Pregenerated sensors for SYPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027887Ensembl transcript IDs: ENSMUST00000141387.4
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CCCGCTTCAGGCCTGACTAGGCAAAGTGGTGGTGCCAGCCCTGGTTaGAGAGGACACGAGTCTCATGAGGACAGAGCTGCCCTTGGCACT | + |
Preference number: 1 (lower is better) Translates to: PASGLTRQSGGASPG*RGHESHEDRAALGT Trigger: AGTGCCAAGGGCAGCTCTGTCCTCATGAGACTCGTGTCCTCTCCAACCAGGGCTGGCACCACCACTTTGCCTAGTCAGGCCTGAAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 90 bp | TATGGATCTGGGTCCCGAAATGAAGAAGCACCAATAGCATCGGGCTaGCCAGGACTGGGGAAGGATGGGGCCTGGCTACTGCATGGAGGC | + |
Preference number: 1 (lower is better) Translates to: YGSGSRNEEAPIASG*PGLGKDGAWLLHGG Trigger: GCCTCCATGCAGTAGCCAGGCCCCATCCTTCCCCAGTCCTGGGCAGCCCGATGCTATTGGTGCTTCTTCATTTCGGGACCCAGATCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 90 bp | CAGACAAGAAGCACTGAGATCCTGCCGTTTGCTGCCCCAGCAGGATaGGGGATAGGAAGCCAGTGGAGGTCTGCCCAGGTTACCAACAGC | + |
Preference number: 1 (lower is better) Translates to: QTRSTEILPFAAPAG*GIGSQWRSAQVTNS Trigger: GCTGTTGGTAACCTGGGCAGACCTCCACTGGCTTCCTATCCCTCATCCTGCTGGGGCAGCAAACGGCAGGATCTCAGTGCTTCTTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 90 bp | CCCATGTATCCTTGTCCCGGGACTCCTGGGCATCTCATGTCACGATaGTCCTTCAGGCCCTCCCAAAGCCCACAAAACCAAGGCCGAGAA | + |
Preference number: 1 (lower is better) Translates to: PMYPCPGTPGHLMSR*SFRPSQSPQNQGRE Trigger: TTCTCGGCCTTGGTTTTGTGGGCTTTGGGAGGGCCTGAAGGACCATCGTGACATGAGATGCCCAGGAGTCCCGGGACAAGGATACATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 90 bp | GTTTGCTGCCCCAGCAGGATGAGGGATAGGAAGCCAGTGGAGGTCTaGCCAGGTTACCAACAGCTGATGCCCACCCATCCATTCTCTCAA | + |
Preference number: 1 (lower is better) Translates to: VCCPSRMRDRKPVEV*PGYQQLMPTHPFSQ Trigger: TTGAGAGAATGGATGGGTGGGCATCAGCTGTTGGTAACCTGGGCAGACCTCCACTGGCTTCCTATCCCTCATCCTGCTGGGGCAGCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 90 bp | CACAGAACTCAGGGCAAGGTTGCCAGTCAGCTTCCCCAAGTAAGATaGTTCAGTCCAGGCAGCAGACAAGAAGCACTGAGATCCTGCCGT | + |
Preference number: 1 (lower is better) Translates to: HRTQGKVASQLPQVR*FSPGSRQEALRSCR Trigger: ACGGCAGGATCTCAGTGCTTCTTGTCTGCTGCCTGGACTGAAGCATCTTACTTGGGGAAGCTGACTGGCAACCTTGCCCTGAGTTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 90 bp | CCATTCTCTCAAATCTCAAAGTCCAGAATGATGGGGGAAGGGAGTTaGAGGAGGAGGGAGAGGAGGAGCAGGAGGAAGAGGAAGAGGAGG | + |
Preference number: 1 (lower is better) Translates to: PFSQISKSRMMGEGS*RRRERRSRRKRKRR Trigger: CCTCCTCTTCCTCTTCCTCCTGCTCCTCCTCTCCCTCCTCCTCCAACTCCCTTCCCCCATCATTCTGGACTTTGAGATTTGAGAGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 90 bp | GGAGAGGAGACACACCAAAGACAAATATGGATCTGGGTCCCGAAATaGAGAAGCACCAATAGCATCGGGCTGCCCAGGACTGGGGAAGGA | + |
Preference number: 1 (lower is better) Translates to: GEETHQRQIWIWVPK*RSTNSIGLPRTGEG Trigger: TCCTTCCCCAGTCCTGGGCAGCCCGATGCTATTGGTGCTTCTTCATTTCGGGACCCAGATCCATATTTGTCTTTGGTGTGTCTCCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 90 bp | TGCCAGCAACTTTCCTCACTTTCTTCCTTGGTGCTGCAATGTACTTaGAACTCTCTCTGCTCCCATTGGGTCCGGGTCTCATGTGGACCC | + |
Preference number: 1 (lower is better) Translates to: CQQLSSLSSLVLQCT*NSLCSHWVRVSCGP Trigger: GGGTCCACATGAGACCCGGACCCAATGGGAGCAGAGAGAGTTGCAAGTACATTGCAGCACCAAGGAAGAAAGTGAGGAAAGTTGCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 90 bp | CACATGGTAAAGTCTACCAGGGCAAAGGGCAAGTTCCCTGCTTGTTaGCCTCCTGCAATAGCTAGAGAAACCAGACACCTCTCCCGCTTC | + |
Preference number: 1 (lower is better) Translates to: HMVKSTRAKGKFPAC*PPAIARETRHLSRF Trigger: GAAGCGGGAGAGGTGTCTGGTTTCTCTAGCTATTGCAGGAGGCCAACAAGCAGGGAACTTGCCCTTTGCCCTGGTAGACTTTACCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 90 bp | AGCACACTGGGCTCTGGGAGGGCTAGAGATAGGATACAGATTAGATaGCAGTTATTGAGGGATGCCACAAAATCACTGGTGGGCCCTCCA | + |
Preference number: 1 (lower is better) Translates to: STLGSGRARDRIQIR*QLLRDATKSLVGPP Trigger: TGGAGGGCCCACCAGTGATTTTGTGGCATCCCTCAATAACTGGCATCTAATCTGTATCCTATCTCTAGCCCTCCCAGAGCCCAGTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 90 bp | GTTAAGGATTCTGAGCCCTGGGCCCCCAAGAAATACATCTTGATGTaGGTAGCATTGAGGAAGGCAAGGGGGTTGGAGAGGGTCGATCAT | + |
Preference number: 1 (lower is better) Translates to: VKDSEPWAPKKYILM*VALRKARGLERVDH Trigger: ATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAATGCTACCCACATCAAGATGTATTTCTTGGGGGCCCAGGGCTCAGAATCCTTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 90 bp | AAGCACCACAGAACAACATGCAACATTCTCCCCACATCCTCGATCTaGAATCCCAGAAATAGGAGGCCCATGGTCAGGATGTTGAAGGGG | + |
Preference number: 1 (lower is better) Translates to: KHHRTTCNILPTSSI*NPRNRRPMVRMLKG Trigger: CCCCTTCAACATCCTGACCATGGGCCTCCTATTTCTGGGATTGCAGATCGAGGATGTGGGGAGAATGTTGCATGTTGTTCTGTGGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 90 bp | CACTACAGTGAGAAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTaGGTCACAGATGGTAGGAGAGCAAACGGAGGCAGCATTGTGGAA | + |
Preference number: 1 (lower is better) Translates to: HYSEKREAYGPRFVL*VTDGRRANGGSIVE Trigger: TTCCACAATGCTGCCTCCGTTTGCTCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTTCTCACTGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 90 bp | TATAGGGTGCTACCGAAAGTGTTCCAGCTGAGGGAAAGGAAGGGCTaGGGGAACAGAAAACTTATTCTGCCAGCAACTTTCCTCACTTTC | + |
Preference number: 1 (lower is better) Translates to: YRVLPKVFQLRERKG*GNRKLILPATFLTF Trigger: GAAAGTGAGGAAAGTTGCTGGCAGAATAAGTTTTCTGTTCCCTCAGCCCTTCCTTTCCCTCAGCTGGAACACTTTCGGTAGCACCCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 90 bp | ACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAATaGACAGACGGTAAGGGACAGGTGGGCCCATGTATCCTTGTCCCG | + |
