RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNRG (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034940

Ensembl transcript IDs: ENSMUST00000049714.15, ENSMUST00000092834.12, ENSMUST00000138676.2, ENSMUST00000183456.8, ENSMUST00000183714.8

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGAAGAGGGTGAGGTGCCACAGGAGGTGACTATGTGTCCTCCTTaGCTGCCACTGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGG +
Preference number: 1 (lower is better)
Translates to: GEEGEVPQEVTMCPP*LPLSSGDSSALFTR
Trigger: CCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACAGTGGCAGGCAAGGAGGACACATAGTCACCTCCTGTGGCACCTCACCCTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp AAGGAGAATGGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATaGCAGGGAGGGTCTCCTTCAGAGCTGAGTTTCAGGAAGGGGAAG +
Preference number: 1 (lower is better)
Translates to: KENGVHRGCRLWALS*QGGSPSELSFRKGK
Trigger: CTTCCCCTTCCTGAAACTCAGCTCTGAAGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCCATTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 90 bp CACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTaGTCATTAGTCGCCATTCAATCTGTGGGTGAAGCTGCCCGACAC +
Preference number: 1 (lower is better)
Translates to: HQPQDRRQGTAPKPK*SLVAIQSVGEAARH
Trigger: GTGTCGGGCAGCTTCACCCACAGATTGAATGGCGACTAATGAGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp TGGAGAGAGGTGGCAACGAAGAGATTCCAGTTCACGGCTGTGACCTaGTGGGACAACGCCATGCTTTGTGTCATGCTTGATGTCGGGGCA +
Preference number: 1 (lower is better)
Translates to: WREVATKRFQFTAVT*WDNAMLCVMLDVGA
Trigger: TGCCCCGACATCAAGCATGACACAAAGCATGGCGTTGTCCCACCAGGTCACAGCCGTGAACTGGAATCTCTTCGTTGCCACCTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp TCAGATGGTATCCATGGGCACCTCGAGACCCTTCTGTCTCAAGCATaGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCA +
Preference number: 1 (lower is better)
Translates to: SDGIHGHLETLLSQA*PHRSHTNHRTEGKA
Trigger: TGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCATGGATACCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 90 bp GGTATGGTGGCACATGCCTGTGCTCCAGTACTTGGGAGGCAGACCTaGGAGGATCGATGCAAACTGAAGGTCAACCAGGGGTATGCATCA +
Preference number: 1 (lower is better)
Translates to: GMVAHACAPVLGRQT*EDRCKLKVNQGYAS
Trigger: TGATGCATACCCCTGGTTGACCTTCAGTTTGCATCGATCCTCTCAGGTCTGCCTCCCAAGTACTGGAGCACAGGCATGTGCCACCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 90 bp TTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCTTCTCTGCAGTCTTCTTGTGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: LNSGPSEEQSGALTH*AISPAFSAVFLWRE
Trigger: CTCTCTCCACAAGAAGACTGCAGAGAAGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 90 bp GCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCTTCTCTaGAGTCTTCTTGTGGAGAGAGGTGGCAACGAAGAGATTCCAGTT +
Preference number: 1 (lower is better)
Translates to: AVGCSYPLSHLTSLL*SLLVERGGNEEIPV
Trigger: AACTGGAATCTCTTCGTTGCCACCTCTCTCCACAAGAAGACTGCAGAGAAGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 90 bp ATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT +
Preference number: 1 (lower is better)
Translates to: ILLRMVVSHHVVAGI*TLDLRKSSRVLLPT
Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp GAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTT +
Preference number: 1 (lower is better)
Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGAL
Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 90 bp AGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTaGTGGAATGTCTACAGCAGGCTCCAATGGCTCCTGCATGACAGA +
Preference number: 1 (lower is better)
Translates to: RQTTGYTHLDLHSGI*WNVYSRLQWLLHDR
Trigger: TCTGTCATGCAGGAGCCATTGGAGCCTGCTGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp CAAACCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTaGAATGTCTACAGCAGGCTCCAATGGCTCCTGCATGACAGATGT +
Preference number: 1 (lower is better)
Translates to: QTTGYTHLDLHSGIC*NVYSRLQWLLHDRC
Trigger: ACATCTGTCATGCAGGAGCCATTGGAGCCTGCTGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp AAACCAGAGGAGATAAGCAAGCAAATGTCCAGTGCCACGTGCAGTTaGGGTCTGGTAATTTTACCTCAAGTCTCAAAGAGGGGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: KPEEISKQMSSATCS*GLVILPQVSKRGRQ
Trigger: CTGCCTGCCCCTCTTTGAGACTTGAGGTAAAATTACCAGACCCCAACTGCACGTGGCACTGGACATTTGCTTGCTTATCTCCTCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 90 bp TCTTGGCTGGACTTGGAAAGGAGGGGGCTTTTCAATTATTTGGTGTaGCCTTTCCACATAAGTGGTACCCAATCTAGACAAACCACAGGC +
Preference number: 1 (lower is better)
Translates to: SWLDLERRGLFNYLV*PFHISGTQSRQTTG
Trigger: GCCTGTGGTTTGTCTAGATTGGGTACCACTTATGTGGAAAGGGCACACCAAATAATTGAAAAGCCCCCTCCTTTCCAAGTCCAGCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 90 bp TTAAATTATATAAAGAGGACAAGAGTAATAGGGTATGGTGGCACATaGCTGTGCTCCAGTACTTGGGAGGCAGACCTGAGAGGATCGATG +
Preference number: 1 (lower is better)
Translates to: LNYIKRTRVIGYGGT*LCSSTWEADLRGSM
Trigger: CATCGATCCTCTCAGGTCTGCCTCCCAAGTACTGGAGCACAGGCATGTGCCACCATACCCTATTACTCTTGTCCTCTTTATATAATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp CTGCATTTTAAATTATATAAAGAGGACAAGAGTAATAGGGTATGGTaGCACATGCCTGTGCTCCAGTACTTGGGAGGCAGACCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: LHFKLYKEDKSNRVW*HMPVLQYLGGRPER
Trigger: CCTCTCAGGTCTGCCTCCCAAGTACTGGAGCACAGGCATGTGCCACCATACCCTATTACTCTTGTCCTCTTTATATAATTTAAAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 90 bp GGTCTGCATTTTAAATTATATAAAGAGGACAAGAGTAATAGGGTATaGTGGCACATGCCTGTGCTCCAGTACTTGGGAGGCAGACCTGAG +
Preference number: 1 (lower is better)
Translates to: GLHFKLYKEDKSNRV*WHMPVLQYLGGRPE
Trigger: CTCAGGTCTGCCTCCCAAGTACTGGAGCACAGGCATGTGCCACCATACCCTATTACTCTTGTCCTCTTTATATAATTTAAAATGCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 90 bp TTACTGTTTCCAAGGACACGGACCAGGCTCTTGGCTAACAAGAGCTaGGGTAAAGCTGAATGCAACATGAGTCATTTCAATACATGCATG +
Preference number: 1 (lower is better)
Translates to: LLFPRTRTRLLANKS*GKAECNMSHFNTCM
Trigger: CATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTTACCTCAGCTCTTGTTAGCCAAGAGCCTGGTCCGTGTCCTTGGAAACAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 90 bp GAAGTAGAAACAAAAATAATCTTATGGCTGGAGGCCACCACAGCATaGGGAACTGTATTAAAAGGTCCCAGCATTAGGAAGGCTGAGAAC +
Preference number: 1 (lower is better)
Translates to: EVETKIILWLEATTA*GTVLKGPSIRKAEN
Trigger: GTTCTCAGCCTTCCTAATGCTGGGACCTTTTAATACAGTTCCTCATGCTGTGGTGGCCTCCAGCCATAAGATTATTTTTGTTTCTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 90 bp CCCTTTGAAAATTCAGTGCTGCTAACCGTTTTCCTTTGCTGCATTTaGAGTGTATGTACACACACACACACACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: PFENSVLLTVFLCCI*SVCTHTHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACACTTCAAATGCAGCAAAGGAAAACGGTTAGCAGCACTGAATTTTCAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 90 bp ACATACACTTCAGCAGCAGATTACTCCTCACAGAAAACTCTGGTCTaGATTTTAAATTATATAAAGAGGACAAGAGTAATAGGGTATGGT +
Preference number: 1 (lower is better)
Translates to: TYTSAADYSSQKTLV*ILNYIKRTRVIGYG
Trigger: ACCATACCCTATTACTCTTGTCCTCTTTATATAATTTAAAATGCAGACCAGAGTTTTCTGTGAGGAGTAATCTGCTGCTGAAGTGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCTTTCGCCCTGCCTTCTaGGCCACAGCAAGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPFRPAF*ATARPR
Trigger: CCTTGGCCTTGCTGTGGCCCAGAAGGCAGGGCGAAA...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTGGTCAACCAGGGGTATaGATCAAGGCCCTATCCTTA +
Preference number: 2 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPGQPGV*IKALSL
Trigger: TAAGGATAGGGCCTTGATGCATACCCCTGGTTGACC...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCGGTGGCACATGCCTGTaGTCCAGTACTTGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPGGTCL*SSTWEA
Trigger: TGCCTCCCAAGTACTGGAGCACAGGCATGTGCCACC...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACGGAAGGGGAAGAGGGTaGGGTGCCACAGGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYGRGRG*GATGGD
Trigger: GTCACCTCCTGTGGCACCTCACCCTCTTCCCCTTCC...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTCTCTCCCAGACTCCCTaGCTTCTCCTGGGAACAACC +
Preference number: 2 (lower is better)
Translates to: SHTNHRTEGKARHPNPSALSQTP*LLLGTT
Trigger: GGTTGTTCCCAGGAGAAGCCAGGGAGTCTGGGAGAG...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAAGGCGTGCATCGTGGATaGAGGCTCTGGGCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: LLLWGMERHWGPLQECTEGVHRG*RLWALS
Trigger: TGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACTCCAGTTCACGGCTGTaGCCTGGTGGGACAACGCCA +
Preference number: 2 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHSSSRL*PGGTTP
Trigger: TGGCGTTGTCCCACCAGGTCACAGCCGTGAACTGGA...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAAACTATGTGTCCTCCTTaGCTGCCACTGTCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQTMCPP*LPLSSG
Trigger: TCCACTGGACAGTGGCAGGCAAGGAGGACACATAGT...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGTGGGACCCTACCTCCTaGGGAATGCTTCAAAGAGAC +
Preference number: 2 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQWDPTS*GMLQRD
Trigger: GTCTCTTTGAAGCATTCCCCAGGAGGTAGGGTCCCA...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAACAGTGGAGACAGCAGTaGTCTCTTTACCAGGACAGA +
Preference number: 2 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQQWRQQ*SLYQDR
Trigger: TCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTG...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTGCCATGTGGTCACAATaGAGACAGCTTTCTGACTGT +
Preference number: 2 (lower is better)
Translates to: SHTNHRTEGKARHPNPSAAMWSQ*RQLSDC
Trigger: ACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGC...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp CAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTGGAACACCTGCCACTGTCCAGTaGAGACAGCAGTGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: QCRQLSDCQELEMTSPGTPATVQ*RQQCSL
Trigger: AAGAGAGCACTGCTGTCTCCACTGGACAGTGGCAGG...TGTTCCAGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACGGTCTCCTTCAGAGCTaGGTTTCAGGAAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHGLLQS*VSGRGR
Trigger: TCTTCCCCTTCCTGAAACTCAGCTCTGAAGGAGACC...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCTTCCTTTGCTGCATTTaGAGTGTATGTACACACACA +
Preference number: 2 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPFLCCI*SVCTHT
Trigger: TGTGTGTGTACATACACTTCAAATGCAGCAAAGGAA...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCTGCCAAGTCCAGCCTTaGTGGCTCCTCTGCAGTCTT +
Preference number: 2 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLCQVQP*WLLCSL
Trigger: AAGACTGCAGAGGAGCCAGCAAGGCTGGACTTGGCA...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAACAAGTCCAGCCTTGCTaGCTCCTCTGCAGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LLLWGMERHWGPLQECTEQVQPC*LLCSLL
Trigger: AAGAAGACTGCAGAGGAGCCAGCAAGGCTGGACTTG...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCTGCATCTTGTTTATCTaGCAAATTCCTATACCAGTG +
Preference number: 2 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPCILFI*QIPIPV
Trigger: CACTGGTATAGGAATTTGTCAGATAAACAAGATGCA...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACCTTTCAGTAGGCCAGTaGTTCTCAACCTGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHLSVGQ*FSTCRP
Trigger: AGGCCTACAGGTTGAGAACCACTGGCCTACTGAAAG...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp GGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGGCCTTCTGTCTCAAGCATaGCCACACAGGTCACACACC +
Preference number: 2 (lower is better)
Translates to: GTQSRQTTGYTHLDLHSGLLSQA*PHRSHT
Trigger: GGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAG...GCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 90 bp CAAGGCCAAGGAGAGCTGCATCACCAGCTGAAAATGATCCCTAGCTaGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCC +
Preference number: 2 (lower is better)
Translates to: QGQGELHHQLKMIPS*GIIHKVQEGRAQRP
Trigger: GGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGGGATCATTTTCAGCTGGTGATGCAGCTCTCCTTGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCAGGATCGATGCAAACTaGAGGTCAACCAGGGGTATG +
Preference number: 2 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLRIDAN*RSTRGM
Trigger: CATACCCCTGGTTGACCTTCAGTTTGCATCGATCCT...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAAGAGGCCACCACAGCATaGGGAACTGTATTAAAAGGT +
Preference number: 2 (lower is better)
Translates to: LLLWGMERHWGPLQECTEEATTA*GTVLKG
Trigger: ACCTTTTAATACAGTTCCTCATGCTGTGGTGGCCTC...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp TGGTCACAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTGTGAGCCTTTCCCTTTaGAAATTCAGTGCTGCTAAC +
Preference number: 2 (lower is better)
Translates to: WSQCRQLSDCQELEMTSPVSLSL*KFSAAN
Trigger: GTTAGCAGCACTGAATTTTCAAAGGGAAAGGCTCAC...AGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTGTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGCACCTCCCAAGGAGTaGCTAACTAGGAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSAPPKE*LTRSGE
Trigger: TTCTCCACTCCTAGTTAGTCACTCCTTGGGAGGTGC...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCAGTGCCACGTGCAGTTaGGGTCTGGTAATTTTACCT +
Preference number: 2 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLSATCS*GLVILP
Trigger: AGGTAAAATTACCAGACCCCAACTGCACGTGGCACT...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR GCA 90 bp AACAGATGTCATGGATACAGGCCACTGGGCAGAAAACACTTCACACAGCATTTCGGGCCATTACAAGAGTaGACTGAAAAGCAGCCTACC +
Preference number: 2 (lower is better)
Translates to: NRCHGYRPLGRKHFTQHFGPLQE*TEKQPT
