Pregenerated sensors for SYNJ2BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090935Ensembl transcript IDs: ENSMUST00000114201.3, ENSMUST00000163402.8, ENSMUST00000164431.2, ENSMUST00000169158.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCCACTTGGCTCTCCTTCACCTCGATGTACTATAGGTCCATTCTaGACTGGTAACCTGTGCTGTACTCTCAGGGACACAGCACATCCC | + |
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Preference number: 1 (lower is better) Translates to: TPLGSPSPRCTIGPF*TGNLCCTLRDTAHP Trigger: GGGATGTGCTGTGTCCCTGAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTATAGTACATCGAGGTGAAGGAGAGCCAAGTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | CAGAGAGAGAGAGCTCCTGACAGTGGTGAATCTCAAGGTTCAGCATaGACCAGTTACCTAGAAGGACAGAGTTGCTGGCTGGCACACACT | + |
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Preference number: 1 (lower is better) Translates to: QRERAPDSGESQGSA*TSYLEGQSCWLAHT Trigger: AGTGTGTGCCAGCCAGCAACTCTGTCCTTCTAGGTAACTGGTTCATGCTGAACCTTGAGATTCACCACTGTCAGGAGCTCTCTCTCTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR CCA 90 bp | TCAGATACAAGAAGGGTAGCAGACACTGGGCCTCCAGAGTGCTGCTaGTCAAGACAAGATGTGGAATGCGTCTTGCCTTCTATGGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: SDTRRVADTGPPECC*SRQDVECVLPSMEL Trigger: AAGCTCCATAGAAGGCAAGACGCATTCCACATCTTGTCTTGACCAGCAGCACTCTGGAGGCCCAGTGTCTGCTACCCTTCTTGTATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | GAAGGCTCAAGTGCCACCTTGAGACATGATCTTTTTCAGATGTCTTaGTGGTTGATTGGGCCCTGCTGCTTCCCATCCCATGCCAATGGA | + |
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Preference number: 1 (lower is better) Translates to: EGSSATLRHDLFQMS*WLIGPCCFPSHANG Trigger: TCCATTGGCATGGGATGGGAAGCAGCAGGGCCCAATCAACCATCAAGACATCTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR GCA 90 bp | GACACTGGGCCTCCAGAGTGCTGCTGGTCAAGACAAGATGTGGAATaGGTCTTGCCTTCTATGGAGCTTACAATGACTCCTGTTACTAAG | + |
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Preference number: 1 (lower is better) Translates to: DTGPPECCWSRQDVE*VLPSMELTMTPVTK Trigger: CTTAGTAACAGGAGTCATTGTAAGCTCCATAGAAGGCAAGACGCATTCCACATCTTGTCTTGACCAGCAGCACTCTGGAGGCCCAGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR GCA 90 bp | AGAGAGTTCATTGGACACACTGGAAGACAGCAAGCATTTCAAAGCTaGTTTCGGTATCTCACGAAGGCCCAAACTGCTACCATGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: REFIGHTGRQQAFQS*FRYLTKAQTATMVR Trigger: CCTCACCATGGTAGCAGTTTGGGCCTTCGTGAGATACCGAAAGCAGCTTTGAAATGCTTGCTGTCTTCCAGTGTGTCCAATGAACTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | TTGGCTATGTGGAGGAGAAAGAATATGGGAGGATGTCAGAGATGGTaGGTGAGAGAGAGAGTTCATTGGACACACTGGAAGACAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: LAMWRRKNMGGCQRW*VRERVHWTHWKTAS Trigger: GCTTGCTGTCTTCCAGTGTGTCCAATGAACTCTCTCTCTCACTCACCATCTCTGACATCCTCCCATATTCTTTCTCCTCCACATAGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | GCATGCCAGCTAAGAGAAAGGTGTCGTCCATGGAGACAGGAAGGCTaGGCTTTTCCTCTTTGGATGATAGCTGAGTTTTTATTGGCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: ACQLRERCRPWRQEG*AFPLWMIAEFLLAV Trigger: GACTGCCAATAAAAACTCAGCTATCATCCAAAGAGGAAAAGCTCAGCCTTCCTGTCTCCATGGACGACACCTTTCTCTTAGCTGGCATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR GCA 90 bp | AAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCAGATaGTCAGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: KTMFHFILCLCIWGR*SESRALDLAQFFIL Trigger: CAGAATGAAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCTGAGCATCTGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR TCA 90 bp | GGAGGGCAGTTCCTTCCCTTAGGCTTTTTGTCTGACACTAGAAACTaGGAATTGTTAAGCAGTTTTGAAGGCTCAAGTGCCACCTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GGQFLPLGFLSDTRN*ELLSSFEGSSATLR Trigger: TCTCAAGGTGGCACTTGAGCCTTCAAAACTGCTTAACAATTCTCAGTTTCTAGTGTCAGACAAAAAGCCTAAGGGAAGGAACTGCCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | GCACTTACTAACCACATATGTTACTGGAGGTTGATCAGTCTGTCCTaGGCACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: ALTNHICYWRLISLS*APRNKTMFHFILCL Trigger: GAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACAGACTGATCAACCTCCAGTAACATATGTGGTTAGTAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR CCA 90 bp | TGTTCTAGACTTTCCTTTCCATTCTCCCCTGATGCCACTACACGATaGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTG | + |
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Preference number: 1 (lower is better) Translates to: CSRLSFPFSPDATTR*LSFSELLTILAGYL Trigger: CAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGCATCAGGGGAGAATGGAAAGGAAAGTCTAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR CCA 90 bp | AAATGTCTCCCTGTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTaGACTGTTCTAGACTTTCCTTTCCATTCTCCCCTGATGCCACTA | + |
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Preference number: 1 (lower is better) Translates to: KCLPVSRVFPEVKYH*TVLDFPFHSPLMPL Trigger: TAGTGGCATCAGGGGAGAATGGAAAGGAAAGTCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATACAGGGAGACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | CTACACAAGCTGAAGCACTTACTAACCACATATGTTACTGGAGGTTaGTCAGTCTGTCCTGAGCACCTAGGAATAAAACAATGTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: LHKLKHLLTTYVTGG*SVCPEHLGIKQCST Trigger: AGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACAGACTGATCAACCTCCAGTAACATATGTGGTTAGTAAGTGCTTCAGCTTGTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR GCA 90 bp | GATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTaGTTATCTTCTATGTTGCTGCACTGTGCTCTGTTTTGGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: DGFPFLNSLQYLLVI*LSSMLLHCALFWMA Trigger: TGCCATCCAAAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | AGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTCATTCTGGCTATTaGAATACCATGGAACATTTCCAACAGAATCTGTACATTTTAACC | + |
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Preference number: 1 (lower is better) Translates to: REQSSGLSPVLHSGY*NTMEHFQQNLYILT Trigger: GGTTAAAATGTACAGATTCTGTTGGAAATGTTCCATGGTATTTCAATAGCCAGAATGAAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR GCA 90 bp | CCAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCCTCAGAAATaGTCACCAAATTTCCTTGCACCCTCTACAAACAAACAAAACTTA | + |
|
