Pregenerated sensors for SYS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045503Ensembl transcript IDs: ENSMUST00000072452.11, ENSMUST00000109352.8, ENSMUST00000125086.2, ENSMUST00000138268.8, ENSMUST00000142892.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCAGGGTTCTGCTCAGACTTGGGCCAGACCCCATCTGGAGGTCTaGGCAGCCCAAGGTGATGGGGCCCAAGTGCCAGCAGAGTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: FQGSAQTWARPHLEV*AAQGDGAQVPAECP Trigger: TGGACACTCTGCTGGCACTTGGGCCCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACCCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR GCA 90 bp | TGGCAGCTCCAGCACCATCCTATGTTACTCAGCCGAGCGCTGCAGTaGGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTGCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: WQLQHHPMLLSRALQ*EEQGAGSTGPVLLL Trigger: TAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCGCTCGGCTGAGTAACATAGGATGGTGCTGGAGCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR GCA 90 bp | CGCTGCAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTaGTCCTACAGCCCCAGCATGAGTCCATCTCATCTGGATGATCAG | + |
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Preference number: 1 (lower is better) Translates to: RCSARSRVQAALVQS*SYSPSMSPSHLDDQ Trigger: CTGATCATCCAGATGAGATGGACTCATGCTGGGGCTGTAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR CCA 90 bp | CTTCACATTTCCAGGGTTCTGCTCAGACTTGGGCCAGACCCCATCTaGAGGTCTGAGCAGCCCAAGGTGATGGGGCCCAAGTGCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LHISRVLLRLGPDPI*RSEQPKVMGPKCQQ Trigger: CTGCTGGCACTTGGGCCCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACCCTGGAAATGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR TCA 90 bp | GGGAGGGATGCTGGGGTTTTCTCTGGGTCCTGTCTCTGGCTGTGCTaGGTGACAACAGCAAGGCAGAGTCCATACAGGGAACTGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GRDAGVFSGSCLWLC*VTTARQSPYRELEG Trigger: TCCCTCCAGTTCCCTGTATGGACTCTGCCTTGCTGTTGTCACTCAGCACAGCCAGAGACAGGACCCAGAGAAAACCCCAGCATCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR CCA 90 bp | TATGTCTTCAGAGTTTGTGTTAGGGAGGAAACCCACCAATCTAGCTaGGCCCAGGCCCTGCAGCCAGTGTGGCCCCAACCCCGGGTTAAC | + |
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Preference number: 1 (lower is better) Translates to: YVFRVCVREETHQSS*AQALQPVWPQPRVN Trigger: GTTAACCCGGGGTTGGGGCCACACTGGCTGCAGGGCCTGGGCCCAGCTAGATTGGTGGGTTTCCTCCCTAACACAAACTCTGAAGACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR CCA 90 bp | CTCCAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTaGCAGATCCTGAGAGCCGCCATCCACTGGCATCACTCTCATCAG | + |
|
Preference number: 1 (lower is better) Translates to: LQRLLQSAAAPLLPT*QILRAAIHWHHSHQ Trigger: CTGATGAGAGTGATGCCAGTGGATGGCGGCTCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| 3UTR GCA 90 bp | GATCAGAGTCTAGCATGTCTGTCTCCAAAGACTGCTGCAGTCTGCTaGGGCTCCACTGCTTCCTACTTGGCAGATCCTGAGAGCCGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: DQSLACLSPKTAAVC*GSTASYLADPESRH Trigger: ATGGCGGCTCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGACAGACATGCTAGACTCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| 3UTR CCA 90 bp | ATGTGGCCTGGCTGGAGATGGGCAGTTTGGGAACTCCCCTTTTCATaGATTGACTTGTCGGGCCTACATCATGTTCTCAGCTCTACCAGC | + |
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Preference number: 1 (lower is better) Translates to: MWPGWRWAVWELPFS*IDLSGLHHVLSSTS Trigger: GCTGGTAGAGCTGAGAACATGATGTAGGCCCGACAAGTCAATCCATGAAAAGGGGAGTTCCCAAACTGCCCATCTCCAGCCAGGCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR TCA 90 bp | CCAGTCTTGCTCCTACAGCCCCAGCATGAGTCCATCTCATCTGGATaGTCAGAGTCTAGCATGTCTGTCTCCAAAGACTGCTGCAGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: PVLLLQPQHESISSG*SESSMSVSKDCCSL Trigger: CAGACTGCAGCAGTCTTTGGAGACAGACATGCTAGACTCTGATCATCCAGATGAGATGGACTCATGCTGGGGCTGTAGGAGCAAGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR CCA 90 bp | CTACCCTCCATGAGGTCCCTTACTGGCCTCCAGATATCAAGGCTTTaGCAGACAGAGGCCATTCTTACATCTGTGATCATGGCTGCTACC | + |
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Preference number: 1 (lower is better) Translates to: LPSMRSLTGLQISRL*QTEAILTSVIMAAT Trigger: GGTAGCAGCCATGATCACAGATGTAAGAATGGCCTCTGTCTGCCAAAGCCTTGATATCTGGAGGCCAGTAAGGGACCTCATGGAGGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR TCA 90 bp | ATGATGGCTCATGTGACATGGTTCCAAATCTGCCACTACCCTCCATaGGGTCCCTTACTGGCCTCCAGATATCAAGGCTTTGGCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: MMAHVTWFQICHYPP*GPLLASRYQGFGRQ Trigger: CTGTCTGCCAAAGCCTTGATATCTGGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCAGATTTGGAACCATGTCACATGAGCCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR GCA 90 bp | GCACTGTTGCTTCAGAAACTGCACACAGATCTCGCATGCGTTTCATaGATATGGTGTCTGTACAGGTTGAGTGTGGGCATGCACACGTGC | + |
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Preference number: 1 (lower is better) Translates to: ALLLQKLHTDLACVS*IWCLYRLSVGMHTC Trigger: GCACGTGTGCATGCCCACACTCAACCTGTACAGACACCATATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR TCA 90 bp | TATCACAGAACTCAAAAGACAGCAAACAGAAACTCCTGCCACAGTTaGGGTCCAGTAGAAGCTGGCTGCCTGCTCACTTCCAGAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: YHRTQKTANRNSCHS*GPVEAGCLLTSREQ Trigger: CTGCTCTCTGGAAGTGAGCAGGCAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTTTGAGTTCTGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR GCA 90 bp | GGTATGTTCATTCACCAGGAAGCTGGAGGTAGGTTTGTTTTAGACTaGAGCCTTCATCCTCTGGAAAGACACACATGGCATGCGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GMFIHQEAGGRFVLD*SLHPLERHTWHAFL Trigger: GAGGAACGCATGCCATGTGTGTCTTTCCAGAGGATGAAGGCTGCAGTCTAAAACAAACCTACCTCCAGCTTCCTGGTGAATGAACATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR CCA 90 bp | GGCTATGGACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTaGTTTGGCAACACAGCAAAGGTACTGGCTGTCATGGGCATAAGA | + |
|
Preference number: 1 (lower is better) Translates to: GYGPRNQVFLHRESL*FGNTAKVLAVMGIR Trigger: TCTTATGCCCATGACAGCCAGTACCTTTGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTCCATAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR CCA 90 bp | GGGAGTGTGGCAGTTTACACCAGATACTGTAGAGGCAGCTGCAGGTaGAGGGTGAGATATAGTTATTTTGCCTGTTTTCTTGAGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: GSVAVYTRYCRGSCR*RVRYSYFACFLETG Trigger: CCCTGTCTCAAGAAAACAGGCAAAATAACTATATCTCACCCTCCACCTGCAGCTGCCTCTACAGTATCTGGTGTAAACTGCCACACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR GCA 90 bp | AAACCATTCGCACTGTTGCTTCAGAAACTGCACACAGATCTCGCATaGGTTTCATGCATATGGTGTCTGTACAGGTTGAGTGTGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: KPFALLLQKLHTDLA*VSCIWCLYRLSVGM Trigger: CATGCCCACACTCAACCTGTACAGACACCATATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGCGAATGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR TCA 90 bp | TCCAGATATCAAGGCTTTGGCAGACAGAGGCCATTCTTACATCTGTaGTCATGGCTGCTACCTGCCTTTATGATGGGACCTCATTATCTC | + |
