Pregenerated sensors for SYNGR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007021Ensembl transcript IDs: ENSMUST00000007236.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCCTGGTCCCCAGAGCCCTTGCACCCTGAGCTGGGAGGCAGCTaGACTTCTGACCTAGAGTGGACAGGTGAGTCCCTGGTTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SPWSPEPLHPELGGS*TSDLEWTGESLVGW Trigger: CCAGCCAACCAGGGACTCACCTGTCCACTCTAGGTCAGAAGTCCAGCTGCCTCCCAGCTCAGGGTGCAAGGGCTCTGGGGACCAGGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 90 bp | GGAACTTTGTGGGGACAGTCCAGGCACCAGGGAGGCTACTCCCCTTaGTCCCAGAGGCCCATAGTGGCCACCTTCTCTGTCCTTGGCACG | + |
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Preference number: 1 (lower is better) Translates to: GTLWGQSRHQGGYSP*SQRPIVATFSVLGT Trigger: CGTGCCAAGGACAGAGAAGGTGGCCACTATGGGCCTCTGGGACCAAGGGGAGTAGCCTCCCTGGTGCCTGGACTGTCCCCACAAAGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 90 bp | CTCCCCTTGGTCCCAGAGGCCCATAGTGGCCACCTTCTCTGTCCTTaGCACGGTAGGACCCAGAAAAGGTCTCAGGAGGCCTTGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LPLVPEAHSGHLLCP*HGRTQKRSQEALRP Trigger: AGGCCTCAAGGCCTCCTGAGACCTTTTCTGGGTCCTACCGTGCCAAGGACAGAGAAGGTGGCCACTATGGGCCTCTGGGACCAAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 90 bp | GTGCCCAGGCCCATAGTTGTCTATACCTTCCTGGCCAGAAACACCTaGGCAGGAGCCACACAGAGAGGGGCGGCTTATGGGGGCACTATG | + |
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Preference number: 1 (lower is better) Translates to: VPRPIVVYTFLARNT*AGATQRGAAYGGTM Trigger: CATAGTGCCCCCATAAGCCGCCCCTCTCTGTGTGGCTCCTGCCCAGGTGTTTCTGGCCAGGAAGGTATAGACAACTATGGGCCTGGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 90 bp | CCCTTGCACCCTGAGCTGGGAGGCAGCTGGACTTCTGACCTAGAGTaGACAGGTGAGTCCCTGGTTGGCTGGCCCATAAAAGGAATGCCT | + |
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Preference number: 1 (lower is better) Translates to: PLHPELGGSWTSDLE*TGESLVGWPIKGMP Trigger: AGGCATTCCTTTTATGGGCCAGCCAACCAGGGACTCACCTGTCCACTCTAGGTCAGAAGTCCAGCTGCCTCCCAGCTCAGGGTGCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 90 bp | AGACCTGAAGACTTAATCACAATCACGACACCGACAGGGCTGAGCTaGTCTAGGGATCCTGTAAGAGGAGGGGAGGGAGCCTCTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: RPEDLITITTPTGLS*SRDPVRGGEGASGQ Trigger: CTGTCCAGAGGCTCCCTCCCCTCCTCTTACAGGATCCCTAGAGCAGCTCAGCCCTGTCGGTGTCGTGATTGTGATTAAGTCTTCAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 90 bp | GGCCAGAAACACCTGGGCAGGAGCCACACAGAGAGGGGCGGCTTATaGGGGCACTATGAGATGAGACCTGAAGACTTAATCACAATCACG | + |
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Preference number: 1 (lower is better) Translates to: GQKHLGRSHTERGGL*GHYEMRPEDLITIT Trigger: CGTGATTGTGATTAAGTCTTCAGGTCTCATCTCATAGTGCCCCCATAAGCCGCCCCTCTCTGTGTGGCTCCTGCCCAGGTGTTTCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 90 bp | CCACATGATTGGTCTATGCTACAACGTACAGGGTTGTCATTCAACTaGAACTCCACAGGGAGGCATTTTGTCTGGAAGAATGAGACATGG | + |
|