Preference number: 1 (lower is better) Translates to: TERFERTRKGAGLRK*TDGKGQVGPCILVP Trigger: CGGGACAAGGATACATGGGCCCACCTGTCCCTTACCGTCTGTTCATTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 90 bp | AAGATGGGACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTaGGAAAATGAACAGACGGTAAGGGACAGGTGGGCCCATGTATCC | + |
Preference number: 1 (lower is better) Translates to: KMGQKGLKELEKVLA*ENEQTVRDRWAHVS Trigger: GGATACATGGGCCCACCTGTCCCTTACCGTCTGTTCATTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGTCCCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 90 bp | GAGCAAACGGAGGCAGCATTGTGGAAGCCACTGTCTTTTGCCTTTTaGGTTTGGTCCAAGTTTGCTAATGAGTCTTGGTTTCTTTGGAGT | + |
Preference number: 1 (lower is better) Translates to: EQTEAALWKPLSFAF*VWSKFANESWFLWS Trigger: ACTCCAAAGAAACCAAGACTCATTAGCAAACTTGGACCAAACTCAAAAGGCAAAAGACAGTGGCTTCCACAATGCTGCCTCCGTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | GCCCTGGTTGGAGAGGACACGAGTCTCATGAGGACAGAGCTGCCCTaGGCACTTACTGCTGCCCAGCCCCCTGGAGGTAATGAGGTGAAC | + |
Preference number: 2 (lower is better) Translates to: ALVGEDTSLMRTELP*ALTAAQPPGGNEVN Trigger: GTTCACCTCATTACCTCCAGGGGGCTGGGCAGCAGTAAGTGCCAAGGGCAGCTCTGTCCTCATGAGACTCGTGTCCTCTCCAACCAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTAGGACTGGGGAAGGATaGGGCCTGGCTACTGCATGG | + |
Preference number: 2 (lower is better) Translates to: DVTRLGLARSNCLASRLCRTGEG*GLATAW Trigger: CCATGCAGTAGCCAGGCCCCATCCTTCCCCAGTCCT...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTGGGCCCAAAGAGGGATaGCAGGAGGAATCAGGGAGA | + |
Preference number: 2 (lower is better) Translates to: DVTRLGLARSNCLASRLCGPKEG*QEESGR Trigger: TCTCCCTGATTCCTCCTGTCATCCCTCTTTGGGCCC...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | CCAGAAGTCCTCTGGTCTTGGCTTCTTCTTGGCAAATGTTCGCAGCACTGTTTAGCCCTTGGCACTTACTaGTGCCCAGCCCCCTGGAGG | + |
Preference number: 2 (lower is better) Translates to: PEVLWSWLLLGKCSQHCLALGTY*CPAPWR Trigger: CCTCCAGGGGGCTGGGCAGCAGTAAGTGCCAAGGGC...TAAACAGTGCTGCGAACATTTGCCAAGAAGAAGCCAAGACCAGAGGACTTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | TCTGAGCCCTGGGCCCCCAAGAAATACATCTTGATGTGGGTAGCATaGAGGAAGGCAAGGGGGTTGGAGAGGGTCGATCATGTCATGAGG | + |
Preference number: 2 (lower is better) Translates to: SEPWAPKKYILMWVA*RKARGLERVDHVMR Trigger: CCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAATGCTACCCACATCAAGATGTATTTCTTGGGGGCCCAGGGCTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | CCTTCAGGCCCTCCCAAAGCCCACAAAACCAAGGCCGAGAAGGAGAAGGGAGTATCTCAAAGTCCAGAATaGTGGGGGAAGGGAGTTGGA | + |
Preference number: 2 (lower is better) Translates to: PSGPPKAHKTKAEKEKGVSQSPE*WGKGVG Trigger: TCCAACTCCCTTCCCCCATCATTCTGGACTTTGAGA...TACTCCCTTCTCCTTCTCGGCCTTGGTTTTGTGGGCTTTGGGAGGGCCTGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | GCCCAGTTGGTACCCTCTGGCCTTCGGGCCCAAAGAGGGATGACAGGAGGAATCGAAAAGGTGCTGGCTTaGGAAAATGAACAGACGGTA | + |
Preference number: 2 (lower is better) Translates to: AQLVPSGLRAQRGMTGGIEKVLA*ENEQTV Trigger: TACCGTCTGTTCATTTTCTCAAGCCAGCACCTTTTC...GATTCCTCCTGTCATCCCTCTTTGGGCCCGAAGGCCAGAGGGTACCAACTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | TTGAGGAAGGCAAGGGGGTTGGAGAGGGTCGATCATGTCATGAGGACAGGTTGGAAGGCAGATGGCATTTaGCCAGTTGGTACCCTCTGG | + |
Preference number: 2 (lower is better) Translates to: LRKARGLERVDHVMRTGWKADGI*PVGTLW Trigger: CCAGAGGGTACCAACTGGGCAAATGCCATCTGCCTT...CCAACCTGTCCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | TCCATTCTCTCAAATCTCAAAGTCCAGAATGATGGGGGAAGGGAGTaGGAGGAGGAGGGAGAGGAGGAGCAGGAGGAAGAGGAAGAGGAG | + |
Preference number: 2 (lower is better) Translates to: SILSNLKVQNDGGRE*EEEGEEEQEEEEEE Trigger: CTCCTCTTCCTCTTCCTCCTGCTCCTCCTCTCCCTCCTCCTCCAACTCCCTTCCCCCATCATTCTGGACTTTGAGATTTGAGAGAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | CCCAAAGTTAAGGATTCTGAGCCCTGGGCCCCCAAGAAATACATCTaGATGTGGGTAGCATTGAGGAAGGCAAGGGGGTTGGAGAGGGTC | + |
Preference number: 2 (lower is better) Translates to: PKVKDSEPWAPKKYI*MWVALRKARGLERV Trigger: GACCCTCTCCAACCCCCTTGCCTTCCTCAATGCTACCCACATCAAGATGTATTTCTTGGGGGCCCAGGGCTCAGAATCCTTAACTTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGAATGGGGCCTGGCTACTaGATGGAGGCGAGAGACAAG | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRRMGPGY*MEARDK Trigger: CTTGTCTCTCGCCTCCATGCAGTAGCCAGGCCCCAT...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGAGGTGCCAGCCCTGGTTaGAGAGGACACGAGTCTCAT | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRRGASPG*RGHESH Trigger: ATGAGACTCGTGTCCTCTCCAACCAGGGCTGGCACC...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | AGCGTGAACACTACAGTGAGAAGAGGGAAGCATATGGCCCTCGATTaGTCCTTTGGGTCACAGATGGTAGGAGAGCAAACGGAGGCAGCA | + |
Preference number: 2 (lower is better) Translates to: SVNTTVRRGKHMALD*SFGSQMVGEQTEAA Trigger: TGCTGCCTCCGTTTGCTCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTTCTCACTGTAGTGTTCACGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | GTTAAGGATTCTGAGCCCTGGGCCCCCAAGAAATACATCTTGATGTGGGTAGCACGAAAGTGTTCCAGCTaGGGGAAAGGAAGGGCTGAG | + |
Preference number: 2 (lower is better) Translates to: VKDSEPWAPKKYILMWVARKCSS*GKGRAE Trigger: CTCAGCCCTTCCTTTCCCTCAGCTGGAACACTTTCG...TGCTACCCACATCAAGATGTATTTCTTGGGGGCCCAGGGCTCAGAATCCTTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | CCAGAAGTCCTCTGGTCTTGGCTTCTTCTTGGCAAATGTTCGCAGCACTGTTTAGATCCTGCCGTTTGCTaGCCCAGCAGGATGAGGGAT | + |
Preference number: 2 (lower is better) Translates to: PEVLWSWLLLGKCSQHCLDPAVC*PSRMRD Trigger: ATCCCTCATCCTGCTGGGGCAGCAAACGGCAGGATC...TAAACAGTGCTGCGAACATTTGCCAAGAAGAAGCCAAGACCAGAGGACTTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | TTGAGGAAGGCAAGGGGGTTGGAGAGGGTCGATCATGTCATGAGGACAGGTTGGGTGCTGCAATGTACTTaGAACTCTCTCTGCTCCCAT | + |