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Preference number: 1 (lower is better) Translates to: SRYQGFGRQRPFLHL*SWLLPAFMMGPHYL Trigger: GAGATAATGAGGTCCCATCATAAAGGCAGGTAGCAGCCATGATCACAGATGTAAGAATGGCCTCTGTCTGCCAAAGCCTTGATATCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR TCA 90 bp | TGGCAGTTTACACCAGATACTGTAGAGGCAGCTGCAGGTGGAGGGTaGGATATAGTTATTTTGCCTGTTTTCTTGAGACAGGGCTTCACT | + |
|
Preference number: 1 (lower is better) Translates to: WQFTPDTVEAAAGGG*DIVILPVFLRQGFT Trigger: AGTGAAGCCCTGTCTCAAGAAAACAGGCAAAATAACTATATCTCACCCTCCACCTGCAGCTGCCTCTACAGTATCTGGTGTAAACTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR CCA 90 bp | TGTCAGCAGCCTAGCACTCTGTACCTACATCTTTTTCTGTGGCTATaGACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: CQQPSTLYLHLFLWL*TQKSGISPQRIPVV Trigger: AACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAGGTACAGAGTGCTAGGCTGCTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR CCA 90 bp | GGAAAGACACACATGGCATGCGTTCCTCTGTCACTTGATAAGCTGTaGTCCTTATGCACCGCCTACCCATTTTTCATGAAGAGGTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: GKTHMACVPLSLDKL*SLCTAYPFFMKRLL Trigger: TAACAACCTCTTCATGAAAAATGGGTAGGCGGTGCATAAGGACCACAGCTTATCAAGTGACAGAGGAACGCATGCCATGTGTGTCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR TCA 90 bp | GAGCAACAGAATCCTCAGCTTAAGGGAGCAGCCACACTCAACTGCTaGAATCATTCATTACTGTCACGTATGTCTTCAGAGTTTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: EQQNPQLKGAATLNC*NHSLLSRMSSEFVL Trigger: TAACACAAACTCTGAAGACATACGTGACAGTAATGAATGATTTCAGCAGTTGAGTGTGGCTGCTCCCTTAAGCTGAGGATTCTGTTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTGCTCCTACAGCCCCAGCATGAGGTCTCCAAAGACTGCTaGAGTCTGCTGCGGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EQGAGSTGPVLLLQPQHEVSKDC*SLLRLH Trigger: GTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGAC...CTCATGCTGGGGCTGTAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR-3UTR TCA 90 bp | GCACGGCCATGCATTTTTCTTGTGCTTGATGCCTCCTCCCCTCGACGTCCTGTCCCCCATCTGGAGGTCTaGGCAGCCCAAGGTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: ARPCIFLVLDASSPRRPVPHLEV*AAQGDG Trigger: CCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGG...GACAGGACGTCGAGGGGAGGAGGCATCAAGCACAAGAAAAATGCATGGCCGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCAGCCGAGCGCTGCAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGGTTTTGCCCAGCTGGTaGAGTACTCCTGAGGAAATC | + |
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Preference number: 2 (lower is better) Translates to: YSAERCSARSRVQAALVQVLPSW*STPEEI Trigger: GATTTCCTCAGGAGTACTGCACCAGCTGGGCAAAAC...CTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCGCTCGGCTGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCCCATCTGGAGGTCTaGGCAGCCCAAGGTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: SPKTAAVCCGSTASYLADPHLEV*AAQGDG Trigger: CCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGG...ATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCTGAGAGTGATGGGGCCCAAGTaGCAGCAGAGTGTCCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: RLLQSAAAPLLPTWQILRVMGPK*QQSVQR Trigger: CCTTTGGACACTCTGCTGGCACTTGGGCCCCATCAC...TCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR CAA 90 bp | TCTCCAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTaGGCAGATCCTGAGAGCCGCCATCCACTGGCATCACTCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: SPKTAAVCCGSTASY*ADPESRHPLASLSS Trigger: TGATGAGAGTGATGCCAGTGGATGGCGGCTCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTGTTAGGCAGAGTGAAGGGAGAGGCAGGGCCAAGACTTCAGGTCTCCAGGGTGTCTGTACAGGTTaGGTGTGGGCATGCACACGT | + |
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Preference number: 2 (lower is better) Translates to: SGVRQSEGRGRAKTSGLQGVCTG*VWACTR Trigger: ACGTGTGCATGCCCACACTCAACCTGTACAGACACC...CTGGAGACCTGAAGTCTTGGCCCTGCCTCTCCCTTCACTCTGCCTAACACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGCCAGGGAGCCGAGCGCTGCAGTaGGAGGAGCAGGGTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LVSSRSSWSTKRVLGQPGSRALQ*EEQGAG Trigger: GCCTGCACCCTGCTCCTCGCACTGCAGCGCTCGGCT...CCCTGGCTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTACCGAGCAGAGCCAAGAGGCAAGAAGGGCTCTCTGTGCAGGAAGCAAAACGGTTCTGCTCAGACTTaGGCCAGACCCCATCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LYRAEPRGKKGSLCRKQNGSAQT*ARPHLE Trigger: CTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACC...GTTTTGCTTCCTGCACAGAGAGCCCTTCTTGCCTCTTGGCTCTGCTCGGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGTTCCAAATCTGCCACTACCCTCCATGAGGTCCCTTACTGGCCTCCAGATGGTTCTGCTCAGACTTaGGCCAGACCCCATCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HGSKSATTLHEVPYWPPDGSAQT*ARPHLE Trigger: CTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACC...ATCTGGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCAGATTTGGAACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR CAA 90 bp | GGCCTGGCTGGAGATGGGCAGTTTGGGAACTCCCCTTTTCATGGATaGACTTGTCGGGCCTACATCATGTTCTCAGCTCTACCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: GLAGDGQFGNSPFHG*TCRAYIMFSALPAT Trigger: GGTTGCTGGTAGAGCTGAGAACATGATGTAGGCCCGACAAGTCAATCCATGAAAAGGGGAGTTCCCAAACTGCCCATCTCCAGCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGTGCCACTACCCTCCATaGGGTCCCTTACTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLCHYPP*GPLLAS Trigger: GGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCA...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCTGAATCTCCGCCCTCTGTaGAAGAGTGCATTGTCACCT | + |
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Preference number: 2 (lower is better) Translates to: QRLLQSAAAPLLPTWQILNLRPL*KSALSP Trigger: AGGTGACAATGCACTCTTGCACAGAGGGCGGAGATT...CAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACAGCAGGGCCAGACCCCATCTaGAGGTCTGAGCAGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: PRNQVFLHRESLWFGNTAGPDPI*RSEQPK Trigger: CTTGGGCTGCTCAGACCTCCAGATGGGGTCTGGCCC...TGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGACAGCCAGGGCTCTGTCACACCAAGACACCCTGTCTCCAAAACCCAAAAGGTCCAGTAGAAGCTaGCTGCCTGCTCACTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SRTARALSHQDTLSPKPKRSSRS*LPAHFQ Trigger: CTGGAAGTGAGCAGGCAGCCAGCTTCTACTGGACCT...TTTGGGTTTTGGAGACAGGGTGTCTTGGTGTGACAGAGCCCTGGCTGTCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGCACTCTGTACCTACATCTTTTTCTGTGGCTATGGACCCAGAAATCAGGGGCCAGACCCCATCTaGAGGTCTGAGCAGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SLALCTYIFFCGYGPRNQGPDPI*RSEQPK Trigger: CTTGGGCTGCTCAGACCTCCAGATGGGGTCTGGCCC...CTGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAGGTACAGAGTGCTAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTAGCACTCTGTACCTACATCTTTTTCTGTGGCTATGGACCCAGAAATCAGTGCCACTACCCTCCATaGGGTCCCTTACTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLALCTYIFFCGYGPRNQCHYPP*GPLLAS Trigger: GGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCA...CTGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAGGTACAGAGTGCTAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGTCTGGCTGTGCTGAGTaGCAACAGCAAGGCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLSGCAE*QQQGRV Trigger: GACTCTGCCTTGCTGTTGTCACTCAGCACAGCCAGA...