Preference number: 1 (lower is better) Translates to: PHDWSMLQRTGLSFN*NSTGRHFVWKNETW Trigger: CCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTTGAATGACAACCCTGTACGTTGTAGCATAGACCAATCATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR TCA 90 bp | TCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGTaGAAAGCCAGCTTCAAGCAATGTATGAGTAGTCTGCTATGCACA | + |
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Preference number: 1 (lower is better) Translates to: SGRMRHGNEFGFDLM*KASFKQCMSSLLCT Trigger: TGTGCATAGCAGACTACTCATACATTGCTTGAAGCTGGCTTTTCACATCAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 90 bp | AAAAATTGTAAACATGTTCACTTAAATATCCACATGATTGGTCTATaGTACAACGTACAGGGTTGTCATTCAACTGCAACTCCACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: KNCKHVHLNIHMIGL*YNVQGCHSTATPQG Trigger: TCCCTGTGGAGTTGCAGTTGAATGACAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGAACATGTTTACAATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGAGGGAGCCTCTGGACAGGGTGGACCACCATGTGGAGCCAGGGACATGGGGAGGCTACTCCCCTTaGTCCCAGAGGCCCATAGTG | + |
|
Preference number: 2 (lower is better) Translates to: EGREPLDRVDHHVEPGTWGGYSP*SQRPIV Trigger: CACTATGGGCCTCTGGGACCAAGGGGAGTAGCCTCC...CCATGTCCCTGGCTCCACATGGTGGTCCACCCTGTCCAGAGGCTCCCTCCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CAA 90 bp | ACACCCTGGGCAGATGAGACCTTTAGTCCTCTCCTTGTAAGAGTCTaGTCTTGCCTGGCACCCAGGTACCCAGCTGTCTGTTCCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: TPWADETFSPLLVRV*SCLAPRYPAVCSLG Trigger: CCCTAGGGAACAGACAGCTGGGTACCTGGGTGCCAGGCAAGACAAGACTCTTACAAGGAGAGGACTAAAGGTCTCATCTGCCCAGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR TCA 90 bp | AACTGCAACTCCACAGGGAGGCATTTTGTCTGGAAGAATGAGACATGGCAACGAAGAGCCCTTGCACCCTaGGCTGGGAGGCAGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: NCNSTGRHFVWKNETWQRRALAP*AGRQLD Trigger: GTCCAGCTGCCTCCCAGCTCAGGGTGCAAGGGCTCT...TCGTTGCCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTTATGGGGGCACTATGAGATGAGACCTGAAGACTTAATCACAATCACGACAAGGGGAGGGAGCCTCTaGACAGGGTGGACCACCATG | + |
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Preference number: 2 (lower is better) Translates to: GLWGHYEMRPEDLITITTRGGSL*TGWTTM Trigger: CATGGTGGTCCACCCTGTCCAGAGGCTCCCTCCCCT...TGTCGTGATTGTGATTAAGTCTTCAGGTCTCATCTCATAGTGCCCCCATAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR GCA 90 bp | GGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGGGTCCCCAGAGCCCTTaGACCCTGAGCTGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GILSGRMRHGNEFGFDLMGPQSP*TLSWEA Trigger: TGCCTCCCAGCTCAGGGTGCAAGGGCTCTGGGGACC...CATCAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR CCA 90 bp | AACTGCAACTCCACAGGGAGGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGAGTCCCTGGTTGGCTaGCCCATAAAAGGAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: NCNSTGRHFVWKNETWQRESLVG*PIKGMP Trigger: AGGCATTCCTTTTATGGGCCAGCCAACCAGGGACTC...TCGTTGCCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR CCA 90 bp | GGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGGGGTGGACCACCATGTaGAGCCAGGGACATGGGACT | + |
