Pregenerated sensors for SYT10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063260Ensembl transcript IDs: ENSMUST00000029441.4
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAATaGGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGA | + |
Preference number: 1 (lower is better) Translates to: VLCARVFSVCRFLIQ*AHGSRSFCDMVLFG Trigger: TCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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3UTR TCA 72 bp | GCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAATaGGCACACGGTTCTAGATCTTTCTGTGATATGGTC | + |
Preference number: 3 (lower is better) Translates to: ARVFSVCRFLIQ*AHGSRSFCDMV Trigger: GACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAATCAGAAACCTACACACAGAAAACACACGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAGTGCCACCTCCTCCCTaGCCGCTCCTATCGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQVPPPP*PLLSAG Trigger: TCCAGCCGATAGGAGCGGCCAGGGAGGAGGTGGCAC...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTTTGTCCCACTCCACCTaGCCCGCGAAGCACAGCTCG | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEALSHST*PAKHSS Trigger: CGAGCTGTGCTTCGCGGGTCAGGTGGAGTGGGACAA...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCCTTCTGGCACAGGCTaGTCACACCGTCCTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLIPSGTG*SHRPPC Trigger: GCAAGGAGGACGGTGTGAGCAGCCTGTGCCAGAAGG...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAATGGGGGCCACAAGCTTaGTCTTCCAGCATGGCCAGC | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQWGPQA*SSSMAS Trigger: GCTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCA...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAATGTGCAGCGCCTTCTaGCACAGGCTGCTCACACCG | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQMCSAF*HRLLTP Trigger: CGGTGTGAGCAGCCTGTGCCAGAAGGCGCTGCACAT...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTAGCTCGGTGATGATGTaGAGCGCCTTCTGGCACAGG | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLISSVMM*SAFWHR Trigger: CCTGTGCCAGAAGGCGCTGCACATCATCACCGAGCT...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAGTGTGGACGGTGGCCTaGGAGAAGAACAGGACCCTT | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQVWTVA*EKNRTL Trigger: AAGGGTCCTGTTCTTCTCCCAGGCCACCGTCCACAC...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTTGTCTGCACTTCTGCTaGGATGTCGGGGGATGTGTG | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLICLHFC*DVGGCV Trigger: CACACATCCCCCGACATCCCAGCAGAAGTGCAGACA...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTAGGGGTGCCAGTGTGTaGTTGGCTTTCGGTGATAGG | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEARGASV*LAFGDR Trigger: CCTATCACCGAAAGCCAATCACACACTGGCACCCCT...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTGACTATCAAAGCTGGTaGCCCGGCCAGGTAACTCCA | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEADYQSW*PGQVTP Trigger: TGGAGTTACCTGGCCGGGCCACCAGCTTTGATAGTC...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCGGGGGATGTGTGGCTaGTTTTTATTGCAGGCTCAA | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLIRGMCG*FLLQAQ Trigger: TTGAGCCTGCAATAAAAATCAGCCACACATCCCCCG...