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGTGTCTCTGGCTGTGCTaGGTGACAACAGCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLCLWLC*VTTARQ Trigger: CTGCCTTGCTGTTGTCACTCAGCACAGCCAGAGACA...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCAGCACCTTTAGTACACCCTCCCTATCACAGAACTCAAAAGACAGCAAAGTGATGGGGCCCAAGTaGCAGCAGAGTGTCCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ASSTFSTPSLSQNSKDSKVMGPK*QQSVQR Trigger: CCTTTGGACACTCTGCTGGCACTTGGGCCCCATCAC...TTTGCTGTCTTTTGAGTTCTGTGATAGGGAGGGTGTACTAAAGGTGCTGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACGTGATGGGGCCCAAGTaGCAGCAGAGTGTCCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: WTQKSGISPQRIPVVWQHVMGPK*QQSVQR Trigger: CCTTTGGACACTCTGCTGGCACTTGGGCCCCATCAC...GTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGCCAGGGGCTAGCGTGGGGTTTTaGCCAGCTGGTGCAGTACTC | + |
|
Preference number: 2 (lower is better) Translates to: LVSSRSSWSTKRVLGQPGASVGF*PAGAVL Trigger: GAGTACTGCACCAGCTGGGCAAAACCCCACGCTAGC...CCCTGGCTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTACCTGCCTTTATGATGGGACCTCATTATCTCTCCACCAACAGACTTCAGGTTCTGCTCAGACTTaGGCCAGACCCCATCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: AATCLYDGTSLSLHQQTSGSAQT*ARPHLE Trigger: CTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACC...TGAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCAGAGTCCATACAGGGAACTGGAGGGAGACAGTCATGGGTCCTGGACACAGAATCCCTGTGGTTTaGCAACACAGCAAAGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: QGRVHTGNWRETVMGPGHRIPVV*QHSKGT Trigger: AGTACCTTTGCTGTGTTGCCAAACCACAGGGATTCT...GTGTCCAGGACCCATGACTGTCTCCCTCCAGTTCCCTGTATGGACTCTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGCCAGGGCTCCACAGATGGGTGTaGCCTTTTGCCCCTTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: LVSSRSSWSTKRVLGQPGLHRWV*PFAPSP Trigger: GGGTGAAGGGGCAAAAGGCCACACCCATCTGTGGAG...CCCTGGCTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR TCA 90 bp | TACCTACATCTTTTTCTGTGGCTATGGACCCAGAAATCAGGTATTTCTCCACAGCCCCATCTGGAGGTCTaGGCAGCCCAAGGTGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: YLHLFLWLWTQKSGISPQPHLEV*AAQGDG Trigger: CCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGG...CTGTGGAGAAATACCTGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGTCTGGCTGTGCTGAGTaGCAACAGCAAGGCAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKSGCAE*QQQGRV Trigger: GACTCTGCCTTGCTGTTGTCACTCAGCACAGCCAGA...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCAGAGTCCATACAGGGAACTGGAGGGAGACAGTCATGGGTCCTGGACACAATGGCTCATGTGACATaGTTCCAAATCTGCCACTAC | + |
|
Preference number: 2 (lower is better) Translates to: KAESIQGTGGRQSWVLDTMAHVT*FQICHY Trigger: GTAGTGGCAGATTTGGAACCATGTCACATGAGCCAT...TGTGTCCAGGACCCATGACTGTCTCCCTCCAGTTCCCTGTATGGACTCTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR CAA 90 bp | CTATCACAGAACTCAAAAGACAGCAAACAGAAACTCCTGCCACAGTaGAGGTCCAGTAGAAGCTGGCTGCCTGCTCACTTCCAGAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSQNSKDSKQKLLPQ*RSSRSWLPAHFQRA Trigger: TGCTCTCTGGAAGTGAGCAGGCAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTTTGAGTTCTGTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGCATTTTTCTTGTGCTTaGTGCCTCCTCCCCTCGACG | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKHFSCA*CLLPST Trigger: CGTCGAGGGGAGGAGGCATCAAGCACAAGAAAAATG...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGGTCCATACAGGGAACTaGAGGGAGACAGTCATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKVHTGN*RETVMG Trigger: ACCCATGACTGTCTCCCTCCAGTTCCCTGTATGGAC...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGCCAGGGAGAGCCGCCATCCACTaGCATCACTCTCATCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LVSSRSSWSTKRVLGQPGRAAIH*HHSHQL Trigger: TAGCTGATGAGAGTGATGCCAGTGGATGGCGGCTCT...CCCTGGCTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATATTTTCAGTCTCAGATTCTCACTCTACCGAGCAGAGCCAAGAGGCAAGTGCTGGGGTTTTCTCTaGGTCCTGTCTCTGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LNIFSLRFSLYRAEPRGKCWGFL*VLSLAV Trigger: CACAGCCAGAGACAGGACCCAGAGAAAACCCCAGCA...CTTGCCTCTTGGCTCTGCTCGGTAGAGTGAGAATCTGAGACTGAAAATATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGTGCTACCTGCCTTTATaGTGGGACCTCATTATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLCYLPL*WDLIIS Trigger: AGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCA...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGCATGCATTTTTCTTGTaGTTGATGCCTCCTCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKHAFFL*LMPPPL Trigger: GAGGGGAGGAGGCATCAAGCACAAGAAAAATGCATG...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGATGGCTCATGTGACATaGTTCCAAATCTGCCACTAC | + |
|
Preference number: 2 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLMAHVT*FQICHY Trigger: GTAGTGGCAGATTTGGAACCATGTCACATGAGCCAT...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCTGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGACAGTCATGGGTCCTaGACACACACAAAAGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: EAGCLLTSREQTMAFIMKDSHGS*THTKVC Trigger: ACACACTTTTGTGTGTGTCCAGGACCCATGACTGTC...CTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGGACAGTCATGGGTCCTaGACACACACAAAAGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKDSHGS*THTKVC Trigger: ACACACTTTTGTGTGTGTCCAGGACCCATGACTGTC...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATCTCTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGGGGGGTGGGGGAGTGTaGCAGTTTACACCAGATACT | + |
|
Preference number: 2 (lower is better) Translates to: RSLVSSRSSWSTKRVLGQGGGGV*QFTPDT Trigger: AGTATCTGGTGTAAACTGCCACACTCCCCCACCCCC...CTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAGAGATCT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAGAAACTGCACACAGATCTCGCATGCGTTTCATGCATATGGTGTCTGTACAGAGATGTTCCTGCCTaGAGCAACAGAATCCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LQKLHTDLACVSCIWCLYRDVPA*SNRILS Trigger: GCTGAGGATTCTGTTGCTCCAGGCAGGAACATCTCT...GTACAGACACCATATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTATGTTCATTCACCAGGAAGCTGGAGGTAGGTTTGTTTTAGACTGCAGCTCACTTGATAAGCTGTaGTCCTTATGCACCGCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GGMFIHQEAGGRFVLDCSSLDKL*SLCTAY Trigger: GTAGGCGGTGCATAAGGACCACAGCTTATCAAGTGA...GCTGCAGTCTAAAACAAACCTACCTCCAGCTTCCTGGTGAATGAACATACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR CAA 90 bp | CTGCTACTGAAGCCTGGAACTCATCTCTCTAAACCATTCGCACTGTaGCTTCAGAAACTGCACACAGATCTCGCATGCGTTTCATGCATA | + |
