Pregenerated sensors for SYNPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056296Ensembl transcript IDs: ENSMUST00000070323.12, ENSMUST00000112656.4, ENSMUST00000153954.8, ENSMUST00000223583.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATaGAGGAAAGGCCATTCAGAGACTGCCCCACCTGGGGATCCATCC | + |
|
Preference number: 1 (lower is better) Translates to: ILTGANTETKCRADT*RKGHSETAPPGDPS Trigger: GGATGGATCCCCAGGTGGGGCAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR TCA 90 bp | GTGAGGCAACTCAGTCACAAAAATACATGCATGGTATGCATTCACTaGCAAGTGGCCCAAAACCTGGCAATACCCAAGATAACAATTCAC | + |
|
Preference number: 1 (lower is better) Translates to: VRQLSHKNTCMVCIH*QVAQNLAIPKITIH Trigger: GTGAATTGTTATCTTGGGTATTGCCAGGTTTTGGGCCACTTGTCAGTGAATGCATACCATGCATGTATTTTTGTGACTGAGTTGCCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR CCA 90 bp | CATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTaGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: HFLILLKLWCLNLPL*MQRKRHSTSTGSLD Trigger: GTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR TCA 90 bp | CATGAAATTCTCAAGCAAATGGATGGAACTAGAAAATATCCTGAGTaGGGCAACTCAGTCACAAAAATACATGCATGGTATGCATTCACT | + |
|
Preference number: 1 (lower is better) Translates to: HEILKQMDGTRKYPE*GNSVTKIHAWYAFT Trigger: AGTGAATGCATACCATGCATGTATTTTTGTGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTCCATCCATTTGCTTGAGAATTTCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGCCCCACGAAAGGAGTGTCCCTTaGTCCTGTGAAGGGTCGATG | + |
|
Preference number: 2 (lower is better) Translates to: RQSAEQIHEGKAIQRLPHERSVP*SCEGSM Trigger: CATCGACCCTTCACAGGACCAAGGGACACTCCTTTC...GTGGGGCAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTAGGACTACAGATCTCTaGTTTACATTCAACATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSASLDAKKTPLYKHRVIRTTDL*FTFNIL Trigger: GAGAATGTTGAATGTAAATCAGAGATCTGTAGTCCT...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTACTCATGATGCAAACTaGAATGTCTCCAGAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: KSASLDAKKTPLYKHRVITHDAN*NVSRNT Trigger: TGTATTTCTGGAGACATTTCAGTTTGCATCATGAGT...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATTGCTTAACAAACTCATaGTGCAAACTGAAATGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYCLTNS*CKLKCL Trigger: GAGACATTTCAGTTTGCATCATGAGTTTGTTAAGCA...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACCTTACAGAACACTATTaGCAAATAGGGAAAGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHLTEHY*QIGKAP Trigger: GGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAG...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCCTTCTGCTACTGAAATaGAGGGTGGTGATGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCLLLLK*RVVMLS Trigger: TGATAGCATCACCACCCTCCATTTCAGTAGCAGAAG...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCAAGCAAATGGATGGAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCACTTACAGAACACTATTaGCAAATAGGGAAAGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FSSKWMELENILSEATQSLTEHY*QIGKAP Trigger: GGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAG...TGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTCCATCCATTTGCTTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACACTCATGATGCAAACTaGAATGTCTCCAGAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHTHDAN*NVSRNT Trigger: TGTATTTCTGGAGACATTTCAGTTTGCATCATGAGT...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACCTGTGGAGAGTTTCATaGGAACCCTCTTTGGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNLWRVS*EPSLGI Trigger: TATTCCCAAAGAGGGTTCTCATGAAACTCTCCACAG...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCAAGCAAATGGATGGAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCATGTCCTGAGAGATTTTaGCAGAGCCTGATATATACA | + |
|
Preference number: 2 (lower is better) Translates to: FSSKWMELENILSEATQSCPERF*QSLIYT Trigger: TGTATATATCAGGCTCTGGCAAAATCTCTCAGGACA...TGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTCCATCCATTTGCTTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTCTTCTGCTACTGAAATaGAGGGTGGTGATGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: VMARKIRYTKLHRKLQECLLLLK*RVVMLS Trigger: TGATAGCATCACCACCCTCCATTTCAGTAGCAGAAG...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACCTAAATCTGCCTCTCTaGATGCAAAGAAAACGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNLNLPL*MQRKRH Trigger: GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAG...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCACAAAAATACATGCATGGTGCTTGCCCTTCCTGTTaGGCATTCTTATTTCAATTG | + |
|
Preference number: 2 (lower is better) Translates to: ELENILSEATQSQKYMHGACPSC*AFLFQL Trigger: CAATTGAAATAAGAATGCCCAACAGGAAGGGCAAGC...ACCATGCATGTATTTTTGTGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAGGACTACAGATCTCTaGTTTACATTCAACATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCRTTDL*FTFNIL Trigger: GAGAATGTTGAATGTAAATCAGAGATCTGTAGTCCT...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR CCA 72 bp | ATGGCCTTGTTGGGTATCAATGAAAGGAGTGTCCCTTaGTCCTGTGAAGGGTCGATGCCCCAGTATAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: MALLGINERSVP*SCEGSMPQYSG Trigger: TCCGCTATACTGGGGCATCGACCCTTCACAGGACCAAGGGACACTCCTTTCATTGATACCCAACAAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR GCA 72 bp | CAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTaGCCCACCTGGGGATCCATCCCATATACAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QSRYMKERPFRD*PTWGSIPYTAK Trigger: TTTGGCTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR CCA 72 bp | GGCTCCAGACATATATGTAGCAGAGGATGGCCTTGTTaGGTATCAATGAAAGGAGTGTCCCTTGGTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSRHICSRGWPC*VSMKGVSLGPV Trigger: CACAGGACCAAGGGACACTCCTTTCATTGATACCCAACAAGGCCATCCTCTGCTACATATATGTCTGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR GCA 72 bp | GAGATTTTGCCAGAGCCTGATATATACAGAGGTGGATaGTCTCAACTAGCCAATGGATTGGGCATGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EILPEPDIYRGG*SQLANGLGMGS Trigger: GGAACCCATGCCCAATCCATTGGCTAGTTGAGAGCATCCACCTCTGTATATATCAGGCTCTGGCAAAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTTCACCACCCAGGCCTTaGTGTCTTAATGAGGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: KSASLDAKKTPLYKHRVISPPRP*CLNEDY Trigger: GTAGTCCTCATTAAGACACAAAGGCCTGGGTGGTGA...