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAGTTTCCCACAGGTCTTaGCGTCGTCTTTTCTGTTGC | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQVSHRS*RRLFCC Trigger: GCAACAGAAAAGACGACGTCAAGACCTGTGGGAAAC...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTCGGTGCACGCGGGTCTaGAATTTCTTCTTCCTATCC | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEARCTRV*NFFFLS Trigger: GGATAGGAAGAAGAAATTTCAGACCCGCGTGCACCG...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTAGCAAAGGGAGAACATaGTTTCCCCCAGGTCTATGC | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLISKGRT*FPPGLC Trigger: GCATAGACCTGGGGGAAATCATGTTCTCCCTTTGCT...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTGTGCCAGTGTGTGATTaGCTTTCGGTGATAGGCCAG | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAVPVCD*LSVIGQ Trigger: CTGGCCTATCACCGAAAGCCAATCACACACTGGCAC...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTCTTGACTATCAAAGCTaGTGGCCCGGCCAGGTAACT | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEALDYQS*WPGQVT Trigger: AGTTACCTGGCCGGGCCACCAGCTTTGATAGTCAAG...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTTTATGGTGTGGACGGTaGCCTGGGAGAAGAACAGGA | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEALWCGR*PGRRTG Trigger: TCCTGTTCTTCTCCCAGGCCACCGTCCACACCATAA...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTCAACCGCTAACAGGCTaGCTGAAATATCTGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAQPLTG*LKYLCH Trigger: GTGGCACAGATATTTCAGTCAGCCTGTTAGCGGTTG...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTTTCAGTTGGAGCACTTaGGATGCTTTGTGGAAGGAC | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLIFSWST*DALWKD Trigger: GTCCTTCCACAAAGCATCTCAAGTGCTCCAACTGAA...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAGTTTTATCCTCCCGATaGTCGTTCTCGTTTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQVLSSR*SFSFLL Trigger: GAGGAGAAACGAGAACGAGCATCGGGAGGATAAAAC...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTGTCGTAATCCATGACTaGAATGCACAGGCTGACCTG | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAVVIHD*NAQADL Trigger: CAGGTCAGCCTGTGCATTGCAGTCATGGATTACGAC...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTATGTCGGGGGATGTGTaGCTGATTTTTATTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLIMSGDV*LIFIAG Trigger: GCCTGCAATAAAAATCAGCCACACATCCCCCGACAT...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTAGCATCTCGTTCCAATaGTCTCTCCCAAGACCCTCA | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEASISFQ*SLPRPS Trigger: TGAGGGTCTTGGGAGAGACCATTGGAACGAGATGCT...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTTCCTTTAAAGCTGTCTaGACTTCTGCTGGGATGTCG | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEASFKAV*TSAGMS Trigger: CGACATCCCAGCAGAAGTGCAGACAGCTTTAAAGGA...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTTTATTGCAGGCTCAATaGCTTTGGGTGCTGGCTTTT | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLILLQAQ*LWVLAF Trigger: AAAAGCCAGCACCCAAAGCCATTGAGCCTGCAATAA...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCTGCTTGTAGAGTTCTaGTTTTATCCTCCCGATGCT | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLILLVEF*FYPPDA Trigger: AGCATCGGGAGGATAAAACCAGAACTCTACAAGCAG...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAATACTGTGGCTTCCCTaGAGAGATCAGAGACTTCAA | + |