|
Preference number: 2 (lower is better) Translates to: LLLKPGTHLSKPFAL*LQKLHTDLACVSCI Trigger: TATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGCGAATGGTTTAGAGAGATGAGTTCCAGGCTTCAGTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGTGCTACCTGCCTTTATaGTGGGACCTCATTATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKCYLPL*WDLIIS Trigger: AGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCA...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACCAGATATCAAGGCTTTaGCAGACAGAGGCCATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WTQKSGISPQRIPVVWQHQISRL*QTEAIL Trigger: AAGAATGGCCTCTGTCTGCCAAAGCCTTGATATCTG...GTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR CAA 90 bp | GTACTCCTGAGGAAATCTCCTTTCTGTCTTTTGGGGTTAACTGTTTaGAGCGGCAAGTGCACAAGTCTCCACATGTCTCTTGAATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLLRKSPFCLLGLTV*SGKCTSLHMSLEFR Trigger: CCTGAATTCAAGAGACATGTGGAGACTTGTGCACTTGCCGCTCAAAACAGTTAACCCCAAAAGACAGAAAGGAGATTTCCTCAGGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATCTCTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGACTGAAGTTGTCACATaGGAAGAGGCAAGTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RSLVSSRSSWSTKRVLGQTEVVT*EEASPW Trigger: CCAGGGACTTGCCTCTTCTCATGTGACAACTTCAGT...CTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAGAGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTCCTTATGCACCGCCTACCCATTTTTCATGAAGAGGTTGTTATGCTTGTAGATCCTCAGCTAGCTTaGACAAGCTCCAGAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: VVLMHRLPIFHEEVVMLVDPQLA*TSSRNQ Trigger: TTGGTTTCTGGAGCTTGTCCAAGCTAGCTGAGGATC...TACAAGCATAACAACCTCTTCATGAAAAATGGGTAGGCGGTGCATAAGGACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGTGTGTGTGTGTGTCTAACGGCACGGCCATGCATTTTTCTTGTGCTTGATAGAATCCCTGTGGTTTaGCAACACAGCAAAGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: KSVCVCLTARPCIFLVLDRIPVV*QHSKGT Trigger: AGTACCTTTGCTGTGTTGCCAAACCACAGGGATTCT...ATCAAGCACAAGAAAAATGCATGGCCGTGCCGTTAGACACACACACACACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCTGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGCTTTTTCTGTGGCTATaGACCCAGAAATCAGGTATT | + |
|
Preference number: 2 (lower is better) Translates to: EAGCLLTSREQTMAFIMKLFLWL*TQKSGI Trigger: AATACCTGATTTCTGGGTCCATAGCCACAGAAAAAG...CTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCAGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGCTACATCTTTTTCTGTaGCTATGGACCCAGAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: WLPAHFQRADNGFYYEGKLHLFL*LWTQKS Trigger: TGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAG...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATCTCTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGTCTCCACATGTCTCTTaGATTCAGGTGTTAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RSLVSSRSSWSTKRVLGQSPHVS*IQVLGR Trigger: TCTGCCTAACACCTGAATTCAAGAGACATGTGGAGA...CTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAGAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAGCCTCCAGCACCTTTAGTACACCCTCCCTATCACAGAACTCAAAAGACAAGACAACGAGAAGAGTaGTTTATTCCAATCAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: GEPPAPLVHPPYHRTQKTRQREE*FIPIRY Trigger: ATATCTGATTGGAATAAACCACTCTTCTCGTTGTCT...TGTCTTTTGAGTTCTGTGATAGGGAGGGTGTACTAAAGGTGCTGGAGGCTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTATGTTCATTCACCAGGAAGCTGGAGGTAGGTTTGTTTTAGACTGCAGCCTACCACACTTACTCTaGCATTTAGTATTTTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: GGMFIHQEAGGRFVLDCSLPHLL*HLVFYL Trigger: CAGGTAAAATACTAAATGCCAGAGTAAGTGTGGTAG...GCTGCAGTCTAAAACAAACCTACCTCCAGCTTCCTGGTGAATGAACATACCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | TCTGCTCAGACTTGGGCCAGACCCCATCTGGAGGTCTaGGCAGCCCAAGGTGATGGGGCCCAAGTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SAQTWARPHLEV*AAQGDGAQVPA Trigger: TGCTGGCACTTGGGCCCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | CAGCACCATCCTATGTTACTCAGCCGAGCGCTGCAGTaGGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QHHPMLLSRALQ*EEQGAGSTGPV Trigger: GACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCGCTCGGCTGAGTAACATAGGATGGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR GCA 72 bp | AGCTCCAGCACCATCCTATGTTACTCAGCCGAGCGCTaGAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSSTILCYSAER*SARSRVQAALV Trigger: GACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCGCTCGGCTGAGTAACATAGGATGGTGCTGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR CCA 72 bp | TCCAGGGTTCTGCTCAGACTTGGGCCAGACCCCATCTaGAGGTCTGAGCAGCCCAAGGTGATGGGGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRVLLRLGPDPI*RSEQPKVMGPK Trigger: CTTGGGCCCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | GCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTaGTCCTACAGCCCCAGCATGAGTCCATCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARSRVQAALVQS*SYSPSMSPSHL Trigger: CAGATGAGATGGACTCATGCTGGGGCTGTAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR CCA 72 bp | CTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTaGCAGATCCTGAGAGCCGCCATCCACTGGCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLQSAAAPLLPT*QILRAAIHWHH Trigger: GTGATGCCAGTGGATGGCGGCTCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| 3UTR TCA 72 bp | TCGCATGCGTTTCATGCATATGGTGTCTGTACAGGTTaGGTGTGGGCATGCACACGTGCGGGGCCCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SHAFHAYGVCTG*VWACTRAGPRA Trigger: TGCTCTGGGCCCCGCACGTGTGCATGCCCACACTCAACCTGTACAGACACCATATGCATGAAACGCATGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | GCTGGGGTTTTCTCTGGGTCCTGTCTCTGGCTGTGCTaGGTGACAACAGCAAGGCAGAGTCCATACAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AGVFSGSCLWLC*VTTARQSPYRE Trigger: TTCCCTGTATGGACTCTGCCTTGCTGTTGTCACTCAGCACAGCCAGAGACAGGACCCAGAGAAAACCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | CTAGCATGTCTGTCTCCAAAGACTGCTGCAGTCTGCTaGGGCTCCACTGCTTCCTACTTGGCAGATCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LACLSPKTAAVC*GSTASYLADPE Trigger: CTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGACAGACATGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| 3UTR GCA 72 bp | ATCTCTCCACCAACAGACTTCACATTTCCAGGGTTCTaGTCAGACTTGGGCCAGACCCCATCTGGAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISPPTDFTFPGF*SDLGQTPSGGL Trigger: CAGACCTCCAGATGGGGTCTGGCCCAAGTCTGAGCAGAACCCTGGAAATGTGAAGTCTGTTGGTGGAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR CCA 72 bp | AAGGTCACAGGTGCCAGTCAACATATGTGGCCTGGCTaGAGATGGGCAGTTTGGGAACTCCCCTTTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: KVTGASQHMWPG*RWAVWELPFSW Trigger: CCATGAAAAGGGGAGTTCCCAAACTGCCCATCTCCAGCCAGGCCACATATGTTGACTGGCACCTGTGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR CCA 72 bp | AGTCAACATATGTGGCCTGGCTGGAGATGGGCAGTTTaGGAACTCCCCTTTTCATGGATTGACTTGTCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQHMWPGWRWAV*ELPFSWIDLSG Trigger: GCCCGACAAGTCAATCCATGAAAAGGGGAGTTCCCAAACTGCCCATCTCCAGCCAGGCCACATATGTTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGAGCCTCCAGCACCTTTAGTACACCCTCCCTATCACAGAACTCAAAAGACAGGCCATGCATTTTTCTaGTGCTTGATGCCTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GEPPAPLVHPPYHRTQKTGHAFF*CLMPPP Trigger: GGGAGGAGGCATCAAGCACAAGAAAAATGCATGGCC...TGTCTTTTGAGTTCTGTGATAGGGAGGGTGTACTAAAGGTGCTGGAGGCTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | ACTCAAAAGACAGCAAACAGAAACTCCTGCCACAGTTaGGGTCCAGTAGAAGCTGGCTGCCTGCTCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TQKTANRNSCHS*GPVEAGCLLTS Trigger: GGAAGTGAGCAGGCAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | CTCCTACAGCCCCAGCATGAGTCCATCTCATCTGGATaGTCAGAGTCTAGCATGTCTGTCTCCAAAGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLQPQHESISSG*SESSMSVSKDC Trigger: GCAGTCTTTGGAGACAGACATGCTAGACTCTGATCATCCAGATGAGATGGACTCATGCTGGGGCTGTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGCCAGATATCAAGGCTTaGGCAGACAGAGGCCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLPDIKA*ADRGHS Trigger: AGAATGGCCTCTGTCTGCCAAAGCCTTGATATCTGG...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGGAAGGGCCATGCATTTTTCTaGTGCTTGATGCCTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: WLPAHFQRADNGFYYEGKGHAFF*CLMPPP Trigger: GGGAGGAGGCATCAAGCACAAGAAAAATGCATGGCC...CTTCCCTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCTGTCCACCTTGGTTCCTTaGGTGATTTTCCAATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QRLLQSAAAPLLPTWQILSTLVP*VIFQFL Trigger: TAGAAATTGGAAAATCACCAAAGGAACCAAGGTGGA...CAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | CAAGGCTTTGGCAGACAGAGGCCATTCTTACATCTGTaGTCATGGCTGCTACCTGCCTTTATGATGGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: QGFGRQRPFLHL*SWLLPAFMMGP Trigger: AGGTCCCATCATAAAGGCAGGTAGCAGCCATGATCACAGATGTAAGAATGGCCTCTGTCTGCCAAAGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | CATGTGACATGGTTCCAAATCTGCCACTACCCTCCATaGGGTCCCTTACTGGCCTCCAGATATCAAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HVTWFQICHYPP*GPLLASRYQGF Trigger: AAAGCCTTGATATCTGGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCAGATTTGGAACCATGTCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | ATACGGATGATGGGACTTCCAACTGAAGTTGTCACATaGGAAGAGGCAAGTCCCTGGCCCACTACTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: IRMMGLPTEVVT*EEASPWPTTRQ Trigger: CTGTCTAGTAGTGGGCCAGGGACTTGCCTCTTCTCATGTGACAACTTCAGTTGGAAGTCCCATCATCCGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | AGTGCATTGTCACCTCCAGAGCCCAAATCCCGAGGCTaGCAAGCTCCAGTTTCCTTATCTGTAAGATACGGA | + |
|
Preference number: 3 (lower is better) Translates to: SALSPPEPKSRG*QAPVSLSVRYG Trigger: TCCGTATCTTACAGATAAGGAAACTGGAGCTTGTCAGCCTCGGGATTTGGGCTCTGGAGGTGACAATGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | CAATCAGAACTTACACATCCTAATCTCCGCCCTCTGTaGAAGAGTGCATTGTCACCTCCAGAGCCCAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: QSELTHPNLRPL*KSALSPPEPKS Trigger: GGATTTGGGCTCTGGAGGTGACAATGCACTCTTGCACAGAGGGCGGAGATTAGGATGTGTAAGTTCTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR CCA 72 bp | TCTCTGCCTACTATCCTGAGACAGGGTATCCTGAACTaGAAACTTGTTACTTCAGATAGGCGGGATGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLPTILRQGILN*KLVTSDRRDGQ Trigger: CTGGCCATCCCGCCTATCTGAAGTAACAAGTTTCCAGTTCAGGATACCCTGTCTCAGGATAGTAGGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCTGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGCCAGATATCAAGGCTTaGGCAGACAGAGGCCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EAGCLLTSREQTMAFIMKPDIKA*ADRGHS Trigger: AGAATGGCCTCTGTCTGCCAAAGCCTTGATATCTGG...CTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | CTTCAGAAACTGCACACAGATCTCGCATGCGTTTCATaGATATGGTGTCTGTACAGGTTGAGTGTGGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LQKLHTDLACVS*IWCLYRLSVGM Trigger: CATGCCCACACTCAACCTGTACAGACACCATATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR CCA 72 bp | TTAGACTGCAGCCTTCATCCTCTGGAAAGACACACATaGCATGCGTTCCTCTGTCACTTGATAAGCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LDCSLHPLERHT*HAFLCHLISCG Trigger: ACCACAGCTTATCAAGTGACAGAGGAACGCATGCCATGTGTGTCTTTCCAGAGGATGAAGGCTGCAGTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | AGTGTGGCAGTTTACACCAGATACTGTAGAGGCAGCTaGAGGTGGAGGGTGAGATATAGTTATTTTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SVAVYTRYCRGS*RWRVRYSYFAC Trigger: ACAGGCAAAATAACTATATCTCACCCTCCACCTGCAGCTGCCTCTACAGTATCTGGTGTAAACTGCCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | GCACTGTTGCTTCAGAAACTGCACACAGATCTCGCATaGGTTTCATGCATATGGTGTCTGTACAGGTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ALLLQKLHTDLA*VSCIWCLYRLS Trigger: ACTCAACCTGTACAGACACCATATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | AGCCTGGAACTCATCTCTCTAAACCATTCGCACTGTTaGTTCAGAAACTGCACACAGATCTCGCATGCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLELISLNHSHC*FRNCTQISHAF Trigger: AAACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGCGAATGGTTTAGAGAGATGAGTTCCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | TTATCTTATAGGGAGGTCATGATCATATTCACCACCTaGCTCATACTGAGCTTCTCCACAGATGGGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSYREVMIIFTT*LILSFSTDGCG Trigger: GCCACACCCATCTGTGGAGAAGCTCAGTATGAGGCAGGTGGTGAATATGATCATGACCTCCCTATAAGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| 3UTR CCA 72 bp | AAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTaGCAACACAGCAAAGGTACTGGCTGTCATGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KSGISPQRIPVV*QHSKGTGCHGH Trigger: ATGCCCATGACAGCCAGTACCTTTGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR CCA 72 bp | CAGCAGCCTAGCACTCTGTACCTACATCTTTTTCTGTaGCTATGGACCCAGAAATCAGGTATTTCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: QQPSTLYLHLFL*LWTQKSGISPQ Trigger: CTGTGGAGAAATACCTGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAGGTACAGAGTGCTAGGCTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | TCTTACATCTGTGATCATGGCTGCTACCTGCCTTTATaGTGGGACCTCATTATCTCTCCACCAACAGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SYICDHGCYLPL*WDLIISPPTDF Trigger: GAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCAGCCATGATCACAGATGTAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | TGCGTTCCTCTGTCACTTGATAAGCTGTGGTCCTTATaGACCGCCTACCCATTTTTCATGAAGAGGTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CVPLSLDKLWSL*TAYPFFMKRLL Trigger: TAACAACCTCTTCATGAAAAATGGGTAGGCGGTGCATAAGGACCACAGCTTATCAAGTGACAGAGGAACGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | AATCCTCAGCTTAAGGGAGCAGCCACACTCAACTGCTaGAATCATTCATTACTGTCACGTATGTCTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NPQLKGAATLNC*NHSLLSRMSSE Trigger: CTCTGAAGACATACGTGACAGTAATGAATGATTTCAGCAGTTGAGTGTGGCTGCTCCCTTAAGCTGAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | TCTGTTCAACCTAATCTAGAGCTATACAGTGAGGTCTaGAGGCCTGACTATAAGGTTATAGACTGCTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SVQPNLELYSEV*RPDYKVIDCWT Trigger: GGTCCAGCAGTCTATAACCTTATAGTCAGGCCTTCAGACCTCACTGTATAGCTCTAGATTAGGTTGAACAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR GCA 72 bp | ATCTCTCTAAACCATTCGCACTGTTGCTTCAGAAACTaGACACAGATCTCGCATGCGTTTCATGCATATGGT | + |