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCACAAAAATACATGCATGGTGCAGGAGTGGGAGGGTaGATGGGGGCACACACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELENILSEATQSQKYMHGAGVGG*MGAHTH Trigger: ATGAGTGTGTGCCCCCATCAACCCTCCCACTCCTGC...ACCATGCATGTATTTTTGTGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGTCACCACCCAGGCCTTaGTGTCTTAATGAGGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: IQRQSAEQIHEGKAIQRLSPPRP*CLNEDY Trigger: GTAGTCCTCATTAAGACACAAAGGCCTGGGTGGTGA...CAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR TCA 72 bp | CTCAGTCACAAAAATACATGCATGGTATGCATTCACTaGCAAGTGGCCCAAAACCTGGCAATACCCAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: LSHKNTCMVCIH*QVAQNLAIPKI Trigger: TATCTTGGGTATTGCCAGGTTTTGGGCCACTTGTCAGTGAATGCATACCATGCATGTATTTTTGTGACTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR CCA 72 bp | ATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTaGATGCAAAGAAAACGCCACTCTACAAGCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILLKLWCLNLPL*MQRKRHSTSTG Trigger: CCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACTCACCACCCAGGCCTTaGTGTCTTAATGAGGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNSPPRP*CLNEDY Trigger: GTAGTCCTCATTAAGACACAAAGGCCTGGGTGGTGA...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTGTCAGAGTGACAAACTaGCAAAGTCTAGAAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: QSPYRTLLTNRESSQTLAVRVTN*QSLERH Trigger: ATGTCTTTCTAGACTTTGCAAGTTTGTCACTCTGAC...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR TCA 72 bp | ATAACAATTCACAGACCACATGAAGCTCAAGATGAATaGAGATCAAAGGCTTCACTCCTTAGAAGGGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ITIHRPHEAQDE*RSKASLLRRVN Trigger: GTTAACCCTTCTAAGGAGTGAAGCCTTTGATCTTCATTCATCTTGAGCTTCATGTGGTCTGTGAATTGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR TCA 72 bp | CTCAAGCAAATGGATGGAACTAGAAAATATCCTGAGTaGGGCAACTCAGTCACAAAAATACATGCATGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LKQMDGTRKYPE*GNSVTKIHAWY Trigger: ATACCATGCATGTATTTTTGTGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTCCATCCATTTGCTTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGCCTTACAGAACACTATaGACAAATAGGGAAAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IAHFLILLKLWCLNLPLWPYRTL*TNRESS Trigger: GGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGG...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGGTCAGAGTGACAAACTaGCAAAGTCTAGAAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: IAHFLILLKLWCLNLPLWVRVTN*QSLERH Trigger: ATGTCTTTCTAGACTTTGCAAGTTTGTCACTCTGAC...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR CCA 72 bp | AACAGCATAGCTCATTTCTTAATACTACTTAAACTATaGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSIAHFLILLKL*CLNLPLWMQRK Trigger: TTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTATGCTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTCAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVIQPQAS*IATTCC Trigger: GCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTG...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGACCCTTGGCTCCAGACATATATGTAGCAGAGGATGGCCTTGTTGGGTATCTGCAGAAAGACACCTaGATGGGTACGCAAACGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGPLAPDIYVAEDGLVGYLQKDT*MGTQTL Trigger: TAGCGTTTGCGTACCCATTCAGGTGTCTTTCTGCAG...ATACCCAACAAGGCCATCCTCTGCTACATATATGTCTGGAGCCAAGGGTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTCCCAGATTCGCCTGCTaGCTGTACCCACCACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVIPRFAC*LYPPLD Trigger: GTCAAGTGGTGGGTACAGCCAGCAGGCGAATCTGGG...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATCCCAGATTCGCCTGCTaGCTGTACCCACCACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYPRFAC*LYPPLD Trigger: GTCAAGTGGTGGGTACAGCCAGCAGGCGAATCTGGG...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACCAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHQPQAS*IATTCC Trigger: GCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTG...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTAAGGGGTTCCTTCAATaGCCGAAAGGTGCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVIKGFLQ*PKGARR Trigger: TCTGCGGGCACCTTTCGGGCATTGAAGGAACCCCTT...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS-3UTR GCA 90 bp | AGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGCCCCACCAGGGACCAGGAAACTaGAGAAAGACACCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RQSAEQIHEGKAIQRLPHQGPGN*RKTPEW Trigger: CCATTCAGGTGTCTTTCTGCAGTTTCCTGGTCCCTG...GTGGGGCAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGCCCCACGTGACAGTTGCAGAGTaGACAAACTGTGCCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSAEQIHEGKAIQRLPHVTVAE*TNCASL Trigger: CAGACTGGCACAGTTTGTCCACTCTGCAACTGTCAC...GTGGGGCAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATTGTTTAAGCTGGACATaGCAGGGCTGTGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYCLSWT*QGCGQP Trigger: TGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACA...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTTGCCAGTCTGATGCTTaGCTCAGGGACCAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVICQSDA*LRDQET Trigger: AGTTTCCTGGTCCCTGAGGCAAGCATCAGACTGGCA...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAATACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAACAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKYSQEQIQRQSAEQIHEQPQAS*IATTCC Trigger: GCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTG...TTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | AGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGCCCCACGATCTGTTGCCACTTTaGCATCAGACAGTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSAEQIHEGKAIQRLPHDLLPL*HQTVLL Trigger: CAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATC...GTGGGGCAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGTGTTTAAGCTGGACATaGCAGGGCTGTGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQRQSAEQIHEGKAIQRLCLSWT*QGCGQP Trigger: TGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACA...CAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTCACTTGTTGGAAGGCTaGTTGCAAGCTGACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVIHLLEG*LQADIS Trigger: GCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTG...