Pregenerated sensors for SYP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031144Ensembl transcript IDs: ENSMUST00000069520.11, ENSMUST00000128890.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTCCAAACCACAATACTTGGCTCTTCCCAGGTTATGTCCGTTCTaGGGCGTGGGGTGGAATCAGGAGTACTCCTTCCTACTTTTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: PSKPQYLALPRLCPF*GVGWNQEYSFLLLA Trigger: TGCTAAAAGTAGGAAGGAGTACTCCTGATTCCACCCCACGCCCCAGAACGGACATAACCTGGGAAGAGCCAAGTATTGTGGTTTGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR GCA 90 bp | ACCCACTGCTCAAACTCCACTCAACTGAAACCGTATTTTCTTTTCTaGCCCATTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACAT | + |
|
Preference number: 1 (lower is better) Translates to: THCSNSTQLKPYFLF*PITEWASSSESTTH Trigger: ATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAATGGGGCAGAAAAGAAAATACGGTTTCAGTTGAGTGGAGTTTGAGCAGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGCTCGTCCTCTTCACCTaGCTGTCTGCAATCCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: GSRIGAPEPASQCSGTDGLVLFT*LSAILT Trigger: GGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG...CCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGTTCTGGGGCGTGGGGTaGAATCAGGAGTACTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSRIGAPEPASQCSGTDGFWGVG*NQEYSF Trigger: GAAGGAGTACTCCTGATTCCACCCCACGCCCCAGAA...CCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGAGTGATGGGCTTCCTCTTCTaGGAGCACCACACATCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PGLGLQSQPPSAPGQTGVMGFLF*EHHTSL Trigger: GAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCAT...CACTCCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGAATTCAACTTTTGGCTaGCTGGTCCTCTCTCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: GSRIGAPEPASQCSGTDGNSTFG*LVLSLQ Trigger: CTGTAGAGAGAGGACCAGTCAGCCAAAAGTTGAATT...CCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR TCA 90 bp | GACAAAATGGCAACACACGATCACAGGCACTACCAACGTCACAGACACAGCAGAGGAACCGATAGGGGCTaGGGAGTGCAAGGTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DKMATHDHRHYQRHRHSRGTDRG*GVQGQG Trigger: CCCCTGACCTTGCACTCCTCAGCCCCTATCGGTTCC...TCTGCTGTGTCTGTGACGTTGGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGAGTGCAAACTCCACTCAACTaGAACCGTATTTTCTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PGLGLQSQPPSAPGQTGVQTPLN*NRIFFS Trigger: AGAAAAGAAAATACGGTTTCAGTTGAGTGGAGTTTG...CACTCCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR GCA 90 bp | TCTGCCCCATTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACATCCCTCGTATAGGGGCTGAGGAGTaGAAGGTCAGGGGTAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SAPLQNGLPLLRAPHIPRIGAEE*KVRGRE Trigger: CTCCCTACCCCTGACCTTGCACTCCTCAGCCCCTAT...ACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAATGGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR GCA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTGATCCAACCCAAACCTaGCCACTCCGGAACCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LVLFTCLSAILTRTFSQADPTQT*PLRNPP Trigger: TGGTGGGTTCCGGAGTGGGCAGGTTTGGGTTGGATC...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTGGAATCAAGCTCAAACTCCATGCAGCCAAGGTCTaGCCCCCTTCCTGTCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SRIPLLALLKLFGIKLKLHAAKV*PPSCPL Trigger: AAGGGGACAGGAAGGGGGCCAGACCTTGGCTGCATG...GAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACATCCCTCGTCCTCTTCACTCAAGCTCAAACTCCTaGATGTTCCAAGACACACCC | + |
|