Preference number: 2 (lower is better) Translates to: LRKARGLERVDHVMRTGWVLQCT*NSLCSH Trigger: ATGGGAGCAGAGAGAGTTGCAAGTACATTGCAGCAC...CCAACCTGTCCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | TGGAAAGACCATAGCCTAAATCAAGACTCTCTTGGCCATAGCCAGACTCTTGCCGGGATAGGAAGCCAGTaGAGGTCTGCCCAGGTTACC | + |
Preference number: 2 (lower is better) Translates to: WKDHSLNQDSLGHSQTLAGIGSQ*RSAQVT Trigger: GGTAACCTGGGCAGACCTCCACTGGCTTCCTATCCC...GGCAAGAGTCTGGCTATGGCCAAGAGAGTCTTGATTTAGGCTATGGTCTTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTAACTTGGGCCCCAAATaGGAACACTTTATCCGTCAC | + |
Preference number: 2 (lower is better) Translates to: DVTRLGLARSNCLASRLCNLGPK*EHFIRH Trigger: GTGACGGATAAAGTGTTCTCATTTGGGGCCCAAGTT...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGACCATGGTCAGGATGTTaGAGGGGACTCATGTCTAAG | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRRPWSGC*RGLMSK Trigger: CTTAGACATGAGTCCCCTTCAACATCCTGACCATGG...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGACTTGCCAGAAGCAATTaGCTAGCCAGCAGACTCTGT | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRRLARSN*LASRLC Trigger: ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAG...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTCCTCACTTTCTTCCTTaGTGCTGCAATGTACTTGCA | + |
Preference number: 2 (lower is better) Translates to: DVTRLGLARSNCLASRLCPHFLP*CCNVLA Trigger: TGCAAGTACATTGCAGCACCAAGGAAGAAAGTGAGG...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | AAGAAATACATCTTGATGTGGGTAGCATTGAGGAAGGCAAGGGGGTaGGAGAGGGTCGATCATGTCATGAGGACAGGTTGGCACAAGGTA | + |
Preference number: 2 (lower is better) Translates to: KKYILMWVALRKARG*ERVDHVMRTGWHKV Trigger: TACCTTGTGCCAACCTGTCCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAATGCTACCCACATCAAGATGTATTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | CAAACACAGTTTGAGTCGAAGCTGCTCCCAGATCCCCACAGGGACTTGTTTGAAATCTGGGTCCCGAAATaGAGAAGCACCAATAGCATC | + |
Preference number: 2 (lower is better) Translates to: QTQFESKLLPDPHRDLFEIWVPK*RSTNSI Trigger: GATGCTATTGGTGCTTCTTCATTTCGGGACCCAGAT...TTCAAACAAGTCCCTGTGGGGATCTGGGAGCAGCTTCGACTCAAACTGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 90 bp | GTAAATGTGACATGTGACTGTCTGAGGAGATGGATAGGTGTGAGTTaGTGCAGCGTGAACACTACAGTGAGAAGAGGGAAGCATATGGCC | + |
Preference number: 2 (lower is better) Translates to: VNVTCDCLRRWIGVS*CSVNTTVRRGKHMA Trigger: GGCCATATGCTTCCCTCTTCTCACTGTAGTGTTCACGCTGCACAAACTCACACCTATCCATCTCCTCAGACAGTCACATGTCACATTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCGCCCTGGAGTACGAATaGTCGGTGGGAGTGGATAAC | + |
Preference number: 2 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTALEYE*SVGVDN Trigger: GTTATCCACTCCCACCGAGCATTCGTACTCCAGGGC...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | AAAGATGGGACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAAATGGTGGGAGCACACTaGGCTCTGGGAGGGCTAGAG | + |
Preference number: 2 (lower is better) Translates to: KDGTERFERTRKGAGLRKMVGAH*ALGGLE Trigger: CTCTAGCCCTCCCAGAGCCCAGTGTGCTCCCACCAT...TTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGTCCCATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGAGAAGTCCTCTGGTCTTaGCTTCTTCTTGGCAAATGT | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRREVLWS*LLLGKC Trigger: ACATTTGCCAAGAAGAAGCCAAGACCAGAGGACTTC...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGACTGTCTTTTGCCTTTTaGGTTTGGTCCAAGTTTGCT | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRRLSFAF*VWSKFA Trigger: AGCAAACTTGGACCAAACTCAAAAGGCAAAAGACAG...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | AATTGGGAAACGGCTGGTTTCTTCCTTCTTTATCATCTTTCCCTAAGCAACCCTGATAATGGGTCTCCCTaGTTCACACATGGTGGGAGC | + |
Preference number: 2 (lower is better) Translates to: NWETAGFFLLYHLSLSNPDNGSP*FTHGGS Trigger: GCTCCCACCATGTGTGAAGCAGGGAGACCCATTATC...AGGGTTGCTTAGGGAAAGATGATAAAGAAGGAAGAAACCAGCCGTTTCCCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGAGAAGCCACTGTCTTTTaGCTTTTGAGTTTGGTCCAA | + |
Preference number: 2 (lower is better) Translates to: KREAYGPRFVLWVTDGRREATVF*LLSLVQ Trigger: TTGGACCAAACTCAAAAGGCAAAAGACAGTGGCTTC...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | CCAGAAGTCCTCTGGTCTTGGCTTCTTCTTGGCAAATGTTCGCAGCACTGTTTATTAGATGCCAGTTATTaGGGGATGCCACAAAATCAC | + |
Preference number: 2 (lower is better) Translates to: PEVLWSWLLLGKCSQHCLLDASY*GMPQNH Trigger: GTGATTTTGTGGCATCCCTCAATAACTGGCATCTAA...TAAACAGTGCTGCGAACATTTGCCAAGAAGAAGCCAAGACCAGAGGACTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | AAGGAGAGGAGTGTCTTGGTAGAAATGCTGAAATTTGTCCAAGAACATAGAGCGGGCCAGTTGCTAACTTaGGCCCCAAATGAGAACACT | + |
Preference number: 2 (lower is better) Translates to: KERSVLVEMLKFVQEHRAGQLLT*APNENT Trigger: AGTGTTCTCATTTGGGGCCCAAGTTAGCAACTGGCC...CGCTCTATGTTCTTGGACAAATTTCAGCATTTCTACCAAGACACTCCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCCCAGTTATTGAGGGATaGCACAAAATCACTGGTGGG | + |
Preference number: 2 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTPVIEG*HKITGG Trigger: CCCACCAGTGATTTTGTGGCATCCCTCAATAACTGG...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | AAGCCAAGTTTGGGAGCAATTAAGTCAAGGTCTGTGACTTTCTGCCTCCCATATTCCAAATTATTTTACTaGATGGCTCGGGAGCATCTG | + |
Preference number: 2 (lower is better) Translates to: KPSLGAIKSRSVTFCLPYSKLFY*MAREHL Trigger: CAGATGCTCCCGAGCCATTCAGTAAAATAATTTGGA...ATATGGGAGGCAGAAAGTCACAGACCTTGACTTAATTGCTCCCAAACTTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR GCA 90 bp | AAGCCAAGTTTGGGAGCAATTAAGTCAAGGTCTGTGACTTTCTGCCTCCCATATAGGATACAGATTAGATaGCAGTTATTGAGGGATGCC | + |