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATCACTTGTTGGAAGGCTaGTTGCAAGCTGACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYHLLEG*LQADIS Trigger: GCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTG...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACGGCTGTGGACAGCCATaGACTTGTTGGAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHGCGQP*TCWKAA Trigger: AGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCC...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATCTCTGTCCAGAGGAATaGCAGCCAGTCTCCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYLCPEE*QPVSLK Trigger: TTTCAAGGAGACTGGCTGGCATTCCTCTGGACAGAG...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTCTCTGTCCAGAGGAATaGCAGCCAGTCTCCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVILCPEE*QPVSLK Trigger: TTTCAAGGAGACTGGCTGGCATTCCTCTGGACAGAG...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATCTGTTGCAGCCTGAATaGGTACGCAAACGCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYLLQPE*VRKRYV Trigger: GACATAGCGTTTGCGTACCCATTCAGGCTGCAACAG...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATGGACCACTAGGCTGTTaGCCAAACTCATCGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYGPLGC*PNSSEV Trigger: AACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCC...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACAGGCTGCTTGCAAGCTaGCATCAGCAACAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHRLLAS*HQQQDF Trigger: GAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCT...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | TACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGAGGCTGCTTGCAAGCTaGCATCAGCAACAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSQEQIQRQSAEQIHEGKRLLAS*HQQQDF Trigger: GAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCT...CTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTGTTTAAGCTGGACATaGCAGGGCTGTGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHCLSWT*QGCGQP Trigger: TGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACA...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTTGTTGGAAGGCTGCTTaGAAGCTGACATCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVICWKAA*KLTSAT Trigger: TGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACA...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACCAGCCATGCACTTGTTaGAAGGCTGCTTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHQPCTC*KAACKL Trigger: CAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTG...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATTACTTTCTGTCTTATTaGCACAGTCCACACTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYYFLSY*HSPHSA Trigger: GGCTGAGTGTGGACTGTGTCAATAAGACAGAAAGTA...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATGCCAGCCAGTCTCCTTaGAAACAAACCAAATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYASQSP*KQTKCF Trigger: GAAACATTTGGTTTGTTTTCAAGGAGACTGGCTGGC...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACACCAATGCCAGCTTCTaGTGTTCCTTTCCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHTNASF*CSFPSQ Trigger: CTGTGAGGGAAAGGAACAGCAGAAGCTGGCATTGGT...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACGGAGTCTCCAACCAATaGCAGCTTCTGCTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHGVSNQ*QLLLFL Trigger: AAGGAACAGCAGAAGCTGGCATTGGTTGGAGACTCC...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTGGCTGTGGACAGCCATaGACTTGTTGGAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFGCGQP*TCWKAA Trigger: AGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCC...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTGTCCTTGATTGTAGCTaGTGGAGTGCTTCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPYRTLLTNRESSQTLAVLDCS*WSASPW Trigger: CCATGGAGAAGCACTCCAGCAGCTACAATCAAGGAC...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTTCGCGGTACTTGTTCTaGAAGAAAATGTACACGACC | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVISRYLF*KKMYTT Trigger: GGTCGTGTACATTTTCTTCCAGAACAAGTACCGCGA...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACGATAAAGTCAATGAGTaGGCCCCGGTTGTTTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHDKVNE*APVVFA Trigger: CGCGAAAACAACCGGGGCCCACTCATTGACTTTATC...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTGATAAAGTCAATGAGTaGGCCCCGGTTGTTTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSPYRTLLTNRESSQTLADKVNE*APVVFA Trigger: CGCGAAAACAACCGGGGCCCACTCATTGACTTTATC...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTCCCAGATTCGCCTGCTaGCTGTACCCACCACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECPRFAC*LYPPLD Trigger: GTCAAGTGGTGGGTACAGCCAGCAGGCGAATCTGGG...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCCTTCTCCATGGGGTCTaGAAGGTATCTCTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCLLHGV*KVSLSR Trigger: TCTGGACAGAGATACCTTTCAGACCCCATGGAGAAG...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCGGAGTCTCCAACCAATaGCAGCTTCTGCTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCGVSNQ*QLLLFL Trigger: AAGGAACAGCAGAAGCTGGCATTGGTTGGAGACTCC...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCATCAGACAGTCCTTTTaGCCAAGCAGAGGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCIRQSF*PSRGTH Trigger: GTGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGAT...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTGTTGGAAGGCTGCTTaGAAGCTGACATCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHCWKAA*KLTSAT Trigger: TGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACA...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAAAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAGTCCTTGATTGTAGCTaGTGGAGTGCTTCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKNSSATEMEGGDAITRVLDCS*WSASPW Trigger: CCATGGAGAAGCACTCCAGCAGCTACAATCAAGGAC...TCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTTTAAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTCAGCCATGCACTTGTTaGAAGGCTGCTTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFQPCTC*KAACKL Trigger: CAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTG...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTTAAAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAGGACCACTAGGCTGTTaGCCAAACTCATCGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKNSSATEMEGGDAITRGPLGC*PNSSEV Trigger: AACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCC...TCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTTTAAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACGATCTGTTGCCACTTTaGCATCAGACAGTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHDLLPL*HQTVLL Trigger: CAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATC...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACGCCAGCCAGTCTCCTTaGAAACAAACCAAATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHASQSP*KQTKCF Trigger: GAAACATTTGGTTTGTTTTCAAGGAGACTGGCTGGC...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAATACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAAATCAGACAGTCCTTTTaGCCAAGCAGAGGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKYSQEQIQRQSAEQIHEIRQSF*PSRGTH Trigger: GTGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGAT...TTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | ACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGGTTCTTTGGGATCTGTTaGCACTTTGACATCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: THRSKYRDKVQSRYMKERFFGIC*HFDIRQ Trigger: CTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAA...CCTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTCTGTTGCAGCCTGAATaGGTACGCAAACGCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFLLQPE*VRKRYV Trigger: GACATAGCGTTTGCGTACCCATTCAGGCTGCAACAG...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTGATAAAGTCAATGAGTaGGCCCCGGTTGTTTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFDKVNE*APVVFA Trigger: CGCGAAAACAACCGGGGCCCACTCATTGACTTTATC...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | GAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCACAAAAATACATGCATGGTCTTGATTGTAGCTGCTaGAGTGCTTCTCCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELENILSEATQSQKYMHGLDCSC*SASPWG Trigger: ACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAG...ACCATGCATGTATTTTTGTGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTGGACCACTAGGCTGTTaGCCAAACTCATCGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFGPLGC*PNSSEV Trigger: AACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCC...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| 3UTR CAA 72 bp | CAGAGAAGTGTTGAGCAGTCACCTTACAGAACACTATaGACAAATAGGGAAAGCTCCCAGACTTTAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRSVEQSPYRTL*TNRESSQTLAL Trigger: TAGAGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTGCTCAACACTTCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCCACCAGCCACAAGAATaGAAAGACTACAGTGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCHQPQE*KDYSDD Trigger: ATCGTCACTGTAGTCTTTTCATTCTTGTGGCTGGTG...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGAGGCTGCTTGCAAGCTaGCATCAGCAACAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IAHFLILLKLWCLNLPLWRLLAS*HQQQDF Trigger: GAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCT...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTTAAAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAGCCAGCCAGTCTCCTTaGAAACAAACCAAATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLKNSSATEMEGGDAITRASQSP*KQTKCF Trigger: GAAACATTTGGTTTGTTTTCAAGGAGACTGGCTGGC...TCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTTTAAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTCTTCTCCATGGGGTCTaGAAGGTATCTCTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECLLHGV*KVSLSR Trigger: TCTGGACAGAGATACCTTTCAGACCCCATGGAGAAG...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTACCAATGCCAGCTTCTaGTGTTCCTTTCCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECTNASF*CSFPSQ Trigger: CTGTGAGGGAAAGGAACAGCAGAAGCTGGCATTGGT...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACATCAGACAGTCCTTTTaGCCAAGCAGAGGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNIRQSF*PSRGTH Trigger: GTGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGAT...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTTTCTTTGGGATCTGTTaGCACTTTGACATCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPYRTLLTNRESSQTLAFFGIC*HFDIRQ Trigger: CTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAA...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTGTCCTTGATTGTAGCTaGTGGAGTGCTTCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECVLDCS*WSASPW Trigger: CCATGGAGAAGCACTCCAGCAGCTACAATCAAGGAC...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTTAAAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGATCGCGGTACTTGTTCTaGAAGAAAATGTACACGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLKNSSATEMEGGDAITRSRYLF*KKMYTT Trigger: GGTCGTGTACATTTTCTTCCAGAACAAGTACCGCGA...TCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTTTAAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTCTTGATTGTAGCTGCTaGAGTGCTTCTCCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECLDCSC*SASPWG Trigger: ACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAG...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACCTTGATTGTAGCTGCTaGAGTGCTTCTCCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNLDCSC*SASPWG Trigger: ACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAG...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACACGCTATGTCAATGCTaGGGTTACTTTCTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHTLCQC*GYFLSY Trigger: ATAAGACAGAAAGTAACCTCAGCATTGACATAGCGT...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTCACCAGCCACAAGAATaGAAAGACTACAGTGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFHQPQE*KDYSDD Trigger: ATCGTCACTGTAGTCTTTTCATTCTTGTGGCTGGTG...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGACCAATGCCAGCTTCTaGTGTTCCTTTCCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IAHFLILLKLWCLNLPLWTNASF*CSFPSQ Trigger: CTGTGAGGGAAAGGAACAGCAGAAGCTGGCATTGGT...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCTTCTTTGGGATCTGTTaGCACTTTGACATCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTGPYSYDSSLFSQFVCFFGIC*HFDIRQ Trigger: CTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAA...GCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGTTGGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTTGCAAATGCAAACATTaGAAAAAGCGGAGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KSASLDAKKTPLYKHRVICKCKH*KKRSKY Trigger: ATATTTGCTCCGCTTTTTGCAATGTTTGCATTTGCA...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112656.4 |