Trigger: GGTAGGCTGCTTTTCAGTGCACTCTTGTAATGGCCC...GAAATGCTGTGTGAAGTGTTTTCTGCCCAGTGGCCTGTATCCATGACATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp CTGGGCAGAAAACACTTCACACAGCATTTCCAGAAACGCTTCAGTGGTATAAATTGTTACTCTGGGGCATaGAGAGACACTGGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: LGRKHFTQHFQKRFSGINCYSGA*RDTGGH
Trigger: ATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACA...ATTTATACCACTGAAGCGTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACACTCCCTGGCTTCTCCTaGGAACAACCCCTCTTAACA +
Preference number: 2 (lower is better)
Translates to: KGKATHQLLTYRTMFHITLPGFS*EQPLLT
Trigger: TGTTAAGAGGGGTTGTTCCCAGGAGAAGCCAGGGAG...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 90 bp CCTATTTCTTGGCTGGACTTGGAAAGGAGGGGGCTTTTCAATTATTaGGTGTGCCCTTTCCACATAAGTGGTACCCAATCTAGACAAACC +
Preference number: 2 (lower is better)
Translates to: PISWLDLERRGLFNY*VCPFHISGTQSRQT
Trigger: GGTTTGTCTAGATTGGGTACCACTTATGTGGAAAGGGCACACCAAATAATTGAAAAGCCCCCTCCTTTCCAAGTCCAGCCAAGAAATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACAATTCCTATACCAGTGTaGGCCTTTCCCTTTGAAAAT +
Preference number: 2 (lower is better)
Translates to: PQATHILTCILASAGMSTIPIPV*AFPFEN
Trigger: ATTTTCAAAGGGAAAGGCTCACACTGGTATAGGAAT...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp CTGGGCAGAAAACACTTCACACAGCATTTCCAGAAACGCTTCAGTGGTATAAATGAAAACCACATCAGATaGGGGGAGCATGTGAGATCC +
Preference number: 2 (lower is better)
Translates to: LGRKHFTQHFQKRFSGINENHIR*GEHVRS
Trigger: GGATCTCACATGCTCCCCTCATCTGATGTGGTTTTC...ATTTATACCACTGAAGCGTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR TCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACAAGCTGAATGCAACATaGGTCATTTCAATACATGCA +
Preference number: 2 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHKLNAT*VISIHA
Trigger: TGCATGTATTGAAATGACTCATGTTGCATTCAGCTT...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp CTAACTAGGAGTGGAGAAGATCTAGCTCACAGGTACTTTAACAGATGTCATGGAAGTAATAGGGTATGGTaGCACATGCCTGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LTRSGEDLAHRYFNRCHGSNRVW*HMPVLQ
Trigger: CTGGAGCACAGGCATGTGCCACCATACCCTATTACT...TCCATGACATCTGTTAAAGTACCTGTGAGCTAGATCTTCTCCACTCCTAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CCA 90 bp AACAGATGTCATGGATACAGGCCACTGGGCAGAAAACACTTCACACAGCATTTCGTCTCCAAAGACCATTaGAAAAGAGATATCTACATT +
Preference number: 2 (lower is better)
Translates to: NRCHGYRPLGRKHFTQHFVSKDH*KRDIYI
Trigger: AATGTAGATATCTCTTTTCCAATGGTCTTTGGAGAC...GAAATGCTGTGTGAAGTGTTTTCTGCCCAGTGGCCTGTATCCATGACATCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATaGCAGGGAGGGTCTCCTTCAGAGCTGAGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: GVHRGCRLWALS*QGGSPSELSFR
Trigger: CCTGAAACTCAGCTCTGAAGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp TCCAAGGAGAATGGCGTGCATCGTGGATGCAGGCTCTaGGCCCTGTCATGGCAGGGAGGGTCTCCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: SKENGVHRGCRL*ALSWQGGSPSE
Trigger: CTCTGAAGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCCATTCTCCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp AACAAAGGCTCCAAGGAGAATGGCGTGCATCGTGGATaGAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCT +
Preference number: 3 (lower is better)
Translates to: NKGSKENGVHRG*RLWALSWQGGS
Trigger: AGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCCATTCTCCTTGGAGCCTTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CAA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGGACTATGTGTCCTCCTaGCCTGCCACTGTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQDYVSS*PATVQW
Trigger: CCACTGGACAGTGGCAGGCAAGGAGGACACATAGTC...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 72 bp GCACATGCCTGTGCTCCAGTACTTGGGAGGCAGACCTaGGAGGATCGATGCAAACTGAAGGTCAACCAGGGG +
Preference number: 3 (lower is better)
Translates to: AHACAPVLGRQT*EDRCKLKVNQG
Trigger: CCCCTGGTTGACCTTCAGTTTGCATCGATCCTCTCAGGTCTGCCTCCCAAGTACTGGAGCACAGGCATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 72 bp GGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCTTCTCTGCAGTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: GPSEEQSGALTH*AISPAFSAVFL
Trigger: CAAGAAGACTGCAGAGAAGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 72 bp CTGTCAGGAGCTGGAGATGACGTCACCTGGAACAGATaGGTAACTGGACTCGCCAGCTTTTCGCCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LSGAGDDVTWNR*VTGLASFSPCL
Trigger: AAGGCAGGGCGAAAAGCTGGCGAGTCCAGTTACTCATCTGTTCCAGGTGACGTCATCTCCAGCTCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp AGCAGATTCTTAACAAAGGCTCCAAGGAGAATGGCGTaGATCGTGGATGCAGGCTCTGGGCCCTGTCATGGC +
Preference number: 3 (lower is better)
Translates to: SRFLTKAPRRMA*IVDAGSGPCHG
Trigger: GCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCCATTCTCCTTGGAGCCTTTGTTAAGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp GGTGACTATGTGTCCTCCTTGCCTGCCACTGTCCAGTaGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCA +
Preference number: 3 (lower is better)
Translates to: GDYVSSLPATVQ*RQQCSLYQDRA
Trigger: TGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACAGTGGCAGGCAAGGAGGACACATAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp ATCCATGGGCACCTCGAGACCCTTCTGTCTCAAGCATaGCCACACAGGTCACACACCAACCACAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: IHGHLETLLSQA*PHRSHTNHRTE
Trigger: TTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CAA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCTTGAGAACGGTAACCTaGGTTACTGTTTCCAAGGAC +
Preference number: 3 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPLRTVT*VTVSKD
Trigger: GTCCTTGGAAACAGTAACCAAGGTTACCGTTCTCAA...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp ACCACTGTGTTCGTTCTCAGCTCTCTCCTGAAGTACTaGCAAGTCCAGCCTTGCTGGCTCCTCTGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: TTVFVLSSLLKY*QVQPCWLLCSL
Trigger: AAGACTGCAGAGGAGCCAGCAAGGCTGGACTTGGCAGTACTTCAGGAGAGAGCTGAGAACGAACACAGTGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp CAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTaGTCATTAGTCGCCATTCAATCTGTGGGTGAAGCT +
Preference number: 3 (lower is better)
Translates to: QDRRQGTAPKPK*SLVAIQSVGEA
Trigger: AGCTTCACCCACAGATTGAATGGCGACTAATGAGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CAA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAACCAGTGGCAGGGGGCTaGGCAGTACTTGCATTCTAT +
Preference number: 3 (lower is better)
Translates to: LLLWGMERHWGPLQECTEPVAGG*AVLAFY
Trigger: ATAGAATGCAAGTACTGCCAAGCCCCCTGCCACTGG...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CAA 90 bp TGGTCACAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTCAGTGCCACGTGCAGTaGGGGTCTGGTAATTTTACC +
Preference number: 3 (lower is better)
Translates to: WSQCRQLSDCQELEMTSPQCHVQ*GSGNFT
Trigger: GGTAAAATTACCAGACCCCAACTGCACGTGGCACTG...AGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp GACCCTACCTCCTGGGGAATGCTTCAAAGAGACCAGTaGCAGGGGGCTTGGCAGTACTTGCATTCTATTTAT +
Preference number: 3 (lower is better)
Translates to: DPTSWGMLQRDQ*QGAWQYLHSIY
Trigger: ATAAATAGAATGCAAGTACTGCCAAGCCCCCTGCCACTGGTCTCTTTGAAGCATTCCCCAGGAGGTAGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp ATAAAGAGGACAAGAGTAATAGGGTATGGTGGCACATaGCTGTGCTCCAGTACTTGGGAGGCAGACCTGAGA +
Preference number: 3 (lower is better)
Translates to: IKRTRVIGYGGT*LCSSTWEADLR
Trigger: TCTCAGGTCTGCCTCCCAAGTACTGGAGCACAGGCATGTGCCACCATACCCTATTACTCTTGTCCTCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp ACCACCACCACCTTACTGTTCCTTTCAGTAGGCCAGTaGTTCTCAACCTGTAGGCCTGTATCCATGACATCT +
Preference number: 3 (lower is better)
Translates to: TTTTLLFLSVGQ*FSTCRPVSMTS
Trigger: AGATGTCATGGATACAGGCCTACAGGTTGAGAACCACTGGCCTACTGAAAGGAACAGTAAGGTGGTGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp CCAGAGGAGATAAGCAAGCAAATGTCCAGTGCCACGTaGAGTTGGGGTCTGGTAATTTTACCTCAAGTCTCA +
Preference number: 3 (lower is better)
Translates to: PEEISKQMSSAT*SWGLVILPQVS
Trigger: TGAGACTTGAGGTAAAATTACCAGACCCCAACTGCACGTGGCACTGGACATTTGCTTGCTTATCTCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CAA 90 bp CTAACTAGGAGTGGAGAAGATCTAGCTCACAGGTACTTTAACAGATGTCATGGATTCTCTGCAGTCTTCTaGTGGAGAGAGGTGGCAACG +
Preference number: 3 (lower is better)
Translates to: LTRSGEDLAHRYFNRCHGFSAVF*WREVAT
Trigger: CGTTGCCACCTCTCTCCACAAGAAGACTGCAGAGAA...TCCATGACATCTGTTAAAGTACCTGTGAGCTAGATCTTCTCCACTCCTAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 72 bp CCAAGGACACGGACCAGGCTCTTGGCTAACAAGAGCTaGGGTAAAGCTGAATGCAACATGAGTCATTTCAAT +
Preference number: 3 (lower is better)
Translates to: PRTRTRLLANKS*GKAECNMSHFN
Trigger: ATTGAAATGACTCATGTTGCATTCAGCTTTACCTCAGCTCTTGTTAGCCAAGAGCCTGGTCCGTGTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 72 bp GACATTCATCATAGTAGTTGGGCTACAGCTGCGATGTaGGAGGTCACAGGGGACCTGTTTAAAAGTCACTTG +
Preference number: 3 (lower is better)
Translates to: DIHHSSWATAAM*EVTGDLFKSHL
Trigger: CAAGTGACTTTTAAACAGGTCCCCTGTGACCTCTCACATCGCAGCTGTAGCCCAACTACTATGATGAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp GAGATAAGCAAGCAAATGTCCAGTGCCACGTGCAGTTaGGGTCTGGTAATTTTACCTCAAGTCTCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: EISKQMSSATCS*GLVILPQVSKR
Trigger: CCTCTTTGAGACTTGAGGTAAAATTACCAGACCCCAACTGCACGTGGCACTGGACATTTGCTTGCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp GACTTGGAAAGGAGGGGGCTTTTCAATTATTTGGTGTaGCCTTTCCACATAAGTGGTACCCAATCTAGACAA +
Preference number: 3 (lower is better)
Translates to: DLERRGLFNYLV*PFHISGTQSRQ
Trigger: TTGTCTAGATTGGGTACCACTTATGTGGAAAGGGCACACCAAATAATTGAAAAGCCCCCTCCTTTCCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp ACAGGTACTTTAACAGATGTCATGGATACAGGCCACTaGGCAGAAAACACTTCACACAGCATTTCCAGAAAC +
Preference number: 3 (lower is better)
Translates to: TGTLTDVMDTGH*AENTSHSISRN
Trigger: GTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAGTGGCCTGTATCCATGACATCTGTTAAAGTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR-3UTR CAA 90 bp AACAGATGTCATGGATACAGGCCACTGGGCAGAAAACACTTCACACAGCATTTCGGTCTCCAAAGACCATaGGAAAAGAGATATCTACAT +
Preference number: 3 (lower is better)
Translates to: NRCHGYRPLGRKHFTQHFGLQRP*EKRYLH
Trigger: ATGTAGATATCTCTTTTCCAATGGTCTTTGGAGACC...GAAATGCTGTGTGAAGTGTTTTCTGCCCAGTGGCCTGTATCCATGACATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR TCA 72 bp CTGACAAATTCCTATACCAGTGTGAGCCTTTCCCTTTaGAAATTCAGTGCTGCTAACCGTTTTCCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: LTNSYTSVSLSL*KFSAANRFPLL
Trigger: CAGCAAAGGAAAACGGTTAGCAGCACTGAATTTTCAAAGGGAAAGGCTCACACTGGTATAGGAATTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CCA 72 bp TTTAAATTATATAAAGAGGACAAGAGTAATAGGGTATaGTGGCACATGCCTGTGCTCCAGTACTTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: FKLYKEDKSNRV*WHMPVLQYLGG
Trigger: GCCTCCCAAGTACTGGAGCACAGGCATGTGCCACCATACCCTATTACTCTTGTCCTCTTTATATAATTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR GCA 72 bp TCAGCAGCAGATTACTCCTCACAGAAAACTCTGGTCTaGATTTTAAATTATATAAAGAGGACAAGAGTAATA +
Preference number: 3 (lower is better)
Translates to: SAADYSSQKTLV*ILNYIKRTRVI
Trigger: TATTACTCTTGTCCTCTTTATATAATTTAAAATGCAGACCAGAGTTTTCTGTGAGGAGTAATCTGCTGCTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAAGGATGCCAGTGCTGCTaGCGCTGCTGCAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQGCQCC*RCCRAR
Trigger: GCGGGCTCTGCAGCAGCGTCAGCAGCACTGGCATCC...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTCCTCCACCTCGCCAGTaGGATCCTTGTACTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPPPPRQ*DPCTCL
Trigger: GAGACAAGTACAAGGATCTCACTGGCGAGGTGGAGG...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAAAAACATGAAGCTGCCTaGCCCGCCGGGCCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LLLWGMERHWGPLQECTEKHEAA*PAGPRA
Trigger: GGCGCGGGGCCCGGCGGGGCAGGCAGCTTCATGTTT...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAATGTACTTGTCTCGGATaGCGGGCAGCGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQCTCLG*RAAQPS
Trigger: AGAGGGCTGCGCTGCCCGTCATCCGAGACAAGTACA...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGGCCACTGGAAGTTGGTaGTGCAGCTCCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQATGSW*CSSTHW
Trigger: CCAGTGGGTGGAGCTGCAGCACCAACTTCCAGTGGC...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCCTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPLLLHV*SVLWAC
Trigger: GCAGGCCCACAGTACACTCCAGACATGCAGAAGCAG...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTGGAATTACTGGTTTTTaGGGAAGCAGGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPGITGF*GSRHLL
Trigger: CAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCC...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTGGAGGAAAAATCCAGTaGATTCTCATCTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPGGKIQ*ILIWCE
Trigger: CTCACACCAGATGAGAATTCACTGGATTTTTCCTCC...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTTCTGCAAAGTCGTCCTaGTCCCCAGCAGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHTNHRTEGKARHPNPSASAKSS*SPADAG
Trigger: CCCTGCATCTGCTGGGGAGCAGGACGACTTTGCAGA...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAATGTCTCCGAGTTGAATaGCCGGCTCCTGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQCLRVE*PAPGVH
Trigger: GTGGACTCCAGGAGCCGGGCATTCAACTCGGAGACA...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCGATGCTGGAGTGGGGTaGATCTTAGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPDAGVG*ILASLE