|
Preference number: 3 (lower is better) Translates to: ISLNHSHCCFRN*TQISHAFHAYG Trigger: ACCATATGCATGAAACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGCGAATGGTTTAGAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCTCTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGGACTTCCAACTGAAGTaGTCACATGAGAAGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RSLVSSRSSWSTKRVLGQDFQLK*SHEKRQ Trigger: TTGCCTCTTCTCATGTGACAACTTCAGTTGGAAGTC...CTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAGAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| 3UTR TCA 72 bp | CTCTTGTGCACAGTTGATCTCTCTTGGTCCCAACAATaGCTTAAGTACAAGCCAAAGGATTGGAAAATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLCTVDLSWSQQ*LKYKPKDWKIV Trigger: CACTATTTTCCAATCCTTTGGCTTGTACTTAAGTCATTGTTGGGACCAAGAGAGATCAACTGTGCACAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| CDS-3UTR TCA 90 bp | GACCCCATCTGGAGGTCTGAGCAGCCCAAGGTGATGGGGCCCAAGTGCCAGCAGGCTTCCCTCGCCGGATaGAGTACAGCAAGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPIWRSEQPKVMGPKCQQASLAG*STASPG Trigger: CCCTGGGCTTGCTGTACTTCATCCGGCGAGGGAAGC...CTGCTGGCACTTGGGCCCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| CDS-3UTR CCA 90 bp | GACCCCATCTGGAGGTCTGAGCAGCCCAAGGTGATGGGGCCCAAGTGCCAGCAGTCCGCGTCGAACATCTaGTCCAGGGACGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPIWRSEQPKVMGPKCQQSASNI*SRDGLL Trigger: CAGCAGCCCGTCCCTGGACCAGATGTTCGACGCGGA...CTGCTGGCACTTGGGCCCCATCACCTTGGGCTGCTCAGACCTCCAGATGGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTGCTCCTACAGCCCGACGAAGGACATCATTaGGAGCCGGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCEEQGAGSTGPVLLLQPDEGHH*EPAWRG Trigger: ACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTC...GGGCTGTAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCTGAGAGCGCCGGCCTGGAGGGGTaGAGAAGCCCAGGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TAAVCCGSTASYLADPESAGLEG*RSPGSP Trigger: CGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGC...GCTCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| CDS-3UTR GCA 90 bp | TACTCAGCCGAGCGCTGCAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGGTGAAATCCAGGCACTaGTTCCCTCGCCGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSAERCSARSRVQAALVQVKSRH*FPRRMK Trigger: CTTCATCCGGCGAGGGAAGCAGTGCCTGGATTTCAC...CTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCGCTCGGCTGAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| CDS-3UTR TCA 90 bp | CGAGCGCTGCAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTGCTCAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RALQCEEQGAGSTGPVLLSRRSA*VRSATG Trigger: TCCTGTCGCAGATCGTACTCATGCAGACCGTCTACT...GAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGCAGCGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCTGTCTCCAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTGCCGGCCTGGAGGGGTaGAGAAGCCCAGGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HVCLQRLLQSAAAPLLPTAGLEG*RSPGSP Trigger: CGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGC...AGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGACAGACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTTGCTCCTACAGCCCAGCAGCCCAGGAGGTaGAAGAAATGCACAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVRGAGCRQHWSSLAPTAQQPRR*KKCTVT Trigger: TGTCACTGTGCATTTCTTTCACCTCCTGGGCTGCTG...GGCTGTAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGTTAGGCAGAGTGAAGGGAGAGGCAGGGCCAAGACTTCAGGTCTCCAGTCCGCGTCGAACATCTaGTCCAGGGACGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGVRQSEGRGRAKTSGLQSASNI*SRDGLL Trigger: CAGCAGCCCGTCCCTGGACCAGATGTTCGACGCGGA...CTGGAGACCTGAAGTCTTGGCCCTGCCTCTCCCTTCACTCTGCCTAACACCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCTGTCCGCGTCGAACATCTaGTCCAGGGACGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLLQSAAAPLLPTWQILSASNI*SRDGLL Trigger: CAGCAGCCCGTCCCTGGACCAGATGTTCGACGCGGA...CAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTTCCAAATCTGCCACTACCCTCCATGAGGTCCCTTACTGGCCTCCAGATGCCGGCCTGGAGGGGTaGAGAAGCCCAGGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HGSKSATTLHEVPYWPPDAGLEG*RSPGSP Trigger: CGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGC...ATCTGGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCAGATTTGGAACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| 3UTR CAA 72 bp | ACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTaGGCAGATCCTGAGAGCCGCCATCCACTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAAVCCGSTASY*ADPESRHPLAS Trigger: TGATGCCAGTGGATGGCGGCTCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| 3UTR CAA 72 bp | TGCGAGGAGCAGGGTGCAGGCAGCACTGGTCCAGTCTaGCTCCTACAGCCCCAGCATGAGTCCATCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CEEQGAGSTGPV*LLQPQHESISS Trigger: AGATGAGATGGACTCATGCTGGGGCTGTAGGAGCAAGACTGGACCAGTGCTGCCTGCACCCTGCTCCTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGTTAGGCAGAGTGAAGGGAGAGGCAGGGCCAAGACTTCAGGTCTCCAGGACGAAGGACATCATTaGGAGCCGGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGVRQSEGRGRAKTSGLQDEGHH*EPAWRG Trigger: ACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTC...CTGGAGACCTGAAGTCTTGGCCCTGCCTCTCCCTTCACTCTGCCTAACACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCGACGAAGGACATCATTaGGAGCCGGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKDCCSLLRLHCFLLGRSDEGHH*EPAWRG Trigger: ACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTC...GGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACAGCAGCCGGCCTGGAGGGGTaGAGAAGCCCAGGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRNQVFLHRESLWFGNTAAGLEG*RSPGSP Trigger: CGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGC...TGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTACCTGCCTTTATGATGGGACCTCATTATCTCTCCACCAACAGACTTCAGCCGGCCTGGAGGGGTaGAGAAGCCCAGGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AATCLYDGTSLSLHQQTSAGLEG*RSPGSP Trigger: CGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGC...TGAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCACCAACAGACTTCACATTTCCAGGGTTCTGCTCAGACTTGGGCCAGACGCAATGCACACAGCCTaGACCAGCCACCAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTNRLHISRVLLRLGPDAMHTA*TSHQVS Trigger: GCTGACCTGGTGGCTGGTCCAGGCTGTGTGCATTGC...GTCTGGCCCAAGTCTGAGCAGAACCCTGGAAATGTGAAGTCTGTTGGTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | AAAGACAGCAAACAGAAACTCCTGCCACAGTTGAGGTCCAGTAGAAGCTGGCTGGCTTCCCTCGCCGGATaGAGTACAGCAAGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KDSKQKLLPQLRSSRSWLASLAG*STASPG Trigger: CCCTGGGCTTGCTGTACTTCATCCGGCGAGGGAAGC...CAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CCA 90 bp | GACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACAGTCCGCGTCGAACATCTaGTCCAGGGACGGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DPEIRYFSTENPCGLATQSASNI*SRDGLL Trigger: CAGCAGCCCGTCCCTGGACCAGATGTTCGACGCGGA...CTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | ATGTCTGTCTCCAAAGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: MSVSKDCCSLLRLHCFLLSRRSA*VRSATG Trigger: TCCTGTCGCAGATCGTACTCATGCAGACCGTCTACT...AAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCTTTGGAGACAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| CDS-3UTR TCA 90 bp | GCTGCTACCTGCCTTTATGATGGGACCTCATTATCTCTCCACCAACAGACTTCAGACGAAGGACATCATTaGGAGCCGGCCTGGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AATCLYDGTSLSLHQQTSDEGHH*EPAWRG Trigger: ACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTC...TGAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | GAAGCTGGCTGCCTGCTCACTTCCAGAGAGCAGACAATGGCTTTTATTATGAAGGACGAAGGACATCATTaGGAGCCGGCCTGGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: EAGCLLTSREQTMAFIMKDEGHH*EPAWRG Trigger: ACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTC...CTTCATAATAAAAGCCATTGTCTGCTCTCTGGAAGTGAGCAGGCAGCCAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | CATGGTTCCAAATCTGCCACTACCCTCCATGAGGTCCCTTACTGGCCTCCAGATCAGCAGCCCAGGAGGTaGAAGAAATGCACAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: HGSKSATTLHEVPYWPPDQQPRR*KKCTVT Trigger: TGTCACTGTGCATTTCTTTCACCTCCTGGGCTGCTG...ATCTGGAGGCCAGTAAGGGACCTCATGGAGGGTAGTGGCAGATTTGGAACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCCTTTATGATGGGACCTCATTATCTCTCCACCAACAGACTTCACATTTCGCTTCCCTCGCCGGATaGAGTACAGCAAGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TCLYDGTSLSLHQQTSHFASLAG*STASPG Trigger: CCCTGGGCTTGCTGTACTTCATCCGGCGAGGGAAGC...GAAATGTGAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR GCA 90 bp | GGTGAGCCTCCAGCACCTTTAGTACACCCTCCCTATCACAGAACTCAAAAGACAGTGAAATCCAGGCACTaGTTCCCTCGCCGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GEPPAPLVHPPYHRTQKTVKSRH*FPRRMK Trigger: CTTCATCCGGCGAGGGAAGCAGTGCCTGGATTTCAC...TGTCTTTTGAGTTCTGTGATAGGGAGGGTGTACTAAAGGTGCTGGAGGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CCA 90 bp | AACAGTAGAGGCAGGCAGATCTCTTGTGAGTTCAAGATCATCCTGGTCTACAAATCCGCGTCGAACATCTaGTCCAGGGACGGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSRGRQISCEFKIILVYKSASNI*SRDGLL Trigger: CAGCAGCCCGTCCCTGGACCAGATGTTCGACGCGGA...TTTGTAGACCAGGATGATCTTGAACTCACAAGAGATCTGCCTGCCTCTACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| CDS-3UTR GCA 90 bp | GCCTCCAGCACCTTTAGTACACCCTCCCTATCACAGAACTCAAAAGACAGCAAAGTGAAATCCAGGCACTaGTTCCCTCGCCGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: ASSTFSTPSLSQNSKDSKVKSRH*FPRRMK Trigger: CTTCATCCGGCGAGGGAAGCAGTGCCTGGATTTCAC...TTTGCTGTCTTTTGAGTTCTGTGATAGGGAGGGTGTACTAAAGGTGCTGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTGTGTGTGTGTCTAACGGCACGGCCATGCATTTTTCTTGTGCTTGATGCAATGCACACAGCCTaGACCAGCCACCAGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KSVCVCLTARPCIFLVLDAMHTA*TSHQVS Trigger: GCTGACCTGGTGGCTGGTCCAGGCTGTGTGCATTGC...ATCAAGCACAAGAAAAATGCATGGCCGTGCCGTTAGACACACACACACACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | TATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACAGCAAAGGTACTGGCTGAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: YFSTENPCGLATQQRYWLSRRSA*VRSATG Trigger: TCCTGTCGCAGATCGTACTCATGCAGACCGTCTACT...CAGCCAGTACCTTTGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | CCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACAGCACAGCAGCCCAGGAGGTaGAAGAAATGCACAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: PRNQVFLHRESLWFGNTAQQPRR*KKCTVT Trigger: TGTCACTGTGCATTTCTTTCACCTCCTGGGCTGCTG...TGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR CAA 72 bp | AACTCAAAAGACAGCAAACAGAAACTCCTGCCACAGTaGAGGTCCAGTAGAAGCTGGCTGCCTGCTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: NSKDSKQKLLPQ*RSSRSWLPAHF Trigger: GAAGTGAGCAGGCAGCCAGCTTCTACTGGACCTCAACTGTGGCAGGAGTTTCTGTTTGCTGTCTTTTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | AGCCTAGCACTCTGTACCTACATCTTTTTCTGTGGCTATGGACCCAGAAATCAGAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLALCTYIFFCGYGPRNQSRRSA*VRSATG Trigger: TCCTGTCGCAGATCGTACTCATGCAGACCGTCTACT...CTGATTTCTGGGTCCATAGCCACAGAAAAAGATGTAGGTACAGAGTGCTAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| 3UTR CAA 72 bp | GAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTaGGCAACACAGCAAAGGTACTGGCTGTCATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EIRYFSTENPCG*ATQQRYWLSWA Trigger: TGCCCATGACAGCCAGTACCTTTGCTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR TCA 90 bp | ATCTCTTGTGAGTTCAAGATCATCCTGGTCTACAAAGAGAGTTCTAGGACAGCCAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: ISCEFKIILVYKESSRTASRRSA*VRSATG Trigger: TCCTGTCGCAGATCGTACTCATGCAGACCGTCTACT...GGCTGTCCTAGAACTCTCTTTGTAGACCAGGATGATCTTGAACTCACAAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| 3UTR CAA 72 bp | AAGCCTGGAACTCATCTCTCTAAACCATTCGCACTGTaGCTTCAGAAACTGCACACAGATCTCGCATGCGTT | + |
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Preference number: 4 (lower is better) Translates to: KPGTHLSKPFAL*LQKLHTDLACV Trigger: AACGCATGCGAGATCTGTGTGCAGTTTCTGAAGCAACAGTGCGAATGGTTTAGAGAGATGAGTTCCAGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| 3UTR CAA 72 bp | AGGAAATCTCCTTTCTGTCTTTTGGGGTTAACTGTTTaGAGCGGCAAGTGCACAAGTCTCCACATGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RKSPFCLLGLTV*SGKCTSLHMSL Trigger: AAGAGACATGTGGAGACTTGTGCACTTGCCGCTCAAAACAGTTAACCCCAAAAGACAGAAAGGAGATTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| CDS GCA 90 bp | GAGCTCCGTCCGCATGCACAGGTACTCCCCGATGACGGCCATGAGTaGAATGCACACAGCCTGGACCAGCCACCAGGTCAGCGCCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: ELRPHAQVLPDDGHE*NAHSLDQPPGQRRG Trigger: CCCTCGGCGCTGACCTGGTGGCTGGTCCAGGCTGTGTGCATTGCACTCATGGCCGTCATCGGGGAGTACCTGTGCATGCGGACGGAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS TCA 90 bp | CAAGCCCAGGGCACAGGTGAGGGCGTTGAGGACGAAGGACATCATTaGGAGCCGGCCTGGAGGGGTGGAGAAGCCCAGGATCTCCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: QAQGTGEGVEDEGHH*EPAWRGGEAQDLRV Trigger: GACGCGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCCTCAACGCCCTCACCTGTGCCCTGGGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS TCA 90 bp | CCAGCGCCAGCCACAGGCCCAGAGAGCCATAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGATTAGCAACGGGTCCCACACGTAGC | + |