Preference number: 4 (lower is better) Translates to: KSNVLCARVFSVCRFLIQILWLP*RDQRLQ Trigger: TTGAAGTCTCTGATCTCTCCAGGGAAGCCACAGTAT...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTCATACGGCCAGCAGTTaGCAAATAGCAAAGGGAGAA | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAHTASS*QIAKGE Trigger: TTCTCCCTTTGCTATTTGCCAACTGCTGGCCGTATG...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTTCAGATTTCTGCACTTaGTCACTGTCAAGGTCATAC | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLISDFCT*SLSRSY Trigger: GTATGACCTTGACAGTGATCAAGTGCAGAAATCTGA...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR TCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTACATCAGAGACACTTTaGCATAAGGATCTGATGACC | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLITSETL*HKDLMT Trigger: GGTCATCAGATCCTTATGTCAAAGTGTCTCTGATGT...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTGTGGCTGATTTTTATTaGAGGCTCAATGGCTTTGGG | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAVADFY*RLNGFG Trigger: CCCAAAGCCATTGAGCCTGCAATAAAAATCAGCCAC...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTCAGGCTCAATGGCTTTaGGTGCTGGCTTTTCATTTT | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAQAQWL*VLAFHF Trigger: AAAATGAAAAGCCAGCACCCAAAGCCATTGAGCCTG...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTTCTGTGGTAGCACAGTaGATATCTTTCCATACTGTG | + |
Preference number: 4 (lower is better) Translates to: KKSNVLCARVFSVCRFLISVVAQ*ISFHTV Trigger: CACAGTATGGAAAGATATCCACTGTGCTACCACAGA...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR GCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTGCATGTTTAATCAAGTaGTCCTTTAAAGCTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAACLIK*SFKAVC Trigger: GCAGACAGCTTTAAAGGAGCACTTGATTAAACATGC...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CCA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTCAATCATGTCGTGTCTaGAAAATCTGTCAAAATCAT | + |
Preference number: 4 (lower is better) Translates to: FNEHTVLDLSVIWSYLEAQSCRV*KICQNH Trigger: ATGATTTTGACAGATTTTCCAGACACGACATGATTG...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 90 bp | TATCTGTGCCACCTCCTCCCTGGCCGCTCCTATCGGCTGGAAAGATaGCCGAACACTTGTCCCACTCCACCTGACCCGCGAAGCACAGCT | + |
Preference number: 5 (lower is better) Translates to: YLCHLLPGRSYRLER*PNTCPTPPDPRSTA Trigger: AGCTGTGCTTCGCGGGTCAGGTGGAGTGGGACAAGTGTTCGGGCATCTTTCCAGCCGATAGGAGCGGCCAGGGAGGAGGTGGCACAGATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS TCA 90 bp | CTCCTATCGGCTGGAAAGATGCCCGAACACTTGTCCCACTCCACCTaGCCCGCGAAGCACAGCTCGGTGATGATGTGCAGCGCCTTCTGG | + |
Preference number: 5 (lower is better) Translates to: LLSAGKMPEHLSHST*PAKHSSVMMCSAFW Trigger: CCAGAAGGCGCTGCACATCATCACCGAGCTGTGCTTCGCGGGTCAGGTGGAGTGGGACAAGTGTTCGGGCATCTTTCCAGCCGATAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS TCA 90 bp | CCAGCAAGGCCAGGCCACAGAAGCTTACAACAACCGCTAACAGGCTaGCTGAAATATCTGTGCCACCTCCTCCCTGGCCGCTCCTATCGG | + |
Preference number: 5 (lower is better) Translates to: PARPGHRSLQQPLTG*LKYLCHLLPGRSYR Trigger: CCGATAGGAGCGGCCAGGGAGGAGGTGGCACAGATATTTCAGTCAGCCTGTTAGCGGTTGTTGTAAGCTTCTGTGGCCTGGCCTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS TCA 90 bp | CAAAAACTTCAGTTGGAGCACTTGAGATGCTTTGTGGAAGGACACTaGGGTTGGGGGCCACAAGCTTGCTCTTCCAGCATGGCCAGCACA | + |