Trigger: TTCCAGAGATGCTAAGATGCACCCCACTCCAGCATC...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGTCCAAGGAGGCATTCTaGACTGAGCAGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQSKEAF*TEQGPE
Trigger: CTCAGGACCCTGCTCAGTCCAGAATGCCTCCTTGGA...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTGAGAATTTACTGGAGTaGAAGTCGGCAAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPENLLE*KSAKSS
Trigger: AGATGACTTTGCCGACTTCCACTCCAGTAAATTCTC...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCGTGCGAAGCCACACTaGAAGCCGGGCTTGGACATG +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYRAKPH*KPGLDM
Trigger: CATGTCCAAGCCCGGCTTCCAGTGTGGCTTCGCACG...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTCTTTCCCACCTGGTTTaGTGGGTAGGCTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: SHTNHRTEGKARHPNPSALSHLV*WVGWHE
Trigger: TTCATGCCAGCCTACCCATCAAACCAGGTGGGAAAG...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTGATTTCGAAGCATCTTaGAAATCCTGGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPDFEAS*KSWKSS
Trigger: AGATGACTTCCAGGATTTTCAAGATGCTTCGAAATC...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TGGTCACAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTAGCAGGTGGGTGCTGTaGCCCTTCCACAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSQCRQLSDCQELEMTSPSRWVL*PFHSAA
Trigger: AGCAGCACTGTGGAAGGGGCACAGCACCCACCTGCT...AGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTGTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTGGAACACCTCCTTGCCAACACTaGTGCCACCGATGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QCRQLSDCQELEMTSPGTPPCQH*CHRWRG
Trigger: TCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGG...TGTTCCAGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAATGGCATTGGCCCCATTaGTATTCCTGCCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQWHWPH*YSCLHC
Trigger: GCAATGCAGGCAGGAATACCAATGGGGCCAATGCCA...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCGTTGGCTGGCTCACTaGGGTAGGCAGAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYRWLAH*GRQSHR
Trigger: CCTATGACTCTGCCTACCCCAGTGAGCCAGCCAACG...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTGGAACAGAAGCCACTGGAAGTTaGTGCTGCAGCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: QCRQLSDCQELEMTSPGTEATGS*CCSSTH
Trigger: GTGGGTGGAGCTGCAGCACCAACTTCCAGTGGCTTC...TGTTCCAGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACACTCAAGAAAGGTGGCTaGCCCAGGAAAGGCACACCC +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTLKKGG*PRKGTP
Trigger: GGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAG...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACAGGAAGTGTTCTCTTTaGACTCCTCCATGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYRKCSL*TPPWPA
Trigger: GGCTGGCCATGGAGGAGTTCAAAGAGAACACTTCCT...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTGGAACAGCTCCTGAGCGTTTTTaGTCCCGGGCCGTAACATAC +
Preference number: 4 (lower is better)
Translates to: QCRQLSDCQELEMTSPGTAPERF*SRAVTY
Trigger: GTATGTTACGGCCCGGGATCAAAAACGCTCAGGAGC...TGTTCCAGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACAGTGTACTGTGGGCCTaGAGGACGCATGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYSVLWA*RTHAQE
Trigger: TTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACT...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAATTCTCCAAAGTCGTCTaGACCCTCCTTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLWGMERHWGPLQECTEFSKVV*TLLGGL
Trigger: GAGACCCCCAAGGAGGGTGCAGACGACTTTGGAGAA...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCCCTGCGGCAGGAGGATaGTGGCCACTAACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLPAAGG*WPLTVG
Trigger: ACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGG...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp GGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGGCAGGCACACCCGCTGCTaGCATTGGCCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: GTQSRQTTGYTHLDLHSGRHTRC*HWPHWY
Trigger: ATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCT...GCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACGCGGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGC...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACAATGGGTAGGCTGGCATaGAGCCACTGGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTMGRLA*SHWKLV
Trigger: CACCAACTTCCAGTGGCTTCATGCCAGCCTACCCAT...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAACAGTGGAAATCCCTTTaGACACTGCGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQQWKSL*TLRICL
Trigger: CAGACAAATACGCAGTGTTCAAAGGGATTTCCACTG...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAAACCATAGGGAATCCTTaGTGTTGCATTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQTIGNP*CCIGIR
Trigger: CCTGATTCCAATGCAACAGCAAGGATTCCCTATGGT...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTCCTTGCCAACACTGCTaGCACCGATGGAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSPCQHC*HRWRGG
Trigger: ACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGG...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACCTCCCTAGGCATCTCTaGCACTCATACGCGTATCTC +
Preference number: 4 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHLPRHL*HSYAYL
Trigger: GAGATACGCGTATGAGTGGCAGAGATGCCTAGGGAG...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACAAAGCATCAGGGCTCATaGCAGGAACACCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTKHQGS*QEHPSV
Trigger: CACAGAGGGGTGTTCCTGCCATGAGCCCTGATGCTT...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp GCCTTAGAGCAGCCCTCAGTGCAAAGCAAGCATTTCCAATTTCTGTTTGAGAAAAGAGGGCATCGCCGTTaGCTGGCTCACTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ALEQPSVQSKHFQFLFEKRGHRR*LAHWGR
Trigger: CCTACCCCAGTGAGCCAGCCAACGGCGATGCCCTCT...TTTCTCAAACAGAAATTGGAAATGCTTGCTTTGCACTGAGGGCTGCTCTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTTCCTTCAGCAACTGCTaGAGTTTCTCACTACACACA +
Preference number: 4 (lower is better)
Translates to: SHTNHRTEGKARHPNPSASFSNC*SFSLHT
Trigger: TGTGTGTAGTGAGAAACTCCAGCAGTTGCTGAAGGA...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTAAGAAGTTGGCACAGCTaGCGTGGTACTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLRSWHS*RGTGVL
Trigger: GAGGACACCAGTACCACGCCAGCTGTGCCAACTTCT...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TGGTCACAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTCCTGTTTCTCGCCACTaGAATCCACTGAGGAGAACA +
Preference number: 4 (lower is better)
Translates to: WSQCRQLSDCQELEMTSPPVSRH*NPLRRT
Trigger: TGTTCTCCTCAGTGGATTGCAGTGGCGAGAAACAGG...AGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTGTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTACCCGCTGCTGGCATTaGCCCCATTGGTATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSTRCWH*PHWYSC
Trigger: GCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGT...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGTCTGGAGTGTACTGTaGGCCTGCAGGACGCATGCT +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSVWSVL*ACRTHA
Trigger: AGCATGCGTCCTGCAGGCCCACAGTACACTCCAGAC...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACATGCAGCTCCACCCACTaGTCCAACAAGGTTGATACC +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTCSSTH*SNKVDT
Trigger: GGTATCAACCTTGTTGGACCAGTGGGTGGAGCTGCA...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAAAGTCATCTTCACTCTTaGTGGAGGAAGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQSHLHS*WRKCSL
Trigger: AAGAGAACACTTCCTCCACCAAGAGTGAAGATGACT...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAATGGATGAGAATTTACTaGAGTGGAAGTCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQWMRIY*SGSRQS
Trigger: ACTTTGCCGACTTCCACTCCAGTAAATTCTCATCCA...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGATCATCGATGGATCCTaGTTTCGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQIIDGS*FRSILK
Trigger: TTTCAAGATGCTTCGAAATCAGGATCCATCGATGAT...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAAAGCAGATGCAGGGTTTaGATACTCCCCAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLLWGMERHWGPLQECTESRCRV*ILPKEV
Trigger: AACCTCTTTGGGGAGTATTCAAACCCTGCATCTGCT...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAACAAGCTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLLWGMERHWGPLQECTEQAPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGCTTG...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACATGGGTTCAACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTWVQHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTTGAACCCA...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTACCTGTGTCTGTGTCTaGTGTGCAGCTCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSTCVCV*CAAPEA
Trigger: TGCCTCAGGAGCTGCACAGCAGACACAGACACAGGT...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACATGTCCTTCAGCAACTaGTGGAGTTTCTCACTACAC +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYMSFSN*WSFSLH
Trigger: GTGTAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCGTCCGAGAGTTTCCCTaGGAAGTCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLVREFP*EVQMTS
Trigger: TGATGTCATCTGGACTTCCCAGGGAAACTCTCGGAC...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CTGGGCAGAAAACACTTCACACAGCATTTCCAGAAACGCTTCAGTGGTATAAATGGAGCCGCAGGGAACTaGCTCAAAGCATCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGRKHFTQHFQKRFSGINGAAGN*LKASGL
Trigger: GAGCCCTGATGCTTTGAGCCAGTTCCCTGCGGCTCC...ATTTATACCACTGAAGCGTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTAGGAAAGTGTCTTTTGTaGGTGGCTCTAGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLGKCLL*VALGVT
Trigger: TGTCACCCCTAGAGCCACCCACAAAAGACACTTTCC...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACTTGGCTCAGATGAAATaGAGCTGTTACCGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYLAQMK*SCYRKP
Trigger: TGGCTTTCGGTAACAGCTCCATTTCATCTGAGCCAA...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACTGCCTGGTGAAATCCTaGAAGTCCCCACTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHCLVKS*KSPLSN
Trigger: GTTTGAAAGTGGGGACTTCCAGGATTTCACCAGGCA...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 72 bp TGCCCGACACAATGTACAGCATTGAGAACGGTAACCTaGGTTACTGTTTCCAAGGACACGGACCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: CPTQCTALRTVT*VTVSKDTDQAL
Trigger: AAGAGCCTGGTCCGTGTCCTTGGAAACAGTAACCAAGGTTACCGTTCTCAATGCTGTACATTGTGTCGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCCCTGGGAAGTCCAGATaGCATCAGAATGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLPGKSR*HQNGIK
Trigger: CTTTATCCCATTCTGATGTCATCTGGACTTCCCAGG...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACATTCCCATCATGCCTTaGATATTGGGCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHIPIMP*ILGCMT
Trigger: TGTCATGCAGCCCAATATGCAAGGCATGATGGGAAT...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAAGAAGCAGGCATCTCTTaGAAGTCAGTGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: LLLWGMERHWGPLQECTEEAGIS*KSVKES
Trigger: TGATTCCTTCACTGACTTCCAAGAGATGCCTGCTTC...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AAAGCTGAATGCAACATGAGTCATTTCAATACATGCATGCAAAGAAAATCAGCCGGTTGCCGCAGCAGGTaGGTGCTGTGCCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KAECNMSHFNTCMQRKSAGCRSR*VLCPFH
Trigger: GTGGAAGGGGCACAGCACCCACCTGCTGCGGCAACC...GGCTGATTTTCTTTGCATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AACAGATGTCATGGATACAGGCCACTGGGCAGAAAACACTTCACACAGCATTTCTCCTTGCTGTTGCATTaGAATCAGGCCTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NRCHGYRPLGRKHFTQHFSLLLH*NQALRG
Trigger: CCCCCTCAAGGCCTGATTCCAATGCAACAGCAAGGA...GAAATGCTGTGTGAAGTGTTTTCTGCCCAGTGGCCTGTATCCATGACATCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACATGTGCTAAATGTAGCTaGAAAGGGCACCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTCAKCS*KGHLFL
Trigger: GAGAAACAGGTGCCCTTTTCAGCTACATTTAGCACA...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCAATCCCTTTGAACACTaGGTATTTGTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLNPFEH*VFVCGG
Trigger: GCCTCCACAGACAAATACGCAGTGTTCAAAGGGATT...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTACATGCTGGGAATTACTaGTTTTTGAGGAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLHAGNY*FLRKQA
Trigger: TGCCTGCTTCCTCAAAAACCAGTAATTCCCAGCATG...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp CTAACTAGGAGTGGAGAAGATCTAGCTCACAGGTACTTTAACAGATGTCATGGACACTGCTGCCACCGATaGAGGGGAGGTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: LTRSGEDLAHRYFNRCHGHCCHR*RGGLKT
Trigger: AGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTG...TCCATGACATCTGTTAAAGTACCTGTGAGCTAGATCTTCTCCACTCCTAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTAACTCTTTCTGCTCAGTaGTCTGAGGCATCATGTCTT +
Preference number: 4 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLTLSAQ*SEASCL
Trigger: AAGACATGATGCCTCAGACCACTGAGCAGAAAGAGT...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACACCAGCTCCACACGCTTaGTTACGCGGTACACTTCCA +
Preference number: 4 (lower is better)
Translates to: KGKATHQLLTYRTMFHITPAPHA*LRGTLP
Trigger: TGGAAGTGTACCGCGTAACCAAGCGTGTGGAGCTGG...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp AAAGCTGAATGCAACATGAGTCATTTCAATACATGCATGCAAAGAAAATCAGCCAGCCGGGCTTGGACATaGGGTTTCTTGGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: KAECNMSHFNTCMQRKSASRAWT*GFLAAV
Trigger: GACCGCAGCCAAGAAACCTCATGTCCAAGCCCGGCT...GGCTGATTTTCTTTGCATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACACTCTTGTGTGATCCTTaGACAGAAAGGTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PQATHILTCILASAGMSTLLCDP*TERSKV