||
| CDS-3UTR TCA 90 bp | ACTCTTAAAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAACGCTATGTCAATGCTaGGGTTACTTTCTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKNSSATEMEGGDAITRTLCQC*GYFLSY Trigger: ATAAGACAGAAAGTAACCTCAGCATTGACATAGCGT...TCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTTTAAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCAAGCAAATGGATGGAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCAACGCTATGTCAATGCTaGGGTTACTTTCTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSKWMELENILSEATQSTLCQC*GYFLSY Trigger: ATAAGACAGAAAGTAACCTCAGCATTGACATAGCGT...TGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTCCATCCATTTGCTTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACCACCAGCCACAAGAATaGAAAGACTACAGTGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNHQPQE*KDYSDD Trigger: ATCGTCACTGTAGTCTTTTCATTCTTGTGGCTGGTG...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACGATCTGTTGCCACTTTaGCATCAGACAGTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNDLLPL*HQTVLL Trigger: CAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATC...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTATAGCCACCACATGTTaGAAATGCAAACATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPYRTLLTNRESSQTLAIATTC*KCKHCK Trigger: TTTGCAATGTTTGCATTTGCAACATGTGGTGGCTAT...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | TACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGTGCAAATGCAAACATTaGAAAAAGCTCCTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: YSQEQIQRQSAEQIHEGKCKCKH*KKLLCI Trigger: AATGCAGAGGAGCTTTTTGCAATGTTTGCATTTGCA...CTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTTCGCGGTACTTGTTCTaGAAGAAAATGTACACGACC | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECSRYLF*KKMYTT Trigger: GGTCGTGTACATTTTCTTCCAGAACAAGTACCGCGA...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACAGAAAGACACCTGAATaGGTACGCAAACGCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNRKTPE*VRKRYV Trigger: GACATAGCGTTTGCGTACCCATTCAGGTGTCTTTCT...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGTACTTTCTGTCTTATTaGCACAGTCCACACTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAHFLILLKLWCLNLPLWYFLSY*HSPHSA Trigger: GGCTGAGTGTGGACTGTGTCAATAAGACAGAAAGTA...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTTATGAATCTTCTGTCTaGCTCTTCTCCTTTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFYESSV*LFSFSM Trigger: CATGCTAAAGGAGAAGAGCCAGACAGAAGATTCATA...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTATAGCCACCACATGTTaGAAATGCAAACATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KILLLLKWRVVMLSPEEFIATTC*KCKHCK Trigger: TTTGCAATGTTTGCATTTGCAACATGTGGTGGCTAT...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTACCACATGTTGCAAATaGAAACATTGCAAAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VMARKIRYTKLHRKLQECTTCCK*KHCKKR Trigger: CCGCTTTTTGCAATGTTTGCATTTGCAACATGTGGT...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112656.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACAGAGATGATGAATTATaGATCTTCTGTCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNRDDEL*IFCLAL Trigger: AAGAGCCAGACAGAAGATTCATAATTCATCATCTCT...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGTGCAAATGCAAACATTaGAAAAAGCAACTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAHFLILLKLWCLNLPLWCKCKH*KKQLQS Trigger: GCTCTGGAGTTGCTTTTTGCAATGTTTGCATTTGCA...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACACCACATGTTGCAAATaGAAACATTGCAAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNTTCCK*KHCKKQ Trigger: TTGCTTTTTGCAATGTTTGCATTTGCAACATGTGGT...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS GCA 90 bp | AAAAAGCAACTCCAGAGCTCGCAGGAAGGCAAGGGGTTCCTTCAATaGCCGAAAGGTGCCCGCAGAGGCCACCTGGCTCACAGGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KKQLQSSQEGKGFLQ*PKGARRGHLAHRVH Trigger: ATGGACCCTGTGAGCCAGGTGGCCTCTGCGGGCACCTTTCGGGCATTGAAGGAACCCCTTGCCTTCCTGCGAGCTCTGGAGTTGCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS TCA 90 bp | ATCGGAAGTTGGCCCCAGATTCGCCTGCTGGCTGTACCCACCACTTaGCCCATAACTCTCTTGGTTGTAGCGTCCTTGATTGTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGSWPQIRLLAVPTT*PITLLVVASLIVAA Trigger: AGCAGCTACAATCAAGGACGCTACAACCAAGAGAGTTATGGGTCAAGTGGTGGGTACAGCCAGCAGGCGAATCTGGGGCCAACTTCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS TCA 90 bp | GTAGCGTCCTTGATTGTAGCTGCTGGAGTGCTTCTCCATGGGGTCTaGAAGGTATCTCTGTCCAGAGGAATGCCAGCCAGTCTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VASLIVAAGVLLHGV*KVSLSRGMPASLLE Trigger: TTCAAGGAGACTGGCTGGCATTCCTCTGGACAGAGATACCTTTCAGACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAGGACGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS GCA 90 bp | CTGGACATGACAGGGCTGTGGACAGCCATGCACTTGTTGGAAGGCTaGTTGCAAGCTGACATCAGCAACAGGACTTCTTTGGGATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDMTGLWTAMHLLEG*LQADISNRTSLGSV Trigger: AACAGATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CCA 90 bp | AACCCGAAGACCACAGATGTGTTTAAGCTGGACATGACAGGGCTGTaGACAGCCATGCACTTGTTGGAAGGCTGCTTGCAAGCTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: NPKTTDVFKLDMTGL*TAMHLLEGCLQADI Trigger: GATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACACATCTGTGGTCTTCGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS TCA 90 bp | AAGCTGACATCAGCAACAGGACTTCTTTGGGATCTGTTGCCACTTTaGCATCAGACAGTCCTTTTGCCCAAGCAGAGGAACCCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLTSATGLLWDLLPL*HQTVLLPKQRNPPA Trigger: GGCTGGTGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS GCA 90 bp | CACTTGACCCATAACTCTCTTGGTTGTAGCGTCCTTGATTGTAGCTaGTGGAGTGCTTCTCCATGGGGTCTGAAAGGTATCTCTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLTHNSLGCSVLDCS*WSASPWGLKGISVQ Trigger: CTGGACAGAGATACCTTTCAGACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAGGACGCTACAACCAAGAGAGTTATGGGTCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CCA 90 bp | TTGACCCATAACTCTCTTGGTTGTAGCGTCCTTGATTGTAGCTGCTaGAGTGCTTCTCCATGGGGTCTGAAAGGTATCTCTGTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTHNSLGCSVLDCSC*SASPWGLKGISVQR Trigger: CCTCTGGACAGAGATACCTTTCAGACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAGGACGCTACAACCAAGAGAGTTATGGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATGGGACCACTAGGCTGTaGGCCAAACTCATCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYGTTRL*AKLIGS Trigger: ACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCCC...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTTGGACAGCCATGCACTaGTTGGAAGGCTGCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KSASLDAKKTPLYKHRVIWTAMH*LEGCLQ Trigger: TTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCA...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGCTGTACCCACCACTaGACCCATAACTCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSASLDAKKTPLYKHRVIGCTHH*THNSLG Trigger: ACCAAGAGAGTTATGGGTCAAGTGGTGGGTACAGCC...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS TCA 90 bp | ACTTTCTGTCTTATTGACACAGTCCACACTCAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGCAAATGCAAACATTGCAAAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TFCLIDTVHTQPQAS*IATTCCKCKHCKKR Trigger: CCGCTTTTTGCAATGTTTGCATTTGCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTGAGTGTGGACTGTGTCAATAAGACAGAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112656.4 ENSMUST00000153954.8 |
||
| CDS GCA 90 bp | TGCTGTTCCTTTCCCTCACAGGTGGGCACTTCAAAGGTCACCTGTTaGAGCCTAAGATCTCCTTTATACAATCCAAGTGACAGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCSFPSQVGTSKVTC*SLRSPLYNPSDSCR Trigger: TCTGCAACTGTCACTTGGATTGTATAAAGGAGATCTTAGGCTGCAACAGGTGACCTTTGAAGTGCCCACCTGTGAGGGAAAGGAACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153954.8 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGTGGACAGCCATGCACTaGTTGGAAGGCTGCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IQRQSAEQIHEGKAIQRLWTAMH*LEGCLQ Trigger: TTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCA...CAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTGGGACCACTAGGCTGTaGGCCAAACTCATCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPYRTLLTNRESSQTLAGTTRL*AKLIGS Trigger: ACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCCC...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS TCA 90 bp | ACTTTCTGTCTTATTGACACAGTCCACACTCAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGCAAATGCAAACATTGCAAAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TFCLIDTVHTQPQAS*IATTCCKCKHCKKL Trigger: GAGCTTTTTGCAATGTTTGCATTTGCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTGAGTGTGGACTGTGTCAATAAGACAGAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGACCCTTGGCTCCAGACATATATGTAGCAGAGGATGGCCTTGTTGGGTATTTGTTTTCGCGGTACTaGTTCTGGAAGAAAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPLAPDIYVAEDGLVGYLFSRY*FWKKMY Trigger: GTACATTTTCTTCCAGAACAAGTACCGCGAAAACAA...ATACCCAACAAGGCCATCCTCTGCTACATATATGTCTGGAGCCAAGGGTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTCATCAGACAGTCCTTTaGCCCAAGCAGAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSPYRTLLTNRESSQTLAHQTVL*PKQRNP Trigger: TGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGATG...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | TACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGCATCAGACAGTCCTTTaGCCCAAGCAGAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSQEQIQRQSAEQIHEGKHQTVL*PKQRNP Trigger: TGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGATG...CTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCACCTTACAGAACACTATTGACAAATAGGGAAAGCTCCCAGACTTTAGCTTGGACAGCCATGCACTaGTTGGAAGGCTGCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QSPYRTLLTNRESSQTLAWTAMH*LEGCLQ Trigger: TTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCA...AGCTAAAGTCTGGGAGCTTTCCCTATTTGTCAATAGTGTTCTGTAAGGTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS TCA 90 bp | ACTTTCTGTCTTATTGACACAGTCCACACTCAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGCAAATGCAAACATTGCAAAAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TFCLIDTVHTQPQAS*IATTCCKCKHCKKQ Trigger: TTGCTTTTTGCAATGTTTGCATTTGCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTGAGTGTGGACTGTGTCAATAAGACAGAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS-3UTR CAA 90 bp | AAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGATCTGTTGCCACTTaGACATCAGACAGTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSASLDAKKTPLYKHRVIGSVAT*TSDSPF Trigger: AAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCC...AATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTGGGACCACTAGGCTGTaGGCCAAACTCATCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KILLLLKWRVVMLSPEEFGTTRL*AKLIGS Trigger: ACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCCC...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACATGAGTGGGCCCCGGTaGTTTTCGCGGTACTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNMSGPR*FSRYLF Trigger: GAACAAGTACCGCGAAAACAACCGGGGCCCACTCAT...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | GTCATGGCTCGTAAGATAAGATACACGAAACTGCATAGAAAGTTACAAGAATGTATGAGTGGGCCCCGGTaGTTTTCGCGGTACTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VMARKIRYTKLHRKLQECMSGPR*FSRYLF Trigger: GAACAAGTACCGCGAAAACAACCGGGGCCCACTCAT...ACATTCTTGTAACTTTCTATGCAGTTTCGTGTATCTTATCTTACGAGCCATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTTAAAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGATTGGTTGTAGCGTCCTaGATTGTAGCTGCTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLKNSSATEMEGGDAITRLVVAS*IVAAGV Trigger: CACTCCAGCAGCTACAATCAAGGACGCTACAACCAA...TCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTTTAAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | GAACTAGAAAATATCCTGAGTGAGGCAACTCAGTCACAAAAATACATGCATGGTGGCTGTACCCACCACTaGACCCATAACTCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELENILSEATQSQKYMHGGCTHH*THNSLG Trigger: ACCAAGAGAGTTATGGGTCAAGTGGTGGGTACAGCC...ACCATGCATGTATTTTTGTGACTGAGTTGCCTCACTCAGGATATTTTCTAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGATGCAAAGAAAACGCCACTCTACAAGCACAGGGTCATTGGACGTTATTTGTTTTCGCGGTACTaGTTCTGGAAGAAAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLDAKKTPLYKHRVIGRYLFSRY*FWKKMY Trigger: GTACATTTTCTTCCAGAACAAGTACCGCGAAAACAA...ATAACGTCCAATGACCCTGTGCTTGTAGAGTGGCGTTTTCTTTGCATCCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACCATCAGACAGTCCTTTaGCCCAAGCAGAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNHQTVL*PKQRNP Trigger: TGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGATG...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTTTGTTGGAAGGCTGCTaGCAAGCTGACATCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KILLLLKWRVVMLSPEEFLLEGC*QADISN Trigger: GTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAA...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTTTGGTTGTAGCGTCCTaGATTGTAGCTGCTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KILLLLKWRVVMLSPEEFLVVAS*IVAAGV Trigger: CACTCCAGCAGCTACAATCAAGGACGCTACAACCAA...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACGGCTGTACCCACCACTaGACCCATAACTCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNGCTHH*THNSLG Trigger: ACCAAGAGAGTTATGGGTCAAGTGGTGGGTACAGCC...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACTTGTTGGAAGGCTGCTaGCAAGCTGACATCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNLLEGC*QADISN Trigger: GTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAA...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGACAAAGTGCAGAGCAGATACATGAAGGAAAGGCCATTCAGAGACTGTTGCAAATGCAAACATaGCAAAAAGCTCCTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQRQSAEQIHEGKAIQRLLQMQT*QKAPLH Trigger: ATGCAGAGGAGCTTTTTGCAATGTTTGCATTTGCAA...CAGTCTCTGAATGGCCTTTCCTTCATGTATCTGCTCTGCACTTTGTCTCTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS CCA 90 bp | CCATGCTTTTTCATACAAGAGATGATGAATTATGAATCTTCTGTCTaGCTCTTCTCCTTTAGCATGGTGAGTCTGGTGTTGTGCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PCFFIQEMMNYESSV*LFSFSMVSLVLCSH Trigger: ATGAGAGCACAACACCAGACTCACCATGCTAAAGGAGAAGAGCCAGACAGAAGATTCATAATTCATCATCTCTTGTATGAAAAAGCATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | CTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGATGCAAAGAAAACGCCACTTGTTTTCGCGGTACTaGTTCTGGAAGAAAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLKLWCLNLPLWMQRKRHLFSRY*FWKKMY Trigger: GTACATTTTCTTCCAGAACAAGTACCGCGAAAACAA...GTGGCGTTTTCTTTGCATCCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTTCTGCTACTGAAATGGAGGGTGGTGATGCTATCACCAGAAGAATTTGGATCTGTTGCCACTTaGACATCAGACAGTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KILLLLKWRVVMLSPEEFGSVAT*TSDSPF Trigger: AAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCC...AAATTCTTCTGGTGATAGCATCACCACCCTCCATTTCAGTAGCAGAAGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCTCATTTCTTAATACTACTTAAACTATGGTGTCTAAATCTGCCTCTCTGGTTGGTTGTAGCGTCCTaGATTGTAGCTGCTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IAHFLILLKLWCLNLPLWLVVAS*IVAAGV Trigger: CACTCCAGCAGCTACAATCAAGGACGCTACAACCAA...CCAGAGAGGCAGATTTAGACACCATAGTTTAAGTAGTATTAAGAAATGAGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAATACTCACAGGAGCAAATACAGAGACAAAGTGCAGAGCAGATACATGAATTCAAAGGTCACCTGTaGCAGCCTAAGATCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TKYSQEQIQRQSAEQIHEFKGHL*QPKISF Trigger: AAAGGAGATCTTAGGCTGCAACAGGTGACCTTTGAA...TTCATGTATCTGCTCTGCACTTTGTCTCTGTATTTGCTCCTGTGAGTATTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACGGATCTGTTGCCACTTaGACATCAGACAGTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNGSVAT*TSDSPF Trigger: AAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCC...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCCCTATAGTTATGATTCTTCATTGTTCAGTCAGTTTGTATGCAATAACTTGCAAATGCAAACATaGCAAAAAGCGGAGCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: TGPYSYDSSLFSQFVCNNLQMQT*QKAEQI Trigger: TATTTGCTCCGCTTTTTGCAATGTTTGCATTTGCAA...GTTATTGCATACAAACTGACTGAACAATGAAGAATCATAACTATAGGGCCCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112656.4 |
||
| CDS GCA 72 bp | CTCCAGAGCTCGCAGGAAGGCAAGGGGTTCCTTCAATaGCCGAAAGGTGCCCGCAGAGGCCACCTGGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQSSQEGKGFLQ*PKGARRGHLAH Trigger: GTGAGCCAGGTGGCCTCTGCGGGCACCTTTCGGGCATTGAAGGAACCCCTTGCCTTCCTGCGAGCTCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS CCA 72 bp | GGGACCACTAGGCTGTTGGCCAAACTCATCGGAAGTTaGCCCCAGATTCGCCTGCTGGCTGTACCCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: GTTRLLAKLIGS*PQIRLLAVPTT Trigger: AGTGGTGGGTACAGCCAGCAGGCGAATCTGGGGCCAACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | CATCGGAAGTTGGCCCCAGATTCGCCTGCTGGCTGTACCCACCACTaGACCCATAACTCTCTTGGTTGTAGCGTCCTTGATTGTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HRKLAPDSPAGCTHH*THNSLGCSVLDCSC Trigger: GCAGCTACAATCAAGGACGCTACAACCAAGAGAGTTATGGGTCAAGTGGTGGGTACAGCCAGCAGGCGAATCTGGGGCCAACTTCCGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 72 bp | GGGCTGTGGACAGCCATGCACTTGTTGGAAGGCTGCTaGCAAGCTGACATCAGCAACAGGACTTCTTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLWTAMHLLEGC*QADISNRTSLG Trigger: TCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 72 bp | AAGCTGGACATGACAGGGCTGTGGACAGCCATGCACTaGTTGGAAGGCTGCTTGCAAGCTGACATCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KLDMTGLWTAMH*LEGCLQADISN Trigger: GTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTCCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | GACATGACAGGGCTGTGGACAGCCATGCACTTGTTGGAAGGCTGCTaGCAAGCTGACATCAGCAACAGGACTTCTTTGGGATCTGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DMTGLWTAMHLLEGC*QADISNRTSLGSVA Trigger: GGCAACAGATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS GCA 72 bp | GGCTGTGGACAGCCATGCACTTGTTGGAAGGCTGCTTaGAAGCTGACATCAGCAACAGGACTTCTTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GCGQPCTCWKAA*KLTSATGLLWD Trigger: ATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS GCA 72 bp | ACAGGGCTGTGGACAGCCATGCACTTGTTGGAAGGCTaGTTGCAAGCTGACATCAGCAACAGGACTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGLWTAMHLLEG*LQADISNRTSL Trigger: CAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | CACAGTCCACACTCAGCCGCAGGCCTCCTGAATAGCCACCACATGTaGCAAATGCAAACATTGCAAAAAGCAACTCCAGAGCTCGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HSPHSAAGLLNSHHM*QMQTLQKATPELAG Trigger: TCCTGCGAGCTCTGGAGTTGCTTTTTGCAATGTTTGCATTTGCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTGAGTGTGGACTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070323.12 |