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Preference number: 2 (lower is better) Translates to: GILSGRMRHGNEFGFDLMGWTTM*SQGHGT Trigger: AGTCCCATGTCCCTGGCTCCACATGGTGGTCCACCC...CATCAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR CCA 90 bp | GGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGCTGGCCAGAAACACCTaGGCAGGAGCCACACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GILSGRMRHGNEFGFDLMLARNT*AGATQR Trigger: TCTCTGTGTGGCTCCTGCCCAGGTGTTTCTGGCCAG...CATCAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR TCA 90 bp | ACATGTTCACTTAAATATCCACATGATTGGTCTATGCTACAACGTACAGGGTTGGGAACGACTCTCCAGTaGCACCCTGGGCAGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: TCSLKYPHDWSMLQRTGLGTTLQ*HPGQMR Trigger: TCTCATCTGCCCAGGGTGTCACTGGAGAGTCGTTCC...CAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CAA 90 bp | AACGTACAGGGTTGTCATTCAACTGCAACTCCACAGGGAGGCATTTaGTCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: NVQGCHSTATPQGGI*SGRMRHGNEFGFDL Trigger: CAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTTGAATGACAACCCTGTACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR TCA 90 bp | AACTGCAACTCCACAGGGAGGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGGTTTTGACTTGATGTaGAAAGCCAGCTTCAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: NCNSTGRHFVWKNETWQRGFDLM*KASFKQ Trigger: TTGCTTGAAGCTGGCTTTTCACATCAAGTCAAAACC...TCGTTGCCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CAA 90 bp | TCACTTAAATATCCACATGATTGGTCTATGCTACAACGTACAGGGTaGTCATTCAACTGCAACTCCACAGGGAGGCATTTTGTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLKYPHDWSMLQRTG*SFNCNSTGRHFVWK Trigger: CTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTTGAATGACAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR-3UTR CAA 90 bp | GAGGGGAGGGAGCCTCTGGACAGGGTGGACCACCATGTGGAGCCAGGGACATGGAGGTCTCAGGAGGCCTaGAGGCCTACGGTGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: EGREPLDRVDHHVEPGTWRSQEA*RPTVVR Trigger: CCTCACCACCGTAGGCCTCAAGGCCTCCTGAGACCT...CCATGTCCCTGGCTCCACATGGTGGTCCACCCTGTCCAGAGGCTCCCTCCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 72 bp | TGGGGACAGTCCAGGCACCAGGGAGGCTACTCCCCTTaGTCCCAGAGGCCCATAGTGGCCACCTTCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: WGQSRHQGGYSP*SQRPIVATFSV Trigger: GACAGAGAAGGTGGCCACTATGGGCCTCTGGGACCAAGGGGAGTAGCCTCCCTGGTGCCTGGACTGTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 72 bp | AGGGGAGGGAGCCTCTGGACAGGGTGGACCACCATGTaGAGCCAGGGACATGGGACTGGGAACAAGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: RGGSLWTGWTTM*SQGHGTGNKGH Trigger: ATGGCCCTTGTTCCCAGTCCCATGTCCCTGGCTCCACATGGTGGTCCACCCTGTCCAGAGGCTCCCTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 72 bp | GTCCCAGAGGCCCATAGTGGCCACCTTCTCTGTCCTTaGCACGGTAGGACCCAGAAAAGGTCTCAGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: VPEAHSGHLLCP*HGRTQKRSQEA Trigger: GGCCTCCTGAGACCTTTTCTGGGTCCTACCGTGCCAAGGACAGAGAAGGTGGCCACTATGGGCCTCTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 72 bp | GACTTAATCACAATCACGACACCGACAGGGCTGAGCTaGTCTAGGGATCCTGTAAGAGGAGGGGAGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: DLITITTPTGLS*SRDPVRGGEGA Trigger: GGCTCCCTCCCCTCCTCTTACAGGATCCCTAGAGCAGCTCAGCCCTGTCGGTGTCGTGATTGTGATTAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CCA 72 bp | CACCTGGGCAGGAGCCACACAGAGAGGGGCGGCTTATaGGGGCACTATGAGATGAGACCTGAAGACTTAATC | + |