Preference number: 1 (lower is better) Translates to: PASLHYTVYSGFPQK*SPNFLAPSTNKQNL Trigger: TAAGTTTTGTTTGTTTGTAGAGGGTGCAAGGAAATTTGGTGAGCATTTCTGAGGAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR TCA 90 bp | CAAGACAAGATGTGGAATGCGTCTTGCCTTCTATGGAGCTTACAATaGCTCCTGTTACTAAGTCAGTTTCAAAAAGTACTGAATGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: QDKMWNASCLLWSLQ*LLLLSQFQKVLNGL Trigger: TAAGCCATTCAGTACTTTTTGAAACTGACTTAGTAACAGGAGTCATTGTAAGCTCCATAGAAGGCAAGACGCATTCCACATCTTGTCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR GCA 90 bp | ACTCCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTaGACTGTGCTCTGTTTTGGATGGCAATATTTTTCTTACTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: TPYNTCWLSAYLLCC*TVLCFGWQYFSYWL Trigger: CAACCAGTAAGAAAAATATTGCCATCCAAAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR GCA 90 bp | ACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTaGTCTGTTTTGGATGGCAATATTTTTCTTACTGGTTGTGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: TILAGYLLIFYVAAL*SVLDGNIFLTGCVY Trigger: ATAAACACAACCAGTAAGAAAAATATTGCCATCCAAAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATCTGGGGCAGATGCTCAGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTTGGAGACAGGAAGGCTaGGCTTTTCCTCTTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LYLGQMLREQSSGLSPVLWRQEG*AFPLWM Trigger: CATCCAAAGAGGAAAAGCTCAGCCTTCCTGTCTCCA...AAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCTGAGCATCTGCCCCAGATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCTGGGGCAGATGCTCAGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTCCTCCAGAGTGCTGCTaGTCAAGACAAGATGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LYLGQMLREQSSGLSPVLPPECC*SRQDVE Trigger: TTCCACATCTTGTCTTGACCAGCAGCACTCTGGAGG...AAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCTGAGCATCTGCCCCAGATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR CCA 90 bp | TCTAATCTGGATGCCTACACGATCCTCTCTAGCTGTCTATCAGTCCTTCTGGTCAAGGGTAGCAGACACTaGGCCTCCAGAGTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SNLDAYTILSSCLSVLLVKGSRH*ASRVLL Trigger: CAGCAGCACTCTGGAGGCCCAGTGTCTGCTACCCTT...GACCAGAAGGACTGATAGACAGCTAGAGAGGATCGTGTAGGCATCCAGATTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGATGTCTTGATGGTTGATTGGGCCCTGCTGCTTCCCATCCCATGCCAATGGGTCAGAGATGGTGAGTaGGAGAGAGAGTTCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: SDVLMVDWALLLPIPCQWVRDGE*EREFIG Trigger: TCCAATGAACTCTCTCTCTCACTCACCATCTCTGAC...CCATTGGCATGGGATGGGAAGCAGCAGGGCCCAATCAACCATCAAGACATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGATGTCTTGATGGTTGATTGGGCCCTGCTGCTTCCCATCCCATGCCAATGGGGATGTCAGAGATGGTaGGTGAGAGAGAGAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SDVLMVDWALLLPIPCQWGCQRW*VRERVH Trigger: ATGAACTCTCTCTCTCACTCACCATCTCTGACATCC...CCATTGGCATGGGATGGGAAGCAGCAGGGCCCAATCAACCATCAAGACATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATCTGGGGCAGATGCTCAGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTTTCCAAGCCCTGAGGTaGATACTAGAAGTAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LYLGQMLREQSSGLSPVLFQALR*ILEVSR Trigger: CCTGCTTACTTCTAGTATTCACCTCAGGGCTTGGAA...AAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCTGAGCATCTGCCCCAGATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCTGCTGCTTCCCATCCCATGCCAATGGATCCTTTAACAGTACTGTAAAATGGAGACAGGAAGGCTaGGCTTTTCCTCTTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: GPCCFPSHANGSFNSTVKWRQEG*AFPLWM Trigger: CATCCAAAGAGGAAAAGCTCAGCCTTCCTGTCTCCA...TTTTACAGTACTGTTAAAGGATCCATTGGCATGGGATGGGAAGCAGCAGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGATGTCTTGATGGTTGATTGGGCCCTGCTGCTTCCCATCCCATGCCAATGGAGAGAGAGAGTTCATTaGACACACTGGAAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: SDVLMVDWALLLPIPCQWRERVH*THWKTA Trigger: TGCTGTCTTCCAGTGTGTCCAATGAACTCTCTCTCT...CCATTGGCATGGGATGGGAAGCAGCAGGGCCCAATCAACCATCAAGACATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCTACAGGAACTCCACTTaGCTCTCCTTCACCTCGATG | + |
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Preference number: 2 (lower is better) Translates to: LTNIPASPASLHYTVYSGYRNST*LSFTSM Trigger: CATCGAGGTGAAGGAGAGCCAAGTGGAGTTCCTGTA...GCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCCTCAGAAATGCTCACCAAAGATGTCTTGATGGTTaGTTGGGCCCTGCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QHLFITLCTQAFLRNAHQRCLDG*LGPAAS Trigger: GGAAGCAGCAGGGCCCAATCAACCATCAAGACATCT...TTGGTGAGCATTTCTGAGGAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAATCAGCTCCTCCTTTCACATAGCACAGCTAGCCATCACAGCATGCCAGCTGGAGGAGAAAGAATATaGGAGGATGTCAGAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: QNQLLLSHSTASHHSMPAGGERI*EDVRDG Trigger: ACCATCTCTGACATCCTCCCATATTCTTTCTCCTCC...AGCTGGCATGCTGTGATGGCTAGCTGTGCTATGTGAAAGGAGGAGCTGATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCAGAAGGACAGAGTTGCTaGCTGGCACACACTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: HLGIKQCSTSYSASVSGAEGQSC*LAHTHL Trigger: GAGATGAGTGTGTGCCAGCCAGCAACTCTGTCCTTC...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR TCA 90 bp | TCTAATCTGGATGCCTACACGATCCTCTCTAGCTGTCTATCAGTCCTTCTGGTCTCTCAAGGTTCAGCATaGACCAGTTACCTAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SNLDAYTILSSCLSVLLVSQGSA*TSYLEG Trigger: TCCTTCTAGGTAACTGGTTCATGCTGAACCTTGAGA...GACCAGAAGGACTGATAGACAGCTAGAGAGGATCGTGTAGGCATCCAGATTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCTTGATTGGGCCCTGCTaGTTCCCATCCCATGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLLIGPC*FPSHAN Trigger: ATTGGCATGGGATGGGAAGCAGCAGGGCCCAATCAA...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTGAGCACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATTCAGAGACCTTGCATaGGGACTGCTAGCTATGAGG | + |
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Preference number: 2 (lower is better) Translates to: CPEHLGIKQCSTSYSASVFRDLA*GLLAMR Trigger: CCTCATAGCTAGCAGTCCTCATGCAAGGTCTCTGAA...TACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCCTCAGAAATGCTCACCAACCTCACCAATATCCCTaGATCTCCAGCATCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QHLFITLCTQAFLRNAHQPHQYP*ISSISS Trigger: TGAAGAGATGCTGGAGATGCAGGGATATTGGTGAGG...TTGGTGAGCATTTCTGAGGAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCTGCTGCTTCCCATCCCATGCCAATGGATCCTTTAACAGTACTGTAAAACTTGTATTGGCTATGTaGAGGAGAAAGAATATGGGA | + |