Preference number: 2 (lower is better) Translates to: KPSLGAIKSRSVTFCLPYRIQIR*QLLRDA Trigger: GGCATCCCTCAATAACTGGCATCTAATCTGTATCCT...ATATGGGAGGCAGAAAGTCACAGACCTTGACTTAATTGCTCCCAAACTTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | CAGTTTGAGTCGAAGCTGCTCCCAGATCCCCACAGGGACTTGTTTGAAGAAAAAAAATTGGGAAACGGCTaGTTTCTTCCTTCTTTATCA | + |
Preference number: 2 (lower is better) Translates to: QFESKLLPDPHRDLFEEKKLGNG*FLPSLS Trigger: TGATAAAGAAGGAAGAAACCAGCCGTTTCCCAATTT...TTTTTCTTCAAACAAGTCCCTGTGGGGATCTGGGAGCAGCTTCGACTCAAACTG 43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCTGTTCTTTGTACCTCTaGAGCTGGAGGCAAAACTGT | + |
Preference number: 2 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTCSLYL*SWRQNC Trigger: ACAGTTTTGCCTCCAGCTCCAGAGGTACAAAGAACA...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR TCA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCCCACAGGGACTTGTTTaGAGAAAAATGGTCACTCTT | + |
Preference number: 2 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTPQGLV*RKMVTL Trigger: AAGAGTGACCATTTTTCTTCAAACAAGTCCCTGTGG...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | GAGTTGCAAGGAGAGGAGTGTCTTGGTAGAAATGCTGAAATTTGTCCAAGAACAAAATACATCTTGATGTaGGTAGCATTGAGGAAGGCA | + |
Preference number: 2 (lower is better) Translates to: ELQGEECLGRNAEICPRTKYILM*VALRKA Trigger: TGCCTTCCTCAATGCTACCCACATCAAGATGTATTT...TGTTCTTGGACAAATTTCAGCATTTCTACCAAGACACTCCTCTCCTTGCAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CCA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCTTTGCTAATGAGTCTTaGTTTCTTTGGAGTAATTGG | + |
Preference number: 2 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTFANES*FLWSNW Trigger: CCAATTACTCCAAAGAAACCAAGACTCATTAGCAAA...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | GGCCTGACTAGGCAAAGTGGTGGTGCCAGCCCTGGTTaGAGAGGACACGAGTCTCATGAGGACAGAGCTGCC | + |
Preference number: 3 (lower is better) Translates to: GLTRQSGGASPG*RGHESHEDRAA Trigger: GGCAGCTCTGTCCTCATGAGACTCGTGTCCTCTCCAACCAGGGCTGGCACCACCACTTTGCCTAGTCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 72 bp | AGCACTGAGATCCTGCCGTTTGCTGCCCCAGCAGGATaGGGGATAGGAAGCCAGTGGAGGTCTGCCCAGGTT | + |
Preference number: 3 (lower is better) Translates to: STEILPFAAPAG*GIGSQWRSAQV Trigger: AACCTGGGCAGACCTCCACTGGCTTCCTATCCCTCATCCTGCTGGGGCAGCAAACGGCAGGATCTCAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | CCCAGCAGGATGAGGGATAGGAAGCCAGTGGAGGTCTaGCCAGGTTACCAACAGCTGATGCCCACCCATCCA | + |
Preference number: 3 (lower is better) Translates to: PSRMRDRKPVEV*PGYQQLMPTHP Trigger: TGGATGGGTGGGCATCAGCTGTTGGTAACCTGGGCAGACCTCCACTGGCTTCCTATCCCTCATCCTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | CCTTGTCCCGGGACTCCTGGGCATCTCATGTCACGATaGTCCTTCAGGCCCTCCCAAAGCCCACAAAACCAA | + |
Preference number: 3 (lower is better) Translates to: PCPGTPGHLMSR*SFRPSQSPQNQ Trigger: TTGGTTTTGTGGGCTTTGGGAGGGCCTGAAGGACCATCGTGACATGAGATGCCCAGGAGTCCCGGGACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | CCCAGGACTGGGGAAGGATGGGGCCTGGCTACTGCATaGAGGCGAGAGACAAGGACAGATAACCCTCTTTGT | + |
Preference number: 3 (lower is better) Translates to: PRTGEGWGLATA*RRETRTDNPLC Trigger: ACAAAGAGGGTTATCTGTCCTTGTCTCTCGCCTCCATGCAGTAGCCAGGCCCCATCCTTCCCCAGTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | ACTGGTGGGCCCTCCACACAGAACTCAGGGCAAGGTTaGCAGTCAGCTTCCCCAAGTAAGATGCTTCAGTCC | + |
Preference number: 3 (lower is better) Translates to: TGGPSTQNSGQG*QSASPSKMLQS Trigger: GGACTGAAGCATCTTACTTGGGGAAGCTGACTGGCAACCTTGCCCTGAGTTCTGTGTGGAGGGCCCACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | GTCGATGTCACTAGACTGGGGCTTGCCAGAAGCAATTaGCTAGCCAGCAGACTCTGTTGCCTGGGGTTCAGA | + |
Preference number: 3 (lower is better) Translates to: VDVTRLGLARSN*LASRLCCLGFR Trigger: TCTGAACCCCAGGCAACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | CAAATCTCAAAGTCCAGAATGATGGGGGAAGGGAGTTaGAGGAGGAGGGAGAGGAGGAGCAGGAGGAAGAGG | + |
Preference number: 3 (lower is better) Translates to: QISKSRMMGEGS*RRRERRSRRKR Trigger: CCTCTTCCTCCTGCTCCTCCTCTCCCTCCTCCTCCAACTCCCTTCCCCCATCATTCTGGACTTTGAGATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | CAGGGCAAGGTTGCCAGTCAGCTTCCCCAAGTAAGATaGTTCAGTCCAGGCAGCAGACAAGAAGCACTGAGA | + |
Preference number: 3 (lower is better) Translates to: QGKVASQLPQVR*FSPGSRQEALR Trigger: TCTCAGTGCTTCTTGTCTGCTGCCTGGACTGAAGCATCTTACTTGGGGAAGCTGACTGGCAACCTTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | CTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTTaGCTGGGGTTCAGAGTTGCAAGGAGAGGAGTGTCT | + |
Preference number: 3 (lower is better) Translates to: LARSNCLASRLC*LGFRVARRGVS Trigger: AGACACTCCTCTCCTTGCAACTCTGAACCCCAGGCAACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | GAGAAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTaGGTCACAGATGGTAGGAGAGCAAACGGAGGCAGC | + |
Preference number: 3 (lower is better) Translates to: EKREAYGPRFVL*VTDGRRANGGS Trigger: GCTGCCTCCGTTTGCTCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | CAAACACAGTTTGAGTCGAAGCTGCTCCCAGATCCCCACAGGGACTTGTTTGAACAAGGTGCCGTCCAGTaGGGGAGTAGGCAGATGAAG | + |
Preference number: 3 (lower is better) Translates to: QTQFESKLLPDPHRDLFEQGAVQ*GSRQMK Trigger: CTTCATCTGCCTACTCCCCAACTGGACGGCACCTTG...TTCAAACAAGTCCCTGTGGGGATCTGGGAGCAGCTTCGACTCAAACTGTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 72 bp | GGAAGCCAGTGGAGGTCTGCCCAGGTTACCAACAGCTaGTGCCCACCCATCCATTCTCTCAAATCTCAAAGT | + |
Preference number: 3 (lower is better) Translates to: GSQWRSAQVTNS*CPPIHSLKSQS Trigger: ACTTTGAGATTTGAGAGAATGGATGGGTGGGCATCAGCTGTTGGTAACCTGGGCAGACCTCCACTGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | TCTTCCTTGGTGCTGCAATGTACTTGCAACTCTCTCTaGTCCCATTGGGTCCGGGTCTCATGTGGACCCTTA | + |