Preference number: 2 (lower is better) Translates to: LQNGLPLLRAPHIPRPLHSSSNS*MFQDTP Trigger: GGGTGTGTCTTGGAACATTCAGGAGTTTGAGCTTGA...GTGAAGAGGACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAATGGCAACACACGATCACAGGCACTACCAACGTCACAGACACAGCAGACCAAACCACAATACTTaGCTCTTCCCAGGTTATGTC | + |
|
Preference number: 2 (lower is better) Translates to: DKMATHDHRHYQRHRHSRPNHNT*LFPGYV Trigger: GACATAACCTGGGAAGAGCCAAGTATTGTGGTTTGG...TCTGCTGTGTCTGTGACGTTGGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGGAATCAGGAGTACTCCTTCCTACTTTTAGCAAAACTCACCTCACAGCTCGGGGCAGGCCTTCTCTaGAGCTCTTGCCCACCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: GWNQEYSFLLLAKLTSQLGAGLL*SSCPPV Trigger: CACGGGTGGGCAAGAGCTCAAGAGAAGGCCTGCCCC...GAGCTGTGAGGTGAGTTTTGCTAAAAGTAGGAAGGAGTACTCCTGATTCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR CCA 72 bp | AAGGGACATTTCGCTCACCCTCCAAACCACAATACTTaGCTCTTCCCAGGTTATGTCCGTTCTGGGGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KGHFAHPPNHNT*LFPGYVRSGAW Trigger: CCACGCCCCAGAACGGACATAACCTGGGAAGAGCCAAGTATTGTGGTTTGGAGGGTGAGCGAAATGTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR TCA 72 bp | CATCCCTCGTCCTCTTCACCTGCCTGTCTGCAATCCTaGCCAGAACCTTCTCTCAAGCTTAGATCATTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: HPSSSSPACLQS*PEPSLKLRSFP Trigger: CGGGAATGATCTAAGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR TCA 72 bp | TCTTTTCTGCCCCATTACAGAATGGGCTTCCTCTTCTaGGAGCACCACACATCCCTCGTCCTCTTCACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SFLPHYRMGFLF*EHHTSLVLFTC Trigger: GCAGGTGAAGAGGACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAATGGGGCAGAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTCCTTGCTCAAGCTCTTaGGAATCAAGCTCAAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVLFTCLSAILTRTFSQAPCSSS*ESSSNS Trigger: GGAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGG...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACATCCCTCGTCCTCTTCACTCCACCCCTCTACTCTaGGGGTTGAATTTCCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQNGLPLLRAPHIPRPLHSTPLL*GLNFHL Trigger: CAAATGGAAATTCAACCCCAAGAGTAGAGGGGTGGA...GTGAAGAGGACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR TCA 72 bp | CTCCACATCCAGTATGTGTGGAATTCAACTTTTGGCTaGCTGGTCCTCTCTCTACAGAGGCCATCTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHIQYVWNSTFG*LVLSLQRPSPL Trigger: GAGAGGAGATGGCCTCTGTAGAGAGAGGACCAGTCAGCCAAAAGTTGAATTCCACACATACTGGATGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR GCA 72 bp | ACCTCACAGCTCCCAACCATGGCCTCCTACACCCACTaGTCAAACTCCACTCAACTGAAACCGTATTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TSQLPTMASYTH*SNSTQLKPYFL Trigger: AAGAAAATACGGTTTCAGTTGAGTGGAGTTTGAGCAGTGGGTGTAGGAGGCCATGGTTGGGAGCTGTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAATGGCAACACACGATCACAGGCACTACCAACGTCACAGACACAGCAGAATCCCACTTCTAGCCTaGCTCAAGCTCTTTGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: DKMATHDHRHYQRHRHSRIPLLA*LKLFGI Trigger: GATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGAT...TCTGCTGTGTCTGTGACGTTGGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGGAATCAGGAGTACTCCTTCCTACTTTTAGCAAAACTCACCTCACAGCTCCCTCTACTCTTGGGGTaGAATTTCCATTTGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GWNQEYSFLLLAKLTSQLPLLLG*NFHLRA Trigger: AGCTCTCAAATGGAAATTCAACCCCAAGAGTAGAGG...GAGCTGTGAGGTGAGTTTTGCTAAAAGTAGGAAGGAGTACTCCTGATTCCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR TCA 72 bp | CCTTGCTCAAGCTCTTTGGAATCAAGCTCAAACTCCTaGATGTTCCAAGACACACCCCTTCTAGAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCSSSLESSSNS*MFQDTPLLEML Trigger: CAGCATCTCTAGAAGGGGTGTGTCTTGGAACATTCAGGAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR CCA 72 bp | TTCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTaGAATCAAGCTCAAACTCCTGAATGTTCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: FPNPTSSLAQAL*NQAQTPECSKT Trigger: TGTCTTGGAACATTCAGGAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR GCA 72 bp | TCAAACTCCACTCAACTGAAACCGTATTTTCTTTTCTaGCCCATTACAGAATGGGCTTCCTCTTCTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNSTQLKPYFLF*PITEWASSSES Trigger: GCTCTCAGAAGAGGAAGCCCATTCTGTAATGGGGCAGAAAAGAAAATACGGTTTCAGTTGAGTGGAGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGACACGAACCATAGGTTaGCAACCCAGAGCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRIGAPEPASQCSGTDGTRTIG*QPRAPG Trigger: ACCTGGTGCTCTGGGTTGGCAACCTATGGTTCGTGT...CCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | GGGCTGAGGAGTGCAAGGTCAGGGGTAGGGAGGAGCCCATTCAGGACTGGGCCCTGGCCAGGGCCCCCATaGAGTAGAGGAAGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLRSARSGVGRSPFRTGPWPGPP*SRGRQT Trigger: TGTTTGCCTTCCTCTACTCCATGGGGGCCCTGGCCA...GGGCCCAGTCCTGAATGGGCTCCTCCCTACCCCTGACCTTGCACTCCTCAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR TCA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTCTGGAGGTGCGCGCATaGATGGGGCGGCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLFTCLSAILTRTFSQALEVRA*MGRPSL Trigger: CAGGCTGGGCCGCCCCATTCATGCGCGCACCTCCAG...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCATTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACATCCCTCGTTGGGGCGCCTGGAGGTaGGCGCATGAATGGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPLQNGLPLLRAPHIPRWGAWR*AHEWGG Trigger: GCCGCCCCATTCATGCGCGCACCTCCAGGCGCCCCA...ACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAATGGGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGGCATCAAAGTACACTTaGTGCAGCCTGAATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRIGAPEPASQCSGTDGASKYT*CSLNGY Trigger: GTACCCATTCAGGCTGCACCAAGTGTACTTTGATGC...CCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGCAGGAAGTCCATCATTaGCCCTTTGTTGTTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRIGAPEPASQCSGTDGQEVHH*PFVVLS Trigger: CGAGAGAACAACAAAGGGCCAATGATGGACTTCCTG...CCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | GGGCTGAGGAGTGCAAGGTCAGGGGTAGGGAGGAGCCCATTCAGGACTGGGCCCTGTTCTCTGGGTCAGTaGCCATCTTCACATCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLRSARSGVGRSPFRTGPCSLGQ*PSSHRT Trigger: TGTCCGATGTGAAGATGGCCACTGACCCAGAGAACA...GGGCCCAGTCCTGAATGGGCTCCTCCCTACCCCTGACCTTGCACTCCTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTAGGTGCGCGCATGAATaGGGCGGCCCAGCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLFTCLSAILTRTFSQARCAHE*GGPACL Trigger: GAGACAGGCTGGGCCGCCCCATTCATGCGCGCACCT...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCATTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACATCCCTCGTGCAGGAAGATGTAGGTaGCCAGGGCCCCCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAPLQNGLPLLRAPHIPRAGRCR*PGPPWS Trigger: ACTCCATGGGGGCCCTGGCCACCTACATCTTCCTGC...ACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAATGGGGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTGATTGGAGAAGGAGGTaGGCGCACCCTGTTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLFTCLSAILTRTFSQADWRRR*AHPVGR Trigger: ACGGCCAACAGGGTGCGCCCACCTCCTTCTCCAATC...