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Preference number: 3 (lower is better) Translates to: HLGRSHTERGGL*GHYEMRPEDLI Trigger: GATTAAGTCTTCAGGTCTCATCTCATAGTGCCCCCATAAGCCGCCCCTCTCTGTGTGGCTCCTGCCCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 72 bp | GAGACCTTTAGTCCTCTCCTTGTAAGAGTCTTGTCTTaGCTGGCACCCAGGTACCCAGCTGTCTGTTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: ETFSPLLVRVLS*LAPRYPAVCSL Trigger: TAGGGAACAGACAGCTGGGTACCTGGGTGCCAGGCAAGACAAGACTCTTACAAGGAGAGGACTAAAGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 72 bp | TGGTCTATGCTACAACGTACAGGGTTGTCATTCAACTaGAACTCCACAGGGAGGCATTTTGTCTGGAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: WSMLQRTGLSFN*NSTGRHFVWKN Trigger: ATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTTGAATGACAACCCTGTACGTTGTAGCATAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR TCA 72 bp | ATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGTaGAAAGCCAGCTTCAAGCAATGTATGAGTAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: MRHGNEFGFDLM*KASFKQCMSSL Trigger: CAGACTACTCATACATTGCTTGAAGCTGGCTTTTCACATCAAGTCAAAACCAAACTCGTTGCCATGTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR GCA 72 bp | AAACATGTTCACTTAAATATCCACATGATTGGTCTATaGTACAACGTACAGGGTTGTCATTCAACTGCAACT | + |
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Preference number: 3 (lower is better) Translates to: KHVHLNIHMIGL*YNVQGCHSTAT Trigger: AGTTGCAGTTGAATGACAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGAACATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR GCA 90 bp | GAGGGGAGGGAGCCTCTGGACAGGGTGGACCACCATGTGGAGCCAGGGACATGGCCTAGGCGGAACCGCTaGAGGGCCTTCACGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: EGREPLDRVDHHVEPGTWPRRNR*RAFTVS Trigger: GCTCACCGTGAAGGCCCTGCAGCGGTTCCGCCTAGG...CCATGTCCCTGGCTCCACATGGTGGTCCACCCTGTCCAGAGGCTCCCTCCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTACTCCCCTTGGTCCCAGAGGCCCATAGTGGCCACCTTCTCTGTCCTACCCGCAACAGGGTCTaGGGCCGCCGCGCAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GRLLPLVPEAHSGHLLCPTRNRV*GRRAKL Trigger: GAGCTTTGCGCGGCGGCCCCAGACCCTGTTGCGGGT...AGGACAGAGAAGGTGGCCACTATGGGCCTCTGGGACCAAGGGGAGTAGCCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CAA 72 bp | TGGCACGGTAGGACCCAGAAAAGGTCTCAGGAGGCCTaGAGGCCTACGGTGGTGAGGTGGCCTTCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: WHGRTQKRSQEA*RPTVVRWPSSP Trigger: AGGGCTGGAAGGCCACCTCACCACCGTAGGCCTCAAGGCCTCCTGAGACCTTTTCTGGGTCCTACCGTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CCA 90 bp | AGCCACACAGAGAGGGGCGGCTTATGGGGGCACTATGAGATGAGACCTGAAGACCACACCACTGCCCACTaGGTAGCCTGGGTAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SHTERGGLWGHYEMRPEDHTTAH*VAWVGL Trigger: CAGGCCTACCCAGGCTACCCAGTGGGCAGTGGTGTG...GTCTTCAGGTCTCATCTCATAGTGCCCCCATAAGCCGCCCCTCTCTGTGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CCA 90 bp | CACGGTAGGACCCAGAAAAGGTCTCAGGAGGCCTTGAGGCCTACGGTGGTGAGGGCACCTGGTACCCTTTaGAGCTGGTGTCCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HGRTQKRSQEALRPTVVRAPGTL*SWCPGS Trigger: AGACCCTGGACACCAGCTCCAAAGGGTACCAGGTGC...CCTCACCACCGTAGGCCTCAAGGCCTCCTGAGACCTTTTCTGGGTCCTACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR TCA 90 bp | AGCCACACAGAGAGGGGCGGCTTATGGGGGCACTATGAGATGAGACCTGAAGACGGATGGAGAAGAAGCTaGAAGCGATGGCAGCACGCG | + |