Preference number: 3 (lower is better) Translates to: SSLVLQCTCNSL*SHWVRVSCGPL Trigger: TAAGGGTCCACATGAGACCCGGACCCAATGGGAGCAGAGAGAGTTGCAAGTACATTGCAGCACCAAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | AAGTCTACCAGGGCAAAGGGCAAGTTCCCTGCTTGTTaGCCTCCTGCAATAGCTAGAGAAACCAGACACCTC | + |
Preference number: 3 (lower is better) Translates to: KSTRAKGKFPAC*PPAIARETRHL Trigger: GAGGTGTCTGGTTTCTCTAGCTATTGCAGGAGGCCAACAAGCAGGGAACTTGCCCTTTGCCCTGGTAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | CTTTCCTCACTTTCTTCCTTGGTGCTGCAATGTACTTaGAACTCTCTCTGCTCCCATTGGGTCCGGGTCTCA | + |
Preference number: 3 (lower is better) Translates to: LSSLSSLVLQCT*NSLCSHWVRVS Trigger: TGAGACCCGGACCCAATGGGAGCAGAGAGAGTTGCAAGTACATTGCAGCACCAAGGAAGAAAGTGAGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTGATCCCCACAGGGACTaGTTTGAAGAAAAATGGTCA | + |
Preference number: 3 (lower is better) Translates to: DVTRLGLARSNCLASRLCDPHRD*FEEKWS Trigger: TGACCATTTTTCTTCAAACAAGTCCCTGTGGGGATC...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | AAGGAGAGGAGTGTCTTGGTAGAAATGCTGAAATTTGTCCAAGAACATAGAGCGTGGTGCCAGCCCTGGTaGGAGAGGACACGAGTCTCA | + |
Preference number: 3 (lower is better) Translates to: KERSVLVEMLKFVQEHRAWCQPW*ERTRVS Trigger: TGAGACTCGTGTCCTCTCCAACCAGGGCTGGCACCA...CGCTCTATGTTCTTGGACAAATTTCAGCATTTCTACCAAGACACTCCTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | AGAACAACATGCAACATTCTCCCCACATCCTCGATCTaGAATCCCAGAAATAGGAGGCCCATGGTCAGGATG | + |
Preference number: 3 (lower is better) Translates to: RTTCNILPTSSI*NPRNRRPMVRM Trigger: CATCCTGACCATGGGCCTCCTATTTCTGGGATTGCAGATCGAGGATGTGGGGAGAATGTTGCATGTTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | AATGAGGTGAACTGGTCTTTCCTCTTCCGGCGGCCATaGAAAGACCATAGCCTAAATCAAGACTCTCTTGGC | + |
Preference number: 3 (lower is better) Translates to: NEVNWSFLFRRP*KDHSLNQDSLG Trigger: GCCAAGAGAGTCTTGATTTAGGCTATGGTCTTTCCATGGCCGCCGGAAGAGGAAAGACCAGTTCACCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCAGCCAGCAGACTCTGTaGCCTGGGGTTCAGAGTTGC | + |
Preference number: 3 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTSQQTL*PGVQSC Trigger: GCAACTCTGAACCCCAGGCAACAGAGTCTGCTGGCT...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 72 bp | CTACCGAAAGTGTTCCAGCTGAGGGAAAGGAAGGGCTaGGGGAACAGAAAACTTATTCTGCCAGCAACTTTC | + |
Preference number: 3 (lower is better) Translates to: LPKVFQLRERKG*GNRKLILPATF Trigger: GAAAGTTGCTGGCAGAATAAGTTTTCTGTTCCCTCAGCCCTTCCTTTCCCTCAGCTGGAACACTTTCGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | GGCTCTGGGAGGGCTAGAGATAGGATACAGATTAGATaGCAGTTATTGAGGGATGCCACAAAATCACTGGTG | + |
Preference number: 3 (lower is better) Translates to: GSGRARDRIQIR*QLLRDATKSLV Trigger: CACCAGTGATTTTGTGGCATCCCTCAATAACTGGCATCTAATCTGTATCCTATCTCTAGCCCTCCCAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | TGTGACTGTCTGAGGAGATGGATAGGTGTGAGTTTGTaGAGCGTGAACACTACAGTGAGAAGAGGGAAGCAT | + |
Preference number: 3 (lower is better) Translates to: CDCLRRWIGVSL*SVNTTVRRGKH Trigger: ATGCTTCCCTCTTCTCACTGTAGTGTTCACGCTGCACAAACTCACACCTATCCATCTCCTCAGACAGTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | AAAGATGGGACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAAGAACTCAGGGCAAGGTaGCCAGTCAGCTTCCCCAAG | + |
Preference number: 3 (lower is better) Translates to: KDGTERFERTRKGAGLRKELRAR*PVSFPK Trigger: CTTGGGGAAGCTGACTGGCAACCTTGCCCTGAGTTC...TTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGTCCCATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | GAGTCTTGGTTTCTTTGGAGTAATTGGGTGCCGCCAAAAGAGTCGATGTCACTAAGAAGTCCTCTGGTCTaGGCTTCTTCTTGGCAAATG | + |
Preference number: 3 (lower is better) Translates to: ESWFLWSNWVPPKESMSLRSPLV*ASSWQM Trigger: CATTTGCCAAGAAGAAGCCAAGACCAGAGGACTTCT...TAGTGACATCGACTCTTTTGGCGGCACCCAATTACTCCAAAGAAACCAAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 72 bp | CAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTaGGAAAATGAACAGACGGTAAGGGACAGGTGGGCC | + |
Preference number: 3 (lower is better) Translates to: QKGLKELEKVLA*ENEQTVRDRWA Trigger: GGCCCACCTGTCCCTTACCGTCTGTTCATTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | GAGTCTTGGTTTCTTTGGAGTAATTGGGTGCCGCCAAAAGAGTCGATGTCACTACCCACAGGGACTTGTTaGAAGAAAAATGGTCACTCT | + |
Preference number: 3 (lower is better) Translates to: ESWFLWSNWVPPKESMSLPTGTC*KKNGHS Trigger: AGAGTGACCATTTTTCTTCAAACAAGTCCCTGTGGG...TAGTGACATCGACTCTTTTGGCGGCACCCAATTACTCCAAAGAAACCAAGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 72 bp | TTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAATaGACAGACGGTAAGGGACAGGTGGGCCCATGTATC | + |
Preference number: 3 (lower is better) Translates to: FERTRKGAGLRK*TDGKGQVGPCI Trigger: GATACATGGGCCCACCTGTCCCTTACCGTCTGTTCATTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCTCCTCACTTTCTTCCTaGGTGCTGCAATGTACTTGC | + |
Preference number: 3 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTSSLSS*VLQCTC Trigger: GCAAGTACATTGCAGCACCAAGGAAGAAAGTGAGGA...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | CTTCCTTCTTTATCATCTTTCCCTAAGCAACCCTACTaGCAGGGTAGATCAAGGGGTTTTGATCTGGGTAAA | + |
Preference number: 3 (lower is better) Translates to: LPSLSSFPKQPY*QGRSRGFDLGK Trigger: TTTACCCAGATCAAAACCCCTTGATCTACCCTGGCAGTAGGGTTGCTTAGGGAAAGATGATAAAGAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CCA 72 bp | GAGAATGTAAATGTGACATGTGACTGTCTGAGGAGATaGATAGGTGTGAGTTTGTGCAGCGTGAACACTACA | + |