Trigger: AACCTTTGACCTTTCTGTTCAAGGATCACACAAGAG...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CCTTTGCTGCATTTGAAGTGTATGTACACACACACACACACACACACACACACAGGGTCTCATTCCGCCTaGAACAGGAAACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: PLLHLKCMYTHTHTHTHTGSHSA*NRKHEA
Trigger: AGCTTCATGTTTCCTGTTGCAGGCGGAATGAGACCC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACACTTCAAATGCAGCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGAAAGCCATAAAATCTaGAAAGTCGTCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSESHKI*KVVLLP
Trigger: GGGGAGCAGGACGACTTTGCAGATTTTATGGCTTTC...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 72 bp GGAGATAAGCAAGCAAATGTCCAGTGCCACGTGCAGTaGGGGTCTGGTAATTTTACCTCAAGTCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GDKQANVQCHVQ*GSGNFTSSLKE
Trigger: CTCTTTGAGACTTGAGGTAAAATTACCAGACCCCAACTGCACGTGGCACTGGACATTTGCTTGCTTATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 72 bp TGGCTGGACTTGGAAAGGAGGGGGCTTTTCAATTATTaGGTGTGCCCTTTCCACATAAGTGGTACCCAATCT +
Preference number: 4 (lower is better)
Translates to: WLDLERRGLFNY*VCPFHISGTQS
Trigger: AGATTGGGTACCACTTATGTGGAAAGGGCACACCAAATAATTGAAAAGCCCCCTCCTTTCCAAGTCCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 72 bp GAGCCGTTTCACATAAGCCCTATTTCTTGGCTGGACTaGGAAAGGAGGGGGCTTTTCAATTATTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: EPFHISPISWLD*ERRGLFNYLVC
Trigger: GCACACCAAATAATTGAAAAGCCCCCTCCTTTCCAAGTCCAGCCAAGAAATAGGGCTTATGTGAAACGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTTGCTTTTGGCTCAGATaGAATGGAGCTGTTACCGAA +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSCFWLR*NGAVTE
Trigger: TTCGGTAACAGCTCCATTTCATCTGAGCCAAAAGCA...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACACCTTGCATATTGGGCTaGATGACAGAGACCATAGGG +
Preference number: 4 (lower is better)
Translates to: KGKATHQLLTYRTMFHITPCILG*MTETIG
Trigger: CCCTATGGTCTCTGTCATGCAGCCCAATATGCAAGG...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CCTTTGCTGCATTTGAAGTGTATGTACACACACACACACACACACACACACACAATTGGTATTCCTGCCTaGATTGCAATCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLHLKCMYTHTHTHTHTIGIPA*IAIGPW
Trigger: CCAAGGACCGATTGCAATGCAGGCAGGAATACCAAT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACACTTCAAATGCAGCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACATGCTCTTCCGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KGKATHQLLTYRTMFHITCSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCA...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACGATTTCATTTTGCTCTaGGAATTAGCTACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYDFILL*ELATKK
Trigger: CTTCTTAGTAGCTAATTCCCAGAGCAAAATGAAATC...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTTTTGCTCGAGTTCCCTaGAAGCACTGTATTTATCAC +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSFARVP*KHCIYH
Trigger: GTGATAAATACAGTGCTTTCAGGGAACTCGAGCAAA...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTAATTCATTCCCATCATaGCTTGCATATTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSNSFPS*LAYWAA
Trigger: TGCAGCCCAATATGCAAGGCATGATGGGAATGAATT...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp GGTATGCTAACTAGCAGACTGAGACAGGGAAGCTCAGATGGTATCCATGGGCACTTTCTTATAGGCATCTaGAACCAAACTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: GMLTSRLRQGSSDGIHGHFLIGI*NQTLIV
Trigger: TACAATGAGAGTTTGGTTCCAGATGCCTATAAGAAA...GTGCCCATGGATACCATCTGAGCTTCCCTGTCTCAGTCTGCTAGTTAGCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AAAGCTGAATGCAACATGAGTCATTTCAATACATGCATGCAAAGAAAATCAGCCCTGGCTGAGGTCGAGTaGAAACGGACTTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KAECNMSHFNTCMQRKSALAEVE*KRTLLC
Trigger: GCACAGCAAAGTCCGTTTCCACTCGACCTCAGCCAG...GGCTGATTTTCTTTGCATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACAACTCCCCAAAGAGGTTaGACTCTCCAAAATCATCTG +
Preference number: 4 (lower is better)
Translates to: KGKATHQLLTYRTMFHITTPQRG*TLQNHL
Trigger: CAGATGATTTTGGAGAGTTCAACCTCTTTGGGGAGT...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR TCA 90 bp AAAGCTGAATGCAACATGAGTCATTTCAATACATGCATGCAAAGAAAATCAGCCCTTCTTTGGCATGTCTaGAAGCCACGGCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAECNMSHFNTCMQRKSALLWHV*KPRLSL
Trigger: GAGAGAAAGCCGTGGCTTTCAGACATGCCAAAGAAG...GGCTGATTTTCTTTGCATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTAAATTGAACAGAAAGTaGATCTTCAGAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSKLNRK*IFRVLL
Trigger: AAGGAGGACTCTGAAGATGCACTTTCTGTTCAATTT...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACACTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: KGKATHQLLTYRTMFHITLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp GCCTTAGAGCAGCCCTCAGTGCAAAGCAAGCATTTCCAATTTCTGTTTGAGAAAAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: ALEQPSVQSKHFQFLFEKRKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...TTTCTCAAACAGAAATTGGAAATGCTTGCTTTGCACTGAGGGCTGCTCTAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CCA 90 bp AAAGCTGAATGCAACATGAGTCATTTCAATACATGCATGCAAAGAAAATCAGCCCACTACACACAGCAGTaGCTTTTATCCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KAECNMSHFNTCMQRKSAHYTQQ*LLSPAP
Trigger: TGGAGCTGGGGATAAAAGCCACTGCTGTGTGTAGTG...GGCTGATTTTCTTTGCATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
3UTR CAA 72 bp AAATTCAGTGCTGCTAACCGTTTTCCTTTGCTGCATTaGAAGTGTATGTACACACACACACACACACACACA +
Preference number: 4 (lower is better)
Translates to: KFSAANRFPLLH*KCMYTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTACATACACTTCAAATGCAGCAAAGGAAAACGGTTAGCAGCACTGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR GCA 90 bp CTGGGCAGAAAACACTTCACACAGCATTTCCAGAAACGCTTCAGTGGTATAAATCTCTCCAAAATCATCTaGCAAACTAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LGRKHFTQHFQKRFSGINLSKII*QTRSFS
Trigger: ACTAAAACTTCTAGTTTGGCAGATGATTTTGGAGAG...ATTTATACCACTGAAGCGTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp GGAGTGTACTGTGGGCCTGCAGGACGCATGCTCAAGAAAGGTGGCTaGCCCAGGAAAGGCACACCCGCTGCTGGCATTGGCCCCATTGGT +
Preference number: 5 (lower is better)
Translates to: GVYCGPAGRMLKKGG*PRKGTPAAGIGPIG
Trigger: ACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp TCGTGCGAAGCCACACTGGAAGCCGGGCTTGGACATGAGGTTTCTTaGCTGCGGTCCACCGTGGGCATGTCCTGCCTGGTGAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: SCEATLEAGLGHEVS*LRSTVGMSCLVKSW
Trigger: CCAGGATTTCACCAGGCAGGACATGCCCACGGTGGACCGCAGCCAAGAAACCTCATGTCCAAGCCCGGCTTCCAGTGTGGCTTCGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 90 bp GCAGATCTGGCAAGAGGAGGCCGGGAGGCTTGGGTTCAACACAGTTaGTCCAGAAGTTGGCACAGCTGGCGTGGTACTGGTGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: ADLARGGREAWVQHS*SRSWHSWRGTGVLR
Trigger: ACGGAGGACACCAGTACCACGCCAGCTGTGCCAACTTCTGGATCAACTGTGTTGAACCCAAGCCTCCCGGCCTCCTCTTGCCAGATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp ACTGCTTCTGCATGTCTGGAGTGTACTGTGGGCCTGCAGGACGCATaGTCAAGAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TASACLECTVGLQDA*SRKVADPGKAHPLL
Trigger: CAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp GACAGCTGTTTGAAGACATCATACTTGGTTGCCGCAGCAGGTGGGTaGTGTGCCCCTTCCACAGTGCTGCTGGACAAGGGGCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: DSCLKTSYLVAAAGG*CAPSTVLLDKGLGL
Trigger: GAGTCCCAGCCCCTTGTCCAGCAGCACTGTGGAAGGGGCACAGCACCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAAACAGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp GGGGCTGTGGAAGAAGGCCCGCAAGCGGGAAACTCAACAGGCCCCTaGACAAAGCCACTGAATTCGTCTTCGCCGGGAAAGGCAGATGAT +
Preference number: 5 (lower is better)
Translates to: GAVEEGPQAGNSTGP*TKPLNSSSPGKADD
Trigger: ATCATCTGCCTTTCCCGGCGAAGACGAATTCAGTGGCTTTGTGCAGGGGCCTGTTGAGTTTCCCGCTTGCGGGCCTTCTTCCACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000138676.2
ENSMUST00000183456.8
CDS-3UTR CAA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTTTGGGTTCAACACAGTaGATCCAGAAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPLGSTQ*IQKLAQ
Trigger: CTGTGCCAACTTCTGGATCAACTGTGTTGAACCCAA...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS GCA 90 bp ACGCATGCTCAAGAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTaGTGGCATTGGCCCCATTGGTATTCCTGCCTGCATTGCAATCGG +
Preference number: 5 (lower is better)
Translates to: THAQERWLTQERHTR*WHWPHWYSCLHCNR
Trigger: CCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp CTGTTTGAAGACATCATACTTGGTTGCCGCAGCAGGTGGGTGCTGTaGCCCTTCCACAGTGCTGCTGGACAAGGGGCTGGGACTCACTTC +
Preference number: 5 (lower is better)
Translates to: LFEDIILGCRSRWVL*PFHSAAGQGAGTHF
Trigger: GAAGTGAGTCCCAGCCCCTTGTCCAGCAGCACTGTGGAAGGGGCACAGCACCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp CAAGAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTGCTGGCATTaGCCCCATTGGTATTCCTGCCTGCATTGCAATCGGTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: QERWLTQERHTRCWH*PHWYSCLHCNRSLG
Trigger: TCCCAAGGACCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp CATGCTCAAGAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTGCTaGCATTGGCCCCATTGGTATTCCTGCCTGCATTGCAATCGGTCC +
Preference number: 5 (lower is better)
Translates to: HAQERWLTQERHTRC*HWPHWYSCLHCNRS
Trigger: GGACCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp CTCTTCCGCAAACTGCTTCTGCATGTCTGGAGTGTACTGTGGGCCTaGAGGACGCATGCTCAAGAAAGGTGGCTGACCCAGGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: LFRKLLLHVWSVLWA*RTHAQERWLTQERH
Trigger: GTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp GTCATAGGAAAGCCGCTTAAGGTAGGGATGGGAGCCGCAGGGAACTaGCTCAAAGCATCAGGGCTCATGGCAGGAACACCCCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: VIGKPLKVGMGAAGN*LKASGLMAGTPLCV
Trigger: AACACAGAGGGGTGTTCCTGCCATGAGCCCTGATGCTTTGAGCCAGTTCCCTGCGGCTCCCATCCCTACCTTAAGCGGCTTTCCTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000138676.2
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp GGCTGGCATGAAGCCACTGGAAGTTGGTGCTGCAGCTCCACCCACTaGTCCAACAAGGTTGATACCCATGATGGGTTGTCCAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GWHEATGSWCCSSTH*SNKVDTHDGLSKGE
Trigger: CTCACCCTTGGACAACCCATCATGGGTATCAACCTTGTTGGACCAGTGGGTGGAGCTGCAGCACCAACTTCCAGTGGCTTCATGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTCAGTTGATCCAGAAGTaGGCACAGCTGGCGTGGTAC +
Preference number: 5 (lower is better)
Translates to: SHTNHRTEGKARHPNPSAQLIQK*AQLAWY
Trigger: GTACCACGCCAGCTGTGCCAACTTCTGGATCAACTG...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS GCA 90 bp GGAAGAGCGTCCTCACTGGCCAAGGCCGATCCTGCGGCAGGAGGATaGTGGCCACTAACTGTTGGTAAATCCAAAGAGCTATCAGACATG +
Preference number: 5 (lower is better)
Translates to: GRASSLAKADPAAGG*WPLTVGKSKELSDM
Trigger: CATGTCTGATAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGGATCGGCCTTGGCCAGTGAGGACGCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp GCACTGGCGGGACCACTCACACATCCATCCACAGCACCCCTGTTATaGGCCATTAAACCAGGGCAGTTCTTACTGGATCCTGGGACTATG +
Preference number: 5 (lower is better)
Translates to: ALAGPLTHPSTAPLL*AIKPGQFLLDPGTM
Trigger: CATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAATGGCCCATAACAGGGGTGCTGTGGATGGATGTGTGAGTGGTCCCGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp GGCGTGCATCGTGGATGCAGGCTCTGGGCCCTGTCATGGCAGGGAGGGTCTCCTTTGTTCAAATCGTTTTaGTTGCTCTTCCGCAAACTG +
Preference number: 5 (lower is better)
Translates to: GVHRGCRLWALSWQGGSPLFKSF*LLFRKL
Trigger: CAGTTTGCGGAAGAGCAACAAAAACGATTTGAACAA...AGGAGACCCTCCCTGCCATGACAGGGCCCAGAGCCTGCATCCACGATGCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTGAGGAAGTGTTCTCTTaGAACTCCTCCATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SHTNHRTEGKARHPNPSAEEVFS*NSSMAS
Trigger: GCTGGCCATGGAGGAGTTCAAAGAGAACACTTCCTC...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp AGTCGGCAAAGTCATCTTCACTCTTGGTGGAGGAAGTGTTCTCTTTaGACTCCTCCATGGCCAGCCCAGCGCCCTCTAGGGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SRQSHLHSWWRKCSL*TPPWPAQRPLGTAV
Trigger: AACAGCTGTCCCTAGAGGGCGCTGGGCTGGCCATGGAGGAGTTCAAAGAGAACACTTCCTCCACCAAGAGTGAAGATGACTTTGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp GCTCAAAGCATCAGGGCTCATGGCAGGAACACCCCTCTGTGTTACTaGTACCATGGCGAGAACCGTGTAAAGCTCCTCCTTAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: AQSIRAHGRNTPLCY*YHGENRVKLLLSEP
Trigger: AGGCTCACTAAGGAGGAGCTTTACACGGTTCTCGCCATGGTAGCAGTAACACAGAGGGGTGTTCCTGCCATGAGCCCTGATGCTTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000138676.2
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp TTGTTGCTCTTCCGCAAACTGCTTCTGCATGTCTGGAGTGTACTGTaGGCCTGCAGGACGCATGCTCAAGAAAGGTGGCTGACCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LLLFRKLLLHVWSVL*ACRTHAQERWLTQE
Trigger: TTCCTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp TGGACTTTTCACTTTGAAATTCTCCAAAGTCGTCTGCACCCTCCTTaGGGGTCTCGTGCGAAGCCACACTGGAAGCCGGGCTTGGACATG +
Preference number: 5 (lower is better)
Translates to: WTFHFEILQSRLHPP*GSRAKPHWKPGLDM
Trigger: CATGTCCAAGCCCGGCTTCCAGTGTGGCTTCGCACGAGACCCCCAAGGAGGGTGCAGACGACTTTGGAGAATTTCAAAGTGAAAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp AGAGCGTCCTCACTGGCCAAGGCCGATCCTGCGGCAGGAGGATGCTaGCCACTAACTGTTGGTAAATCCAAAGAGCTATCAGACATGACA +
Preference number: 5 (lower is better)
Translates to: RASSLAKADPAAGGC*PLTVGKSKELSDMT
Trigger: TGTCATGTCTGATAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGGATCGGCCTTGGCCAGTGAGGACGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTATCATGCCTTGCATATaGGGCTGCATGACAGAGACC +