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Preference number: 2 (lower is better) Translates to: GPCCFPSHANGSFNSTVKLVLAM*RRKNMG Trigger: TCCCATATTCTTTCTCCTCCACATAGCCAATACAAG...TTTTACAGTACTGTTAAAGGATCCATTGGCATGGGATGGGAAGCAGCAGGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATGTCAGAGATGGTGAGTaGGAGAGAGAGTTCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: ATTRWLSFSELLTILAGYVRDGE*EREFIG Trigger: TCCAATGAACTCTCTCTCTCACTCACCATCTCTGAC...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCATTTTAAGGGTTTCCTTCCTAACTGTAACCACAATGTCCCTTTGGATGAAAAACTGCTACCATGGTaGGGGCAAACACTGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LHFKGFLPNCNHNVPLDEKLLPW*GQTLVA Trigger: TGCTACCAGTGTTTGCCCTCACCATGGTAGCAGTTT...TTCATCCAAAGGGACATTGTGGTTACAGTTAGGAAGGAAACCCTTAAAATGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCGAAAACCCATACCAATaGCTTCTCATCCTAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: PISLHLQHLFITLCTQAFENPYQ*LLILTQ Trigger: CTGAGTTAGGATGAGAAGGCATTGGTATGGGTTTTC...GAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCGCAGTTCAGAGACTGTaGGACTCATCTGTATATCCC | + |
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Preference number: 2 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLAVQRL*DSSVYP Trigger: GGGATATACAGATGAGTCCCACAGTCTCTGAACTGC...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCATTTTAAGGGTTTCCTTCCTAACTGTAACCACAATGTCCCTTTGGATGAACCTCACCAATATCCCTaGATCTCCAGCATCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LHFKGFLPNCNHNVPLDEPHQYP*ISSISS Trigger: TGAAGAGATGCTGGAGATGCAGGGATATTGGTGAGG...TTCATCCAAAGGGACATTGTGGTTACAGTTAGGAAGGAAACCCTTAAAATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCTGCCACCTTGAGACATaGTCTTTTTCAGATGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLCHLET*SFSDVL Trigger: CAAGACATCTGAAAAAGATCATGTCTCAAGGTGGCA...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATATTGTTAAGCAGTTTTaGAGGCTCAAGTGCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: ATTRWLSFSELLTILAGYIVKQF*RLKCHL Trigger: AAGGTGGCACTTGAGCCTTCAAAACTGCTTAACAAT...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCATTGTTAAGCAGTTTTaGAGGCTCAAGTGCCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLIVKQF*RLKCHL Trigger: AAGGTGGCACTTGAGCCTTCAAAACTGCTTAACAAT...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCGAAAACCCATACCAATaGCTTCTCATCCTAACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLENPYQ*LLILTQ Trigger: CTGAGTTAGGATGAGAAGGCATTGGTATGGGTTTTC...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATGTAACTTCTCATTCATTCTAAGCAAGGCTTCCCCCACACACACACCACCACTTGTATTGGCTATGTaGAGGAGAAAGAATATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ICNFSFILSKASPTHTPPLVLAM*RRKNMG Trigger: TCCCATATTCTTTCTCCTCCACATAGCCAATACAAG...TGGTGGTGTGTGTGTGGGGGAAGCCTTGCTTAGAATGAATGAGAAGTTACATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAACAAATTGACTTGAGTAGAGATGCCTTACTACAATTTCCCACAGCACTGGCAGTTCAGAGACTGTaGGACTCATCTGTATATCCC | + |
|
Preference number: 2 (lower is better) Translates to: FEQIDLSRDALLQFPTALAVQRL*DSSVYP Trigger: GGGATATACAGATGAGTCCCACAGTCTCTGAACTGC...CAGTGCTGTGGGAAATTGTAGTAAGGCATCTCTACTCAAGTCAATTTGTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGACTTTCCTGATGCCACTACACGATaGCTTTCCTTTTCTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: VSRVFPEVKYHWTVLDFPDATTR*LSFSEL Trigger: GAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGCATC...AGGAAAGTCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATGTTCATTGGACACACTaGAAGACAGCAAGCATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ATTRWLSFSELLTILAGYVHWTH*KTASIS Trigger: TGAAATGCTTGCTGTCTTCCAGTGTGTCCAATGAAC...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTCTTCATTCTGGCTATTGAAATACCATGGAACATTTCCAACAGAATCTGTGGATGTCAGAGATGGTaGGTGAGAGAGAGAGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QFFILAIEIPWNISNRICGCQRW*VRERVH Trigger: ATGAACTCTCTCTCTCACTCACCATCTCTGACATCC...ACAGATTCTGTTGGAAATGTTCCATGGTATTTCAATAGCCAGAATGAAGAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGCAGTTTTGAAGGCTCAAGTGCCACCTTGAGACATGATCTTTTTCAGATGATATATGAGGGAATATaGTCCCCTAGTCCCCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSSFEGSSATLRHDLFQMIYEGI*SPSPPK Trigger: TTTTGGGGGACTAGGGGATCATATTCCCTCATATAT...CATCTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCCTTCAAAACTGCTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR TCA 90 bp | GTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGACTTTCCTTGCCACCTTGAGACATaGTCTTTTTCAGATGTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: VSRVFPEVKYHWTVLDFPCHLET*SFSDVL Trigger: CAAGACATCTGAAAAAGATCATGTCTCAAGGTGGCA...AGGAAAGTCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCACAATGTCCCTTTGGATaGAATATGTGCATTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HLGIKQCSTSYSASVSGAQCPFG*NMCISL Trigger: AAGAGAAATGCACATATTTCATCCAAAGGGACATTG...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCTGAGCACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTAGAAACATGTCATTGTTaGCTGAATTCTAGTCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: CPEHLGIKQCSTSYSASVETCHC*LNSSPT Trigger: TGTGGGACTAGAATTCAGTCAACAATGACATGTTTC...TACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR GCA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCAAAGGCATCAATTTTATaGTACTGTGTGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLGIKQCSTSYSASVSGAKASIL*YCVCVC Trigger: ACACACACACACACAGTAGCATAAAATTGATGCCTT...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR GCA 90 bp | GTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGACTTTCCTTATGTTGCTGCACTGTaGTCTGTTTTGGATGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VSRVFPEVKYHWTVLDFPYVAAL*SVLDGN Trigger: ATTGCCATCCAAAACAGAGCACAGTGCAGCAACATA...AGGAAAGTCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR TCA 90 bp | CACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTGCTTATCTTTGGATGATAGCTaGGTTTTTATTGGCAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HDGFPFLNSLQYLLVICLSLDDS*VFIGSP Trigger: AGGACTGCCAATAAAAACTCAGCTATCATCCAAAGA...TAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCGAAATGTTTCAGTTATaGTCATTCCTTAGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLEMFQL*SFLSTV Trigger: CACAGTGCTAAGGAATGATCATAACTGAAACATTTC...