Preference number: 3 (lower is better) Translates to: ENVNVTCDCLRR*IGVSLCSVNTT Trigger: TGTAGTGTTCACGCTGCACAAACTCACACCTATCCATCTCCTCAGACAGTCACATGTCACATTTACATTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | GAAACGGCTGGTTTCTTCCTTCTTTATCATCTTTCCCTAAGCAACCCTACTGCCATTAGATGCCAGTTATaGAGGGATGCCACAAAATCA | + |
Preference number: 3 (lower is better) Translates to: ETAGFFLLYHLSLSNPTAIRCQL*RDATKS Trigger: TGATTTTGTGGCATCCCTCAATAACTGGCATCTAAT...GGCAGTAGGGTTGCTTAGGGAAAGATGATAAAGAAGGAAGAAACCAGCCGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR GCA 72 bp | TCTTTTTCTTTGACTACCTCACCCATCACGCCATATTaGATCCCTTTGCCTAAAATGAAGCCAAGTTTGGGA | + |
Preference number: 3 (lower is better) Translates to: SFSLTTSPITPY*IPLPKMKPSLG Trigger: TCCCAAACTTGGCTTCATTTTAGGCAAAGGGATGCAATATGGCGTGATGGGTGAGGTAGTCAAAGAAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR TCA 72 bp | GTAGTTGATGGGCCAGTTGCTAACTTGGGCCCCAAATaGGAACACTTTATCCGTCACAGTTCAAATAAATTA | + |
Preference number: 3 (lower is better) Translates to: VVDGPVANLGPK*EHFIRHSSNKL Trigger: TAATTTATTTGAACTGTGACGGATAAAGTGTTCTCATTTGGGGCCCAAGTTAGCAACTGGCCCATCAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR-3UTR CAA 90 bp | GAGTTGCAAGGAGAGGAGTGTCTTGGTAGAAATGCTGAAATTTGTCCAAGAACAAAAATGGTCACTCTTTaGTTCTTTGTACCTCTGGAG | + |
Preference number: 3 (lower is better) Translates to: ELQGEECLGRNAEICPRTKMVTL*FFVPLE Trigger: CTCCAGAGGTACAAAGAACAAAAGAGTGACCATTTT...TGTTCTTGGACAAATTTCAGCATTTCTACCAAGACACTCCTCTCCTTGCAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CCA 90 bp | TTGAGGAAGGCAAGGGGGTTGGAGAGGGTCGATCATGTCATGAGGACAGGTTGGCCCTGGCCCTGGTCCTaGCCTTGTCCGTGCCACGGG | + |
Preference number: 4 (lower is better) Translates to: LRKARGLERVDHVMRTGWPWPWS*PCPCHG Trigger: CCCGTGGCACGGACAAGGCCAGGACCAGGGCCAGGG...CCAACCTGTCCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR GCA 90 bp | GCCCAGTTGGTACCCTCTGGCCTTCGGGCCCAAAGAGGGATGACAGGAGGAATCGCACACAGACATGGCTaGAGTCAGGCTGGATGGCCG | + |
Preference number: 4 (lower is better) Translates to: AQLVPSGLRAQRGMTGGIAHRHG*SQAGWP Trigger: CGGCCATCCAGCCTGACTGCAGCCATGTCTGTGTGC...GATTCCTCCTGTCATCCCTCTTTGGGCCCGAAGGCCAGAGGGTACCAACTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR GCA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTCCCGGCGCTGCACACTaGCTCCTCTCCATGGCACAC | + |
Preference number: 4 (lower is better) Translates to: DVTRLGLARSNCLASRLCPGAAH*LLSMAH Trigger: GTGTGCCATGGAGAGGAGGCAGTGTGCAGCGCCGGG...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGACTGCACTCTCCTGGCTaGGGCCCTGGCCCTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: KREAYGPRFVLWVTDGRRLHSPG*GPGPGP Trigger: AGGACCAGGGCCAGGGCCCCAGCCAGGAGAGTGCAG...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CCA 90 bp | CCAGAAGTCCTCTGGTCTTGGCTTCTTCTTGGCAAATGTTCGCAGCACTGTTTATCCGCTGCACTCTCCTaGCTGGGGCCCTGGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: PEVLWSWLLLGKCSQHCLSAALS*LGPWPW Trigger: CCAGGGCCAGGGCCCCAGCCAGGAGAGTGCAGCGGA...TAAACAGTGCTGCGAACATTTGCCAAGAAGAAGCCAAGACCAGAGGACTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | GAACAGACGGTAAGGGACAGGTGGGCCCATGTATCCTaGTCCCGGGACTCCTGGGCATCTCATGTCACGATG | + |
Preference number: 4 (lower is better) Translates to: EQTVRDRWAHVS*SRDSWASHVTM Trigger: CATCGTGACATGAGATGCCCAGGAGTCCCGGGACAAGGATACATGGGCCCACCTGTCCCTTACCGTCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR TCA 90 bp | GATGTCACTAGACTGGGGCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTGGAAGCGCAGGTAGATaGCCAGGGCAGCCATTGTGT | + |
Preference number: 4 (lower is better) Translates to: DVTRLGLARSNCLASRLCGSAGR*PGQPLC Trigger: ACACAATGGCTGCCCTGGTCATCTACCTGCGCTTCC...ACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGCCCCAGTCTAGTGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | GCTTGCCAGAAGCAATTGCCTAGCCAGCAGACTCTGTaGCCTGGGGTTCAGAGTTGCAAGGAGAGGAGTGTC | + |
Preference number: 4 (lower is better) Translates to: ACQKQLPSQQTL*PGVQSCKERSV Trigger: GACACTCCTCTCCTTGCAACTCTGAACCCCAGGCAACAGAGTCTGCTGGCTAGGCAATTGCTTCTGGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | TCAAATCTCAAAGTCCAGAATGATGGGGGAAGGGAGTaGGAGGAGGAGGGAGAGGAGGAGCAGGAGGAAGAG | + |
Preference number: 4 (lower is better) Translates to: SNLKVQNDGGRE*EEEGEEEQEEE Trigger: CTCTTCCTCCTGCTCCTCCTCTCCCTCCTCCTCCAACTCCCTTCCCCCATCATTCTGGACTTTGAGATTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | TTTGATCTGGGTAAAAGGCAGATGGCATTTGCCCAGTaGGTACCCTCTGGCCTTCGGGCCCAAAGAGGGATG | + |
Preference number: 4 (lower is better) Translates to: FDLGKRQMAFAQ*VPSGLRAQRGM Trigger: CATCCCTCTTTGGGCCCGAAGGCCAGAGGGTACCAACTGGGCAAATGCCATCTGCCTTTTACCCAGATCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CCA 90 bp | TTGAGGAAGGCAAGGGGGTTGGAGAGGGTCGATCATGTCATGAGGACAGGTTGGTGGAGCTCACGTCCTTaGCTTCGTTGTTGCAGAGAA | + |
Preference number: 4 (lower is better) Translates to: LRKARGLERVDHVMRTGWWSSRP*LRCCRE Trigger: TTCTCTGCAACAACGAAGCCAAGGACGTGAGCTCCA...CCAACCTGTCCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | ATCTTGATGTGGGTAGCATTGAGGAAGGCAAGGGGGTaGGAGAGGGTCGATCATGTCATGAGGACAGGTTGG | + |
Preference number: 4 (lower is better) Translates to: ILMWVALRKARG*ERVDHVMRTGW Trigger: CCAACCTGTCCTCATGACATGATCGACCCTCTCCAACCCCCTTGCCTTCCTCAATGCTACCCACATCAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | AAGGATTCTGAGCCCTGGGCCCCCAAGAAATACATCTaGATGTGGGTAGCATTGAGGAAGGCAAGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: KDSEPWAPKKYI*MWVALRKARGL Trigger: CAACCCCCTTGCCTTCCTCAATGCTACCCACATCAAGATGTATTTCTTGGGGGCCCAGGGCTCAGAATCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR GCA 90 bp | CAGTTTGAGTCGAAGCTGCTCCCAGATCCCCACAGGGACTTGTTTGAAGAAAAATTACTGCTTCTCCACTaGCCCCTGCTCCGCTGCACT | + |
