAAGTATGTCCCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR TCA 90 bp | ACTCGGTGCCAGCATGAGAGAGGGCATCTTGGGTTCCTGGCATCCTaGGTGCTATGTCTTGTTAATATTAGCCTTGCCACCACAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: TRCQHERGHLGFLAS*VLCLVNISLATTGT Trigger: AGTTCCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR GCA 90 bp | GGTGCCAGCATGAGAGAGGGCATCTTGGGTTCCTGGCATCCTGAGTaGTATGTCTTGTTAATATTAGCCTTGCCACCACAGGAACTATCC | + |
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Preference number: 1 (lower is better) Translates to: GASMREGILGSWHPE*YVLLILALPPQELS Trigger: GGATAGTTCCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | GGGTTGTTACTCGGTGCCAGCATGAGAGAGGGCATCTTGGGTTCCTaGCATCCTGAGTGCTATGTCTTGTTAATATTAGCCTTGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: GLLLGASMREGILGS*HPECYVLLILALPP Trigger: TGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACCGAGTAACAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | AGATTTATTAACAGCTGTCCTCTAGGAGAATGGCAGAAGGGGAGTTaGCAAGTTCTGAAGCCCACATCCTTCTGCAGGCCAAGGGACATA | + |
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Preference number: 1 (lower is better) Translates to: RFINSCPLGEWQKGS*QVLKPTSFCRPRDI Trigger: TATGTCCCTTGGCCTGCAGAAGGATGTGGGCTTCAGAACTTGCCAACTCCCCTTCTGCCATTCTCCTAGAGGACAGCTGTTAATAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CCA 90 bp | GGAACTATCCCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATaGCAGAAGGGGAGTTGGCAAGTTCTGAAGCCCACATCCTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GTIPSRFINSCPLGE*QKGSWQVLKPTSFC Trigger: GCAGAAGGATGTGGGCTTCAGAACTTGCCAACTCCCCTTCTGCCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGGGATAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR GCA 90 bp | TCTGACCAAAGAACGATTCTGGTAGTGGTGTACAACCAAGCCCTTTaGTTAGGAACACCATTTCCCCAGAGTTCCTACTGGCTCAAGACT | + |
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Preference number: 1 (lower is better) Translates to: SDQRTILVVVYNQAL*LGTPFPQSSYWLKT Trigger: AGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGCTTGGTTGTACACCACTACCAGAATCGTTCTTTGGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGAGGCTCCTGAGGCTCTaGTGCCCAACCTGGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: WSGEPSYGLLASVGPGLLRLLRL*CPTWPA Trigger: AGCAGGCCAGGTTGGGCATCAGAGCCTCAGGAGCCT...CAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CAA 90 bp | GTTACCCCACCCCTCAGGGCTCCTTCCCAAGTTCATCTGCCCGGGTaGTTACTCGGTGCCAGCATGAGAGAGGGCATCTTGGGTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VTPPLRAPSQVHLPG*LLGASMREGILGSW Trigger: CCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACCGAGTAACAACCCGGGCAGATGAACTTGGGAAGGAGCCCTGAGGGGTGGGGTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGGCCAGCTCCAGCTGGCTATaGAGAGGGCATCGCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: SGEPSYGLLASVGPGLLASSSWL*RGHRWI Trigger: TATCCAGCGATGCCCTCTCCATAGCCAGCTGGAGCT...GGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CAA 90 bp | AGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTaGGGCCTGGTCTCCTGGCCTCTTCTTGTGTCCACTGTAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RVDGQGSLHTAYWLL*GLVSWPLLVSTVVG Trigger: GCCCACTACAGTGGACACAAGAAGAGGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGACCATCCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CAA 90 bp | CAAGGCCTGGCCCAGCCACCACTATCCCTGGCCCGTTTTCACCTCTaGAATATTGGCCACAGGGTGAGAAGCTTCAGTGGGTCCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: QGLAQPPLSLARFHL*NIGHRVRSFSGSSC Trigger: ACAGCTGGACCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGATAGTGGTGGCTGGGCCAGGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTCTGACCACTCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCATGGTGCCAGGCTCCTaGGGCTCTGATGCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: PLLTTPTPTALLNLQVRVMVPGS*GSDAQP Trigger: AGGTTGGGCATCAGAGCCTCAGGAGCCTGGCACCAT...GACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGAGTGGTCAGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTTGAATATTGGCCACAGGGTGAGAAGCTTCAGTGGGTCCAGCTGTGGCGGCTTCTGTTGGGCCTaGTCTCCTGGCCTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: HLLNIGHRVRSFSGSSCGGFCWA*SPGLFL Trigger: CAAGAAGAGGCCAGGAGACCAGGCCCAACAGAAGCC...GCCACAGCTGGACCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTCTGACCACTCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCAGTAGGTCAGTCTGGTaGGTCCCCAGCCAGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: PLLTTPTPTALLNLQVRVSRSVW*VPSQLQ Trigger: CTGTAGCTGGCTGGGGACCCACCAGACTGACCTACT...GACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGAGTGGTCAGAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTTGCTTAGGAACACCATTTCCCCAGAGTTCCTACTGGCTCAAGACTAAGCCCTGGGTCCCCGGATaGAGAGCCACACCCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: ALCLGTPFPQSSYWLKTKPWVPG*RATPIL Trigger: AAGAATGGGTGTGGCTCTTCATCCGGGGACCCAGGG...CTTAGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGAAACTCCTTCCCTGTCTGAGAGAGCCTCGCTGTTACCCCACCCCTCAGATAGAACTGAGATGGTaGCAGGCTCCTGAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KVKLLPCLREPRCYPTPQIELRW*QAPEAL Trigger: CAGAGCCTCAGGAGCCTGGCACCATCTCAGTTCTAT...CTGAGGGGTGGGGTAACAGCGAGGCTCTCTCAGACAGGGAAGGAGTTTCACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTACCCCACCCCTCAGGGCTCCTTCCCAAGTTCATCTGCCCGGGTTGTTATCTTCCATGACAGTCTaGACAGAGGATCCAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: AVTPPLRAPSQVHLPGLLSSMTV*TEDPRW Trigger: CCATCTTGGATCCTCTGTCCAGACTGTCATGGAAGA...TAACAACCCGGGCAGATGAACTTGGGAAGGAGCCCTGAGGGGTGGGGTAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTTTGGGCCTGGTCTCCTaGCCTCTTCTTGTGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: LEGREPTLVSVESVLICFLGLVS*PLLVST Trigger: AGTGGACACAAGAAGAGGCCAGGAGACCAGGCCCAA...AAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTGGGATCCACACAAGGATCTaGACCTGGGCCACTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSGSSLPWWYTPLIPALGIHTRI*TWATGD Trigger: GTCCCCAGTGGCCCAGGTCCAGATCCTTGTGTGGAT...CCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | AAATCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTGAGGTGGGGCAGCCCTaGTGTTCACAGCTCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KSSGSSLPWWYTPLIPALEVGQP*CSQLQL Trigger: CAGCTGGAGCTGTGAACACCAGGGCTGCCCCACCTC...AAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTGGGGGAGTTGGCAAGTTCTaGAGCCCACATCCTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSGSSLPWWYTPLIPALGGVGKF*SPHPSA Trigger: TGCAGAAGGATGTGGGCTTCAGAACTTGCCAACTCC...CCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTGGGTGGATAGAACTGAGATaGTGCCAGGCTCCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSGSSLPWWYTPLIPALGWIELR*CQAPEA Trigger: AGCCTCAGGAGCCTGGCACCATCTCAGTTCTATCCA...CCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCTCCTTATCATTGACCATTATTAGACCTGCTTCCATCTGGGCCTCCATGACAAGGATCTGGACCTaGGCCACTGGGGACTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PFSLSLTIIRPASIWASMTRIWT*ATGDFW Trigger: CCAGAAGTCCCCAGTGGCCCAGGTCCAGATCCTTGT...CATGGAGGCCCAGATGGAAGCAGGTCTAATAATGGTCAATGATAAGGAGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTGGGCCCCAGAGTTCCTACTaGCTCAAGACTAAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSGSSLPWWYTPLIPALGPQSSY*LKTKEQ Trigger: CTGCTCCTTAGTCTTGAGCCAGTAGGAACTCTGGGG...CCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTTGAATATTGGCCACAGGGTGAGAAGCTTCAGTGGGTCCAGCTGTGGCTCGAGTCTGCCGTGGTaGTACACACCTTTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: HLLNIGHRVRSFSGSSCGSSLPW*YTPLIP Trigger: TGGAATTAAAGGTGTGTACCACCACGGCAGACTCGA...GCCACAGCTGGACCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR CAA 90 bp | TGTGTCCACTGTAGTGGGCAGAGTCTGTGTTTGGGATGGGGTAGTTaGTGTCTCTTCTATTGTGTGACTGCTCACCATGATCCCCACGAC | + |
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Preference number: 2 (lower is better) Translates to: CVHCSGQSLCLGWGS*CLFYCVTAHHDPHD Trigger: GTCGTGGGGATCATGGTGAGCAGTCACACAATAGAAGAGACACAAACTACCCCATCCCAAACACAGACTCTGCCCACTACAGTGGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTGGGCTGTGGAATCTGTGCTaGTTTGCTTTGGATCCACAC | + |
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Preference number: 2 (lower is better) Translates to: SSGSSLPWWYTPLIPALGLWNLC*FALDPH Trigger: GTGTGGATCCAAAGCAAATCAGCACAGATTCCACAG...CCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGACTTCTGGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTATCCTGGCATCCTGAGTaGTATGTCTTGTTAATATTA | + |
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Preference number: 2 (lower is better) Translates to: GDFWFPQSGWSGEPSYGLSWHPE*YVLLIL Trigger: TAATATTAACAAGACATAGCACTCAGGATGCCAGGA...TAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | AAATCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTTACAGTAGGTCAGTCTaGTGGGTCCCCAGCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KSSGSSLPWWYTPLIPALYSRSV*WVPSQL Trigger: TAGCTGGCTGGGGACCCACCAGACTGACCTACTGTA...AAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTCTGACCACTCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCTGTGCTGATTTGCTTTaGATCCACACAAGGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLLTTPTPTALLNLQVRVCADLL*IHTRIW Trigger: CCAGATCCTTGTGTGGATCCAAAGCAAATCAGCACA...GACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGAGTGGTCAGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTTGCTTAGGAACACCATTTCCCCAGAGTTCCTACTGGCTCAAGACTAAGGGGTTCCTGGCATCCTaGGTGCTATGTCTTGTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: ALCLGTPFPQSSYWLKTKGFLAS*VLCLVN Trigger: ATTAACAAGACATAGCACTCAGGATGCCAGGAACCC...CTTAGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 90 bp | ATGAGAGAGGGCATCTTGGGTTCCTGGCATCCTGAGTGCTATGTCTaGTTAATATTAGCCTTGCCACCACAGGAACTATCCCCTCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: MREGILGSWHPECYV*LILALPPQELSPQD Trigger: ATCTTGAGGGGATAGTTCCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCACAGGAACTATCCCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATGGACACCCATTCTTCCATaGCAGTCTGGACAGAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: TTGTIPSRFINSCPLGEWTPILP*QSGQRI Trigger: GATCCTCTGTCCAGACTGTCATGGAAGAATGGGTGT...CCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGGGATAGTTCCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 90 bp | TTGGGTTCCTGGCATCCTGAGTGCTATGTCTTGTTAATATTAGCCTaGCCACCACAGGAACTATCCCCTCAAGATTTATTAACAGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGSWHPECYVLLILA*PPQELSPQDLLTAV Trigger: GACAGCTGTTAATAAATCTTGAGGGGATAGTTCCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | GACCTGGGCCACTGGGGACTTCTGGTTCCCTCAGAGTaGATGGTCAGGGGAGCCTTCATACGGCCTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DLGHWGLLVPSE*MVRGAFIRPTG Trigger: GCCAGTAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCCAGTGGCCCAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | CTGGTGGGTCCCCAGCCAGCTACAGGTAGACCTCAGTaGGGAAATTACCCTGGGTCCCCGGATGAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVGPQPATGRPQ*GNYPGSPDEEP Trigger: TGGCTCTTCATCCGGGGACCCAGGGTAATTTCCCCACTGAGGTCTACCTGTAGCTGGCTGGGGACCCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR GCA 72 bp | CTATGGAGAGGGCATCGCTGGATAGAACTGAGATGGTaGCAGGCTCCTGAGGCTCTGATGCCCAACCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LWRGHRWIELRW*QAPEALMPNLA Trigger: GGCCAGGTTGGGCATCAGAGCCTCAGGAGCCTGGCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | TGGGGCAGCCCTGGTGTTCACAGCTCCAGCTGGCTATaGAGAGGGCATCGCTGGATAGAACTGAGATGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WGSPGVHSSSWL*RGHRWIELRWC Trigger: GCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAGCCAGCTGGAGCTGTGAACACCAGGGCTGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | GGATCCAAGATGGCTGATGAGAAATCCCCCAGGAGGTaGGGCAGCCCTGGTGTTCACAGCTCCAGCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSKMADEKSPRR*GSPGVHSSSWL Trigger: TAGCCAGCTGGAGCTGTGAACACCAGGGCTGCCCCACCTCCTGGGGGATTTCTCATCAGCCATCTTGGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR TCA 72 bp | AGCCATTGGATTAGAAAGAGTCTGGGGGCTTCCAGATaGCAAGGCCTGGCCCAGCCACCACTATCCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHWIRKSLGASR*QGLAQPPLSLA Trigger: GGCCAGGGATAGTGGTGGCTGGGCCAGGCCTTGTCATCTGGAAGCCCCCAGACTCTTTCTAATCCAATGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | TGGCTATGGAGAGGGCATCGCTGGATAGAACTGAGATaGTGCCAGGCTCCTGAGGCTCTGATGCCCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLWRGHRWIELR*CQAPEALMPNL Trigger: CAGGTTGGGCATCAGAGCCTCAGGAGCCTGGCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | GCTTTGGATCCACACAAGGATCTGGACCTGGGCCACTaGGGACTTCTGGTTCCCTCAGAGTGGATGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALDPHKDLDLGH*GLLVPSEWMVR Trigger: CCTGACCATCCACTCTGAGGGAACCAGAAGTCCCCAGTGGCCCAGGTCCAGATCCTTGTGTGGATCCAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR GCA 72 bp | TCCTTCCCAAGTTCATCTGCCCGGGTTGTTACTCGGTaGCAGCATGAGAGAGGGCATCTTGGGTTCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SFPSSSARVVTR*QHERGHLGFLA Trigger: TGCCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACCGAGTAACAACCCGGGCAGATGAACTTGGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | GGTCTTCCCTGCAAAGCCATTGGATTAGAAAGAGTCTaGGGGCTTCCAGATGACAAGGCCTGGCCCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLPCKAIGLERV*GLPDDKAWPSH Trigger: GTGGCTGGGCCAGGCCTTGTCATCTGGAAGCCCCCAGACTCTTTCTAATCCAATGGCTTTGCAGGGAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | CATTCTTCCATGACAGTCTGGACAGAGGATCCAAGATaGCTGATGAGAAATCCCCCAGGAGGTGGGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HSSMTVWTEDPR*LMRNPPGGGAA Trigger: GGCTGCCCCACCTCCTGGGGGATTTCTCATCAGCCATCTTGGATCCTCTGTCCAGACTGTCATGGAAGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | CTTCCTAAGGCTCTTCAATACAGTAGGTCAGTCTGGTaGGTCCCCAGCCAGCTACAGGTAGACCTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPKALQYSRSVW*VPSQLQVDLSG Trigger: CCCACTGAGGTCTACCTGTAGCTGGCTGGGGACCCACCAGACTGACCTACTGTATTGAAGAGCCTTAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | ATCTGTGCTGATTTGCTTTGGATCCACACAAGGATCTaGACCTGGGCCACTGGGGACTTCTGGTTCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ICADLLWIHTRI*TWATGDFWFPQ Trigger: CTGAGGGAACCAGAAGTCCCCAGTGGCCCAGGTCCAGATCCTTGTGTGGATCCAAAGCAAATCAGCACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | ACCACTATCCCTGGCCCGTTTTCACCTCTTGAATATTaGCCACAGGGTGAGAAGCTTCAGTGGGTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTIPGPFSPLEY*PQGEKLQWVQL Trigger: CAGCTGGACCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGATAGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR TCA 72 bp | GACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTaGTTTGCTTTGGATCCACACAAGGATCTGGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: DASQHWCLWNLC*FALDPHKDLDL Trigger: CAGGTCCAGATCCTTGTGTGGATCCAAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCTCCTTATCATTGACCATTATTAGACCTGCTTCCATCTGGGCCTCCATGATGAGAGAGGGCATCTaGGGTTCCTGGCATCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PFSLSLTIIRPASIWASMMREGI*GSWHPE Trigger: CTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCAT...CATGGAGGCCCAGATGGAAGCAGGTCTAATAATGGTCAATGATAAGGAGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | ATACTTCCTAAGGCTCTTCAATACAGTAGGTCAGTCTaGTGGGTCCCCAGCCAGCTACAGGTAGACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILPKALQYSRSV*WVPSQLQVDLS Trigger: ACTGAGGTCTACCTGTAGCTGGCTGGGGACCCACCAGACTGACCTACTGTATTGAAGAGCCTTAGGAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | CTCGGTGCCAGCATGAGAGAGGGCATCTTGGGTTCCTaGCATCCTGAGTGCTATGTCTTGTTAATATTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGASMREGILGS*HPECYVLLILA Trigger: GGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR TCA 72 bp | CAGCATGAGAGAGGGCATCTTGGGTTCCTGGCATCCTaGGTGCTATGTCTTGTTAATATTAGCCTTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QHERGHLGFLAS*VLCLVNISLAT Trigger: GGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | CACTGCCCTTTTAAATCTTCAGGTTCGAGTCTGCCGTaGTGGTACACACCTTTAATTCCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HCPFKSSGSSLP*WYTPLIPALGR Trigger: CCTCCCAAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTTAAAAGGGCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR GCA 72 bp | ATGAGAGAGGGCATCTTGGGTTCCTGGCATCCTGAGTaGTATGTCTTGTTAATATTAGCCTTGCCACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: MREGILGSWHPE*YVLLILALPPQ Trigger: CTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | CCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATaGCAGAAGGGGAGTTGGCAAGTTCTGAAGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: PSRFINSCPLGE*QKGSWQVLKPT Trigger: TGTGGGCTTCAGAACTTGCCAACTCCCCTTCTGCCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CCA 72 bp | TGTGTCCACTGTAGTGGGCAGAGTCTGTGTTTGGGATaGGGTAGTTTGTGTCTCTTCTATTGTGTGACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVHCSGQSLCLG*GSLCLFYCVTA Trigger: AGCAGTCACACAATAGAAGAGACACAAACTACCCCATCCCAAACACAGACTCTGCCCACTACAGTGGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTTTGCTTAGGAACACCATTTCCCCAGAGTTCCTACTGGCTCAAGACTAAGCCTGAGTGCTATGTCTaGTTAATATTAGCCTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ALCLGTPFPQSSYWLKTKPECYV*LILALP Trigger: TGGCAAGGCTAATATTAACAAGACATAGCACTCAGG...CTTAGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGGCCTTTGCGGCTGGGTaGTCCCCGAGTAGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WSGEPSYGLLASVGPGLLAFAAG*SPSSGP Trigger: CGGACCACTACTCGGGGACCACCCAGCCGCAAAGGC...CAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | GCTGTTACCCCACCCCTCAGGGCTCCTTCCCAAGTTCATCTGCCCGGGTTGTTACCCCACGGCCGTCGCTaGTGCTCTCAGCCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVTPPLRAPSQVHLPGLLPHGRR*CSQPLS Trigger: TGACAGTGGCTGAGAGCAGCAGCGACGGCCGTGGGG...TAACAACCCGGGCAGATGAACTTGGGAAGGAGCCCTGAGGGGTGGGGTAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACTTCTGGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTACAGCCACTGAAGGGCTaGAGCGGGAGATCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GDFWFPQSGWSGEPSYGLQPLKG*SGRSRT Trigger: CGTTCTGGATCTCCCGCTGCAGCCCTTCAGTGGCTG...TAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | GGGGACTTCTGGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTAGGCCCAATGATGACATaGCCCACGTTGTCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GDFWFPQSGWSGEPSYGLGPMMT*PTLSPR Trigger: CCGTGGGGACAACGTGGGCCATGTCATCATTGGGCC...TAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGGCAGCAGGTATACTTTaGCGAAGGGGTCTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSGEPSYGLLASVGPGLLAAGIL*RRGLLC Trigger: GCACAGCAGACCCCTTCGTCAAAGTATACCTGCTGC...CAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTGACCACTCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCCACGGCCGTCGCTGCTaGTCTCAGCCACTGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLTTPTPTALLNLQVRVHGRRC*SQPLSP Trigger: GGGTGACAGTGGCTGAGAGCAGCAGCGACGGCCGTG...GACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGAGTGGTCAGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACTTCTGGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACGGCCTATTTCGCCGGACTGGATaGCACATGGACACAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDFWFPQSGWSGEPSYGLFRRTG*HMDTGL Trigger: CAGGCCTGTGTCCATGTGGCATCCAGTCCGGCGAAA...TAGGCCGTATGAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | GCTGTTACCCCACCCCTCAGGGCTCCTTCCCAAGTTCATCTGCCCGGGTTGTTACTCCATCATAGTCCATaGTCACCTCCACCTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVTPPLRAPSQVHLPGLLLHHSP*SPPPGP Trigger: TGGGCCAGGTGGAGGTGAGCATGGACTATGATGGAG...TAACAACCCGGGCAGATGAACTTGGGAAGGAGCCCTGAGGGGTGGGGTAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | GCCCAGCCACCACTATCCCTGGCCCGTTTTCACCTCTaGAATATTGGCCACAGGGTGAGAAGCTTCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQPPLSLARFHL*NIGHRVRSFSG Trigger: CCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGATAGTGGTGGCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTAGTATAGCCAGCCACTaGAGGGCTGCAGCGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEGREPTLVSVESVLICFSIASH*RAAAGD Trigger: ATCTCCCGCTGCAGCCCTTCAGTGGCTGGCTATACT...AAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGGCCTCTCATTGGTCCAGATaGGATTCTTGGCTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SGEPSYGLLASVGPGLLASHWSR*DSWLSP Trigger: TGGTGAAAGCCAAGAATCTCATCTGGACCAATGAGA...GGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTGCTTAGGAACACCATTTCCCCAGAGTTCCTACTGGCTCAAGACTAAGAGCAGGACTCGAAGGTaGCCTCCTCGCGCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALCLGTPFPQSSYWLKTKSRTRR*PPRAPG Trigger: TCCTGGAGCGCGAGGAGGCCACCTTCGAGTCCTGCT...CTTAGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | AGATGGCTGATGAGAAATCCCCCAGGAGGTGGGGCAGCCCTGGTGTTCACAGCTTTTGACGAAGGGGTCTaGTGTGCTCTTCTCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RWLMRNPPGGGAALVFTAFDEGV*CALLIG Trigger: ACCAATGAGAAGAGCACAGCAGACCCCTTCGTCAAA...AGCTGTGAACACCAGGGCTGCCCCACCTCCTGGGGGATTTCTCATCAGCCATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTACATGGACACAGGCCTaGGTAGTGTGGCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LEGREPTLVSVESVLICFTWTQA*VVWPAS Trigger: AGATGCTGGCCACACTACGCAGGCCTGTGTCCATGT...AAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTCCTTATCATTGACCATTATTAGACCTGCTTCCATCTGGGCCTCCATGACCCACCTCCCAGCCTaGGGGGCTCTTGATGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFSLSLTIIRPASIWASMTHLPA*GALDDA Trigger: AGCGTCATCAAGAGCCCCCCAGGCTGGGAGGTGGGT...CATGGAGGCCCAGATGGAAGCAGGTCTAATAATGGTCAATGATAAGGAGAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | CGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTaGCTTTGGATCCACACAAGGATCTGGACCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RANTGVCGICAD*LWIHTRIWTWA Trigger: GGCCCAGGTCCAGATCCTTGTGTGGATCCAAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR TCA 90 bp | GGAAATTACCCTGGGTCCCCGGATGAAGAGCCACACCCATTCTTCCATGACAGTGGGGTCCCAGCTCACTaGTGCTTTCAAAGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNYPGSPDEEPHPFFHDSGVPAH*CFQRCL Trigger: AAGACACCTTTGAAAGCATCAGTGAGCTGGGACCCC...ACTGTCATGGAAGAATGGGTGTGGCTCTTCATCCGGGGACCCAGGGTAATTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTGACCACTCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCCCCAGGGTGAAATCCTaGCCAAAGGTGTTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLLTTPTPTALLNLQVRVPRVKS*PKVLLT Trigger: TGTGAGCAACACCTTTGGGCAGGATTTCACCCTGGG...GACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGAGTGGTCAGAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | CACCTCTTGAATATTGGCCACAGGGTGAGAAGCTTCAGTGGGTCCAGCTGTGGCGCCTTATTCTGGTCCTaGAAGTATAGCCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLLNIGHRVRSFSGSSCGALFWS*KYSQPL Trigger: CAGTGGCTGGCTATACTTGCAGGACCAGAATAAGGC...GCCACAGCTGGACCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTGGCTTCGTTGAACACTaGGTTGGGGTCATCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEGREPTLVSVESVLICFGFVEH*VGVIPL Trigger: AAGAGGGATGACCCCAACCCAGTGTTCAACGAAGCC...AAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGCCCGTTTTCACCTCTTGAATATTGGCCACAGGGTGAGAAGCTTCAGTAGTGTGGCCAGCATCTaGTTCCAATGTGTGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLARFHLLNIGHRVRSFSSVASI*FQCVVP Trigger: GGGCACCACACATTGGAACCAGATGCTGGCCACACT...ACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | GGGTTGTTACTCGGTGCCAGCATGAGAGAGGGCATCTaGGGTTCCTGGCATCCTGAGTGCTATGTCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLLLGASMREGI*GSWHPECYVLL Trigger: TAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCTCATGCTGGCACCGAGTAACAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCTGACCACTCCCACGCCCACTGCCCTTTTAAATCTTCAGGTTCGAGTCGGTCCTGTAGCACAATaGCTGGCACTGAGAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLTTPTPTALLNLQVRVGPVAQ*LALRRS Trigger: TGATCTTCTCAGTGCCAGCCATTGTGCTACAGGACC...GACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTGGGAGTGGTCAGAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTCCTTATCATTGACCATTATTAGACCTGCTTCCATCTGGGCCTCCATGCATGCCACTGACCCCTaGCCCAATGATGACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFSLSLTIIRPASIWASMHATDP*PNDDMA Trigger: GGCCATGTCATCATTGGGCCAGGGGTCAGTGGCATG...CATGGAGGCCCAGATGGAAGCAGGTCTAATAATGGTCAATGATAAGGAGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGCCCGTTTTCACCTCTTGAATATTGGCCACAGGGTGAGAAGCTTCAGTTTAGTTTCGCCGGACTaGATGCCACATGGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLARFHLLNIGHRVRSFSLVSPD*MPHGHR Trigger: CCTGTGTCCATGTGGCATCCAGTCCGGCGAAACTAA...ACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTATTTTCCTCCCATCCTaGAGCAGGTATACTTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LEGREPTLVSVESVLICFIFLPS*SRYTLT Trigger: CGTCAAAGTATACCTGCTGCAGGATGGGAGGAAAAT...AAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTGCTTAGGAACACCATTTCCCCAGAGTTCCTACTGGCTCAAGACTAAGTGCTCACAGAGGAGATaGAATTCAGAGAGTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALCLGTPFPQSSYWLKTKCSQRR*NSESQP Trigger: CGGCTGACTCTCTGAATTCCATCTCCTCTGTGAGCA...CTTAGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGAACTATCCCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATGGGGACTGGATGCCACATaGACACAGGCCTGCGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTGTIPSRFINSCPLGEWGLDAT*TQACVV Trigger: CACTACGCAGGCCTGTGTCCATGTGGCATCCAGTCC...CCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGGGATAGTTCCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTCCTTATCATTGACCATTATTAGACCTGCTTCCATCTGGGCCTCCATGCACAATGGCTGGCACTaGGAAGATCATGGCTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSLSLTIIRPASIWASMHNGWH*EDHGFV Trigger: AACGAAGCCATGATCTTCTCAGTGCCAGCCATTGTG...CATGGAGGCCCAGATGGAAGCAGGTCTAATAATGGTCAATGATAAGGAGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | GGCATCTTGGGTTCCTGGCATCCTGAGTGCTATGTCTaGTTAATATTAGCCTTGCCACCACAGGAACTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GILGSWHPECYV*LILALPPQELS