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR GCA 90 bp | CACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTGCTTACTCACCAAATTTCCTTaGACCCTCTACAAACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: HDGFPFLNSLQYLLVICLLTKFP*TLYKQT Trigger: TGTTTGTTTGTAGAGGGTGCAAGGAAATTTGGTGAG...TAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTCTTCATTCTGGCTATTGAAATACCATGGAACATTTCCAACAGAATCTGTAGAGAGAGAGTTCATTaGACACACTGGAAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QFFILAIEIPWNISNRICRERVH*THWKTA Trigger: TGCTGTCTTCCAGTGTGTCCAATGAACTCTCTCTCT...ACAGATTCTGTTGGAAATGTTCCATGGTATTTCAATAGCCAGAATGAAGAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATACCACAATGTCCCTTTaGATGAAATATGTGCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: ATTRWLSFSELLTILAGYTTMSL*MKYVHF Trigger: GAAATGCACATATTTCATCCAAAGGGACATTGTGGT...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCACCTTACAATACTTGCTaGTTATCTGCTTATCTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HLGIKQCSTSYSASVSGAPYNTC*LSAYLL Trigger: TAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCAGCTATTGAAATACCATaGAACATTTCCAACAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: HLGIKQCSTSYSASVSGAAIEIP*NISNRI Trigger: GATTCTGTTGGAAATGTTCCATGGTATTTCAATAGC...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTCTTCATTCTGGCTATTGAAATACCATGGAACATTTCCAACAGAATCTGTATATATGAGGGAATATaGTCCCCTAGTCCCCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QFFILAIEIPWNISNRICIYEGI*SPSPPK Trigger: TTTTGGGGGACTAGGGGATCATATTCCCTCATATAT...ACAGATTCTGTTGGAAATGTTCCATGGTATTTCAATAGCCAGAATGAAGAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGCAGTTTTGAAGGCTCAAGTGCCACCTTGAGACATGATCTTTTTCAGATGAAGGCATCAATTTTATaGTACTGTGTGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSSFEGSSATLRHDLFQMKASIL*YCVCVC Trigger: ACACACACACACACAGTAGCATAAAATTGATGCCTT...CATCTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCCTTCAAAACTGCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTGCTTAACCACAATGTCCCTTTaGATGAAATATGTGCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: HDGFPFLNSLQYLLVICLTTMSL*MKYVHF Trigger: GAAATGCACATATTTCATCCAAAGGGACATTGTGGT...TAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCCTGTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGACCTTACAATACTTGCTaGTTATCTGCTTATCTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: SPCIKSFPRGKVSLDCSRPYNTC*LSAYLL Trigger: TAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG...TCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATACAGGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGTTTGTTTACACTAGCTCCTTTCAATCTTCTTCAGCCTCTGTATCCTCATACTGAAGGTAGAACTTaGGTTACATACTTCTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VCLFTLAPFNLLQPLYPHTEGRT*VTYFFY Trigger: GTAAAAGAAGTATGTAACCCAAGTTCTACCTTCAGT...ATGAGGATACAGAGGCTGAAGAAGATTGAAAGGAGCTAGTGTAAACAAACAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114201.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTACTGAAGGTAGAACTTaGGTTACATACTTCTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: PLYPHLASYQVILLSFHFTEGRT*VTYFFY Trigger: GTAAAAGAAGTATGTAACCCAAGTTCTACCTTCAGT...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| 3UTR GCA 72 bp | ACAAGAAGGGTAGCAGACACTGGGCCTCCAGAGTGCTaGTGGTCAAGACAAGATGTGGAATGCGTCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRRVADTGPPEC*WSRQDVECVLP Trigger: AGGCAAGACGCATTCCACATCTTGTCTTGACCAGCAGCACTCTGGAGGCCCAGTGTCTGCTACCCTTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | GATACAAGAAGGGTAGCAGACACTGGGCCTCCAGAGTaGTGCTGGTCAAGACAAGATGTGGAATGCGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DTRRVADTGPPE*CWSRQDVECVL Trigger: CAAGACGCATTCCACATCTTGTCTTGACCAGCAGCACTCTGGAGGCCCAGTGTCTGCTACCCTTCTTGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR CCA 72 bp | ACCCATGCCATCAGATACAAGAAGGGTAGCAGACACTaGGCCTCCAGAGTGCTGCTGGTCAAGACAAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: THAIRYKKGSRH*ASRVLLVKTRC Trigger: ACATCTTGTCTTGACCAGCAGCACTCTGGAGGCCCAGTGTCTGCTACCCTTCTTGTATCTGATGGCATGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | TCCTCCTTTCACATAGCACAGCTAGCCATCACAGCATaGCAGCTAAGAGAAAGGTGTCGTCCATGGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SSFHIAQLAITA*QLRERCRPWRQ Trigger: CTGTCTCCATGGACGACACCTTTCTCTTAGCTGGCATGCTGTGATGGCTAGCTGTGCTATGTGAAAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | GGCTCTCCTTCACCTCGATGTACTATAGGTCCATTCTaGACTGGTAACCTGTGCTGTACTCTCAGGGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GSPSPRCTIGPF*TGNLCCTLRDT Trigger: TGTGTCCCTGAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTATAGTACATCGAGGTGAAGGAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
||
| 3UTR TCA 72 bp | AGAGCTCCTGACAGTGGTGAATCTCAAGGTTCAGCATaGACCAGTTACCTAGAAGGACAGAGTTGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RAPDSGESQGSA*TSYLEGQSCWL Trigger: CAGCCAGCAACTCTGTCCTTCTAGGTAACTGGTTCATGCTGAACCTTGAGATTCACCACTGTCAGGAGCTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCGGCTCAAGTGCCACCTaGAGACATGATCTTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PISLHLQHLFITLCTQAFGSSAT*RHDLFQ Trigger: CTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCC...GAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | GCACCTAGGAATAAAACAATGTTCCACTTCATACTCTaGCTCTGTATCTGGGGCAGATGCTCAGAGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: APRNKTMFHFIL*LCIWGRCSESR Trigger: TCTGCTCTCTGAGCATCTGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGCAGTTTTGAAGGCTCAAGTGCCACCTTGAGACATGATCTTTTTCAGATGCTACAGGAACTCCACTaGGCTCTCCTTCACCTCGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSSFEGSSATLRHDLFQMLQELH*ALLHLD Trigger: ATCGAGGTGAAGGAGAGCCAAGTGGAGTTCCTGTAG...CATCTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCCTTCAAAACTGCTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCCTCAGAAATGCTCACCAATCTTTTTCAGATGTCTaGATGGTTGATTGGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QHLFITLCTQAFLRNAHQSFSDV*MVDWAL Trigger: CAGGGCCCAATCAACCATCAAGACATCTGAAAAAGA...TTGGTGAGCATTTCTGAGGAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCCTGTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGAGCTCACCAAATTTCCTaGCACCCTCTACAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPCIKSFPRGKVSLDCSRAHQIS*HPLQTN Trigger: GTTTGTTTGTAGAGGGTGCAAGGAAATTTGGTGAGC...TCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATACAGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATGCTCACCAAATTTCCTaGCACCCTCTACAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ATTRWLSFSELLTILAGYAHQIS*HPLQTN Trigger: GTTTGTTTGTAGAGGGTGCAAGGAAATTTGGTGAGC...