Preference number: 4 (lower is better) Translates to: QFESKLLPDPHRDLFEEKLLLLH*PLLRCT Trigger: AGTGCAGCGGAGCAGGGGGCAGTGGAGAAGCAGTAA...TTTTTCTTCAAACAAGTCCCTGTGGGGATCTGGGAGCAGCTTCGACTCAAACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR TCA 90 bp | AAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAGAGCCACGGGGTCTCTTTaGACACAAACCAACAGTTTC | + |
Preference number: 4 (lower is better) Translates to: KREAYGPRFVLWVTDGRRATGSL*TQTNSF Trigger: GAAACTGTTGGTTTGTGTTCAAAGAGACCCCGTGGC...TCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | ACTACAGTGAGAAGAGGGAAGCATATGGCCCTCGATTaGTCCTTTGGGTCACAGATGGTAGGAGAGCAAACG | + |
Preference number: 4 (lower is better) Translates to: TTVRRGKHMALD*SFGSQMVGEQT Trigger: CGTTTGCTCTCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTTCTCACTGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR GCA 90 bp | AAAGATGGGACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAACGTCAGTCAAGCCCTTaGCCCAGGCAGCGGCAGCAA | + |
Preference number: 4 (lower is better) Translates to: KDGTERFERTRKGAGLRKRQSSP*PRQRQQ Trigger: TTGCTGCCGCTGCCTGGGGCAAGGGCTTGACTGACG...TTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGTCCCATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | AGGGCTAGAGATAGGATACAGATTAGATGCCAGTTATaGAGGGATGCCACAAAATCACTGGTGGGCCCTCCA | + |
Preference number: 4 (lower is better) Translates to: RARDRIQIRCQL*RDATKSLVGPP Trigger: TGGAGGGCCCACCAGTGATTTTGTGGCATCCCTCAATAACTGGCATCTAATCTGTATCCTATCTCTAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | ACATGTGACTGTCTGAGGAGATGGATAGGTGTGAGTTaGTGCAGCGTGAACACTACAGTGAGAAGAGGGAAG | + |
Preference number: 4 (lower is better) Translates to: TCDCLRRWIGVS*CSVNTTVRRGK Trigger: CTTCCCTCTTCTCACTGTAGTGTTCACGCTGCACAAACTCACACCTATCCATCTCCTCAGACAGTCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR TCA 90 bp | GAGTCTTGGTTTCTTTGGAGTAATTGGGTGCCGCCAAAAGAGTCGATGTCACTACAGAGAAGTCTCCCATaGGGTTCATGGTTTTGGAGG | + |
Preference number: 4 (lower is better) Translates to: ESWFLWSNWVPPKESMSLQRSLP*GSWFWR Trigger: CCTCCAAAACCATGAACCTCATGGGAGACTTCTCTG...TAGTGACATCGACTCTTTTGGCGGCACCCAATTACTCCAAAGAAACCAAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CCA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCACTGCCTCCTCTCCATaGCACACAGACATGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTTASSP*HTDMAA Trigger: TGCAGCCATGTCTGTGTGCCATGGAGAGGAGGCAGT...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR TCA 90 bp | AAGGAGAGGAGTGTCTTGGTAGAAATGCTGAAATTTGTCCAAGAACATAGAGCGTTGGAGGTGGAGTCCTaGTCACAGAGAGGCATCTCA | + |
Preference number: 4 (lower is better) Translates to: KERSVLVEMLKFVQEHRALEVES*SQRGIS Trigger: TGAGATGCCTCTCTGTGATCAGGACTCCACCTCCAA...CGCTCTATGTTCTTGGACAAATTTCAGCATTTCTACCAAGACACTCCTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR GCA 90 bp | AAAGATGGGACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAACCTTGGCTTCGTTGTTaGAGAGAACCAAGGCTCCCG | + |
Preference number: 4 (lower is better) Translates to: KDGTERFERTRKGAGLRKPWLRC*REPRLP Trigger: CGGGAGCCTTGGTTCTCTGCAACAACGAAGCCAAGG...TTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGTCCCATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | AGCAAACGGAGGCAGCATTGTGGAAGCCACTGTCTTTaGCCTTTTGAGTTTGGTCCAAGTTTGCTAATGAGT | + |
Preference number: 4 (lower is better) Translates to: SKRRQHCGSHCL*PFEFGPSLLMS Trigger: ACTCATTAGCAAACTTGGACCAAACTCAAAAGGCAAAAGACAGTGGCTTCCACAATGCTGCCTCCGTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CCA 90 bp | AATTGGGAAACGGCTGGTTTCTTCCTTCTTTATCATCTTTCCCTAAGCAACCCTAGAGGCATCTCATACTaGACCTGGTACAACCTGAAG | + |
Preference number: 4 (lower is better) Translates to: NWETAGFFLLYHLSLSNPRGISY*TWYNLK Trigger: CTTCAGGTTGTACCAGGTCCAGTATGAGATGCCTCT...AGGGTTGCTTAGGGAAAGATGATAAAGAAGGAAGAAACCAGCCGTTTCCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | TTGACTACCTCACCCATCACGCCATATTGCATCCCTTaGCCTAAAATGAAGCCAAGTTTGGGAGCAATTAAG | + |
Preference number: 4 (lower is better) Translates to: LTTSPITPYCIP*PKMKPSLGAIK Trigger: CTTAATTGCTCCCAAACTTGGCTTCATTTTAGGCAAAGGGATGCAATATGGCGTGATGGGTGAGGTAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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3UTR CAA 72 bp | CCATATTGCATCCCTTTGCCTAAAATGAAGCCAAGTTaGGGAGCAATTAAGTCAAGGTCTGTGACTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: PYCIPLPKMKPS*GAIKSRSVTFC Trigger: GCAGAAAGTCACAGACCTTGACTTAATTGCTCCCAAACTTGGCTTCATTTTAGGCAAAGGGATGCAATATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS TCA 90 bp | ACACAGACATGGCTGCAGTCAGGCTGGATGGCCGGGTGGCCCCTTTaGCGTCAGTCAAGCCCTTGCCCCAGGCAGCGGCAGCAACCAGCC | + |
Preference number: 5 (lower is better) Translates to: TQTWLQSGWMAGWPL*RQSSPCPRQRQQPA Trigger: GGCTGGTTGCTGCCGCTGCCTGGGGCAAGGGCTTGACTGACGTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCATGTCTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS GCA 90 bp | CCCGGCGCTGCACACTGCCTCCTCTCCATGGCACACAGACATGGCTaGAGTCAGGCTGGATGGCCGGGTGGCCCCTTTGACGTCAGTCAA | + |
Preference number: 5 (lower is better) Translates to: PGAAHCLLSMAHRHG*SQAGWPGGPFDVSQ Trigger: TTGACTGACGTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCATGTCTGTGTGCCATGGAGAGGAGGCAGTGTGCAGCGCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS CCA 90 bp | TGCCTCCTCTCCATGGCACACAGACATGGCTGCAGTCAGGCTGGATaGCCGGGTGGCCCCTTTGACGTCAGTCAAGCCCTTGCCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: CLLSMAHRHGCSQAG*PGGPFDVSQALAPG Trigger: GCCTGGGGCAAGGGCTTGACTGACGTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCATGTCTGTGTGCCATGGAGAGGAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | AGAAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGATGCTGGCGCGGAGACTaGTCCGAGGTGCGGCCGGGG | + |