Preference number: 5 (lower is better) Translates to: QKLQLEHLRCFVEGH*GWGPQACSSSMAST Trigger: TGTGCTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCACAAAGCATCTCAAGTGCTCCAACTGAAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CCA 90 bp | CTGGAGACATTCATTTGCCTTGGTAGGTGTCTCCTGAAGGAGTTGTaGCGGGATGAAGACGTAGGCTCGGTTGTTTGCCTTTGCACTCGA | + |
Preference number: 5 (lower is better) Translates to: LETFICLGRCLLKEL*RDEDVGSVVCLCTR Trigger: TCGAGTGCAAAGGCAAACAACCGAGCCTACGTCTTCATCCCGCCACAACTCCTTCAGGAGACACCTACCAAGGCAAATGAATGTCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CCA 90 bp | TCCTTTAAAGCTGTCTGCACTTCTGCTGGGATGTCGGGGGATGTGTaGCTGATTTTTATTGCAGGCTCAATGGCTTTGGGTGCTGGCTTT | + |
Preference number: 5 (lower is better) Translates to: SFKAVCTSAGMSGDV*LIFIAGSMALGAGF Trigger: AAAGCCAGCACCCAAAGCCATTGAGCCTGCAATAAAAATCAGCCACACATCCCCCGACATCCCAGCAGAAGTGCAGACAGCTTTAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAAGGAAGGACACTGAGGTaGGGGGCCACAAGCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: KSNVLCARVFSVCRFLIQGRTLR*GATSLL Trigger: GAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCC...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 90 bp | CTCCTGAAGGAGTTGTGGCGGGATGAAGACGTAGGCTCGGTTGTTTaGCTTTGCACTCGAGCATGTTTAATCAAGTGCTCCTTTAAAGCT | + |
Preference number: 5 (lower is better) Translates to: LLKELWRDEDVGSVV*LCTRACLIKCSFKA Trigger: AGCTTTAAAGGAGCACTTGATTAAACATGCTCGAGTGCAAAGGCAAACAACCGAGCCTACGTCTTCATCCCGCCACAACTCCTTCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 90 bp | AGTCAACCGATTTCTGCTTGTAGAGTTCTGGTTTTATCCTCCCGATaGTCGTTCTCGTTTCTCCTCTTTGTAAGATGGGTTCAGTGCCCA | + |
Preference number: 5 (lower is better) Translates to: SQPISACRVLVLSSR*SFSFLLFVRWVQCP Trigger: TGGGCACTGAACCCATCTTACAAAGAGGAGAAACGAGAACGAGCATCGGGAGGATAAAACCAGAACTCTACAAGCAGAAATCGGTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTGCAGGCTCAATGGCTTaGGGTGCTGGCTTTTCATTT | + |
Preference number: 5 (lower is better) Translates to: KKSNVLCARVFSVCRFLIAGSMA*GAGFSF Trigger: AAATGAAAAGCCAGCACCCAAAGCCATTGAGCCTGC...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAATCATACGGCCAGCAGTaGGCAAATAGCAAAGGGAGA | + |
Preference number: 5 (lower is better) Translates to: KSNVLCARVFSVCRFLIQSYGQQ*ANSKGR Trigger: TCTCCCTTTGCTATTTGCCAACTGCTGGCCGTATGA...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTAGAAGAACAGGACCCTaGACTATCAAAGCTGGTGGC | + |
Preference number: 5 (lower is better) Translates to: KKSNVLCARVFSVCRFLIRRTGP*TIKAGG Trigger: GCCACCAGCTTTGATAGTCAAGGGTCCTGTTCTTCT...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTCAACTTCAGTTGGAGCACTaGAGATGCTTTGTGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: KSNVLCARVFSVCRFLIQLQLEH*RCFVEG Trigger: TCCTTCCACAAAGCATCTCAAGTGCTCCAACTGAAG...TTGAATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTAAGATAATGGCTTCGTaGTACACGGGATTGAGAGTA | + |
Preference number: 5 (lower is better) Translates to: KKSNVLCARVFSVCRFLIKIMAS*YTGLRV Trigger: TACTCTCAATCCCGTGTACAACGAAGCCATTATCTT...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | TTCAATGAGCACACGGTTCTAGATCTTTCTGTGATATGGTCTTATTTGGAGGCTTCTCAAAAACTTCAGTaGGAGCACTTGAGATGCTTT | + |