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAATCTGGATGCCTACACGATCCTCTCTAGCTGTCTATCAGTCCTTCTGGTCAACCACAATGTCCCTTaGGATGAAATATGTGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SNLDAYTILSSCLSVLLVNHNVP*DEICAF Trigger: AAATGCACATATTTCATCCAAAGGGACATTGTGGTT...GACCAGAAGGACTGATAGACAGCTAGAGAGGATCGTGTAGGCATCCAGATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCATACTATTTCTATTTGTaGCCTGTGGCTAGACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLGIKQCSTSYSASVSGAYYFYL*PVARLS Trigger: GGACAGTCTAGCCACAGGCAACAAATAGAAATAGTA...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCACTTTAAATCTTGTATaGGCTATGTGGAGGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PISLHLQHLFITLCTQAFTLNLV*AMWRRK Trigger: CTTTCTCCTCCACATAGCCAATACAAGATTTAAAGT...GAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGCAGTTTTGAAGGCTCAAGTGCCACCTTGAGACATGATCTTTTTCAGATGCCTAGTCCCCCAAAATaGTCCATTAGAAACCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSSFEGSSATLRHDLFQMPSPPK*SIRNPR Trigger: TCTTGGGTTTCTAATGGACAATTTTGGGGGACTAGG...CATCTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCCTTCAAAACTGCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATTTTAAGGGTTTCCTTCCTAACTGTAACCACAATGTCCCTTTGGATGAACCTAGTCCCCCAAAATaGTCCATTAGAAACCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LHFKGFLPNCNHNVPLDEPSPPK*SIRNPR Trigger: TCTTGGGTTTCTAATGGACAATTTTGGGGGACTAGG...TTCATCCAAAGGGACATTGTGGTTACAGTTAGGAAGGAAACCCTTAAAATGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTGAGCACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATGCTTATCTTCTATGTaGCTGCACTGTGCTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CPEHLGIKQCSTSYSASVCLSSM*LHCALF Trigger: AAACAGAGCACAGTGCAGCAACATAGAAGATAAGCA...TACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR TCA 72 bp | AGCTCTGGACTTAGCCCAGTTCTTCATTCTGGCTATTaGAATACCATGGAACATTTCCAACAGAATCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SSGLSPVLHSGY*NTMEHFQQNLY Trigger: GTACAGATTCTGTTGGAAATGTTCCATGGTATTTCAATAGCCAGAATGAAGAACTGGGCTAAGTCCAGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR TCA 72 bp | CTGAAGCACTTACTAACCACATATGTTACTGGAGGTTaGTCAGTCTGTCCTGAGCACCTAGGAATAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LKHLLTTYVTGG*SVCPEHLGIKQ Trigger: TTGTTTTATTCCTAGGTGCTCAGGACAGACTGATCAACCTCCAGTAACATATGTGGTTAGTAAGTGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATACTTTAAATCTTGTATaGGCTATGTGGAGGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ATTRWLSFSELLTILAGYTLNLV*AMWRRK Trigger: CTTTCTCCTCCACATAGCCAATACAAGATTTAAAGT...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTGCTTAGCACTGTGCTCTGTTTaGGATGGCAATATTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HDGFPFLNSLQYLLVICLALCSV*DGNIFL Trigger: AAGAAAAATATTGCCATCCAAAACAGAGCACAGTGC...TAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCAACTCCTTACAATACTaGCTGGTTATCTGCTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLNSLQY*LVICLS Trigger: AGATAAGCAGATAACCAGCAAGTATTGTAAGGAGTT...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR TCA 72 bp | AACCACATATGTTACTGGAGGTTGATCAGTCTGTCCTaGGCACCTAGGAATAAAACAATGTTCCACTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: NHICYWRLISLS*APRNKTMFHFI Trigger: TATGAAGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACAGACTGATCAACCTCCAGTAACATATGTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR GCA 72 bp | GCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTaGTCTGTTTTGGATGGCAATATTTTTCTTACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: AGYLLIFYVAAL*SVLDGNIFLTG Trigger: ACCAGTAAGAAAAATATTGCCATCCAAAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | CCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTaGTTATCTTCTATGTTGCTGCACTGTGCTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PFLNSLQYLLVI*LSSMLLHCALF Trigger: AAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGACTTTCCTAACCACAATGTCCCTTaGGATGAAATATGTGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: VSRVFPEVKYHWTVLDFPNHNVP*DEICAF Trigger: AAATGCACATATTTCATCCAAAGGGACATTGTGGTT...AGGAAAGTCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR CCA 72 bp | CTTTTCCTCTATTTATGCATGCTCTTACTAGATGATTaGCACCTAACGATTCCCTCTTCTATGAAATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFLYLCMLLLDD*HLTIPSSMKSS Trigger: TGAGGATTTCATAGAAGAGGGAATCGTTAGGTGCCAATCATCTAGTAAGAGCATGCATAAATAGAGGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR TCA 72 bp | ATGCCTTACTACAATTTCCCACAGCACTGTAGCTACTaGGTAACACCAGTTGCTCTACAATTTTTAACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: MPYYNFPQHCSY*VTPVALQFLTN Trigger: ATTAGTTAAAAATTGTAGAGCAACTGGTGTTACTCAGTAGCTACAGTGCTGTGGGAAATTGTAGTAAGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | CTTACCTCTTTAATTCTCCATAAGGCATCAATTTTATaGTACTGTGTGTGTGTGTGTGTGTGTGTATTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LTSLILHKASIL*YCVCVCVCVLL Trigger: CAGTAATACACACACACACACACACACACAGTAGCATAAAATTGATGCCTTATGGAGAATTAAAGAGGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | AATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTaGACTGTGCTCTGTTTTGGATGGCAATATTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NTCWLSAYLLCC*TVLCFGWQYFS Trigger: AGAAAAATATTGCCATCCAAAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR GCA 72 bp | TACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTaGTGCACTGTGCTCTGTTTTGGATGGCAATATTTT | + |
|