Preference number: 5 (lower is better) Translates to: RRGKHMALDLSFGSQMVGCWRGD*SEVRPG Trigger: CCCCGGCCGCACCTCGGACAAGTCTCCGCGCCAGCA...TCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | AGAAGAGGGAAGCATATGGCCCTCGATTTGTCCTTTGGGTCACAGATGGTAGGAACGTCAGTCAAGCCCTaGCCCCAGGCAGCGGCAGCA | + |
Preference number: 5 (lower is better) Translates to: RRGKHMALDLSFGSQMVGTSVKP*PQAAAA Trigger: TGCTGCCGCTGCCTGGGGCAAGGGCTTGACTGACGT...TCCTACCATCTGTGACCCAAAGGACAAATCGAGGGCCATATGCTTCCCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS TCA 90 bp | TCAAGCCCTTGCCCCAGGCAGCGGCAGCAACCAGCCAAAAGAAGGTaGAAGAGACAGTCACACAGAAATCCACCAACGGGAAGCGTTTGT | + |
Preference number: 5 (lower is better) Translates to: SSPCPRQRQQPAKRR*KRQSHRNPPTGSVC Trigger: ACAAACGCTTCCCGTTGGTGGATTTCTGTGTGACTGTCTCTTTCACCTTCTTTTGGCTGGTTGCTGCCGCTGCCTGGGGCAAGGGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | GCTTCCCCAAGTAAGATGCTTCAGTCCAGGCAGCAGACAAGAAGCACTGAGATCACGTCCTTGGCTTCGTaGTTGCAGAGAACCAAGGCT | + |
Preference number: 5 (lower is better) Translates to: ASPSKMLQSRQQTRSTEITSLAS*LQRTKA Trigger: AGCCTTGGTTCTCTGCAACAACGAAGCCAAGGACGT...GATCTCAGTGCTTCTTGTCTGCTGCCTGGACTGAAGCATCTTACTTGGGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | AAAGATGGGACAGAAAGGTTTGAAAGAACTAGAAAAGGTGCTGGCTTGAGAAAAGCCCTGGTCCTGGCCTaGTCCGTGCCACGGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: KDGTERFERTRKGAGLRKALVLA*SVPRGL Trigger: GAGACCCCGTGGCACGGACAAGGCCAGGACCAGGGC...TTTTCTCAAGCCAGCACCTTTTCTAGTTCTTTCAAACCTTTCTGTCCCATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS TCA 90 bp | GCAGAGAAGTCTCCCATGAGGTTCATGGTTTTGGAGGTGGAGTCCTaGTCACAGAGAGGCATCTCATACTGGACCTGGTACAACCTGAAG | + |
Preference number: 5 (lower is better) Translates to: AEKSPMRFMVLEVES*SQRGISYWTWYNLK Trigger: CTTCAGGTTGTACCAGGTCCAGTATGAGATGCCTCTCTGTGATCAGGACTCCACCTCCAAAACCATGAACCTCATGGGAGACTTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | CAGTTTGAGTCGAAGCTGCTCCCAGATCCCCACAGGGACTTGTTTGAAGAAAAAATGGAGCTCACGTCCTaGGCTTCGTTGTTGCAGAGA | + |
Preference number: 5 (lower is better) Translates to: QFESKLLPDPHRDLFEEKMELTS*ASLLQR Trigger: TCTCTGCAACAACGAAGCCAAGGACGTGAGCTCCAT...TTTTTCTTCAAACAAGTCCCTGTGGGGATCTGGGAGCAGCTTCGACTCAAACTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | TCCAGAAAGTACCTTAATCACCCACCTTCTCAGCTGATAATATTTCTTCCCACCTCCTTGGCTTCGTTGTaGCAGAGAACCAAGGCTCCC | + |
Preference number: 5 (lower is better) Translates to: SRKYLNHPPSQLIIFLPTSLASL*QRTKAP Trigger: GGGAGCCTTGGTTCTCTGCAACAACGAAGCCAAGGA...GGTGGGAAGAAATATTATCAGCTGAGAAGGTGGGTGATTAAGGTACTTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS-3UTR CAA 90 bp | AATTGGGAAACGGCTGGTTTCTTCCTTCTTTATCATCTTTCCCTAAGCAACCCTTGCCACGGGGTCTCTTaGAACACAAACCAACAGTTT | + |
Preference number: 5 (lower is better) Translates to: NWETAGFFLLYHLSLSNPCHGVS*NTNQQF Trigger: AAACTGTTGGTTTGTGTTCAAAGAGACCCCGTGGCA...AGGGTTGCTTAGGGAAAGATGATAAAGAAGGAAGAAACCAGCCGTTTCCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS CAA 72 bp | CCCAGGAGCAGGCGGTCCACCTGCTGGCGCGGAGACTaGTCCGAGGTGCGGCCGGGGCTCTCCGTCGAGGAC | + |
Preference number: 6 (lower is better) Translates to: PRSRRSTCWRGD*SEVRPGLSVED Trigger: GTCCTCGACGGAGAGCCCCGGCCGCACCTCGGACAAGTCTCCGCGCCAGCAGGTGGACCGCCTGCTCCTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS TCA 72 bp | TGGCTGCAGTCAGGCTGGATGGCCGGGTGGCCCCTTTaGCGTCAGTCAAGCCCTTGCCCCAGGCAGCGGCAG | + |
Preference number: 6 (lower is better) Translates to: WLQSGWMAGWPL*RQSSPCPRQRQ Trigger: CTGCCGCTGCCTGGGGCAAGGGCTTGACTGACGTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS CAA 72 bp | ATGGCTGCAGTCAGGCTGGATGGCCGGGTGGCCCCTTaGACGTCAGTCAAGCCCTTGCCCCAGGCAGCGGCA | + |
Preference number: 6 (lower is better) Translates to: MAAVRLDGRVAP*TSVKPLPQAAA Trigger: TGCCGCTGCCTGGGGCAAGGGCTTGACTGACGTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS CAA 90 bp | CACACAGACATGGCTGCAGTCAGGCTGGATGGCCGGGTGGCCCCTTaGACGTCAGTCAAGCCCTTGCCCCAGGCAGCGGCAGCAACCAGC | + |
Preference number: 6 (lower is better) Translates to: HTDMAAVRLDGRVAP*TSVKPLPQAAAATS Trigger: GCTGGTTGCTGCCGCTGCCTGGGGCAAGGGCTTGACTGACGTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCATGTCTGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS GCA 72 bp | GCACACTGCCTCCTCTCCATGGCACACAGACATGGCTaGAGTCAGGCTGGATGGCCGGGTGGCCCCTTTGAC | + |
Preference number: 6 (lower is better) Translates to: AHCLLSMAHRHG*SQAGWPGGPFD Trigger: GTCAAAGGGGCCACCCGGCCATCCAGCCTGACTGCAGCCATGTCTGTGTGCCATGGAGAGGAGGCAGTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS TCA 72 bp | CCTGGTCCTGGCCTTGTCCGTGCCACGGGGTCTCTTTaGACACAAACCAACAGTTTCCAGCCCACAGGAAGA | + |
Preference number: 6 (lower is better) Translates to: PGPGLVRATGSL*TQTNSFQPTGR Trigger: TCTTCCTGTGGGCTGGAAACTGTTGGTTTGTGTTCAAAGAGACCCCGTGGCACGGACAAGGCCAGGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS CAA 72 bp | AACAAAACAATGATGGAGCTCACGTCCTTGGCTTCGTaGTTGCAGAGAACCAAGGCTCCCGTCTCCCCGCTG | + |
Preference number: 6 (lower is better) Translates to: NKTMMELTSLAS*LQRTKAPVSPL Trigger: CAGCGGGGAGACGGGAGCCTTGGTTCTCTGCAACAACGAAGCCAAGGACGTGAGCTCCATCATTGTTTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |
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CDS TCA 72 bp | TCTCCCATGAGGTTCATGGTTTTGGAGGTGGAGTCCTaGTCACAGAGAGGCATCTCATACTGGACCTGGTAC | + |
Preference number: 6 (lower is better) Translates to: SPMRFMVLEVES*SQRGISYWTWY Trigger: GTACCAGGTCCAGTATGAGATGCCTCTCTGTGATCAGGACTCCACCTCCAAAACCATGAACCTCATGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141387.4 |