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | GGAATTCAACTTTTGGCTGACTGGTCCTCTCTCTACAGAGGCCATCTCCTCTCCTCGCCAGGAGCTGGTTaGTTTTCTGGGGCGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLADWSSLYRGHLLSSPGAG*FSGAPG Trigger: TCCAGGCGCCCCAGAAAAGCAACCAGCTCCTGGCGA...GGAGAGGAGATGGCCTCTGTAGAGAGAGGACCAGTCAGCCAAAAGTTGAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR TCA 90 bp | GGAATTCAACTTTTGGCTGACTGGTCCTCTCTCTACAGAGGCCATCTCCTCTCCCGAGGTGTTGAGTCCTaGAGTCACAGGGTCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIQLLADWSSLYRGHLLSRGVES*SHRVPQ Trigger: CTGAGGGACCCTGTGACTTCAGGACTCAACACCTCG...GGAGAGGAGATGGCCTCTGTAGAGAGAGGACCAGTCAGCCAAAAGTTGAATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | GACTGGTCCTCTCTCTACAGAGGCCATCTCCTCTCCACCCATTTCATCCAAGCCGGTCCCTCAGTTCCTTaGATGTGTTTCCTGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DWSSLYRGHLLSTHFIQAGPSVP*MCFLSG Trigger: GCCAGACAGGAAACACATGCAAGGAACTGAGGGACC...GGCTTGGATGAAATGGGTGGAGAGGAGATGGCCTCTGTAGAGAGAGGACCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | GACTGGTCCTCTCTCTACAGAGGCCATCTCCTCTCCACCCATTTCATCCAAGCCAAGCGAACACTGCTGTaGCCAGGAAGTCCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DWSSLYRGHLLSTHFIQAKRTLL*PGSPSL Trigger: CAATGATGGACTTCCTGGCCACAGCAGTGTTCGCTT...GGCTTGGATGAAATGGGTGGAGAGGAGATGGCCTCTGTAGAGAGAGGACCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR TCA 90 bp | CTCTCAAGCTTAGATCATTCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTCCCCCAGCCACCAGCTaGTTCACCACGTCCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSLDHSRIPLLALLKLFPPATS*FTTSMS Trigger: AGACATGGACGTGGTGAATCAGCTGGTGGCTGGGGG...AAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGAATGATCTAAGCTTGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR TCA 90 bp | TCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTGGAATCAAGCTCAAACTCCCCAGCCTGTCTCCTTaGACACGAACCATAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRIPLLALLKLFGIKLKLPSLSP*TRTIGC Trigger: GCAACCTATGGTTCGTGTTCAAGGAGACAGGCTGGG...GAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | GACAAAATGGCAACACACGATCACAGGCACTACCAACGTCACAGACACAGCAGAATGGCAAAGACCCACTaGAGCACCTTCACGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKMATHDHRHYQRHRHSRMAKTH*STFTKP Trigger: TGGCTTCGTGAAGGTGCTGCAGTGGGTCTTTGCCAT...TCTGCTGTGTCTGTGACGTTGGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR CAA 72 bp | TTAGGCTCCACATCCAGTATGTGTGGAATTCAACTTTaGGCTGACTGGTCCTCTCTCTACAGAGGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSTSSMCGIQL*ADWSSLYRGHL Trigger: GAGATGGCCTCTGTAGAGAGAGGACCAGTCAGCCAAAAGTTGAATTCCACACATACTGGATGTGGAGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | GGGTGGAATCAGGAGTACTCCTTCCTACTTTTAGCAAAACTCACCTCACAGCTCTCAAAGTACACTTGGTaGAGCCTGAATGGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWNQEYSFLLLAKLTSQLSKYTW*SLNGYS Trigger: TGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGA...GAGCTGTGAGGTGAGTTTTGCTAAAAGTAGGAAGGAGTACTCCTGATTCCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR GCA 90 bp | TCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTGGAATCAAGCTCAAACTCTTTAACGCAGGAGGGTaGATCAAAGTACACTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRIPLLALLKLFGIKLKLFNAGG*IKVHLV Trigger: CACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAA...GAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCAAGCTTAGATCATTCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTTTGGTGCAGCCTGAATaGGTACTCAAATTCGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLDHSRIPLLALLKLFLVQPE*VLKFDF Trigger: GAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAA...AAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGAATGATCTAAGCTTGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| 3UTR CAA 72 bp | TCAAGCTTAGATCATTCCCGAATCCCACTTCTAGCCTaGCTCAAGCTCTTTGGAATCAAGCTCAAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLDHSRIPLLA*LKLFGIKLKLL Trigger: CAGGAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGAATGATCTAAGCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 90 bp | GCTGCCCATAGTCGCCCTGAGGCCCGTAGCCACCGCCACCGCCGCTaGCTGGCTGCCCGTAATCGGGTTGATAACCACCCTGAGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AAHSRPEARSHRHRR*LAARNRVDNHPEAR Trigger: ACGGGCCTCAGGGTGGTTATCAACCCGATTACGGGCAGCCAGCCAGCGGCGGTGGCGGTGGCTACGGGCCTCAGGGCGACTATGGGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 90 bp | ATAGCCCGCATCGCCGTAGGCATCGCCAGGAGCTGGTTGCTTTTCTaGGGCGCCTGGAGGTGCGCGCATGAATGGGGCGGCCCAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IARIAVGIARSWLLF*GAWRCAHEWGGPAC Trigger: ACAGGCTGGGCCGCCCCATTCATGCGCGCACCTCCAGGCGCCCCAGAAAAGCAACCAGCTCCTGGCGATGCCTACGGCGATGCGGGCTAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | CCAGGATTGGGGCTCCAGAGCCAGCCTCCCAGTGCTCCGGGACAGACGGGAGTGTCCATCATTGGCCCTTaGTTGTTCTCTCGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLGLQSQPPSAPGQTGVSIIGP*LFSRYL Trigger: CAAGTACCGAGAGAACAACAAAGGGCCAATGATGGA...CACTCCCGTCTGTCCCGGAGCACTGGGAGGCTGGCTCTGGAGCCCCAATCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | TTACAGAATGGGCTTCCTCTTCTGAGAGCACCACACATCCCTCGTCCTCTTCACGGTGGGCGCACCCTGTaGGCCGTAGCCTTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQNGLPLLRAPHIPRPLHGGRTL*AVALLP Trigger: GGGCAGCAAGGCTACGGCCAACAGGGTGCGCCCACC...GTGAAGAGGACGAGGGATGTGTGGTGCTCTCAGAAGAGGAAGCCCATTCTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | GACTGGTCCTCTCTCTACAGAGGCCATCTCCTCTCCACCCATTTCATCCAAGCCCTGTTGGCCGTAGCCTaGCTGCCCATAGTCGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DWSSLYRGHLLSTHFIQALLAVA*LPIVAL Trigger: CAGGGCGACTATGGGCAGCAAGGCTACGGCCAACAG...GGCTTGGATGAAATGGGTGGAGAGGAGATGGCCTCTGTAGAGAGAGGACCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 90 bp | GTTTCCTGTCTGGCGGCACATAGGCATCTCCTTGATAATGTTCTCTaGGTCAGTGGCCATCTTCACATCGGACAGGCCTTTGGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSCLAAHRHLLDNVL*VSGHLHIGQAFGPG Trigger: GCCTGGGCCAAAGGCCTGTCCGATGTGAAGATGGCCACTGACCCAGAGAACATTATCAAGGAGATGCCTATGTGCCGCCAGACAGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTAACACCACCGAGGTGTaGAGTCCTGAAGTCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLFTCLSAILTRTFSQANTTEV*SPEVTG Trigger: CCCTGTGACTTCAGGACTCAACACCTCGGTGGTGTT...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | CTCGTCCTCTTCACCTGCCTGTCTGCAATCCTGACCAGAACCTTCTCTCAAGCTAACACGAACCATAGGTaGCCAACCCAGAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLFTCLSAILTRTFSQANTNHR*PTQSTR Trigger: CCTGGTGCTCTGGGTTGGCAACCTATGGTTCGTGTT...AGCTTGAGAGAAGGTTCTGGTCAGGATTGCAGACAGGCAGGTGAAGAGGACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | TCCCGAATCCCACTTCTAGCCTTGCTCAAGCTCTTTGGAATCAAGCTCAAACTCGCACTCTCCGTCTTGTaGGCACACTCCACGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRIPLLALLKLFGIKLKLALSVL*AHSTLS Trigger: GCTGAGCGTGGAGTGTGCCAACAAGACGGAGAGTGC...GAGTTTGAGCTTGATTCCAAAGAGCTTGAGCAAGGCTAGAAGTGGGATTCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTACAGAGGCCATCTCCTCTCCACCCATTTCATCCAAGCCACCTCCACCCAGGAAGTCCATCATaGGCCCTTTGTTGTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQRPSPLHPFHPSHLHPGSPS*ALCCSL Trigger: GAGAGAACAACAAAGGGCCAATGATGGACTTCCTGG...GTGGAGGTGGCTTGGATGAAATGGGTGGAGAGGAGATGGCCTCTGTAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 90 bp | CCTGAAGTCACAGGGTCCCTCAGTTCCTTGCATGTGTTTCCTGTCTaGCGGCACATAGGCATCTCCTTGATAATGTTCTCTGGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PEVTGSLSSLHVFPV*RHIGISLIMFSGSV Trigger: CACTGACCCAGAGAACATTATCAAGGAGATGCCTATGTGCCGCCAGACAGGAAACACATGCAAGGAACTGAGGGACCCTGTGACTTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS GCA 90 bp | GTAGTGCCCCCTTTAACGCAGGAGGGTGCATCAAAGTACACTTGGTaGAGCCTGAATGGGTACTCAAATTCGACTTCGATGTTGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VVPPLTQEGASKYTW*SLNGYSNSTSMLRA Trigger: TGCCCTCAACATCGAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGGGGGCACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAATCAGGAGTACTCCTTCCTACTTTTAGCAAAACTCACCTCACAGCTCGGGTCCCTCAGTTCCTaGCATGTGTTTCCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWNQEYSFLLLAKLTSQLGSLSS*HVFPVW Trigger: CCAGACAGGAAACACATGCAAGGAACTGAGGGACCC...GAGCTGTGAGGTGAGTTTTGCTAAAAGTAGGAAGGAGTACTCCTGATTCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 90 bp | TTGGTAGTGCCCCCTTTAACGCAGGAGGGTGCATCAAAGTACACTTaGTGCAGCCTGAATGGGTACTCAAATTCGACTTCGATGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVVPPLTQEGASKYT*CSLNGYSNSTSMLR Trigger: CCTCAACATCGAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGGGGGCACTACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAATCAGGAGTACTCCTTCCTACTTTTAGCAAAACTCACCTCACAGCTCTGCATCAAAGTACACTaGGTGCAGCCTGAATGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GWNQEYSFLLLAKLTSQLCIKVH*VQPEWV Trigger: TACCCATTCAGGCTGCACCAAGTGTACTTTGATGCA...GAGCTGTGAGGTGAGTTTTGCTAAAAGTAGGAAGGAGTACTCCTGATTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 90 bp | CCCGTAGCCACCGCCACCGCCGCTGGCTGGCTGCCCGTAATCGGGTaGATAACCACCCTGAGGCCCGTAGGAGTCCTGGGGCCCATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVATATAAGWLPVIG*ITTLRPVGVLGPIA Trigger: GGCTATGGGCCCCAGGACTCCTACGGGCCTCAGGGTGGTTATCAACCCGATTACGGGCAGCCAGCCAGCGGCGGTGGCGGTGGCTACGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS GCA 72 bp | CCACCCGGAACTGACCCCCAGCCACCAGCGTATCTCTaGTCCCCTCGCCACCACCTCTCAGGGTTCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGTDPQPPAYL*SPRHHLSGFEG Trigger: GCCCTCGAACCCTGAGAGGTGGTGGCGAGGGGAGCAGAGATACGCTGGTGGCTGGGGGTCAGTTCCGGGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128890.2 |
||
| CDS CCA 72 bp | AGTCGCCCTGAGGCCCGTAGCCACCGCCACCGCCGCTaGCTGGCTGCCCGTAATCGGGTTGATAACCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRPEARSHRHRR*LAARNRVDNHP Trigger: AGGGTGGTTATCAACCCGATTACGGGCAGCCAGCCAGCGGCGGTGGCGGTGGCTACGGGCCTCAGGGCGACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 72 bp | ACCGCCACCGCCGCTGGCTGGCTGCCCGTAATCGGGTaGATAACCACCCTGAGGCCCGTAGGAGTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TATAAGWLPVIG*ITTLRPVGVLG Trigger: CCCCAGGACTCCTACGGGCCTCAGGGTGGTTATCAACCCGATTACGGGCAGCCAGCCAGCGGCGGTGGCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 72 bp | GGAGAAGGAGGTGGGCGCACCCTGTTGGCCGTAGCCTaGCTGCCCATAGTCGCCCTGAGGCCCGTAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GEGGGRTLLAVA*LPIVALRPVAT