Preference number: 3 (lower is better) Translates to: YNTCWLSAYLLC*CTVLCFGWQYF Trigger: AAAATATTGCCATCCAAAACAGAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| 3UTR TCA 72 bp | ACTGATACTGCCATCCATAGTCCAGAGTTTAAATCATaGTTCTCTTTTACCAACTATGTAGTCCTAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDTAIHSPEFKS*FSFTNYVVLGK Trigger: TTTTCCTAGGACTACATAGTTGGTAAAAGAGAATCATGATTTAAACTCTGGACTATGGATGGCAGTATCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR TCA 90 bp | CCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCTCCCACCGACGATGTTaGAGCCCAGCCCCGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PISLHLQHLFITLCTQAFSHRRC*SPAPKV Trigger: GACCTTCGGGGCTGGGCTTCAACATCGTCGGTGGGA...GAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCATCTTATCACCCTCCTaGAGCCGCCCATCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTNIPASPASLHYTVYSGILSPS*SRPSWA Trigger: GGCCCAGGATGGGCGGCTCCAGGAGGGTGATAAGAT...GCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR CCA 90 bp | CTGTATCTGGGGCAGATGCTCAGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTAGGTCTACAGCATCTTaGTGCAGCAGGTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYLGQMLREQSSGLSPVLRSTAS*CSRFFR Trigger: TCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCT...AAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCTGAGCATCTGCCCCAGATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| 3UTR CAA 72 bp | AGGTTCAGCATGAACCAGTTACCTAGAAGGACAGAGTaGCTGGCTGGCACACACTCATCTCACTCCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFSMNQLPRRTE*LAGTHSSHSIR Trigger: TCTTATGGAGTGAGATGAGTGTGTGCCAGCCAGCAACTCTGTCCTTCTAGGTAACTGGTTCATGCTGAACCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACTAGCTCCTTTCAATCTTCTTCAGCCTCTGTATCCTCATTTGGCCTCTTCCCACCGACGATGTTaGAGCCCAGCCCTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTLAPFNLLQPLYPHLASSHRRC*SPALRK Trigger: TTTTCTCAGGGCTGGGCTTCAACATCGTCGGTGGGA...AGAGGCCAAATGAGGATACAGAGGCTGAAGAAGATTGAAAGGAGCTAGTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114201.3 |
||
| CDS-3UTR CCA 90 bp | TCACCTCGATGTACTATAGGTCCATTCTGCACTGGTAACCTGTGCTGTACTCTCAGGTTCTTCAGATCTTaGCCATTTACCCGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRCTIGPFCTGNLCCTLRFFRS*PFTRRS Trigger: GGACCTTCGGGTAAATGGCCAAGATCTGAAGAACCT...GAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTATAGTACATCGAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTGTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGACACGAAGGCCCAAACTaGTACCATGGTGAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPCIKSFPRGKVSLDCSRHEGPN*YHGEGK Trigger: TTTGCCCTCACCATGGTAGCAGTTTGGGCCTTCGTG...TCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATACAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCAGATGCCACTGTCGTTaGAGACATACTGTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTNIPASPASLHYTVYSGRCHCR*RHTVDL Trigger: CAGATCAACAGTATGTCTCCAACGACAGTGGCATCT...GCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTATCTTATCACCCTCCTaGAGCCGCCCATCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLYPHLASYQVILLSFHFILSPS*SRPSWA Trigger: GGCCCAGGATGGGCGGCTCCAGGAGGGTGATAAGAT...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR CCA 90 bp | CACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTATCTGGGGCATACAGGAACTCCACTTaGCTCTCCTTCACCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLGIKQCSTSYSASVSGAYRNST*LSFTSM Trigger: CATCGAGGTGAAGGAGAGCCAAGTGGAGTTCCTGTA...TGCCCCAGATACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACTAGCTCCTTTCAATCTTCTTCAGCCTCTGTATCCTCATTTGGCCTCTTTGGAGACATACTGTTaGTCTGTCCCACCGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: FTLAPFNLLQPLYPHLASLETYC*SVPPTM Trigger: CATCGTCGGTGGGACAGATCAACAGTATGTCTCCAA...AGAGGCCAAATGAGGATACAGAGGCTGAAGAAGATTGAAAGGAGCTAGTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR TCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCTTGGAGACATACTGTTaGTCTGTCCCACCGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLLETYC*SVPPTM Trigger: CATCGTCGGTGGGACAGATCAACAGTATGTCTCCAA...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCTGAGCACCTAGGAATAAAACAATGTTCCACTTCATACTCTGCCTCTGTAAAACTGCTACCATGGTaGGGGCAAACACTGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPEHLGIKQCSTSYSASVKLLPW*GQTLVA Trigger: TGCTACCAGTGTTTGCCCTCACCATGGTAGCAGTTT...TACAGAGGCAGAGTATGAAGTGGAACATTGTTTTATTCCTAGGTGCTCAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR TCA 90 bp | GGTTACATACTTCTTTTACTGATAGGCAGAAATCCTAAAGGACTCCTGCCTATGTTGGAGACATACTGTTaGTCTGTCCCACCGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: GYILLLLIGRNPKGLLPMLETYC*SVPPTM Trigger: CATCGTCGGTGGGACAGATCAACAGTATGTCTCCAA...CATAGGCAGGAGTCCTTTAGGATTTCTGCCTATCAGTAAAAGAAGTATGTAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTTTCAATCTTCTTCAGCCTCTGTATCCTCATTTGGCCTCTTACCAAGTAGATGCCACTGTCGTTaGAGACATACTGTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFQSSSASVSSFGLLPSRCHCR*RHTVDL Trigger: CAGATCAACAGTATGTCTCCAACGACAGTGGCATCT...ACTTGGTAAGAGGCCAAATGAGGATACAGAGGCTGAAGAAGATTGAAAGGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR GCA 90 bp | CCTTACAATACTTGCTGGTTATCTGCTTATCTTCTATGTTGCTGCACTGTGCTCTCTACAGCATCTTGGTaGAGCAGGTTCTTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PYNTCWLSAYLLCCCTVLSTASW*SRFFRS Trigger: AGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGA...GAGCACAGTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTGTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGATCTACAGCATCTTGGTaGAGCAGGTTCTTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPCIKSFPRGKVSLDCSRSTASW*SRFFRS Trigger: AGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGA...TCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATACAGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTACTGATAGGCAGAAATCCTAAAGGACTCCTGCCTATGCTGACAAAGAGATGCCACTGTCGTTaGAGACATACTGTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLIGRNPKGLLPMLTKRCHCR*RHTVDL Trigger: CAGATCAACAGTATGTCTCCAACGACAGTGGCATCT...CTTTGTCAGCATAGGCAGGAGTCCTTTAGGATTTCTGCCTATCAGTAAAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAGTTTTGAAGGCTCAAGTGCCACCTTGAGACATGATCTTTTTCAGATGAGGTCTACAGCATCTTaGTGCAGCAGGTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSFEGSSATLRHDLFQMRSTAS*CSRFFR Trigger: TCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCT...CATCTGAAAAAGATCATGTCTCAAGGTGGCACTTGAGCCTTCAAAACTGCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| CDS-3UTR