Preference number: 5 (lower is better)
Translates to: SHTNHRTEGKARHPNPSAIMPCI*GCMTET
Trigger: GGTCTCTGTCATGCAGCCCAATATGCAAGGCATGAT...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGCATTCCCATCATGCCTaGCATATTGGGCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQHSHHA*HIGLHD
Trigger: GTCATGCAGCCCAATATGCAAGGCATGATGGGAATG...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACACACCCGCTGCTGGCATaGGCCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: PQATHILTCILASAGMSTHPLLA*APLVFL
Trigger: CAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTG...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGGGAAGCAGGCATCTCTaGGAAGTCAGTGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQGSRHL*EVSEGI
Trigger: GATTCCTTCACTGACTTCCAAGAGATGCCTGCTTCC...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACACCCAGCTCCACACGCTaGGTTACGCGGTACACTTCC +
Preference number: 5 (lower is better)
Translates to: PQATHILTCILASAGMSTPSSTR*VTRYTS
Trigger: GGAAGTGTACCGCGTAACCAAGCGTGTGGAGCTGGG...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCTGGGGAAGGGGAGGCCATGTGGTCACAATGCAGACAGCTTTCTGACTGTCAGCCACACCTTGTTTCTTaGGATGTGATGCTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PGEGEAMWSQCRQLSDCQPHLVS*DVMLEW
Trigger: CCACTCCAGCATCACATCCAAAGAAACAAGGTGTGG...CTGACAGTCAGAAAGCTGTCTGCATTGTGACCACATGGCCTCCCCTTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp GGAGGTCTAAAGACTTCACCGAGGAGGAGTCTTCTTTGGCATGTCTaGAAGCCACGGCTTTCTCTCCCAGGGATTTGTCTGAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GGLKTSPRRSLLWHV*KPRLSLPGICLSSW
Trigger: CCACGAGCTCAGACAAATCCCTGGGAGAGAAAGCCGTGGCTTTCAGACATGCCAAAGAAGACTCCTCCTCGGTGAAGTCTTTAGACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 90 bp GGAATTTGCCCATGGACACCATGTATGGCAAAAGACACTGGAGCCTaGGCTGGAGGCAGAGGCTGTGTCCCAACCTTCTGTGTGTGTAAC +
Preference number: 5 (lower is better)
Translates to: GICPWTPCMAKDTGA*AGGRGCVPTFCVCN
Trigger: GTTACACACACAGAAGGTTGGGACACAGCCTCTGCCTCCAGCTCAGGCTCCAGTGTCTTTTGCCATACATGGTGTCCATGGGCAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000138676.2
ENSMUST00000183456.8
CDS CCA 90 bp CTTCCTTTGACAGGGTTTGATCTGAAGTCTTTTCTGCCTCTGCACTaGCGGGACCACTCACACATCCATCCACAGCACCCCTGTTATGGG +
Preference number: 5 (lower is better)
Translates to: LPLTGFDLKSFLPLH*RDHSHIHPQHPCYG
Trigger: CCCATAACAGGGGTGCTGTGGATGGATGTGTGAGTGGTCCCGCCAGTGCAGAGGCAGAAAAGACTTCAGATCAAACCCTGTCAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp AAAGTGCATCTTCAGAGTCCTCCTTGCCAACACTGCTGCCACCGATaGAGGGGAGGTCTAAAGACTTCACCGAGGAGGAGTCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: KVHLQSPPCQHCCHR*RGGLKTSPRRSLLW
Trigger: CCAAAGAAGACTCCTCCTCGGTGAAGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp TTGTTACTCTGGGGCATGGAGAGACACTGGGGGCCATTACAAGAGTGCACTGAACTGGCATTGGCCCCATaGGTATTCCTGCCTGCATTG +
Preference number: 5 (lower is better)
Translates to: LLLWGMERHWGPLQECTELALAP*VFLPAL
Trigger: CAATGCAGGCAGGAATACCAATGGGGCCAATGCCAG...TTCAGTGCACTCTTGTAATGGCCCCCAGTGTCTCTCCATGCCCCAGAGTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTCTGAGGGCTTCATACTaGTCACTTGCTTTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SHTNHRTEGKARHPNPSALRASY*SLAFGS
Trigger: TGAGCCAAAAGCAAGTGACAAGTATGAAGCCCTCAG...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTATCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCG +
Preference number: 5 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLSSESS*PTLLPP
Trigger: CGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS GCA 90 bp ATTGAACAGAAAGTGCATCTTCAGAGTCCTCCTTGCCAACACTGCTaGCACCGATGGAGGGGAGGTCTAAAGACTTCACCGAGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: IEQKVHLQSPPCQHC*HRWRGGLKTSPRRS
Trigger: ACTCCTCCTCGGTGAAGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTGTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp CAAATTGAACAGAAAGTGCATCTTCAGAGTCCTCCTTGCCAACACTaGTGCCACCGATGGAGGGGAGGTCTAAAGACTTCACCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QIEQKVHLQSPPCQH*CHRWRGGLKTSPRR
Trigger: CCTCCTCGGTGAAGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTGTTCAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp TCATTTGCCTTCTTAATGACATCCAGCGCGCTCCCTAGGCATCTCTaGCACTCATACGCGTATCTCTCATTTTCCTCCACCTCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SFAFLMTSSALPRHL*HSYAYLSFSSTSPV
Trigger: CACTGGCGAGGTGGAGGAAAATGAGAGATACGCGTATGAGTGGCAGAGATGCCTAGGGAGCGCGCTGGATGTCATTAAGAAGGCAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp CCACAGCACCCCTGTTATGGGCCATTAAACCAGGGCAGTTCTTACTaGATCCTGGGACTATGGCTTTGTGCCCAGCATCAGGAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: PQHPCYGPLNQGSSY*ILGLWLCAQHQECL
Trigger: TAAACACTCCTGATGCTGGGCACAAAGCCATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAATGGCCCATAACAGGGGTGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp AGGCATCTGGAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGACTGAGCAGGGTCCTGAGAGGGAAACACGCCCACACCACTCT +
Preference number: 5 (lower is better)
Translates to: RHLEPNSHCKSKEAF*TEQGPERETRPHHS
Trigger: AGAGTGGTGTGGGCGTGTTTCCCTCTCAGGACCCTGCTCAGTCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTCCAGATGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp TCTCACTACACACAGCAGTGGCTTTTATCCCCAGCTCCACACGCTTaGTTACGCGGTACACTTCCACCACACCTAGAAGATACTCCATGC +
Preference number: 5 (lower is better)
Translates to: SHYTQQWLLSPAPHA*LRGTLPPHLEDTPC
Trigger: GCATGGAGTATCTTCTAGGTGTGGTGGAAGTGTACCGCGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCTGTGTGTAGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp CGATGTCCTTCAGCAACTGCTGGAGTTTCTCACTACACACAGCAGTaGCTTTTATCCCCAGCTCCACACGCTTGGTTACGCGGTACACTT +
Preference number: 5 (lower is better)
Translates to: RCPSATAGVSHYTQQ*LLSPAPHAWLRGTL
Trigger: AAGTGTACCGCGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCTGTGTGTAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp AGGCATCTGGAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGACTGAGCAGGGTCCTGAGAGGGAAACACGCCCACACCTGCTT +
Preference number: 5 (lower is better)
Translates to: RHLEPNSHCKSKEAF*TEQGPERETRPHLL
Trigger: AAGCAGGTGTGGGCGTGTTTCCCTCTCAGGACCCTGCTCAGTCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTCCAGATGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138676.2
CDS-3UTR CAA 90 bp ATGGCCACACAGGTCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCTCACTGGATTTCATTTaGCTCTGGGAATTAGCTACT +
Preference number: 5 (lower is better)
Translates to: MATQVTHQPQDRRQGTAPSLDFI*LWELAT
Trigger: AGTAGCTAATTCCCAGAGCAAAATGAAATCCAGTGA...GGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGACCTGTGTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCGTGAGATCCTTGTACTaGTCTCGGATGACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLVRSLY*SRMTGS
Trigger: GCTGCCCGTCATCCGAGACAAGTACAAGGATCTCAC...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp CTCCTGGAGTCCACATTTAAGAGACACACTCCACAAGCCAGCTCCTaGGCGTTTTTGATCCCGGGCCGTAACATACAGGAGGAAAAATCC +
Preference number: 5 (lower is better)
Translates to: LLESTFKRHTPQASS*AFLIPGRNIQEEKS
Trigger: GGATTTTTCCTCCTGTATGTTACGGCCCGGGATCAAAAACGCTCAGGAGCTGGCTTGTGGAGTGTGTCTCTTAAATGTGGACTCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp AGGCATCTGGAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGACTGAGCAGGGTCCTGAGAGGGAAACACGCCCACACCTTGTT +
Preference number: 5 (lower is better)
Translates to: RHLEPNSHCKSKEAF*TEQGPERETRPHLV
Trigger: AACAAGGTGTGGGCGTGTTTCCCTCTCAGGACCCTGCTCAGTCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTCCAGATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TGGGCACCTCGAGACCCTTCTGTCTCAAGCATGGCCACACAGGTCACACACCAAGAGAAGTCTGAGCTTTaGCTTTTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: WAPRDPSVSSMATQVTHQEKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAAAAGCAAAAGCTCAGACTTCTC...TTGGTGTGTGACCTGTGTGGCCATGCTTGAGACAGAAGGGTCTCGAGGTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACACTGGTCCAACAAGGTaGATACCCATGATGGGTTGT +
Preference number: 5 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYTGPTR*IPMMGC
Trigger: ACAACCCATCATGGGTATCAACCTTGTTGGACCAGT...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCACAGGCTACACACATCTTGACCTGCATTCTGGCATCTGCTGGAATGTCTACAATGGGAAAGTGTCTTTaGTGGGTGGCTCTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PQATHILTCILASAGMSTMGKCL*WVALGV
Trigger: CACCCCTAGAGCCACCCACAAAAGACACTTTCCCAT...TGTAGACATTCCAGCAGATGCCAGAATGCAGGTCAAGATGTGTGTAGCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TCACACACCAACCACAGGACAGAAGGCAAGGCACGGCACCCAAACCCAAGTGCTGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SHTNHRTEGKARHPNPSAVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...AGCACTTGGGTTTGGGTGCCGTGCCTTGCCTTCTGTCCTGTGGTTGGTGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp CGTCCTCACTGGCCAAGGCCGATCCTTTGGAGAGAGATGACATGGTaGTGTTTTCAGAGCTGCCAAATGAGATCTCTTTCGTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: RPHWPRPILWREMTW*CFQSCQMRSLSCEG
Trigger: ACCTTCACACGAAAGAGATCTCATTTGGCAGCTCTGAAAACATCACCATGTCATCTCTCTCCAAAGGATCGGCCTTGGCCAGTGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CCA 90 bp TTCAAATCGTTTTTGTTGCTCTTCCGCAAACTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGCAGGACGCATGCTCAAGAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: FKSFLLLFRKLLLHV*SVLWACRTHAQERW
Trigger: CCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCAACAAAAACGATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCCATTGCAATCGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLHCNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCGATTGCAATG...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTAGGGTTTTCAGAGGGCTaGTCAGTGGAAATCCCTTTG +
Preference number: 5 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLGFSEG*SVEIPL
Trigger: CAAAGGGATTTCCACTGACAAGCCCTCTGAAAACCC...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS GCA 90 bp TGTTGTTGTTCAAATCGTTTTTGTTGCTCTTCCGCAAACTGCTTCTaGATGTCTGGAGTGTACTGTGGGCCTGCAGGACGCATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: CCCSNRFCCSSANCF*MSGVYCGPAGRMLK
Trigger: CTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCAACAAAAACGATTTGAACAACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp TCTCCCAGGGATTTGTCTGAGCTCGTGGATGAGAATTTACTGGAGTaGAAGTCGGCAAAGTCATCTTCACTCTTGGTGGAGGAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: SPRDLSELVDENLLE*KSAKSSSLLVEEVF
Trigger: GAACACTTCCTCCACCAAGAGTGAAGATGACTTTGCCGACTTCCACTCCAGTAAATTCTCATCCACGAGCTCAGACAAATCCCTGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp CTTTCTCTCCCAGGGATTTGTCTGAGCTCGTGGATGAGAATTTACTaGAGTGGAAGTCGGCAAAGTCATCTTCACTCTTGGTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSLPGICLSSWMRIY*SGSRQSHLHSWWRK
Trigger: CTTCCTCCACCAAGAGTGAAGATGACTTTGCCGACTTCCACTCCAGTAAATTCTCATCCACGAGCTCAGACAAATCCCTGGGAGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp AGTGGTACCCAATCTAGACAAACCACAGGCTACACACATCTTGACCTGCATTCTGAGGAGGAGTCTTCTTaGGCATGTCTGAAAGCCACG +
Preference number: 5 (lower is better)
Translates to: SGTQSRQTTGYTHLDLHSEEESS*ACLKAT
Trigger: CGTGGCTTTCAGACATGCCAAAGAAGACTCCTCCTC...AGAATGCAGGTCAAGATGTGTGTAGCCTGTGGTTTGTCTAGATTGGGTACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CTGGGCAGAAAACACTTCACACAGCATTTCCAGAAACGCTTCAGTGGTATAAATCACTGGAAGCCGGGCTaGGACATGAGGTTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LGRKHFTQHFQKRFSGINHWKPG*DMRFLG
Trigger: GCCAAGAAACCTCATGTCCAAGCCCGGCTTCCAGTG...ATTTATACCACTGAAGCGTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CTGGGCAGAAAACACTTCACACAGCATTTCCAGAAACGCTTCAGTGGTATAAATAGGAGGCCGGGAGGCTaGGGTTCAACACAGTTGATC +
Preference number: 5 (lower is better)
Translates to: LGRKHFTQHFQKRFSGINRRPGG*GSTQLI
Trigger: GATCAACTGTGTTGAACCCAAGCCTCCCGGCCTCCT...ATTTATACCACTGAAGCGTTTCTGGAAATGCTGTGTGAAGTGTTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp GACATGGTGATGTTTTCAGAGCTGCCAAATGAGATCTCTTTCGTGTaGAGGTTTGAGGTGGCTGAAAAGGACCTACTTCCTGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: DMVMFSELPNEISFV*RFEVAEKDLLPAER
Trigger: CCTCTCAGCAGGAAGTAGGTCCTTTTCAGCCACCTCAAACCTTCACACGAAAGAGATCTCATTTGGCAGCTCTGAAAACATCACCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS TCA 90 bp CCACATTTAAGAGACACACTCCACAAGCCAGCTCCTGAGCGTTTTTaGTCCCGGGCCGTAACATACAGGAGGAAAAATCCAGTGAATTCT +
Preference number: 5 (lower is better)
Translates to: PHLRDTLHKPAPERF*SRAVTYRRKNPVNS
Trigger: AGAATTCACTGGATTTTTCCTCCTGTATGTTACGGCCCGGGATCAAAAACGCTCAGGAGCTGGCTTGTGGAGTGTGTCTCTTAAATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp AGCTTTTGTTGTTGTTCAAATCGTTTTTGTTGCTCTTCCGCAAACTaGTTCTGCATGTCTGGAGTGTACTGTGGGCCTGCAGGACGCATG +
Preference number: 5 (lower is better)
Translates to: SFCCCSNRFCCSSAN*FCMSGVYCGPAGRM
Trigger: CATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCAACAAAAACGATTTGAACAACAACAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp ATCTCCTCCCACATCAGCCAATTTCATGTCAAATTGAACAGAAAGTaGATCTTCAGAGTCCTCCTTGCCAACACTGCTGCCACCGATGGA +
Preference number: 5 (lower is better)
Translates to: ISSHISQFHVKLNRK*IFRVLLANTAATDG
Trigger: TCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTGTTCAATTTGACATGAAATTGGCTGATGTGGGAGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp CCGATTAAGTTGTTCCACACTTTATCGATGTCCTTCAGCAACTGCTaGAGTTTCTCACTACACACAGCAGTGGCTTTTATCCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PIKLFHTLSMSFSNC*SFSLHTAVAFIPSS