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Preference number: 4 (lower is better) Translates to: SHTERGGLWGHYEMRPEDGWRRS*KRWQHA Trigger: CGCGTGCTGCCATCGCTTTCAGCTTCTTCTCCATCC...GTCTTCAGGTCTCATCTCATAGTGCCCCCATAAGCCGCCCCTCTCTGTGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR TCA 90 bp | GGTGGACCACCATGTGGAGCCAGGGACATGGGACTGGGAACAAGGGCCATAATCGCCCCAGTACCTAGCTaGTCTGTGGCAAAGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GGPPCGARDMGLGTRAIIAPVPS*SVAKRD Trigger: GTCTCTCTTTGCCACAGATCAGCTAGGTACTGGGGC...GATTATGGCCCTTGTTCCCAGTCCCATGTCCCTGGCTCCACATGGTGGTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR GCA 90 bp | CATAAAAGGAATGCCTCCCAGGCCAGTCCACTCCAAGAAGTAGTTTTCTTCTCAGCCGCATCTCCAGCCTaGGCGGTGCCTGGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HKRNASQASPLQEVVFFSAASPA*AVPGPG Trigger: GCCAGGGCCAGGCACCGCGCAGGCTGGAGATGCGGC...TGAGAAGAAAACTACTTCTTGGAGTGGACTGGCCTGGGAGGCATTCCTTTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR TCA 90 bp | AAGGAATGCCTCCCAGGCCAGTCCACTCCAAGAAGTAGTTTTCTTCTCAGGGCCGGTCTCGGACGCTGCTaGTCTGCTGAAAGCGCACGT | + |
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Preference number: 4 (lower is better) Translates to: KECLPGQSTPRSSFLLRAGLGRC*SAESAR Trigger: ACGTGCGCTTTCAGCAGATCAGCAGCGTCCGAGACC...GGCCCTGAGAAGAAAACTACTTCTTGGAGTGGACTGGCCTGGGAGGCATTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCCTTGTAAGAGTCTTGTCTTGCCTGGCACCCAGGTACCCAGCTGTCTGTGTGAAGGGCGGGCTCTaGTATGTTTCTGTACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLLVRVLSCLAPRYPAVCVKGGL*YVSVPS Trigger: GGAGGGTACAGAAACATACCAGAGCCCGCCCTTCAC...ACAGACAGCTGGGTACCTGGGTGCCAGGCAAGACAAGACTCTTACAAGGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CAA 72 bp | GCAGATGAGACCTTTAGTCCTCTCCTTGTAAGAGTCTaGTCTTGCCTGGCACCCAGGTACCCAGCTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ADETFSPLLVRV*SCLAPRYPAVC Trigger: ACAGACAGCTGGGTACCTGGGTGCCAGGCAAGACAAGACTCTTACAAGGAGAGGACTAAAGGTCTCATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCCTTGTAAGAGTCTTGTCTTGCCTGGCACCCAGGTACCCAGCTGTCTGTGTTGTTCGTTGCCACTaGTTGGTGAGGAAACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLLVRVLSCLAPRYPAVCVVRCH*LVRKQK Trigger: CTTCTGTTTCCTCACCAATCAGTGGCAACGAACAAC...ACAGACAGCTGGGTACCTGGGTGCCAGGCAAGACAAGACTCTTACAAGGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR GCA 90 bp | GGCTTATGGGGGCACTATGAGATGAGACCTGAAGACTTAATCACAATCACGACAAGAGAGACATATCGGTaGCTAGGCGGAACCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GLWGHYEMRPEDLITITTRETYR*LGGTAA Trigger: TGCAGCGGTTCCGCCTAGGCACCGATATGTCTCTCT...TGTCGTGATTGTGATTAAGTCTTCAGGTCTCATCTCATAGTGCCCCCATAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CCA 