GCA 90 bp | GGTTACATACTTCTTTTACTGATAGGCAGAAATCCTAAAGGACTCCTGCCTATGTCTACAGCATCTTGGTaGAGCAGGTTCTTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GYILLLLIGRNPKGLLPMSTASW*SRFFRS Trigger: AGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGA...CATAGGCAGGAGTCCTTTAGGATTTCTGCCTATCAGTAAAAGAAGTATGTAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGACTCCTGCCTATGCTGACAAAGGCAATCATAACAGAAGATAAAGTAAAGGTAATACCTACCCTGTaGTGTACTCTCAGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLPMLTKAIITEDKVKVIPTL*CTLRDT Trigger: TGTGTCCCTGAGAGTACAGCACAGGGTAGGTATTAC...CTTTACTTTATCTTCTGTTATGATTGCCTTTGTCAGCATAGGCAGGAGTCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| 3UTR CAA 72 bp | CACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTaGCTGGTTATCTGCTTATCTTCTATGTTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HDGFPFLNSLQY*LVICLSSMLLH Trigger: GTGCAGCAACATAGAAGATAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTAGGTCTACAGCATCTTaGTGCAGCAGGTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLYPHLASYQVILLSFHFRSTAS*CSRFFR Trigger: TCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCT...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTTCTACAGCATCTTGGTaGAGCAGGTTCTTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYPHLASYQVILLSFHFSTASW*SRFFRS Trigger: AGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGA...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| 3UTR CAA 72 bp | GCTCCTTTCAATCTTCTTCAGCCTCTGTATCCTCATTaGGCCTCTTACCAAGTAATTCTACTTTCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APFNLLQPLYPH*ASYQVILLSFH Trigger: ATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGGCTGAAGAAGATTGAAAGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| 3UTR CAA 72 bp | CATCTGTATATCCCAAAGCCTTTTGAACAAATTGACTaGAGTAGAGATGCCTTACTACAATTTCCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLYIPKPFEQID*SRDALLQFPTA Trigger: TGCTGTGGGAAATTGTAGTAAGGCATCTCTACTCAAGTCAATTTGTTCAAAAGGCTTTGGGATATACAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
||
| CDS-3UTR CAA 90 bp | CTGTATCTGGGGCAGATGCTCAGAGAGCAGAGCTCTGGACTTAGCCCAGTTCTTGTCCCACCGACGATGTaGAAGCCCAGCCCCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLGQMLREQSSGLSPVLVPPTM*KPSPEG Trigger: ACCTTCGGGGCTGGGCTTCAACATCGTCGGTGGGAC...AAGAACTGGGCTAAGTCCAGAGCTCTGCTCTCTGAGCATCTGCCCCAGATACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS GCA 90 bp | AAAAGCCTACTGTCCCATATCCAGGTGCAGGTAATACCTACCCTGTaGTGTACTCTCAGGGACACAGCACATCCCGCATTACGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSLLSHIQVQVIPTL*CTLRDTAHPALRKR Trigger: CCTCTTCCGTAATGCGGGATGTGCTGTGTCCCTGAGAGTACAGCACAGGGTAGGTATTACCTGCACCTGGATATGGGACAGTAGGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
||
| CDS GCA 90 bp | CCTTCACCTCGATGTACTATAGGTCCATTCTGCACTGGTAACCTGTaGTGTACTCTCAGGGACACAGCACATCCCGCATTACGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPRCTIGPFCTGNL*CTLRDTAHPALRKR Trigger: CCTCTTCCGTAATGCGGGATGTGCTGTGTCCCTGAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTATAGTACATCGAGGTGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS CCA 90 bp | AGGGACACAGCACATCCCGCATTACGGAAGAGGTCTACAGCATCTTaGTGCAGCAGGTTCTTCAGATCTTGGCCATTTACCGAGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RDTAHPALRKRSTAS*CSRFFRSWPFTERI Trigger: GATCCTCTCGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTCTTCCGTAATGCGGGATGTGCTGTGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114201.3 ENSMUST00000163402.8 ENSMUST00000169158.2 |
||
| CDS GCA 90 bp | GACACAGCACATCCCGCATTACGGAAGAGGTCTACAGCATCTTGGTaGAGCAGGTTCTTCAGATCTTGGCCATTTACCGAGAGGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: DTAHPALRKRSTASW*SRFFRSWPFTERIL Trigger: TAAGATCCTCTCGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTCTTCCGTAATGCGGGATGTGCTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114201.3 ENSMUST00000163402.8 ENSMUST00000169158.2 |
||
| CDS-3UTR CAA 90 bp | TCTAATCTGGATGCCTACACGATCCTCTCTAGCTGTCTATCAGTCCTTCTGGTCGAGGTCTACAGCATCTaGGTGCAGCAGGTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLDAYTILSSCLSVLLVEVYSI*VQQVLQ Trigger: CTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTC...GACCAGAAGGACTGATAGACAGCTAGAGAGGATCGTGTAGGCATCCAGATTAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGACTCCTGCCTATGCTGACAAAGGCAATCATAACAGAAGATAAAGTAAAGGTCCCACCGACGATGTaGAAGCCCAGCCCCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLLPMLTKAIITEDKVKVPPTM*KPSPEG Trigger: ACCTTCGGGGCTGGGCTTCAACATCGTCGGTGGGAC...CTTTACTTTATCTTCTGTTATGATTGCCTTTGTCAGCATAGGCAGGAGTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169158.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCGATGTACTATAGGTCCATTCTGCACTGGTAACCTGTGCTGTACTCTCCAGGTTCTTCAGATCTaGGCCATTTACCCGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SPRCTIGPFCTGNLCCTLQVLQI*AIYPKV Trigger: GACCTTCGGGTAAATGGCCAAGATCTGAAGAACCTG...GAGAGTACAGCACAGGTTACCAGTGCAGAATGGACCTATAGTACATCGAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
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| CDS-3UTR CAA 90 bp | CCAATATCCCTGCATCTCCAGCATCTCTTCATTACACTGTGTACTCAGGCTTTCGTTGGAGACATACTGTaGATCTGTCCCACCGACGAT | + |
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Preference number: 5 (lower is better) Translates to: PISLHLQHLFITLCTQAFVGDIL*ICPTDD Trigger: ATCGTCGGTGGGACAGATCAACAGTATGTCTCCAAC...GAAAGCCTGAGTACACAGTGTAATGAAGAGATGCTGGAGATGCAGGGATATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| CDS-3UTR CAA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATGGTCCTCTCGTCAGGTaGATCTCTTCCTCCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: ATTRWLSFSELLTILAGYGPLVR*ISSSVT Trigger: AGTCACGGAGGAAGAGATCAACCTGACGAGAGGACC...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCTTTCAATCTTCTTCAGCCTCTGTATCCTCATTTGGCCTCTTACCAAGTGTTGGAGACATACTGTaGATCTGTCCCACCGACGAT | + |
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Preference number: 5 (lower is better) Translates to: SSFQSSSASVSSFGLLPSVGDIL*ICPTDD Trigger: ATCGTCGGTGGGACAGATCAACAGTATGTCTCCAAC...ACTTGGTAAGAGGCCAAATGAGGATACAGAGGCTGAAGAAGATTGAAAGGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