Trigger: GGAGCTGGGGATAAAAGCCACTGCTGTGTGTAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATAAAGTGTGGAACAACTTAATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp TGGTCACAATGCAGACAGCTTTCTGACTGTCAGGAGCTGGAGATGACGTCACCTTCTGAGCTTTTGCTTTaGCTCTTCAAACTGACGTCT +
Preference number: 5 (lower is better)
Translates to: WSQCRQLSDCQELEMTSPSELLL*LFKLTS
Trigger: AGACGTCAGTTTGAAGAGCAAAAGCAAAAGCTCAGA...AGGTGACGTCATCTCCAGCTCCTGACAGTCAGAAAGCTGTCTGCATTGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: WLLGFELWTFGRAVGCSYQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...GTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CCTTTGCTGCATTTGAAGTGTATGTACACACACACACACACACACACACACACAATCCTTGCTGTTGCATaGGAATCAGGCCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: PLLHLKCMYTHTHTHTHTILAVA*ESGLEG
Trigger: CCCCTCAAGGCCTGATTCCAATGCAACAGCAAGGAT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACACTTCAAATGCAGCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp AGCTCTCTCCTAAAGGTTTACTGTCTGTCGTTTGCTCGAGTTCCCTaGAAGCACTGTATTTATCACCAGACTCTCCAAACGAAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SSLLKVYCLSFARVP*KHCIYHQTLQTKQG
Trigger: ACCCTGCTTCGTTTGGAGAGTCTGGTGATAAATACAGTGCTTTCAGGGAACTCGAGCAAACGACAGACAGTAAACCTTTAGGAGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 90 bp GACAAATGGAGAGAGTTTTCTGCCCTGAAGTGCATCAGCCCTGTCTaGCCATTCACAGCTTGTAAGTGTGCTCACTGTAAAATGGCTACT +
Preference number: 5 (lower is better)
Translates to: DKWREFSALKCISPV*PFTACKCAHCKMAT
Trigger: AGTAGCCATTTTACAGTGAGCACACTTACAAGCTGTGAATGGTCAGACAGGGCTGATGCACTTCAGGGCAGAAAACTCTCTCCATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS GCA 90 bp ATTAAACCAGGGCAGTTCTTACTGGATCCTGGGACTATGGCTTTGTaGCCAGCATCAGGAGTGTTTAATTTTATGTGTTCCTGCCCGGAT +
Preference number: 5 (lower is better)
Translates to: IKPGQFLLDPGTMAL*PASGVFNFMCSCPD
Trigger: ATCCGGGCAGGAACACATAAAATTAAACACTCCTGATGCTGGGCACAAAGCCATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp AGCAGGGTTTTCAGAGGGCTTGTCAGTGGAAATCCCTTTGAACACTaGGTATTTGTCTGTGGAGGCTTTAGTTCCAGGAAATGGGATCAA +
Preference number: 5 (lower is better)
Translates to: SRVFRGLVSGNPFEH*VFVCGGFSSRKWDQ
Trigger: TTGATCCCATTTCCTGGAACTAAAGCCTCCACAGACAAATACGCAGTGTTCAAAGGGATTTCCACTGACAAGCCCTCTGAAAACCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp CTGAACTCGGCAAAGCTCTCTCCTAAAGGTTTACTGTCTGTCGTTTaGTCGAGTTCCCTGAAAGCACTGTATTTATCACCAGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: LNSAKLSPKGLLSVV*SSSLKALYLSPDSP
Trigger: TGGAGAGTCTGGTGATAAATACAGTGCTTTCAGGGAACTCGAGCAAACGACAGACAGTAAACCTTTAGGAGAGAGCTTTGCCGAGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp ATTTCATGTCAAATTGAACAGAAAGTGCATCTTCAGAGTCCTCCTTaGCAACACTGCTGCCACCGATGGAGGGGAGGTCTAAAGACTTCA +
Preference number: 5 (lower is better)
Translates to: ISCQIEQKVHLQSPP*QHCCHRWRGGLKTS
Trigger: TGAAGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTGTTCAATTTGACATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp AAGCCGATTAAGTTGTTCCACACTTTATCGATGTCCTTCAGCAACTaGTGGAGTTTCTCACTACACACAGCAGTGGCTTTTATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: KPIKLFHTLSMSFSN*WSFSLHTAVAFIPS
Trigger: GCTGGGGATAAAAGCCACTGCTGTGTGTAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATAAAGTGTGGAACAACTTAATCGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp GCCCTGTCTGACCATTCACAGCTTGTAAGTGTGCTCACTGTAAAATaGCTACTACAGCTTCCAAAAGCAGCACAGCTTAAGTCCTCTGTA +
Preference number: 5 (lower is better)
Translates to: ALSDHSQLVSVLTVK*LLQLPKAAQLKSSV
Trigger: TACAGAGGACTTAAGCTGTGCTGCTTTTGGAAGCTGTAGTAGCCATTTTACAGTGAGCACACTTACAAGCTGTGAATGGTCAGACAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS-3UTR CAA 90 bp AAGGGAAAAGCGACACACCAACTTTTAACATACAGGACCATGTTCCACATCACATTGAAGACATCATACTaGGTTGCCGCAGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KGKATHQLLTYRTMFHITLKTSY*VAAAGG
Trigger: CCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAA...TGTGATGTGGAACATGGTCCTGTATGTTAAAAGTTGGTGTGTCGCTTTTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp TGTCCAGTGGAGACAGCAGTGCTCTCTTTACCAGGACAGAGCATCATCGGTTTATCTAGGGACAGCTGTTaGAAGACATCATACTTGGTT +
Preference number: 5 (lower is better)
Translates to: CPVETAVLSLPGQSIIGLSRDSC*KTSYLV
Trigger: AACCAAGTATGATGTCTTCAAACAGCTGTCCCTAGA...TAAACCGATGATGCTCTGTCCTGGTAAAGAGAGCACTGCTGTCTCCACTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS-3UTR CAA 90 bp CTAACTAGGAGTGGAGAAGATCTAGCTCACAGGTACTTTAACAGATGTCATGGATCGCCAGTGAGATCCTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: LTRSGEDLAHRYFNRCHGSPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAGGATCTCACTGGCGA...TCCATGACATCTGTTAAAGTACCTGTGAGCTAGATCTTCTCCACTCCTAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp TTCCTCCCTGAGGGCTTCATACTTGTCACTTGCTTTTGGCTCAGATaGAATGGAGCTGTTACCGAAAGCCATAAAATCTGCAAAGTCGTC +
Preference number: 5 (lower is better)
Translates to: FLPEGFILVTCFWLR*NGAVTESHKICKVV
Trigger: GACGACTTTGCAGATTTTATGGCTTTCGGTAACAGCTCCATTTCATCTGAGCCAAAAGCAAGTGACAAGTATGAAGCCCTCAGGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 90 bp TTAGTTCCAGGAAATGGGATCAAGAGTGATGGAGCACTGTTTCCATaGTGGGAATTACTGGTTTTTGAGGAAGCAGGCATCTCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVPGNGIKSDGALFP*WELLVFEEAGISWK
Trigger: CTTCCAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCCCAGCATGGAAACAGTGCTCCATCACTCTTGATCCCATTTCCTGGAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 90 bp TATGGGCCATTAAACCAGGGCAGTTCTTACTGGATCCTGGGACTATaGCTTTGTGCCCAGCATCAGGAGTGTTTAATTTTATGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: YGPLNQGSSYWILGL*LCAQHQECLILCVP
Trigger: AGGAACACATAAAATTAAACACTCCTGATGCTGGGCACAAAGCCATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAATGGCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp CCTAGCTTGGGGATAATACACAAGGTACAAGAAGGAAGAGCACAGAGACCCCTCATGAAGCCGATTAAGTaGTTCCACACTTTATCGATG +
Preference number: 5 (lower is better)
Translates to: PSLGIIHKVQEGRAQRPLMKPIK*FHTLSM
Trigger: CATCGATAAAGTGTGGAACAACTTAATCGGCTTCAT...GAGGGGTCTCTGTGCTCTTCCTTCTTGTACCTTGTGTATTATCCCCAAGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS CCA 90 bp TTTCCATGCTGGGAATTACTGGTTTTTGAGGAAGCAGGCATCTCTTaGAAGTCAGTGAAGGAATCATCGATGGATCCTGATTTCGAAGCA +
Preference number: 5 (lower is better)
Translates to: FPCWELLVFEEAGIS*KSVKESSMDPDFEA
Trigger: TGCTTCGAAATCAGGATCCATCGATGATTCCTTCACTGACTTCCAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCCCAGCATGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp CCTTTGCTGCATTTGAAGTGTATGTACACACACACACACACACACACACACACAACTTGTCACTTGCTTTaGGCTCAGATGAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: PLLHLKCMYTHTHTHTHTTCHLL*AQMKWS
Trigger: GCTCCATTTCATCTGAGCCAAAAGCAAGTGACAAGT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACACTTCAAATGCAGCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS TCA 90 bp AGCAGGCATCTCTTGGAAGTCAGTGAAGGAATCATCGATGGATCCTaGTTTCGAAGCATCTTGAAAATCCTGGAAGTCATCTTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SRHLLEVSEGIIDGS*FRSILKILEVIFFC
Trigger: ACAGAAGAAGATGACTTCCAGGATTTTCAAGATGCTTCGAAATCAGGATCCATCGATGATTCCTTCACTGACTTCCAAGAGATGCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 90 bp AAGTCAGTGAAGGAATCATCGATGGATCCTGATTTCGAAGCATCTTaGAAATCCTGGAAGTCATCTTCTTCTGTCTTTCCCACCTGGTTT +
Preference number: 5 (lower is better)
Translates to: KSVKESSMDPDFEAS*KSWKSSSSVFPTWF
Trigger: AAACCAGGTGGGAAAGACAGAAGAAGATGACTTCCAGGATTTTCAAGATGCTTCGAAATCAGGATCCATCGATGATTCCTTCACTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 90 bp GGGAATTACTGGTTTTTGAGGAAGCAGGCATCTCTTGGAAGTCAGTaGAGGAATCATCGATGGATCCTGATTTCGAAGCATCTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: GNYWFLRKQASLGSQ*RNHRWILISKHLEN
Trigger: ATTTTCAAGATGCTTCGAAATCAGGATCCATCGATGATTCCTTCACTGACTTCCAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS-3UTR CAA 90 bp AAAGCTGAATGCAACATGAGTCATTTCAATACATGCATGCAAAGAAAATCAGCCTTTACTGTCTGTCGTTaGCTCGAGTTCCCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: KAECNMSHFNTCMQRKSAFTVCR*LEFPES
Trigger: GCTTTCAGGGAACTCGAGCAAACGACAGACAGTAAA...GGCTGATTTTCTTTGCATGCATGTATTGAAATGACTCATGTTGCATTCAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092834.12
CDS GCA 72 bp TCTCATTCCGCCTGCAACAGGAAACATGAAGCTGCCTaGCCCGCCGGGCCCCGCGCCCGCCCCCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: SHSACNRKHEAA*PAGPRARPRRA
Trigger: GGCGCGGCGGGGGCGGGCGCGGGGCCCGGCGGGGCAGGCAGCTTCATGTTTCCTGTTGCAGGCGGAATGAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TTGCCGCAGCAGGTGGGTGCTGTGCCCCTTCCACAGTaGTGCTGGACAAGGGGCTGGGACTCACTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPQQVGAVPLPQ*CWTRGWDSLPP
Trigger: GGGAGGAAGTGAGTCCCAGCCCCTTGTCCAGCAGCACTGTGGAAGGGGCACAGCACCCACCTGCTGCGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GCCACACTGGAAGCCGGGCTTGGACATGAGGTTTCTTaGCTGCGGTCCACCGTGGGCATGTCCTGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: ATLEAGLGHEVS*LRSTVGMSCLV
Trigger: CACCAGGCAGGACATGCCCACGGTGGACCGCAGCCAAGAAACCTCATGTCCAAGCCCGGCTTCCAGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp TGGGGGTCTCGTGCGAAGCCACACTGGAAGCCGGGCTaGGACATGAGGTTTCTTGGCTGCGGTCCACCGTGG +
Preference number: 6 (lower is better)
Translates to: WGSRAKPHWKPG*DMRFLGCGPPW
Trigger: CCACGGTGGACCGCAGCCAAGAAACCTCATGTCCAAGCCCGGCTTCCAGTGTGGCTTCGCACGAGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp CACCCTCCTTGGGGGTCTCGTGCGAAGCCACACTGGAAGCCGGGCTaGGACATGAGGTTTCTTGGCTGCGGTCCACCGTGGGCATGTCCT +
Preference number: 6 (lower is better)
Translates to: HPPWGSRAKPHWKPG*DMRFLGCGPPWACP
Trigger: AGGACATGCCCACGGTGGACCGCAGCCAAGAAACCTCATGTCCAAGCCCGGCTTCCAGTGTGGCTTCGCACGAGACCCCCAAGGAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TACTTGTCTCGGATGACGGGCAGCGCAGCCCTCTCACTCAGAGTGTaGGACCGGTCTCTGAAGGGCTGCTCCAGGGCCGGGGAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: YLSRMTGSAALSLRV*DRSLKGCSRAGEGE
Trigger: CTCTCCTTCCCCGGCCCTGGAGCAGCCCTTCAGAGACCGGTCCAACACTCTGAGTGAGAGGGCTGCGCTGCCCGTCATCCGAGACAAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp TGTGGGCCTGCAGGACGCATGCTCAAGAAAGGTGGCTaGCCCAGGAAAGGCACACCCGCTGCTGGCATTGGC +
Preference number: 6 (lower is better)
Translates to: CGPAGRMLKKGG*PRKGTPAAGIG
Trigger: GCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TGGAATCAGGCCTGCTTGAGGGGGTCTCATTCCGCCTaGAACAGGAAACATGAAGCTGCCTGCCCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: WNQACLRGSHSA*NRKHEAACPAG
Trigger: CCCGGCGGGGCAGGCAGCTTCATGTTTCCTGTTGCAGGCGGAATGAGACCCCCTCAAGCAGGCCTGATTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS GCA 72 bp GACATCATACTTGGTTGCCGCAGCAGGTGGGTGCTGTaGCCCTTCCACAGTGCTGCTGGACAAGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: DIILGCRSRWVL*PFHSAAGQGAG
Trigger: CCCAGCCCCTTGTCCAGCAGCACTGTGGAAGGGGCACAGCACCCACCTGCTGCGGCAACCAAGTATGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp ATGGAGCCTGTAGGGCCAGAGGGCATCGCCGTTGGCTaGCTCACTGGGGTAGGCAGAGTCATAGGAAAGCCG +
Preference number: 6 (lower is better)
Translates to: MEPVGPEGIAVG*LTGVGRVIGKP
Trigger: CGGCTTTCCTATGACTCTGCCTACCCCAGTGAGCCAGCCAACGGCGATGCCCTCTGGCCCTACAGGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000138676.2
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TCTCCAAAGTCGTCTGCACCCTCCTTGGGGGTCTCGTaGGAAGCCACACTGGAAGCCGGGCTTGGACATGAG +
Preference number: 6 (lower is better)
Translates to: SPKSSAPSLGVS*EATLEAGLGHE
Trigger: CTCATGTCCAAGCCCGGCTTCCAGTGTGGCTTCGCACGAGACCCCCAAGGAGGGTGCAGACGACTTTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp CATTGGAATCAGGCCTTGAGGGGGTCTCATTCCGCCTaGAACAGGAAACATGAAGCTGCCTGCCCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: HWNQALRGSHSA*NRKHEAACPAG
Trigger: CCCGGCGGGGCAGGCAGCTTCATGTTTCCTGTTGCAGGCGGAATGAGACCCCCTCAAGGCCTGATTCCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp TGGCTGACCCAGGAAAGGCACACCCGCTGCTGGCATTaGCCCCATTGGTATTCCTGCCTGCATTGCAATCGG +
Preference number: 6 (lower is better)
Translates to: WLTQERHTRCWH*PHWYSCLHCNR
Trigger: CCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTGCTaGCATTGGCCCCATTGGTATTCCTGCCTGCATTGC +
Preference number: 6 (lower is better)
Translates to: ERWLTQERHTRC*HWPHWYSCLHC
Trigger: GCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp AAGCCGCTTAAGGTAGGGATGGGAGCCGCAGGGAACTaGCTCAAAGCATCAGGGCTCATGGCAGGAACACCC +
Preference number: 6 (lower is better)
Translates to: KPLKVGMGAAGN*LKASGLMAGTP
Trigger: GGGTGTTCCTGCCATGAGCCCTGATGCTTTGAGCCAGTTCCCTGCGGCTCCCATCCCTACCTTAAGCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000138676.2
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp CCAGGAAAGGCACACCCGCTGCTGGCATTGGCCCCATaGGTATTCCTGCCTGCATTGCAATCGGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: PGKAHPLLALAP*VFLPALQSVLG
Trigger: CCCAAGGACCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GTGGCTGACCCAGGAAAGGCACACCCGCTGCTGGCATaGGCCCCATTGGTATTCCTGCCTGCATTGCAATCG +
Preference number: 6 (lower is better)
Translates to: VADPGKAHPLLA*APLVFLPALQS
Trigger: CGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GCGCCCTCTAGGGACAGCTGTTTGAAGACATCATACTaGGTTGCCGCAGCAGGTGGGTGCTGTGCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: APSRDSCLKTSY*VAAAGGCCAPS
Trigger: GGAAGGGGCACAGCACCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAAACAGCTGTCCCTAGAGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp TCCATGGCCAGCCCAGCGCCCTCTAGGGACAGCTGTTaGAAGACATCATACTTGGTTGCCGCAGCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SMASPAPSRDSC*KTSYLVAAAGG
Trigger: CCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAAACAGCTGTCCCTAGAGGGCGCTGGGCTGGCCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TTGAACTCCTCCATGGCCAGCCCAGCGCCCTCTAGGGACAGCTGTTaGAAGACATCATACTTGGTTGCCGCAGCAGGTGGGTGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LNSSMASPAPSRDSC*KTSYLVAAAGGCCA
Trigger: GGCACAGCACCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAAACAGCTGTCCCTAGAGGGCGCTGGGCTGGCCATGGAGGAGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp AGCAGATCTGGCAAGAGGAGGCCGGGAGGCTTGGGTTCAACACAGTaGATCCAGAAGTTGGCACAGCTGGCGTGGTACTGGTGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: SRSGKRRPGGLGSTQ*IQKLAQLAWYWCPP
Trigger: CGGAGGACACCAGTACCACGCCAGCTGTGCCAACTTCTGGATCAACTGTGTTGAACCCAAGCCTCCCGGCCTCCTCTTGCCAGATCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TCAAGAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTGCTGGCATaGGCCCCATTGGTATTCCTGCCTGCATTGCAATCGGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: SRKVADPGKAHPLLA*APLVFLPALQSVLG
Trigger: CCCAAGGACCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp CCACTGGAAGTTGGTGCTGCAGCTCCACCCACTGGTCCAACAAGGTaGATACCCATGATGGGTTGTCCAAGGGTGAGGGGCATGGAGCCT +
Preference number: 6 (lower is better)
Translates to: PLEVGAAAPPTGPTR*IPMMGCPRVRGMEP
Trigger: AGGCTCCATGCCCCTCACCCTTGGACAACCCATCATGGGTATCAACCTTGTTGGACCAGTGGGTGGAGCTGCAGCACCAACTTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp CAAGAAAGGTGGCTGACCCAGGAAAGGCACACCCGCTaGTGGCATTGGCCCCATTGGTATTCCTGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: QERWLTQERHTR*WHWPHWYSCLH
Trigger: ATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTGGGTCAGCCACCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp GCATGTCTGGAGTGTACTGTGGGCCTGCAGGACGCATaGTCAAGAAAGGTGGCTGACCCAGGAAAGGCACAC +
Preference number: 6 (lower is better)
Translates to: ACLECTVGLQDA*SRKVADPGKAH
Trigger: GTGTGCCTTTCCTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp GAAGAAGGCCCGCAAGCGGGAAACTCAACAGGCCCCTaGACAAAGCCACTGAATTCGTCTTCGCCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: EEGPQAGNSTGP*TKPLNSSSPGK
Trigger: CTTTCCCGGCGAAGACGAATTCAGTGGCTTTGTGCAGGGGCCTGTTGAGTTTCCCGCTTGCGGGCCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000138676.2
ENSMUST00000183456.8
CDS CCA 72 bp CAGGAAAGGCACACCCGCTGCTGGCATTGGCCCCATTaGTATTCCTGCCTGCATTGCAATCGGTCCTTGGGA +
Preference number: 6 (lower is better)
Translates to: QERHTRCWHWPH*YSCLHCNRSLG
Trigger: TCCCAAGGACCGATTGCAATGCAGGCAGGAATACCAATGGGGCCAATGCCAGCAGCGGGTGTGCCTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CACTTTGAAATTCTCCAAAGTCGTCTGCACCCTCCTTaGGGGTCTCGTGCGAAGCCACACTGGAAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: HFEILQSRLHPP*GSRAKPHWKPG
Trigger: GCCCGGCTTCCAGTGTGGCTTCGCACGAGACCCCCAAGGAGGGTGCAGACGACTTTGGAGAATTTCAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GTTGGTGCTGCAGCTCCACCCACTGGTCCAACAAGGTaGATACCCATGATGGGTTGTCCAAGGGTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: VGAAAPPTGPTR*IPMMGCPRVRG
Trigger: GCCCCTCACCCTTGGACAACCCATCATGGGTATCAACCTTGTTGGACCAGTGGGTGGAGCTGCAGCACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp AAGCGGGAAACTCAACAGGCCCCTGCACAAAGCCACTaGATTCGTCTTCGCCGGGAAAGGCAGATGATGGGG +
Preference number: 6 (lower is better)
Translates to: KRETQQAPAQSH*IRLRRERQMMG
Trigger: CCCCATCATCTGCCTTTCCCGGCGAAGACGAATTCAGTGGCTTTGTGCAGGGGCCTGTTGAGTTTCCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000138676.2
ENSMUST00000183456.8
CDS CCA 72 bp CTTCAGAGTCCTCCTTGCCAACACTGCTGCCACCGATaGAGGGGAGGTCTAAAGACTTCACCGAGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: LQSPPCQHCCHR*RGGLKTSPRRS
Trigger: ACTCCTCCTCGGTGAAGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp TCATTTTCCTCCACCTCGCCAGTGAGATCCTTGTACTaGTCTCGGATGACGGGCAGCGCAGCCCTCTCACTC +
Preference number: 6 (lower is better)
Translates to: SFSSTSPVRSLY*SRMTGSAALSL
Trigger: GAGTGAGAGGGCTGCGCTGCCCGTCATCCGAGACAAGTACAAGGATCTCACTGGCGAGGTGGAGGAAAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp GAGCAGGGTCCTGAGAGGGAAACACGCCCACACCACTCTCTTCCTTaGACAGGGTTTGATCTGAAGTCTTTTCTGCCTCTGCACTGGCGG +
Preference number: 6 (lower is better)
Translates to: EQGPERETRPHHSLP*TGFDLKSFLPLHWR
Trigger: CCGCCAGTGCAGAGGCAGAAAAGACTTCAGATCAAACCCTGTCAAAGGAAGAGAGTGGTGTGGGCGTGTTTCCCTCTCAGGACCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp GCGTATCTCTCATTTTCCTCCACCTCGCCAGTGAGATCCTTGTACTaGTCTCGGATGACGGGCAGCGCAGCCCTCTCACTCAGAGTGTTG +
Preference number: 6 (lower is better)
Translates to: AYLSFSSTSPVRSLY*SRMTGSAALSLRVL
Trigger: CAACACTCTGAGTGAGAGGGCTGCGCTGCCCGTCATCCGAGACAAGTACAAGGATCTCACTGGCGAGGTGGAGGAAAATGAGAGATACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp CTTGGCTGCGGTCCACCGTGGGCATGTCCTGCCTGGTaGAATCCTGGAAGTCCCCACTTTCAAACTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LGCGPPWACPAW*NPGSPHFQTLS
Trigger: AGAAAGAGTTTGAAAGTGGGGACTTCCAGGATTTCACCAGGCAGGACATGCCCACGGTGGACCGCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp AAACTGCTTCTGCATGTCTGGAGTGTACTGTGGGCCTaGAGGACGCATGCTCAAGAAAGGTGGCTGACCCAG +
Preference number: 6 (lower is better)
Translates to: KLLLHVWSVLWA*RTHAQERWLTQ
Trigger: CTGGGTCAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TCCTCACTGGCCAAGGCCGATCCTGCGGCAGGAGGATaGTGGCCACTAACTGTTGGTAAATCCAAAGAGCTA +
Preference number: 6 (lower is better)
Translates to: SSLAKADPAAGG*WPLTVGKSKEL
Trigger: TAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGGATCGGCCTTGGCCAGTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp TTCCGCAAACTGCTTCTGCATGTCTGGAGTGTACTGTaGGCCTGCAGGACGCATGCTCAAGAAAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: FRKLLLHVWSVL*ACRTHAQERWL
Trigger: CAGCCACCTTTCTTGAGCATGCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CTGTTTGAAGACATCATACTTGGTTGCCGCAGCAGGTaGGTGCTGTGCCCCTTCCACAGTGCTGCTGGACAA +
Preference number: 6 (lower is better)
Translates to: LFEDIILGCRSR*VLCPFHSAAGQ
Trigger: TTGTCCAGCAGCACTGTGGAAGGGGCACAGCACCCACCTGCTGCGGCAACCAAGTATGATGTCTTCAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CGGTCCACCGTGGGCATGTCCTGCCTGGTGAAATCCTaGAAGTCCCCACTTTCAAACTCTTTCTGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: RSTVGMSCLVKS*KSPLSNSFCSV
Trigger: CACTGAGCAGAAAGAGTTTGAAAGTGGGGACTTCCAGGATTTCACCAGGCAGGACATGCCCACGGTGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GTGGGTGGCTCTAGGGGTGACACACTATCGGCGGTCTaGAAGTCAGTGAAGCCATCATCGGTTCCTGTGGAT +
Preference number: 6 (lower is better)
Translates to: VGGSRGDTLSAV*KSVKPSSVPVD
Trigger: ATCCACAGGAACCGATGATGGCTTCACTGACTTCAAGACCGCCGATAGTGTGTCACCCCTAGAGCCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp TATCTCTCATTTTCCTCCACCTCGCCAGTGAGATCCTaGTACTTGTCTCGGATGACGGGCAGCGCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: YLSFSSTSPVRS*YLSRMTGSAAL
Trigger: GAGGGCTGCGCTGCCCGTCATCCGAGACAAGTACAAGGATCTCACTGGCGAGGTGGAGGAAAATGAGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp AAGTCGGCAAAGTCATCTTCACTCTTGGTGGAGGAAGTGTTCTCTTaGAACTCCTCCATGGCCAGCCCAGCGCCCTCTAGGGACAGCTGT +
Preference number: 6 (lower is better)
Translates to: KSAKSSSLLVEEVFS*NSSMASPAPSRDSC
Trigger: ACAGCTGTCCCTAGAGGGCGCTGGGCTGGCCATGGAGGAGTTCAAAGAGAACACTTCCTCCACCAAGAGTGAAGATGACTTTGCCGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TCATACGCGTATCTCTCATTTTCCTCCACCTCGCCAGTGAGATCCTaGTACTTGTCTCGGATGACGGGCAGCGCAGCCCTCTCACTCAGA +
Preference number: 6 (lower is better)
Translates to: SYAYLSFSSTSPVRS*YLSRMTGSAALSLR
Trigger: TCTGAGTGAGAGGGCTGCGCTGCCCGTCATCCGAGACAAGTACAAGGATCTCACTGGCGAGGTGGAGGAAAATGAGAGATACGCGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp TCACTGGCCAAGGCCGATCCTGCGGCAGGAGGATGCTaGCCACTAACTGTTGGTAAATCCAAAGAGCTATCA +
Preference number: 6 (lower is better)
Translates to: SLAKADPAAGGC*PLTVGKSKELS
Trigger: TGATAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGGATCGGCCTTGGCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp AATTTGCCCATGGACACCATGTATGGCAAAAGACACTaGAGCCTGAGCTGGAGGCAGAGGCTGTGTCCCAAC +
Preference number: 6 (lower is better)
Translates to: NLPMDTMYGKRH*SLSWRQRLCPN
Trigger: GTTGGGACACAGCCTCTGCCTCCAGCTCAGGCTCCAGTGTCTTTTGCCATACATGGTGTCCATGGGCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000138676.2
ENSMUST00000183456.8
CDS CAA 72 bp GGGCTGCATGACAGAGACCATAGGGAATCCTTGCTGTaGCATTGGAATCAGGCCTGCTTGAGGGGGTCTCAT +
Preference number: 6 (lower is better)
Translates to: GLHDRDHRESLL*HWNQACLRGSH
Trigger: ATGAGACCCCCTCAAGCAGGCCTGATTCCAATGCAACAGCAAGGATTCCCTATGGTCTCTGTCATGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CAA 72 bp AAGTCATCTTCACTCTTGGTGGAGGAAGTGTTCTCTTaGAACTCCTCCATGGCCAGCCCAGCGCCCTCTAGG +
Preference number: 6 (lower is better)
Translates to: KSSSLLVEEVFS*NSSMASPAPSR
Trigger: CCTAGAGGGCGCTGGGCTGGCCATGGAGGAGTTCAAAGAGAACACTTCCTCCACCAAGAGTGAAGATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GGGAGGTCTAAAGACTTCACCGAGGAGGAGTCTTCTTaGGCATGTCTGAAAGCCACGGCTTTCTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: GRSKDFTEEESS*ACLKATAFSPR
Trigger: CCTGGGAGAGAAAGCCGTGGCTTTCAGACATGCCAAAGAAGACTCCTCCTCGGTGAAGTCTTTAGACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp CACACAGCAGTGGCTTTTATCCCCAGCTCCACACGCTaGGTTACGCGGTACACTTCCACCACACCTAGAAGA +
Preference number: 6 (lower is better)
Translates to: HTAVAFIPSSTR*VTRYTSTTPRR
Trigger: TCTTCTAGGTGTGGTGGAAGTGTACCGCGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GGGCTGCATGACAGAGACCATAGGGAATCCTTGCTGTaGCATTGGAATCAGGCCTTGAGGGGGTCTCATTCC +
Preference number: 6 (lower is better)
Translates to: GLHDRDHRESLL*HWNQALRGSHS
Trigger: GGAATGAGACCCCCTCAAGGCCTGATTCCAATGCAACAGCAAGGATTCCCTATGGTCTCTGTCATGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TTGCATATTGGGCTGCATGACAGAGACCATAGGGAATCCTTGCTGTaGCATTGGAATCAGGCCTGCTTGAGGGGGTCTCATTCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: LHIGLHDRDHRESLL*HWNQACLRGSHSAC
Trigger: GCAGGCGGAATGAGACCCCCTCAAGCAGGCCTGATTCCAATGCAACAGCAAGGATTCCCTATGGTCTCTGTCATGCAGCCCAATATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CAA 90 bp GTGTCTTTTGTGGGTGGCTCTAGGGGTGACACACTATCGGCGGTCTaGAAGTCAGTGAAGCCATCATCGGTTCCTGTGGATCTGAACTCG +
Preference number: 6 (lower is better)
Translates to: VSFVGGSRGDTLSAV*KSVKPSSVPVDLNS
Trigger: CGAGTTCAGATCCACAGGAACCGATGATGGCTTCACTGACTTCAAGACCGCCGATAGTGTGTCACCCCTAGAGCCACCCACAAAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp CCGATGGAGGGGAGGTCTAAAGACTTCACCGAGGAGGAGTCTTCTTaGGCATGTCTGAAAGCCACGGCTTTCTCTCCCAGGGATTTGTCT +
Preference number: 6 (lower is better)
Translates to: PMEGRSKDFTEEESS*ACLKATAFSPRDLS
Trigger: AGACAAATCCCTGGGAGAGAAAGCCGTGGCTTTCAGACATGCCAAAGAAGACTCCTCCTCGGTGAAGTCTTTAGACCTCCCCTCCATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp CAGAAAGTGCATCTTCAGAGTCCTCCTTGCCAACACTaGTGCCACCGATGGAGGGGAGGTCTAAAGACTTCA +
Preference number: 6 (lower is better)
Translates to: QKVHLQSPPCQH*CHRWRGGLKTS
Trigger: TGAAGTCTTTAGACCTCCCCTCCATCGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CCCTGTTATGGGCCATTAAACCAGGGCAGTTCTTACTaGATCCTGGGACTATGGCTTTGTGCCCAGCATCAG +
Preference number: 6 (lower is better)
Translates to: PCYGPLNQGSSY*ILGLWLCAQHQ
Trigger: CTGATGCTGGGCACAAAGCCATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAATGGCCCATAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GGACCACTCACACATCCATCCACAGCACCCCTGTTATaGGCCATTAAACCAGGGCAGTTCTTACTGGATCCT +
Preference number: 6 (lower is better)
Translates to: GPLTHPSTAPLL*AIKPGQFLLDP
Trigger: AGGATCCAGTAAGAACTGCCCTGGTTTAATGGCCCATAACAGGGGTGCTGTGGATGGATGTGTGAGTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp ACACAGCAGTGGCTTTTATCCCCAGCTCCACACGCTTaGTTACGCGGTACACTTCCACCACACCTAGAAGAT +
Preference number: 6 (lower is better)
Translates to: TQQWLLSPAPHA*LRGTLPPHLED
Trigger: ATCTTCTAGGTGTGGTGGAAGTGTACCGCGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp TCAGCAACTGCTGGAGTTTCTCACTACACACAGCAGTaGCTTTTATCCCCAGCTCCACACGCTTGGTTACGC +
Preference number: 6 (lower is better)
Translates to: SATAGVSHYTQQ*LLSPAPHAWLR
Trigger: GCGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCTGTGTGTAGTGAGAAACTCCAGCAGTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GGGCTGGGACTCACTTCCTCCCTGAGGGCTTCATACTaGTCACTTGCTTTTGGCTCAGATGAAATGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GLGLTSSLRASY*SLAFGSDEMEL
Trigger: CAGCTCCATTTCATCTGAGCCAAAAGCAAGTGACAAGTATGAAGCCCTCAGGGAGGAAGTGAGTCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp AAGGCAGTCTCTGGAAGAGCGTCCTCACTGGCCAAGGCCGATCCTTaGGAGAGAGATGACATGGTGATGTTTTCAGAGCTGCCAAATGAG +
Preference number: 6 (lower is better)
Translates to: KAVSGRASSLAKADP*ERDDMVMFSELPNE
Trigger: CTCATTTGGCAGCTCTGAAAACATCACCATGTCATCTCTCTCCAAAGGATCGGCCTTGGCCAGTGAGGACGCTCTTCCAGAGACTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CAA 90 bp CTGGACAAGGGGCTGGGACTCACTTCCTCCCTGAGGGCTTCATACTaGTCACTTGCTTTTGGCTCAGATGAAATGGAGCTGTTACCGAAA +
Preference number: 6 (lower is better)
Translates to: LDKGLGLTSSLRASY*SLAFGSDEMELLPK
Trigger: TTTCGGTAACAGCTCCATTTCATCTGAGCCAAAAGCAAGTGACAAGTATGAAGCCCTCAGGGAGGAAGTGAGTCCCAGCCCCTTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TTCTCACTACACACAGCAGTGGCTTTTATCCCCAGCTCCACACGCTaGGTTACGCGGTACACTTCCACCACACCTAGAAGATACTCCATG +