Preference number: 5 (lower is better) Translates to: FNEHTVLDLSVIWSYLEASQKLQ*EHLRCF Trigger: AAAGCATCTCAAGTGCTCCAACTGAAGTTTTTGAGA...AGCCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS-3UTR CAA 90 bp | AAGAAGTCAAATGTTCTGTGCGCGCGTGTGTTTTCTGTGTGTAGGTTTCTGATTTCGTTGTACACGGGATaGAGAGTATTTTTCTTTGTA | + |
Preference number: 5 (lower is better) Translates to: KKSNVLCARVFSVCRFLISLYTG*RVFFFV Trigger: TACAAAGAAAAATACTCTCAATCCCGTGTACAACGA...AATCAGAAACCTACACACAGAAAACACACGCGCGCACAGAACATTTGACTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 72 bp | CACCTCCTCCCTGGCCGCTCCTATCGGCTGGAAAGATaGCCGAACACTTGTCCCACTCCACCTGACCCGCGA | + |
Preference number: 6 (lower is better) Translates to: HLLPGRSYRLER*PNTCPTPPDPR Trigger: TCGCGGGTCAGGTGGAGTGGGACAAGTGTTCGGGCATCTTTCCAGCCGATAGGAGCGGCCAGGGAGGAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS TCA 72 bp | GGTGTGGACGGTGGCCTGGGAGAAGAACAGGACCCTTaGCTATCAAAGCTGGTGGCCCGGCCAGGTAACTCC | + |
Preference number: 6 (lower is better) Translates to: GVDGGLGEEQDP*LSKLVARPGNS Trigger: GGAGTTACCTGGCCGGGCCACCAGCTTTGATAGTCAAGGGTCCTGTTCTTCTCCCAGGCCACCGTCCACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CCA 72 bp | GCGAAGCACAGCTCGGTGATGATGTGCAGCGCCTTCTaGCACAGGCTGCTCACACCGTCCTCCTTGCGGAAA | + |
Preference number: 6 (lower is better) Translates to: AKHSSVMMCSAF*HRLLTPSSLRK Trigger: TTTCCGCAAGGAGGACGGTGTGAGCAGCCTGTGCCAGAAGGCGCTGCACATCATCACCGAGCTGTGCTTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CCA 72 bp | ATCTGTGCCACCTCCTCCCTGGCCGCTCCTATCGGCTaGAAAGATGCCCGAACACTTGTCCCACTCCACCTG | + |
Preference number: 6 (lower is better) Translates to: ICATSSLAAPIG*KDARTLVPLHL Trigger: CAGGTGGAGTGGGACAAGTGTTCGGGCATCTTTCCAGCCGATAGGAGCGGCCAGGGAGGAGGTGGCACAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS TCA 72 bp | GCTGGAAAGATGCCCGAACACTTGTCCCACTCCACCTaGCCCGCGAAGCACAGCTCGGTGATGATGTGCAGC | + |
Preference number: 6 (lower is better) Translates to: AGKMPEHLSHST*PAKHSSVMMCS Trigger: GCTGCACATCATCACCGAGCTGTGCTTCGCGGGTCAGGTGGAGTGGGACAAGTGTTCGGGCATCTTTCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CCA 72 bp | TGGGAGAAGAACAGGACCCTTGACTATCAAAGCTGGTaGCCCGGCCAGGTAACTCCAGCAAGGGGTGCCAGT | + |
Preference number: 6 (lower is better) Translates to: WEKNRTLDYQSW*PGQVTPARGAS Trigger: ACTGGCACCCCTTGCTGGAGTTACCTGGCCGGGCCACCAGCTTTGATAGTCAAGGGTCCTGTTCTTCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CAA 72 bp | GGAGCACTTGAGATGCTTTGTGGAAGGACACTGAGGTaGGGGGCCACAAGCTTGCTCTTCCAGCATGGCCAG | + |
Preference number: 6 (lower is better) Translates to: GALEMLCGRTLR*GATSLLFQHGQ Trigger: CTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCACAAAGCATCTCAAGTGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 72 bp | GACCTCATTGTGCCCCACCCTGTCGTAATCCATGACTaGAATGCACAGGCTGACCTGGTCCACATTCTCTGG | + |
Preference number: 6 (lower is better) Translates to: DLIVPHPVVIHD*NAQADLVHILW Trigger: CCAGAGAATGTGGACCAGGTCAGCCTGTGCATTGCAGTCATGGATTACGACAGGGTGGGGCACAATGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CAA 72 bp | CTTTGTGGAAGGACACTGAGGTTGGGGGCCACAAGCTaGCTCTTCCAGCATGGCCAGCACAACTTCCAGAAG | + |