Trigger: GGTGGCTACGGGCCTCAGGGCGACTATGGGCAGCAAGGCTACGGCCAACAGGGTGCGCCCACCTCCTTCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 90 bp | CATCTGATTGGAGAAGGAGGTGGGCGCACCCTGTTGGCCGTAGCCTaGCTGCCCATAGTCGCCCTGAGGCCCGTAGCCACCGCCACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLIGEGGGRTLLAVA*LPIVALRPVATATA Trigger: GGCGGTGGCGGTGGCTACGGGCCTCAGGGCGACTATGGGCAGCAAGGCTACGGCCAACAGGGTGCGCCCACCTCCTTCTCCAATCAGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 72 bp | ATCGCCGTAGGCATCGCCAGGAGCTGGTTGCTTTTCTaGGGCGCCTGGAGGTGCGCGCATGAATGGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: IAVGIARSWLLF*GAWRCAHEWGG Trigger: GCCGCCCCATTCATGCGCGCACCTCCAGGCGCCCCAGAAAAGCAACCAGCTCCTGGCGATGCCTACGGCGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 72 bp | CCCATAGCCCGCATCGCCGTAGGCATCGCCAGGAGCTaGTTGCTTTTCTGGGGCGCCTGGAGGTGCGCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PIARIAVGIARS*LLFWGAWRCAH Trigger: ATGCGCGCACCTCCAGGCGCCCCAGAAAAGCAACCAGCTCCTGGCGATGCCTACGGCGATGCGGGCTATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS GCA 72 bp | CTCTCAGGGTTCGAGGGCCAAAGCCACCCAGATTTCTaGAAGCGCCGGGCTCTGTCCACGGTGCTGGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSGFEGQSHPDF*KRRALSTVLER Trigger: GCGCTCCAGCACCGTGGACAGAGCCCGGCGCTTGCAGAAATCTGGGTGGCTTTGGCCCTCGAACCCTGAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128890.2 |
||
| CDS CAA 72 bp | ATAGCCCGCATCGCCGTAGGCATCGCCAGGAGCTGGTaGCTTTTCTGGGGCGCCTGGAGGTGCGCGCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: IARIAVGIARSW*LFWGAWRCAHE Trigger: TTCATGCGCGCACCTCCAGGCGCCCCAGAAAAGCAACCAGCTCCTGGCGATGCCTACGGCGATGCGGGCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 90 bp | GCGCCTGGAGGTGCGCGCATGAATGGGGCGGCCCAGCCTGTCTCCTaGAACACGAACCATAGGTTGCCAACCCAGAGCACCAGGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APGGARMNGAAQPVS*NTNHRLPTQSTRFR Trigger: CCTGAACCTGGTGCTCTGGGTTGGCAACCTATGGTTCGTGTTCAAGGAGACAGGCTGGGCCGCCCCATTCATGCGCGCACCTCCAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 72 bp | TTGCTTTTCTGGGGCGCCTGGAGGTGCGCGCATGAATaGGGCGGCCCAGCCTGTCTCCTTGAACACGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LLFWGAWRCAHE*GGPACLLEHEP Trigger: TGGTTCGTGTTCAAGGAGACAGGCTGGGCCGCCCCATTCATGCGCGCACCTCCAGGCGCCCCAGAAAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 72 bp | GGTGCGCGCATGAATGGGGCGGCCCAGCCTGTCTCCTaGAACACGAACCATAGGTTGCCAACCCAGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GARMNGAAQPVS*NTNHRLPTQST Trigger: GGTGCTCTGGGTTGGCAACCTATGGTTCGTGTTCAAGGAGACAGGCTGGGCCGCCCCATTCATGCGCGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 72 bp | AATTCGACTTCGATGTTGAGGGCACTCTCCGTCTTGTaGGCACACTCCACGCTCAGCCGAAGCTCTCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NSTSMLRALSVL*AHSTLSRSSPV Trigger: CACCGGAGAGCTTCGGCTGAGCGTGGAGTGTGCCAACAAGACGGAGAGTGCCCTCAACATCGAAGTCGAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS CAA 72 bp | TCAAATTCGACTTCGATGTTGAGGGCACTCTCCGTCTaGTTGGCACACTCCACGCTCAGCCGAAGCTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SNSTSMLRALSV*LAHSTLSRSSP Trigger: CGGAGAGCTTCGGCTGAGCGTGGAGTGTGCCAACAAGACGGAGAGTGCCCTCAACATCGAAGTCGAATTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS CAA 90 bp | ACCACCGAGGTGTTGAGTCCTGAAGTCACAGGGTCCCTCAGTTCCTaGCATGTGTTTCCTGTCTGGCGGCACATAGGCATCTCCTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: TTEVLSPEVTGSLSS*HVFPVWRHIGISLI Trigger: TATCAAGGAGATGCCTATGTGCCGCCAGACAGGAAACACATGCAAGGAACTGAGGGACCCTGTGACTTCAGGACTCAACACCTCGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CCA 72 bp | CTGGCGGCACATAGGCATCTCCTTGATAATGTTCTCTaGGTCAGTGGCCATCTTCACATCGGACAGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LAAHRHLLDNVL*VSGHLHIGQAF Trigger: AAAGGCCTGTCCGATGTGAAGATGGCCACTGACCCAGAGAACATTATCAAGGAGATGCCTATGTGCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 90 bp | ATAATGTTCTCTGGGTCAGTGGCCATCTTCACATCGGACAGGCCTTaGGCCCAGGCGGATGAGCTAACTAGCCACATGAAAGCGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: IMFSGSVAIFTSDRP*AQADELTSHMKANT Trigger: AGTGTTCGCTTTCATGTGGCTAGTTAGCTCATCCGCCTGGGCCAAAGGCCTGTCCGATGTGAAGATGGCCACTGACCCAGAGAACATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 90 bp | AGTTCCTTGCATGTGTTTCCTGTCTGGCGGCACATAGGCATCTCCTaGATAATGTTCTCTGGGTCAGTGGCCATCTTCACATCGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLHVFPVWRHIGIS*IMFSGSVAIFTSDR Trigger: CCTGTCCGATGTGAAGATGGCCACTGACCCAGAGAACATTATCAAGGAGATGCCTATGTGCCGCCAGACAGGAAACACATGCAAGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS GCA 72 bp | GAAGATCTTGGTAGTGCCCCCTTTAACGCAGGAGGGTaGATCAAAGTACACTTGGTGCAGCCTGAATGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EDLGSAPFNAGG*IKVHLVQPEWV Trigger: TACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGGGGGCACTACCAAGATCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS CCA 72 bp | CCCCCTTTAACGCAGGAGGGTGCATCAAAGTACACTTaGTGCAGCCTGAATGGGTACTCAAATTCGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PPLTQEGASKYT*CSLNGYSNSTS Trigger: CGAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS CCA 72 bp | GAAAGCGAACACTGCTGTGGCCAGGAAGTCCATCATTaGCCCTTTGTTGTTCTCTCGGTACTTGTTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ESEHCCGQEVHH*PFVVLSVLVLQ Trigger: CTGCAGAACAAGTACCGAGAGAACAACAAAGGGCCAATGATGGACTTCCTGGCCACAGCAGTGTTCGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 72 bp | GCCCCCTTTAACGCAGGAGGGTGCATCAAAGTACACTaGGTGCAGCCTGAATGGGTACTCAAATTCGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: APFNAGGCIKVH*VQPEWVLKFDF Trigger: GAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS CAA 90 bp | CTTGGTAGTGCCCCCTTTAACGCAGGAGGGTGCATCAAAGTACACTaGGTGCAGCCTGAATGGGTACTCAAATTCGACTTCGATGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGSAPFNAGGCIKVH*VQPEWVLKFDFDVE Trigger: CTCAACATCGAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGGGGGCACTACCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||
| CDS CCA 72 bp | ACAGGGTCCCTCAGTTCCTTGCATGTGTTTCCTGTCTaGCGGCACATAGGCATCTCCTTGATAATGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TGSLSSLHVFPV*RHIGISLIMFS Trigger: AGAGAACATTATCAAGGAGATGCCTATGTGCCGCCAGACAGGAAACACATGCAAGGAACTGAGGGACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS CAA 72 bp | CATGTGTTTCCTGTCTGGCGGCACATAGGCATCTCCTaGATAATGTTCTCTGGGTCAGTGGCCATCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HVFPVWRHIGIS*IMFSGSVAIFT Trigger: TGTGAAGATGGCCACTGACCCAGAGAACATTATCAAGGAGATGCCTATGTGCCGCCAGACAGGAAACACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069520.11 |
||
| CDS GCA 72 bp | CCTTTAACGCAGGAGGGTGCATCAAAGTACACTTGGTaGAGCCTGAATGGGTACTCAAATTCGACTTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: PLTQEGASKYTW*SLNGYSNSTSM Trigger: CATCGAAGTCGAATTTGAGTACCCATTCAGGCTGCACCAAGTGTACTTTGATGCACCCTCCTGCGTTAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069520.11 ENSMUST00000128890.2 |
||