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| CDS-3UTR CAA 90 bp | TCTCCCTGTATCAAGAGTTTTCCCAGAGGTAAAGTATCACTGGACTGTTCTAGAGAGGTCTACAGCATCTaGGTGCAGCAGGTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SPCIKSFPRGKVSLDCSREVYSI*VQQVLQ Trigger: CTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTC...TCTAGAACAGTCCAGTGATACTTTACCTCTGGGAAAACTCTTGATACAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTTTACTGATAGGCAGAAATCCTAAAGGACTCCTGCCTATGCTGACAAAGGAGGTCTACAGCATCTaGGTGCAGCAGGTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LLLLIGRNPKGLLPMLTKEVYSI*VQQVLQ Trigger: CTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTC...CTTTGTCAGCATAGGCAGGAGTCCTTTAGGATTTCTGCCTATCAGTAAAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
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| CDS-3UTR CAA 90 bp | CACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTGCTTAGGTCCTCTCGTCAGGTaGATCTCTTCCTCCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: HDGFPFLNSLQYLLVICLGPLVR*ISSSVT Trigger: AGTCACGGAGGAAGAGATCAACCTGACGAGAGGACC...TAAGCAGATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163402.8 ENSMUST00000164431.2 |
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| CDS-3UTR CAA 90 bp | GCCACTACACGATGGCTTTCCTTTTCTGAACTCCTTACAATACTTGCTGGTTATCTACAGGAACTCCACTaGGCTCTCCTTCACCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: ATTRWLSFSELLTILAGYLQELH*ALLHLD Trigger: ATCGAGGTGAAGGAGAGCCAAGTGGAGTTCCTGTAG...ATAACCAGCAAGTATTGTAAGGAGTTCAGAAAAGGAAAGCCATCGTGTAGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163402.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTGTCCCACCGACGATGTaGAAGCCCAGCCCTGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PLYPHLASYQVILLSFHFVPPTM*KPSPEK Trigger: TTTCTCAGGGCTGGGCTTCAACATCGTCGGTGGGAC...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114201.3 |
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| CDS-3UTR CAA 90 bp | TACATACTTCTTTTACTGATAGGCAGAAATCCTAAAGGACTCCTGCCTATGCTGGTTGGAGACATACTGTaGATCTGTCCCACCGACGAT | + |
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Preference number: 5 (lower is better) Translates to: YILLLLIGRNPKGLLPMLVGDIL*ICPTDD Trigger: ATCGTCGGTGGGACAGATCAACAGTATGTCTCCAAC...CAGCATAGGCAGGAGTCCTTTAGGATTTCTGCCTATCAGTAAAAGAAGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
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| CDS-3UTR CAA 90 bp | AGTTTTCTTTCAGAGTCTCACCACATAGTTCAAACTGACTTCTGCTTTCTCCAAGAGGTCTACAGCATCTaGGTGCAGCAGGTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SFLSESHHIVQTDFCFLQEVYSI*VQQVLQ Trigger: CTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTC...TTGGAGAAAGCAGAAGTCAGTTTGAACTATGTGGTGAGACTCTGAAAGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114201.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTGGTCCTCTCGTCAGGTaGATCTCTTCCTCCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: PLYPHLASYQVILLSFHFGPLVR*ISSSVT Trigger: AGTCACGGAGGAAGAGATCAACCTGACGAGAGGACC...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169158.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGTATCCTCATTTGGCCTCTTACCAAGTAATTCTACTTTCTTTCCATTTTCAGGTTCTTCAGATCTaGGCCATTTACCGAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: PLYPHLASYQVILLSFHFQVLQI*AIYRED Trigger: ATCCTCTCGGTAAATGGCCAAGATCTGAAGAACCTG...AAAATGGAAAGAAAGTAGAATTACTTGGTAAGAGGCCAAATGAGGATACAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
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| CDS GCA 72 bp | CTGTCCCATATCCAGGTGCAGGTAATACCTACCCTGTaGTGTACTCTCAGGGACACAGCACATCCCGCATTA | + |
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Preference number: 6 (lower is better) Translates to: LSHIQVQVIPTL*CTLRDTAHPAL Trigger: TAATGCGGGATGTGCTGTGTCCCTGAGAGTACAGCACAGGGTAGGTATTACCTGCACCTGGATATGGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114201.3 ENSMUST00000169158.2 |
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| CDS CAA 90 bp | CAGGGACACAGCACATCCCGCATTACGGAAGAGGTCTACAGCATCTaGGTGCAGCAGGTTCTTCAGATCTTGGCCATTTACCGAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: QGHSTSRITEEVYSI*VQQVLQILAIYRED Trigger: ATCCTCTCGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTCTTCCGTAATGCGGGATGTGCTGTGTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114201.3 ENSMUST00000163402.8 ENSMUST00000169158.2 |
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| CDS GCA 72 bp | CATCCCGCATTACGGAAGAGGTCTACAGCATCTTGGTaGAGCAGGTTCTTCAGATCTTGGCCATTTACCGAG | + |
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Preference number: 6 (lower is better) Translates to: HPALRKRSTASW*SRFFRSWPFTE Trigger: CTCGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTCTTCCGTAATGCGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114201.3 ENSMUST00000163402.8 ENSMUST00000169158.2 |
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| CDS CCA 72 bp | GCACATCCCGCATTACGGAAGAGGTCTACAGCATCTTaGTGCAGCAGGTTCTTCAGATCTTGGCCATTTACC | + |
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Preference number: 6 (lower is better) Translates to: AHPALRKRSTAS*CSRFFRSWPFT Trigger: GGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTCTTCCGTAATGCGGGATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114201.3 ENSMUST00000163402.8 ENSMUST00000169158.2 |
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| CDS CCA 72 bp | TCTACAGCATCTTGGTGCAGCAGGTTCTTCAGATCTTaGCCATTTACCCGAAGGTCCTCTCGTCAGGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: STASWCSRFFRS*PFTRRSSRQVD Trigger: ATCAACCTGACGAGAGGACCTTCGGGTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164431.2 |
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| CDS CAA 72 bp | AGCACATCCCGCATTACGGAAGAGGTCTACAGCATCTaGGTGCAGCAGGTTCTTCAGATCTTGGCCATTTAC | + |
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Preference number: 6 (lower is better) Translates to: STSRITEEVYSI*VQQVLQILAIY Trigger: GTAAATGGCCAAGATCTGAAGAACCTGCTGCACCAAGATGCTGTAGACCTCTTCCGTAATGCGGGATGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114201.3 ENSMUST00000163402.8 ENSMUST00000169158.2 |
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