Preference number: 6 (lower is better) Translates to: LCGRTLRLGATS*LFQHGQHNFQK Trigger: CTTCTGGAAGTTGTGCTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCACAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS TCA 72 bp | CAGTTGGAGCACTTGAGATGCTTTGTGGAAGGACACTaGGGTTGGGGGCCACAAGCTTGCTCTTCCAGCATG | + |
Preference number: 6 (lower is better) Translates to: QLEHLRCFVEGH*GWGPQACSSSM Trigger: CATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCACAAAGCATCTCAAGTGCTCCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CAA 90 bp | ACTTCAGTTGGAGCACTTGAGATGCTTTGTGGAAGGACACTGAGGTaGGGGGCCACAAGCTTGCTCTTCCAGCATGGCCAGCACAACTTC | + |
Preference number: 6 (lower is better) Translates to: TSVGALEMLCGRTLR*GATSLLFQHGQHNF Trigger: GAAGTTGTGCTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCACAAAGCATCTCAAGTGCTCCAACTGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CCA 72 bp | GCTGTCTGCACTTCTGCTGGGATGTCGGGGGATGTGTaGCTGATTTTTATTGCAGGCTCAATGGCTTTGGGT | + |
Preference number: 6 (lower is better) Translates to: AVCTSAGMSGDV*LIFIAGSMALG Trigger: ACCCAAAGCCATTGAGCCTGCAATAAAAATCAGCCACACATCCCCCGACATCCCAGCAGAAGTGCAGACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CAA 90 bp | CTTGAGATGCTTTGTGGAAGGACACTGAGGTTGGGGGCCACAAGCTaGCTCTTCCAGCATGGCCAGCACAACTTCCAGAAGACAAAAAGG | + |
Preference number: 6 (lower is better) Translates to: LEMLCGRTLRLGATS*LFQHGQHNFQKTKR Trigger: CCTTTTTGTCTTCTGGAAGTTGTGCTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCACAAAGCATCTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CAA 90 bp | ACGCTGGAGACATTCATTTGCCTTGGTAGGTGTCTCCTGAAGGAGTaGTGGCGGGATGAAGACGTAGGCTCGGTTGTTTGCCTTTGCACT | + |
Preference number: 6 (lower is better) Translates to: TLETFICLGRCLLKE*WRDEDVGSVVCLCT Trigger: AGTGCAAAGGCAAACAACCGAGCCTACGTCTTCATCCCGCCACAACTCCTTCAGGAGACACCTACCAAGGCAAATGAATGTCTCCAGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 72 bp | GAGTTGTGGCGGGATGAAGACGTAGGCTCGGTTGTTTaGCTTTGCACTCGAGCATGTTTAATCAAGTGCTCC | + |
Preference number: 6 (lower is better) Translates to: ELWRDEDVGSVV*LCTRACLIKCS Trigger: GGAGCACTTGATTAAACATGCTCGAGTGCAAAGGCAAACAACCGAGCCTACGTCTTCATCCCGCCACAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS CAA 72 bp | TCATACTGGAGCGCAAAGTTAAGTTTCCCACAGGTCTaGACGTCGTCTTTTCTGTTGCCCTCGGAGTCAACC | + |
Preference number: 6 (lower is better) Translates to: SYWSAKLSFPQV*TSSFLLPSEST Trigger: GGTTGACTCCGAGGGCAACAGAAAAGACGACGTCAAGACCTGTGGGAAACTTAACTTTGCGCTCCAGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 72 bp | TGGCGGGATGAAGACGTAGGCTCGGTTGTTTGCCTTTaGACTCGAGCATGTTTAATCAAGTGCTCCTTTAAA | + |
Preference number: 6 (lower is better) Translates to: WRDEDVGSVVCL*TRACLIKCSFK Trigger: TTTAAAGGAGCACTTGATTAAACATGCTCGAGTGCAAAGGCAAACAACCGAGCCTACGTCTTCATCCCGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |
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CDS GCA 72 bp | ATTTCTGCTTGTAGAGTTCTGGTTTTATCCTCCCGATaGTCGTTCTCGTTTCTCCTCTTTGTAAGATGGGTT | + |
Preference number: 6 (lower is better) Translates to: ISACRVLVLSSR*SFSFLLFVRWV Trigger: AACCCATCTTACAAAGAGGAGAAACGAGAACGAGCATCGGGAGGATAAAACCAGAACTCTACAAGCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029441.4 |