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Preference number: 5 (lower is better) Translates to: PAPATGPESHSRRSA*VRSATGLATGPTRS Trigger: GCTACGTGTGGGACCCGTTGCTAATCCTGTCGCAGATCGTACTCATGCAGACCGTCTACTATGGCTCTCTGGGCCTGTGGCTGGCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| CDS-3UTR CAA 90 bp | GCACGGCCATGCATTTTTCTTGTGCTTGATGCCTCCTCCCCTCGACGTCCTGTCGGACGAAGGACATCATaGAGAGCCGGCCTGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: ARPCIFLVLDASSPRRPVGRRTS*RAGLEG Trigger: CCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCC...GACAGGACGTCGAGGGGAGGAGGCATCAAGCACAAGAAAAATGCATGGCCGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | AGACTGCTGCAGTCTGCTGCGGCTCCACTGCTTCCTACTTGGCAGATCCTGAGAGGACGAAGGACATCATaGAGAGCCGGCCTGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: RLLQSAAAPLLPTWQILRGRRTS*RAGLEG Trigger: CCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCC...TCTCAGGATCTGCCAAGTAGGAAGCAGTGGAGCCGCAGCAGACTGCAGCAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| CDS-3UTR CAA 90 bp | CAGGTCTCCAGAGGAGGTATGTTCATTCACCAGGAAGCTGGAGGTAGGTTTGTTGGACGAAGGACATCATaGAGAGCCGGCCTGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QVSRGGMFIHQEAGGRFVGRRTS*RAGLEG Trigger: CCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCC...AACAAACCTACCTCCAGCTTCCTGGTGAATGAACATACCTCCTCTGGAGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125086.2 ENSMUST00000138268.8 |
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| CDS-3UTR CAA 90 bp | CCCAGCTGGTGCAGTACTCCTGAGGAAATCTCCTTTCTGTCTTTTGGGGTTAACCTGAGGGGGATCTCCTaGAGCTCCGTCCGCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: PSWCSTPEEISFLSFGVNLRGIS*SSVRMH Trigger: GTGCATGCGGACGGAGCTCAAGGAGATCCCCCTCAG...GTTAACCCCAAAAGACAGAAAGGAGATTTCCTCAGGAGTACTGCACCAGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | GCTGCTACCTGCCTTTATGATGGGACCTCATTATCTCTCCACCAACAGACTTCACTGAGGGGGATCTCCTaGAGCTCCGTCCGCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: AATCLYDGTSLSLHQQTSLRGIS*SSVRMH Trigger: GTGCATGCGGACGGAGCTCAAGGAGATCCCCCTCAG...TGAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGTAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | GACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACAGCTGAGGGGGATCTCCTaGAGCTCCGTCCGCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: DPEIRYFSTENPCGLATQLRGIS*SSVRMH Trigger: GTGCATGCGGACGGAGCTCAAGGAGATCCCCCTCAG...CTGTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | ACCTGCCTTTATGATGGGACCTCATTATCTCTCCACCAACAGACTTCACATTTCGGACGAAGGACATCATaGAGAGCCGGCCTGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TCLYDGTSLSLHQQTSHFGRRTS*RAGLEG Trigger: CCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCC...GAAATGTGAAGTCTGTTGGTGGAGAGATAATGAGGTCCCATCATAAAGGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGCCTCCAGCACCTTTAGTACACCCTCCCTATCACAGAACTCAAAAGACAGCACAGGTGAGGGCGTaGAGGACGAAGGACATCATT | + |
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Preference number: 5 (lower is better) Translates to: GEPPAPLVHPPYHRTQKTAQVRA*RTKDII Trigger: AATGATGTCCTTCGTCCTCAACGCCCTCACCTGTGC...TGTCTTTTGAGTTCTGTGATAGGGAGGGTGTACTAAAGGTGCTGGAGGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | AGCCCCAGCATGAGTCCATCTCATCTGGATGATCAGAGTCTAGCATGTCTGTCTGCACAGGTGAGGGCGTaGAGGACGAAGGACATCATT | + |
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Preference number: 5 (lower is better) Translates to: SPSMSPSHLDDQSLACLSAQVRA*RTKDII Trigger: AATGATGTCCTTCGTCCTCAACGCCCTCACCTGTGC...AGACAGACATGCTAGACTCTGATCATCCAGATGAGATGGACTCATGCTGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125086.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTCTCCTCTTTATTATTCCAGGGTTACCATCCAAGTCACTCAGTAGGCTTGGACGAAGGACATCATaGAGAGCCGGCCTGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFLLFIIPGLPSKSLSRLGRRTS*RAGLEG Trigger: CCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCC...AAGCCTACTGAGTGACTTGGATGGTAACCCTGGAATAATAAAGAGGAGAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142892.8 |
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| CDS-3UTR CAA 90 bp | TGGACCCAGAAATCAGGTATTTCTCCACAGAGAATCCCTGTGGTTTGGCAACACGCACAGGTGAGGGCGTaGAGGACGAAGGACATCATT | + |
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Preference number: 5 (lower is better) Translates to: WTQKSGISPQRIPVVWQHAQVRA*RTKDII Trigger: AATGATGTCCTTCGTCCTCAACGCCCTCACCTGTGC...GTGTTGCCAAACCACAGGGATTCTCTGTGGAGAAATACCTGATTTCTGGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS CCA 72 bp | GGGGTGGAGAAGCCCAGGATCTCCGCGTCGAACATCTaGTCCAGGGACGGGCTGCTGCGCACCAGCGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVEKPRISASNI*SRDGLLRTSAS Trigger: GGACGCGCTGGTGCGCAGCAGCCCGTCCCTGGACCAGATGTTCGACGCGGAGATCCTGGGCTTCTCCACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| CDS CCA 72 bp | TCCCCGATGACGGCCATGAGTGCAATGCACACAGCCTaGACCAGCCACCAGGTCAGCGCCGAGGGGAAACGG | + |
|
Preference number: 6 (lower is better) Translates to: SPMTAMSAMHTA*TSHQVSAEGKR Trigger: CCGTTTCCCCTCGGCGCTGACCTGGTGGCTGGTCCAGGCTGTGTGCATTGCACTCATGGCCGTCATCGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 |
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| CDS CCA 72 bp | GGACGAAGGACATCATTGAGAGCCGGCCTGGAGGGGTaGAGAAGCCCAGGATCTCCGCGTCGAACATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRTSLRAGLEG*RSPGSPRRTSG Trigger: ACCAGATGTTCGACGCGGAGATCCTGGGCTTCTCCACCCCTCCAGGCCGGCTCTCAATGATGTCCTTCGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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| CDS TCA 72 bp | GCCACAGGCCCAGAGAGCCATAGTAGACGGTCTGCATaGGTACGATCTGCGACAGGATTAGCAACGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ATGPESHSRRSA*VRSATGLATGP Trigger: GGGACCCGTTGCTAATCCTGTCGCAGATCGTACTCATGCAGACCGTCTACTATGGCTCTCTGGGCCTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072452.11 ENSMUST00000109352.8 ENSMUST00000125086.2 ENSMUST00000138268.8 ENSMUST00000142892.8 |
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