Trigger: GGATAGTTCCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | CCTGTGTCCCTATTCTATCTGCCCTTCTCCTTATCATaGACCATTATTAGACCTGCTTCCATCTGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSLFYLPFSLS*TIIRPASIWAS Trigger: GGAGGCCCAGATGGAAGCAGGTCTAATAATGGTCAATGATAAGGAGAAGGGCAGATAGAATAGGGACACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR TCA 90 bp | ACCACAGGAACTATCCCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATGGAGATCATGGCTTCGTTaGACACTGGGTTGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTGTIPSRFINSCPLGEWRSWLR*TLGWGH Trigger: ATGACCCCAACCCAGTGTTCAACGAAGCCATGATCT...CCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGGGATAGTTCCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGAACTATCCCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATGGCCTGCCCAAAGGTGTTaGTCACAGAGGAGATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TTGTIPSRFINSCPLGEWPAQRC*SQRRWN Trigger: ATTCCATCTCCTCTGTGAGCAACACCTTTGGGCAGG...CCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGGGATAGTTCCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | TGTAGTGGGCAGAGTCTGTGTTTGGGATGGGGTAGTTaGTGTCTCTTCTATTGTGTGACTGCTCACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSGQSLCLGWGS*CLFYCVTAHHD Trigger: ATCATGGTGAGCAGTCACACAATAGAAGAGACACAAACTACCCCATCCCAAACACAGACTCTGCCCACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| 3UTR CAA 72 bp | TGGCATCCTGAGTGCTATGTCTTGTTAATATTAGCCTaGCCACCACAGGAACTATCCCCTCAAGATTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: WHPECYVLLILA*PPQELSPQDLL Trigger: TAATAAATCTTGAGGGGATAGTTCCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 90 bp | CAATGTGTGGTGCCCATGCCACTGACCCCTGGCCCAATGATGACATaGCCCACGTTGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QCVVPMPLTPGPMMT*PTLSPRPSLLLSAT Trigger: AGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCAGGGGTCAGTGGCATGGGCACCACACATTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 90 bp | GGCCAGCATCTGGTTCCAATGTGTGGTGCCCATGCCACTGACCCCTaGCCCAATGATGACATGGCCCACGTTGTCCCCACGGCCGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQHLVPMCGAHATDP*PNDDMAHVVPTAVA Trigger: AGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCAGGGGTCAGTGGCATGGGCACCACACATTGGAACCAGATGCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 90 bp | GCAGCCTTATTCTGGTCCTGCAAGTATAGCCAGCCACTGAAGGGCTaGAGCGGGAGATCCAGAACGGACAGCTTCAGCTCCACCACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AALFWSCKYSQPLKG*SGRSRTDSFSSTTP Trigger: CGGCGTGGTGGAGCTGAAGCTGTCCGTTCTGGATCTCCCGCTGCAGCCCTTCAGTGGCTGGCTATACTTGCAGGACCAGAATAAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 90 bp | ACTGGATGCCACATGGACACAGGCCTGCGTAGTGTGGCCAGCATCTaGTTCCAATGTGTGGTGCCCATGCCACTGACCCCTGGCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TGCHMDTGLRSVASI*FQCVVPMPLTPGPM Trigger: CATTGGGCCAGGGGTCAGTGGCATGGGCACCACACATTGGAACCAGATGCTGGCCACACTACGCAGGCCTGTGTCCATGTGGCATCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGGCCTCCTGCCCAAAGGTGTaGCTCACAGAGGAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGEPSYGLLASVGPGLLASCPKV*LTEEME Trigger: TTCCATCTCCTCTGTGAGCAACACCTTTGGGCAGGA...GGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS TCA 90 bp | CAGCGTCAGCAGCCTTATTCTGGTCCTGCAAGTATAGCCAGCCACTaGAGGGCTGCAGCGGGAGATCCAGAACGGACAGCTTCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRQQPYSGPASIASH*RAAAGDPERTASAP Trigger: TGGAGCTGAAGCTGTCCGTTCTGGATCTCCCGCTGCAGCCCTTCAGTGGCTGGCTATACTTGCAGGACCAGAATAAGGCTGCTGACGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 90 bp | GCTTTCAAAGGTGTCTTCTATACTAAGGCTGCCTTTGCGGCTGGGTaGTCCCCGAGTAGTGGTCCGCTGGTCATTCCAAGGAGGGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: AFKGVFYTKAAFAAG*SPSSGPLVIPRRDP Trigger: CGGGTCCCTCCTTGGAATGACCAGCGGACCACTACTCGGGGACCACCCAGCCGCAAAGGCAGCCTTAGTATAGAAGACACCTTTGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 90 bp | ATAGGCATTCCTCTGGATCCGGGAGATGCCCACGATCTGTTCGTCTaGCAGCAGACTGACACGCATGAAGCAGGACTCGAAGGTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGIPLDPGDAHDLFV*QQTDTHEAGLEGGL Trigger: GAGGCCACCTTCGAGTCCTGCTTCATGCGTGTCAGTCTGCTGCCAGACGAACAGATCGTGGGCATCTCCCGGATCCAGAGGAATGCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGGGGAGCCTTCATACGGCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGTGCAGCAGGTATACTTaGACGAAGGGGTCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSGEPSYGLLASVGPGLLCSRYT*TKGSAV Trigger: CACAGCAGACCCCTTCGTCAAAGTATACCTGCTGCA...CAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTATGAAGGCTCCCCTGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGCCCGTTTTCACCTCTTGAATATTGGCCACAGGGTGAGAAGCTTCAGTATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLARFHLLNIGHRVRSFSMTWPT*SPRPSL Trigger: CAGCGACGGCCGTGGGGACAACGTGGGCCATGTCAT...ACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 90 bp | GCAGCGGGAGATCCAGAACGGACAGCTTCAGCTCCACCACGCCGGTaGTCACATTCCGCTCATCCTCGTCGATACCAAACACAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: AAGDPERTASAPPRR*SHSAHPRRYQTQKI Trigger: GATTTTCTGTGTTTGGTATCGACGAGGATGAGCGGAATGTGAGCACCGGCGTGGTGGAGCTGAAGCTGTCCGTTCTGGATCTCCCGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | GGAAATTACCCTGGGTCCCCGGATGAAGAGCCACACCCATTCTTCCATGACAGTATACTAAGGCTGCCTTaGCGGCTGGGTGGTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GNYPGSPDEEPHPFFHDSILRLP*RLGGPR Trigger: TCGGGGACCACCCAGCCGCAAAGGCAGCCTTAGTAT...ACTGTCATGGAAGAATGGGTGTGGCTCTTCATCCGGGGACCCAGGGTAATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTTACCCCACCCCTCAGGGCTCCTTCCCAAGTTCATCTGCCCGGGTTGTTAACAGCCGTCTTCTTCTaGCTCATTTTCCTCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AVTPPLRAPSQVHLPGLLTAVFF*LIFLPS Trigger: GGATGGGAGGAAAATGAGCAAGAAGAAGACGGCTGT...TAACAACCCGGGCAGATGAACTTGGGAAGGAGCCCTGAGGGGTGGGGTAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 90 bp | GGGCTGTGGGATCCAGGGGGACAGAGAACTTCTCATCGAAGAAGATaGAATAGGCATTCCTCTGGATCCGGGAGATGCCCACGATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLWDPGGQRTSHRRR*NRHSSGSGRCPRSV Trigger: AACAGATCGTGGGCATCTCCCGGATCCAGAGGAATGCCTATTCCATCTTCTTCGATGAGAAGTTCTCTGTCCCCCTGGATCCCACAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS TCA 90 bp | GGTCCTGTAGCACAATGGCTGGCACTGAGAAGATCATGGCTTCGTTaGACACTGGGTTGGGGTCATCCCTCTTCACAGCCGTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPVAQWLALRRSWLR*TLGWGHPSSQPSSS Trigger: AGAAGAAGACGGCTGTGAAGAGGGATGACCCCAACCCAGTGTTCAACGAAGCCATGATCTTCTCAGTGCCAGCCATTGTGCTACAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTGCTGTGCTCTTCTCATaGGTCCAGATGAGATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEGREPTLVSVESVLICFAVLFS*VQMRFL Trigger: CAAGAATCTCATCTGGACCAATGAGAAGAGCACAGC...AAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS-3UTR CAA 90 bp | AAATCTTCAGGTTCGAGTCTGCCGTGGTGGTACACACCTTTAATTCCAGCACTTTCGTTGAACACTGGGTaGGGGTCATCCCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KSSGSSLPWWYTPLIPALSLNTG*GSSLFT Trigger: TGTGAAGAGGGATGACCCCAACCCAGTGTTCAACGA...AAGTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CAA 90 bp | GTGCCCATGCCACTGACCCCTGGCCCAATGATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACTGTCACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VPMPLTPGPMMTWPT*SPRPSLLLSATVTR Trigger: CCGGGTGACAGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCAGGGGTCAGTGGCATGGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 72 bp | GTGCCCATGCCACTGACCCCTGGCCCAATGATGACATaGCCCACGTTGTCCCCACGGCCGTCGCTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPMPLTPGPMMT*PTLSPRPSLLL Trigger: GAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCAGGGGTCAGTGGCATGGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CAA 72 bp | CCACTGACCCCTGGCCCAATGATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLTPGPMMTWPT*SPRPSLLLSAT Trigger: AGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCAGGGGTCAGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 72 bp | CCTTTGCGGCTGGGTGGTCCCCGAGTAGTGGTCCGCTaGTCATTCCAAGGAGGGACCCGCTTCAGCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLRLGGPRVVVR*SFQGGTRFSLA Trigger: GGCTAAGCTGAAGCGGGTCCCTCCTTGGAATGACCAGCGGACCACTACTCGGGGACCACCCAGCCGCAAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 72 bp | ACTCGAAGGTGGCCTCCTCGCGCTCCAGGAGGTCTTTaGCTTGTAGTACTGCCACGTGGAGGGTGTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRRWPPRAPGGL*LVVLPRGGCGR Trigger: CCTCCCACACCCTCCACGTGGCAGTACTACAAGGCAAAGACCTCCTGGAGCGCGAGGAGGCCACCTTCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CAA 72 bp | GACTCGAAGGTGGCCTCCTCGCGCTCCAGGAGGTCTTaGCCTTGTAGTACTGCCACGTGGAGGGTGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DSKVASSRSRRS*PCSTATWRVWE Trigger: CTCCCACACCCTCCACGTGGCAGTACTACAAGGCAAAGACCTCCTGGAGCGCGAGGAGGCCACCTTCGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 72 bp | CTGGTTCCAATGTGTGGTGCCCATGCCACTGACCCCTaGCCCAATGATGACATGGCCCACGTTGTCCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LVPMCGAHATDP*PNDDMAHVVPT Trigger: CGTGGGGACAACGTGGGCCATGTCATCATTGGGCCAGGGGTCAGTGGCATGGGCACCACACATTGGAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CAA 90 bp | ATGAAGCAGGACTCGAAGGTGGCCTCCTCGCGCTCCAGGAGGTCTTaGCCTTGTAGTACTGCCACGTGGAGGGTGTGGGAGGCTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MKQDSKVASSRSRRS*PCSTATWRVWEAPS Trigger: TGATGGAGCCTCCCACACCCTCCACGTGGCAGTACTACAAGGCAAAGACCTCCTGGAGCGCGAGGAGGCCACCTTCGAGTCCTGCTTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 72 bp | CACATGGACACAGGCCTGCGTAGTGTGGCCAGCATCTaGTTCCAATGTGTGGTGCCCATGCCACTGACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HMDTGLRSVASI*FQCVVPMPLTP Trigger: AGGGGTCAGTGGCATGGGCACCACACATTGGAACCAGATGCTGGCCACACTACGCAGGCCTGTGTCCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 72 bp | TTCTGGTCCTGCAAGTATAGCCAGCCACTGAAGGGCTaGAGCGGGAGATCCAGAACGGACAGCTTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWSCKYSQPLKG*SGRSRTDSFSS Trigger: GGAGCTGAAGCTGTCCGTTCTGGATCTCCCGCTGCAGCCCTTCAGTGGCTGGCTATACTTGCAGGACCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 72 bp | ATCTCTCCCACAGCGTCAGCAGCCTTATTCTGGTCCTaGAAGTATAGCCAGCCACTGAAGGGCTGCAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ISPTASAALFWS*KYSQPLKGCSG Trigger: CCCGCTGCAGCCCTTCAGTGGCTGGCTATACTTGCAGGACCAGAATAAGGCTGCTGACGCTGTGGGAGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 72 bp | AGTTTCGCCGGACTGGATGCCACATGGACACAGGCCTaGGTAGTGTGGCCAGCATCTGGTTCCAATGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFAGLDATWTQA*VVWPASGSNVW Trigger: CCACACATTGGAACCAGATGCTGGCCACACTACGCAGGCCTGTGTCCATGTGGCATCCAGTCCGGCGAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 72 bp | GGTGTCTTCTATACTAAGGCTGCCTTTGCGGCTGGGTaGTCCCCGAGTAGTGGTCCGCTGGTCATTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVFYTKAAFAAG*SPSSGPLVIPR Trigger: CCTTGGAATGACCAGCGGACCACTACTCGGGGACCACCCAGCCGCAAAGGCAGCCTTAGTATAGAAGACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CCA 72 bp | CCTCTGGATCCGGGAGATGCCCACGATCTGTTCGTCTaGCAGCAGACTGACACGCATGAAGCAGGACTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PLDPGDAHDLFV*QQTDTHEAGLE Trigger: TTCGAGTCCTGCTTCATGCGTGTCAGTCTGCTGCCAGACGAACAGATCGTGGGCATCTCCCGGATCCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS TCA 72 bp | CAGCCTTATTCTGGTCCTGCAAGTATAGCCAGCCACTaGAGGGCTGCAGCGGGAGATCCAGAACGGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPYSGPASIASH*RAAAGDPERTA Trigger: AGCTGTCCGTTCTGGATCTCCCGCTGCAGCCCTTCAGTGGCTGGCTATACTTGCAGGACCAGAATAAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS GCA 72 bp | GATCCAGAACGGACAGCTTCAGCTCCACCACGCCGGTaGTCACATTCCGCTCATCCTCGTCGATACCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: DPERTASAPPRR*SHSAHPRRYQT Trigger: TGTTTGGTATCGACGAGGATGAGCGGAATGTGAGCACCGGCGTGGTGGAGCTGAAGCTGTCCGTTCTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS TCA 72 bp | GCACAATGGCTGGCACTGAGAAGATCATGGCTTCGTTaGACACTGGGTTGGGGTCATCCCTCTTCACAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AQWLALRRSWLR*TLGWGHPSSQP Trigger: CGGCTGTGAAGAGGGATGACCCCAACCCAGTGTTCAACGAAGCCATGATCTTCTCAGTGCCAGCCATTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CAA 72 bp | ATGCTTTCAAAGGTGTCTTCTATACTAAGGCTGCCTTaGCGGCTGGGTGGTCCCCGAGTAGTGGTCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLSKVSSILRLP*RLGGPRVVVRW Trigger: CCAGCGGACCACTACTCGGGGACCACCCAGCCGCAAAGGCAGCCTTAGTATAGAAGACACCTTTGAAAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
||
| CDS CAA 72 bp | TCCACCTGGCCCAGGGTGAAATCCTGCCCAAAGGTGTaGCTCACAGAGGAGATGGAATTCAGAGAGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: STWPRVKSCPKV*LTEEMEFRESA Trigger: GGCTGACTCTCTGAATTCCATCTCCTCTGTGAGCAACACCTTTGGGCAGGATTTCACCCTGGGCCAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS CAA 72 bp | AGCACAATGGCTGGCACTGAGAAGATCATGGCTTCGTaGAACACTGGGTTGGGGTCATCCCTCTTCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: STMAGTEKIMAS*NTGLGSSLFTA Trigger: GGCTGTGAAGAGGGATGACCCCAACCCAGTGTTCAACGAAGCCATGATCTTCTCAGTGCCAGCCATTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS CAA 90 bp | AGCTCACTGATGCTTTCAAAGGTGTCTTCTATACTAAGGCTGCCTTaGCGGCTGGGTGGTCCCCGAGTAGTGGTCCGCTGGTCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SSLMLSKVSSILRLP*RLGGPRVVVRWSFQ Trigger: TTGGAATGACCAGCGGACCACTACTCGGGGACCACCCAGCCGCAAAGGCAGCCTTAGTATAGAAGACACCTTTGAAAGCATCAGTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS CAA 90 bp | AGGTCCTGTAGCACAATGGCTGGCACTGAGAAGATCATGGCTTCGTaGAACACTGGGTTGGGGTCATCCCTCTTCACAGCCGTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSCSTMAGTEKIMAS*NTGLGSSLFTAVFF Trigger: GAAGAAGACGGCTGTGAAGAGGGATGACCCCAACCCAGTGTTCAACGAAGCCATGATCTTCTCAGTGCCAGCCATTGTGCTACAGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS CCA 72 bp | GATCCAGGGGGACAGAGAACTTCTCATCGAAGAAGATaGAATAGGCATTCCTCTGGATCCGGGAGATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: DPGGQRTSHRRR*NRHSSGSGRCP Trigger: TGGGCATCTCCCGGATCCAGAGGAATGCCTATTCCATCTTCTTCGATGAGAAGTTCTCTGTCCCCCTGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS TCA 72 bp | TGCTCATTTTCCTCCCATCCTGCAGCAGGTATACTTTaGCGAAGGGGTCTGCTGTGCTCTTCTCATTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CSFSSHPAAGIL*RRGLLCSSHWS Trigger: GGACCAATGAGAAGAGCACAGCAGACCCCTTCGTCAAAGTATACCTGCTGCAGGATGGGAGGAAAATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS GCA 72 bp | ACAGCCGTCTTCTTCTTGCTCATTTTCCTCCCATCCTaGAGCAGGTATACTTTGACGAAGGGGTCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TAVFFLLIFLPS*SRYTLTKGSAV Trigger: CACAGCAGACCCCTTCGTCAAAGTATACCTGCTGCAGGATGGGAGGAAAATGAGCAAGAAGAAGACGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS CAA 72 bp | TTGCTCATTTTCCTCCCATCCTGCAGCAGGTATACTTaGACGAAGGGGTCTGCTGTGCTCTTCTCATTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLIFLPSCSRYT*TKGSAVLFSLV Trigger: GACCAATGAGAAGAGCACAGCAGACCCCTTCGTCAAAGTATACCTGCTGCAGGATGGGAGGAAAATGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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| CDS CAA 72 bp | TATACTTTGACGAAGGGGTCTGCTGTGCTCTTCTCATaGGTCCAGATGAGATTCTTGGCTTTCACCACAACC | + |
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Preference number: 6 (lower is better) Translates to: YTLTKGSAVLFS*VQMRFLAFTTT Trigger: GGTTGTGGTGAAAGCCAAGAATCTCATCTGGACCAATGAGAAGAGCACAGCAGACCCCTTCGTCAAAGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059295.10 |
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