||
| CDS CAA 90 bp | CAAGCTGACATCAGCAACAGGACTTCTTTGGGATCTGTTGCCACTTaGACATCAGACAGTCCTTTTGCCCAAGCAGAGGAACCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QADISNRTSLGSVAT*TSDSPFAQAEEPTS Trigger: GCTGGTGGGTTCCTCTGCTTGGGCAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | GTGTTTAAGCTGGACATGACAGGGCTGTGGACAGCCATGCACTTGTaGGAAGGCTGCTTGCAAGCTGACATCAGCAACAGGACTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VFKLDMTGLWTAMHL*EGCLQADISNRTSL Trigger: CAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | GATGTGTTTAAGCTGGACATGACAGGGCTGTGGACAGCCATGCACTaGTTGGAAGGCTGCTTGCAAGCTGACATCAGCAACAGGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DVFKLDMTGLWTAMH*LEGCLQADISNRTS Trigger: AGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CCA 72 bp | GGTGGGCACTTCAAAGGTCACCTGTTGCAGCCTGAATaGGTACGCAAACGCTATGTCAATGCTGAGGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: GGHFKGHLLQPE*VRKRYVNAEVT Trigger: AGTAACCTCAGCATTGACATAGCGTTTGCGTACCCATTCAGGCTGCAACAGGTGACCTTTGAAGTGCCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 |
||
| CDS CCA 72 bp | ACCACAGATGTGTTTAAGCTGGACATGACAGGGCTGTaGACAGCCATGCACTTGTTGGAAGGCTGCTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TTDVFKLDMTGL*TAMHLLEGCLQ Trigger: TTGCAAGCAGCCTTCCAACAAGTGCATGGCTGTCCACAGCCCTGTCATGTCCAGCTTAAACACATCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS TCA 72 bp | CTTATTGACACAGTCCACACTCAGCCGCAGGCCTCCTaGATAGCCACCACATGTTGCAAATGCAAACATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LIDTVHTQPQAS*IATTCCKCKHC Trigger: GCAATGTTTGCATTTGCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTGAGTGTGGACTGTGTCAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000153954.8 ENSMUST00000223583.2 |
||
| CDS GCA 72 bp | TACAATCCAAGTGACAGTTGCAGAGTGGACAAACTGTaGCAGTCTGATGCTTGCCTCAGGGACCAGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: YNPSDSCRVDKL*QSDACLRDQET Trigger: AGTTTCCTGGTCCCTGAGGCAAGCATCAGACTGGCACAGTTTGTCCACTCTGCAACTGTCACTTGGATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153954.8 ENSMUST00000223583.2 |
||
| CDS CCA 72 bp | CCTCAGGGACCAGGAAACTGCAGAAAGACACCTGAATaGGTACGCAAACGCTATGTCAATGCTGAGGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: PQGPGNCRKTPE*VRKRYVNAEVT Trigger: AGTAACCTCAGCATTGACATAGCGTTTGCGTACCCATTCAGGTGTCTTTCTGCAGTTTCCTGGTCCCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153954.8 ENSMUST00000223583.2 |
||
| CDS CAA 72 bp | GGCTGCTTGCAAGCTGACATCAGCAACAGGACTTCTTaGGGATCTGTTGCCACTTTGACATCAGACAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCLQADISNRTS*GSVATLTSDSP Trigger: AGGACTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 72 bp | TATCTGATTGTTAAAGGAAGTGGGACCACTAGGCTGTaGGCCAAACTCATCGGAAGTTGGCCCCAGATTCGC | + |
|
Preference number: 6 (lower is better) Translates to: YLIVKGSGTTRL*AKLIGSWPQIR Trigger: GCGAATCTGGGGCCAACTTCCGATGAGTTTGGCCAACAGCCTAGTGGTCCCACTTCCTTTAACAATCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | CACAGTCCACACTCAGCCGCAGGCCTCCTGAATAGCCACCACATGTaGCAAATGCAAACATTGCAAAAAGCGGAGCAAATATCACCATAC | + |
|
Preference number: 6 (lower is better) Translates to: HSPHSAAGLLNSHHM*QMQTLQKAEQISPY Trigger: GTATGGTGATATTTGCTCCGCTTTTTGCAATGTTTGCATTTGCAACATGTGGTGGCTATTCAGGAGGCCTGCGGCTGAGTGTGGACTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112656.4 ENSMUST00000153954.8 |
||
| CDS TCA 72 bp | TCAGCAACAGGACTTCTTTGGGATCTGTTGCCACTTTaGCATCAGACAGTCCTTTTGCCCAAGCAGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SATGLLWDLLPL*HQTVLLPKQRN Trigger: GTTCCTCTGCTTGGGCAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAAGTCCTGTTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS GCA 72 bp | CATAACTCTCTTGGTTGTAGCGTCCTTGATTGTAGCTaGTGGAGTGCTTCTCCATGGGGTCTGAAAGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: HNSLGCSVLDCS*WSASPWGLKGI Trigger: GATACCTTTCAGACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAGGACGCTACAACCAAGAGAGTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CCA 72 bp | AACTCTCTTGGTTGTAGCGTCCTTGATTGTAGCTGCTaGAGTGCTTCTCCATGGGGTCTGAAAGGTATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSLGCSVLDCSC*SASPWGLKGIS Trigger: AGAGATACCTTTCAGACCCCATGGAGAAGCACTCCAGCAGCTACAATCAAGGACGCTACAACCAAGAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS CCA 72 bp | GATCTCCTTTATACAATCCAAGTGACAGTTGCAGAGTaGACAAACTGTGCCAGTCTGATGCTTGCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLLYTIQVTVAE*TNCASLMLASG Trigger: CCCTGAGGCAAGCATCAGACTGGCACAGTTTGTCCACTCTGCAACTGTCACTTGGATTGTATAAAGGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153954.8 ENSMUST00000223583.2 |
||
| CDS CAA 90 bp | TTGTTGGAAGGCTGCTTGCAAGCTGACATCAGCAACAGGACTTCTTaGGGATCTGTTGCCACTTTGACATCAGACAGTCCTTTTGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLEGCLQADISNRTS*GSVATLTSDSPFAQ Trigger: TTGGGCAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAAGTCCTGTTGCTGATGTCAGCTTGCAAGCAGCCTTCCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||
| CDS GCA 72 bp | TTTCCCTCACAGGTGGGCACTTCAAAGGTCACCTGTTaGAGCCTAAGATCTCCTTTATACAATCCAAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPSQVGTSKVTC*SLRSPLYNPSD Trigger: GTCACTTGGATTGTATAAAGGAGATCTTAGGCTGCAACAGGTGACCTTTGAAGTGCCCACCTGTGAGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153954.8 ENSMUST00000223583.2 |
||
| CDS CAA 72 bp | ATCAGCAACAGGACTTCTTTGGGATCTGTTGCCACTTaGACATCAGACAGTCCTTTTGCCCAAGCAGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ISNRTSLGSVAT*TSDSPFAQAEE Trigger: TTCCTCTGCTTGGGCAAAAGGACTGTCTGATGTCAAAGTGGCAACAGATCCCAAAGAAGTCCTGTTGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070323.12 ENSMUST00000112656.4 ENSMUST00000223583.2 |
||