Preference number: 6 (lower is better)
Translates to: FSLHTAVAFIPSSTR*VTRYTSTTPRRYSM
Trigger: CATGGAGTATCTTCTAGGTGTGGTGGAAGTGTACCGCGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCTGTGTGTAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp AAGACTTCACCGAGGAGGAGTCTTCTTTGGCATGTCTaGAAGCCACGGCTTTCTCTCCCAGGGATTTGTCTG +
Preference number: 6 (lower is better)
Translates to: KTSPRRSLLWHV*KPRLSLPGICL
Trigger: CAGACAAATCCCTGGGAGAGAAAGCCGTGGCTTTCAGACATGCCAAAGAAGACTCCTCCTCGGTGAAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp CCTGCTGAGAGGACAAATGGAGAGAGTTTTCTGCCCTaGAGTGCATCAGCCCTGTCTGACCATTCACAGCTT +
Preference number: 6 (lower is better)
Translates to: PAERTNGESFLP*SASALSDHSQL
Trigger: AAGCTGTGAATGGTCAGACAGGGCTGATGCACTTCAGGGCAGAAAACTCTCTCCATTTGTCCTCTCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS TCA 72 bp AGAGACACACTCCACAAGCCAGCTCCTGAGCGTTTTTaGTCCCGGGCCGTAACATACAGGAGGAAAAATCCA +
Preference number: 6 (lower is better)
Translates to: RDTLHKPAPERF*SRAVTYRRKNP
Trigger: TGGATTTTTCCTCCTGTATGTTACGGCCCGGGATCAAAAACGCTCAGGAGCTGGCTTGTGGAGTGTGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp TCCACATTTAAGAGACACACTCCACAAGCCAGCTCCTaGGCGTTTTTGATCCCGGGCCGTAACATACAGGAG +
Preference number: 6 (lower is better)
Translates to: STFKRHTPQASS*AFLIPGRNIQE
Trigger: CTCCTGTATGTTACGGCCCGGGATCAAAAACGCTCAGGAGCTGGCTTGTGGAGTGTGTCTCTTAAATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TCAAATCGTTTTTGTTGCTCTTCCGCAAACTGCTTCTaGATGTCTGGAGTGTACTGTGGGCCTGCAGGACGC +
Preference number: 6 (lower is better)
Translates to: SNRFCCSSANCF*MSGVYCGPAGR
Trigger: GCGTCCTGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCAACAAAAACGATTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TTCTTAATGACATCCAGCGCGCTCCCTAGGCATCTCTaGCACTCATACGCGTATCTCTCATTTTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: FLMTSSALPRHL*HSYAYLSFSST
Trigger: GGTGGAGGAAAATGAGAGATACGCGTATGAGTGGCAGAGATGCCTAGGGAGCGCGCTGGATGTCATTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGACTGAGCAGGGTCCTGAGAGGGAAACACGCCCA +
Preference number: 6 (lower is better)
Translates to: EPNSHCKSKEAF*TEQGPERETRP
Trigger: TGGGCGTGTTTCCCTCTCAGGACCCTGCTCAGTCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000138676.2
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CCACGGCTTTCTCTCCCAGGGATTTGTCTGAGCTCGTaGATGAGAATTTACTGGAGTGGAAGTCGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: PRLSLPGICLSS*MRIYWSGSRQS
Trigger: ACTTTGCCGACTTCCACTCCAGTAAATTCTCATCCACGAGCTCAGACAAATCCCTGGGAGAGAAAGCCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GAGGGAAACACGCCCACACCTGCTTTCTGCACACTGTaGGAAGCTGAAGCAGCAGATAAACAAGGAATTTGC +
Preference number: 6 (lower is better)
Translates to: EGNTPTPAFCTL*EAEAADKQGIC
Trigger: GCAAATTCCTTGTTTATCTGCTGCTTCAGCTTCCCACAGTGTGCAGAAAGCAGGTGTGGGCGTGTTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138676.2
CDS CAA 90 bp CGGTCCTTGGGACATCTGAGAGCTGTAATTCATTCCCATCATGCCTaGCATATTGGGCTGCATGACAGAGACCATAGGGAATCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RSLGHLRAVIHSHHA*HIGLHDRDHRESLL
Trigger: CAGCAAGGATTCCCTATGGTCTCTGTCATGCAGCCCAATATGCAAGGCATGATGGGAATGAATTACAGCTCTCAGATGTCCCAAGGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp CTTCTCTTCCAAGGAAGGGCCTTGTTTCTTTGGATGTaGTGCTGGAGTGGGGTGCATCTTAGCATCTCTGGA +
Preference number: 6 (lower is better)
Translates to: LLFQGRALFLWM*CWSGVHLSISG
Trigger: TCCAGAGATGCTAAGATGCACCCCACTCCAGCATCACATCCAAAGAAACAAGGCCCTTCCTTGGAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049714.15
ENSMUST00000183714.8
CDS GCA 72 bp GCACAGCTTAAGTCCTCTGTATCTGCGGCAGGAGGATaGTGGCCACTAACTGTTGGTAAATCCAAAGAGCTA +
Preference number: 6 (lower is better)
Translates to: AQLKSSVSAAGG*WPLTVGKSKEL
Trigger: TAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGATACAGAGGACTTAAGCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CAA 90 bp GCCATTAAACCAGGGCAGTTCTTACTGGATCCTGGGACTATGGCTTaGTGCCCAGCATCAGGAGTGTTTAATTTTATGTGTTCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: AIKPGQFLLDPGTMA*CPASGVFNFMCSCP
Trigger: CGGGCAGGAACACATAAAATTAAACACTCCTGATGCTGGGCACAAAGCCATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp GATGAGAATTTACTGGAGTGGAAGTCGGCAAAGTCATCTTCACTCTaGGTGGAGGAAGTGTTCTCTTTGAACTCCTCCATGGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: DENLLEWKSAKSSSL*VEEVFSLNSSMASP
Trigger: TGGGCTGGCCATGGAGGAGTTCAAAGAGAACACTTCCTCCACCAAGAGTGAAGATGACTTTGCCGACTTCCACTCCAGTAAATTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp TACACTTCCACCACACCTAGAAGATACTCCATGCCTTaGGCCGACTGGATAACTTCTGTGCAAACAGCACTG +
Preference number: 6 (lower is better)
Translates to: YTSTTPRRYSMP*ADWITSVQTAL
Trigger: CAGTGCTGTTTGCACAGAAGTTATCCAGTCGGCTCAAGGCATGGAGTATCTTCTAGGTGTGGTGGAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CCAGGGATTTGTCTGAGCTCGTGGATGAGAATTTACTaGAGTGGAAGTCGGCAAAGTCATCTTCACTCTTGG +
Preference number: 6 (lower is better)
Translates to: PGICLSSWMRIY*SGSRQSHLHSW
Trigger: CCAAGAGTGAAGATGACTTTGCCGACTTCCACTCCAGTAAATTCTCATCCACGAGCTCAGACAAATCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp CAGCTTAAGTCCTCTGTATCTGCGGCAGGAGGATGCTaGCCACTAACTGTTGGTAAATCCAAAGAGCTATCA +
Preference number: 6 (lower is better)
Translates to: QLKSSVSAAGGC*PLTVGKSKELS
Trigger: TGATAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCCGCAGATACAGAGGACTTAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CAA 72 bp CCCCATTGGTATTCCTGCCTGCATTGCAATCGGTCCTaGGGACATCTGAGAGCTGTAATTCATTCCCATCAT +
Preference number: 6 (lower is better)
Translates to: PHWYSCLHCNRS*GHLRAVIHSHH
Trigger: ATGATGGGAATGAATTACAGCTCTCAGATGTCCCAAGGACCGATTGCAATGCAGGCAGGAATACCAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp CCAGACTCTCCAAACGAAGCAGGGTTTTCAGAGGGCTaGTCAGTGGAAATCCCTTTGAACACTGCGTATTTG +
Preference number: 6 (lower is better)
Translates to: PDSPNEAGFSEG*SVEIPLNTAYL
Trigger: CAAATACGCAGTGTTCAAAGGGATTTCCACTGACAAGCCCTCTGAAAACCCTGCTTCGTTTGGAGAGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp CCAAACGAAGCAGGGTTTTCAGAGGGCTTGTCAGTGGAAATCCCTTaGAACACTGCGTATTTGTCTGTGGAGGCTTTAGTTCCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: PNEAGFSEGLSVEIP*NTAYLSVEALVPGN
Trigger: ATTTCCTGGAACTAAAGCCTCCACAGACAAATACGCAGTGTTCAAAGGGATTTCCACTGACAAGCCCTCTGAAAACCCTGCTTCGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp TGGAGCACTGTTTCCATGCTGGGAATTACTGGTTTTTaGGGAAGCAGGCATCTCTTGGAAGTCAGTGAAGGA +
Preference number: 6 (lower is better)
Translates to: WSTVSMLGITGF*GSRHLLEVSEG
Trigger: TCCTTCACTGACTTCCAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCCCAGCATGGAAACAGTGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp TGTGGAGGCTTTAGTTCCAGGAAATGGGATCAAGAGTaGTGGAGCACTGTTTCCATGCTGGGAATTACTGGT +
Preference number: 6 (lower is better)
Translates to: CGGFSSRKWDQE*WSTVSMLGITG
Trigger: ACCAGTAATTCCCAGCATGGAAACAGTGCTCCATCACTCTTGATCCCATTTCCTGGAACTAAAGCCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TGTTGTTCAAATCGTTTTTGTTGCTCTTCCGCAAACTaGTTCTGCATGTCTGGAGTGTACTGTGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: CCSNRFCCSSAN*FCMSGVYCGPA
Trigger: TGCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCGGAAGAGCAACAAAAACGATTTGAACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp AGAGTGATGGAGCACTGTTTCCATGCTGGGAATTACTaGTTTTTGAGGAAGCAGGCATCTCTTGGAAGTCAG +
Preference number: 6 (lower is better)
Translates to: RVMEHCFHAGNY*FLRKQASLGSQ
Trigger: CTGACTTCCAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCCCAGCATGGAAACAGTGCTCCATCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GATTTGTCTGAGCTCGTGGATGAGAATTTACTGGAGTaGAAGTCGGCAAAGTCATCTTCACTCTTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: DLSELVDENLLE*KSAKSSSLLVE
Trigger: CTCCACCAAGAGTGAAGATGACTTTGCCGACTTCCACTCCAGTAAATTCTCATCCACGAGCTCAGACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp TTACTGGAGTGGAAGTCGGCAAAGTCATCTTCACTCTaGGTGGAGGAAGTGTTCTCTTTGAACTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: LLEWKSAKSSSL*VEEVFSLNSSM
Trigger: CATGGAGGAGTTCAAAGAGAACACTTCCTCCACCAAGAGTGAAGATGACTTTGCCGACTTCCACTCCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GGTGTGAGTGTGGCAAGTGACATGAAGCCGATTAAGTaGTTCCACACTTTATCGATGTCCTTCAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: GVSVASDMKPIK*FHTLSMSFSNC
Trigger: GCAGTTGCTGAAGGACATCGATAAAGTGTGGAACAACTTAATCGGCTTCATGTCACTTGCCACACTCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TATTTATCACCAGACTCTCCAAACGAAGCAGGGTTTTCAGAGGGCTaGTCAGTGGAAATCCCTTTGAACACTGCGTATTTGTCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: YLSPDSPNEAGFSEG*SVEIPLNTAYLSVE
Trigger: CTCCACAGACAAATACGCAGTGTTCAAAGGGATTTCCACTGACAAGCCCTCTGAAAACCCTGCTTCGTTTGGAGAGTCTGGTGATAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp TTCAGAGGGCTTGTCAGTGGAAATCCCTTTGAACACTaGGTATTTGTCTGTGGAGGCTTTAGTTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: FRGLVSGNPFEH*VFVCGGFSSRK
Trigger: TTTCCTGGAACTAAAGCCTCCACAGACAAATACGCAGTGTTCAAAGGGATTTCCACTGACAAGCCCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS GCA 72 bp CACATCAGCCAATTTCATGTCAAATTGAACAGAAAGTaGATCTTCAGAGTCCTCCTTGCCAACACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: HISQFHVKLNRK*IFRVLLANTAA
Trigger: GGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTGTTCAATTTGACATGAAATTGGCTGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp TTTTCAGAGGGCTTGTCAGTGGAAATCCCTTTGAACACTGCGTATTaGTCTGTGGAGGCTTTAGTTCCAGGAAATGGGATCAAGAGTGAT +
Preference number: 6 (lower is better)
Translates to: FSEGLSVEIPLNTAY*SVEALVPGNGIKSD
Trigger: ATCACTCTTGATCCCATTTCCTGGAACTAAAGCCTCCACAGACAAATACGCAGTGTTCAAAGGGATTTCCACTGACAAGCCCTCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp GACATGCTTAAGATCTCCTCCCACATCAGCCAATTTCATGTCAAATaGAACAGAAAGTGCATCTTCAGAGTCCTCCTTGCCAACACTGCT +
Preference number: 6 (lower is better)
Translates to: DMLKISSHISQFHVK*NRKCIFRVLLANTA
Trigger: AGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTTTCTGTTCAATTTGACATGAAATTGGCTGATGTGGGAGGAGATCTTAAGCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp ATGTTTTCAGAGCTGCCAAATGAGATCTCTTTCGTGTaGAGGTTTGAGGTGGCTGAAAAGGACCTACTTCCT +
Preference number: 6 (lower is better)
Translates to: MFSELPNEISFV*RFEVAEKDLLP
Trigger: AGGAAGTAGGTCCTTTTCAGCCACCTCAAACCTTCACACGAAAGAGATCTCATTTGGCAGCTCTGAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS GCA 72 bp GCAAAGCTCTCTCCTAAAGGTTTACTGTCTGTCGTTTaGTCGAGTTCCCTGAAAGCACTGTATTTATCACCA +
Preference number: 6 (lower is better)
Translates to: AKLSPKGLLSVV*SSSLKALYLSP
Trigger: TGGTGATAAATACAGTGCTTTCAGGGAACTCGAGCAAACGACAGACAGTAAACCTTTAGGAGAGAGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp TTAAACCAGGGCAGTTCTTACTGGATCCTGGGACTATaGCTTTGTGCCCAGCATCAGGAGTGTTTAATTTTA +
Preference number: 6 (lower is better)
Translates to: LNQGSSYWILGL*LCAQHQECLIL
Trigger: TAAAATTAAACACTCCTGATGCTGGGCACAAAGCCATAGTCCCAGGATCCAGTAAGAACTGCCCTGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049714.15
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp TGGGAATTACTGGTTTTTGAGGAAGCAGGCATCTCTTaGAAGTCAGTGAAGGAATCATCGATGGATCCTGAT +
Preference number: 6 (lower is better)
Translates to: WELLVFEEAGIS*KSVKESSMDPD
Trigger: ATCAGGATCCATCGATGATTCCTTCACTGACTTCCAAGAGATGCCTGCTTCCTCAAAAACCAGTAATTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CCA 72 bp GACCATTCACAGCTTGTAAGTGTGCTCACTGTAAAATaGCTACTACAGCTTCCAAAAGCAGCACAGCTTAAG +
Preference number: 6 (lower is better)
Translates to: DHSQLVSVLTVK*LLQLPKAAQLK
Trigger: CTTAAGCTGTGCTGCTTTTGGAAGCTGTAGTAGCCATTTTACAGTGAGCACACTTACAAGCTGTGAATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049714.15
CDS CCA 72 bp TTGTTCCACACTTTATCGATGTCCTTCAGCAACTGCTaGAGTTTCTCACTACACACAGCAGTGGCTTTTATC +
Preference number: 6 (lower is better)
Translates to: LFHTLSMSFSNC*SFSLHTAVAFI
Trigger: GATAAAAGCCACTGCTGTGTGTAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATAAAGTGTGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp GGGCTTCACGCTGCTGAGAAGTCTGAGCTTTTGCTTTaGCTCTTCAAACTGACGTCTTTTTCTTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GLHAAEKSELLL*LFKLTSFSFFF
Trigger: GAAGAAGAAAGAAAAAGACGTCAGTTTGAAGAGCAAAAGCAAAAGCTCAGACTTCTCAGCAGCGTGAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS TCA 72 bp CTCTTGGAAGTCAGTGAAGGAATCATCGATGGATCCTaGTTTCGAAGCATCTTGAAAATCCTGGAAGTCATC +
Preference number: 6 (lower is better)
Translates to: LLEVSEGIIDGS*FRSILKILEVI
Trigger: GATGACTTCCAGGATTTTCAAGATGCTTCGAAATCAGGATCCATCGATGATTCCTTCACTGACTTCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 90 bp AAGGTTGCCAGCTCACTTTTGATCATTTCTTCACTGGATTTCATTTaGCTCTGGGAATTAGCTACTAAGAAGTCAAACTTGCTGATTTTG +
Preference number: 6 (lower is better)
Translates to: KVASSLLIISSLDFI*LWELATKKSNLLIL
Trigger: CAAAATCAGCAAGTTTGACTTCTTAGTAGCTAATTCCCAGAGCAAAATGAAATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8
CDS CAA 72 bp AGCTCACTTTTGATCATTTCTTCACTGGATTTCATTTaGCTCTGGGAATTAGCTACTAAGAAGTCAAACTTG +
Preference number: 6 (lower is better)
Translates to: SSLLIISSLDFI*LWELATKKSNL
Trigger: CAAGTTTGACTTCTTAGTAGCTAATTCCCAGAGCAAAATGAAATCCAGTGAAGAAATGATCAAAAGTGAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049714.15
ENSMUST00000092834.12
ENSMUST00000183456.8
ENSMUST00000183714.8