90 bp | GGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGGACGCAGCGCAGTTCTaGACCACTGTCGGAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GILSGRMRHGNEFGFDLMDAAQF*TTVGVH Trigger: GTGAACTCCGACAGTGGTCCAGAACTGCGCTGCGTC...CATCAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR GCA 90 bp | ACATGTTCACTTAAATATCCACATGATTGGTCTATGCTACAACGTACAGGGTTGTACCCTCCACACCACTaGCCACTGGGTAGCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TCSLKYPHDWSMLQRTGLYPPHH*PLGSLG Trigger: ACCCAGGCTACCCAGTGGGCAGTGGTGTGGAGGGTA...CAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGAACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR TCA 90 bp | ACATGTTCACTTAAATATCCACATGATTGGTCTATGCTACAACGTACAGGGTTGTCACGTAGCCCTCGTTaGCAATCGGTCCGAACACCG | + |
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Preference number: 4 (lower is better) Translates to: TCSLKYPHDWSMLQRTGLSRSPR*QSVRTP Trigger: CGGTGTTCGGACCGATTGTCAACGAGGGCTACGTGA...CAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| 3UTR CAA 72 bp | GGTTGTCATTCAACTGCAACTCCACAGGGAGGCATTTaGTCTGGAAGAATGAGACATGGCAACGAGTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GCHSTATPQGGI*SGRMRHGNEFG Trigger: ACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTTGAATGACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR TCA 90 bp | ACATGTTCACTTAAATATCCACATGATTGGTCTATGCTACAACGTACAGGGTTGGTTGCCACTGATTGGTaGGGAAACAGAAGCCTACGA | + |
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Preference number: 4 (lower is better) Translates to: TCSLKYPHDWSMLQRTGLVATDW*GNRSLR Trigger: TCGTAGGCTTCTGTTTCCTCACCAATCAGTGGCAAC...CAACCCTGTACGTTGTAGCATAGACCAATCATGTGGATATTTAAGTGAACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 90 bp | AGCCCAGGTCCAGTAGCACAGCCCGGCGACGGTCTCGGACGCTGCTaGTCTGCTGAAAGCGCACGTCCAGCAGCAAGAAGGCCACGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SPGPVAQPGDGLGRC*SAESARPAARRPRR Trigger: CCTGCGTGGCCTTCTTGCTGCTGGACGTGCGCTTTCAGCAGATCAGCAGCGTCCGAGACCGTCGCCGGGCTGTGCTACTGGACCTGGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 90 bp | TCTGCTGAAAGCGCACGTCCAGCAGCAAGAAGGCCACGCAGGCGATaGAGGCCCCTAGACCTAGTACGACGCCGAAGCGGCAGGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: SAESARPAARRPRRR*RPLDLVRRRSGRLP Trigger: CGGGAGCCTGCCGCTTCGGCGTCGTACTAGGTCTAGGGGCCTTCATCGCCTGCGTGGCCTTCTTGCTGCTGGACGTGCGCTTTCAGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 90 bp | AACACCGCAATAGAAAACACCCAGGACACGACCCGCAACAGGGTCTaGGGCCGCCGCGCAAAGCTCACGGGATCAAAGGCAGCTCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: NTAIENTQDTTRNRV*GRRAKLTGSKAAPA Trigger: TGCGGGAGCTGCCTTTGATCCCGTGAGCTTTGCGCGGCGGCCCCAGACCCTGTTGCGGGTCGTGTCCTGGGTGTTTTCTATTGCGGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 90 bp | GAAAGCGATGGCAGCACGCGCCGCATCTCCAGCCTGCGCGGTGCCTaGCCCTGGCGTTGTTCGTTGCCACTGATTGGTGAGGAAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: ESDGSTRRISSLRGA*PWRCSLPLIGEETE Trigger: TTCTGTTTCCTCACCAATCAGTGGCAACGAACAACGCCAGGGCCAGGCACCGCGCAGGCTGGAGATGCGGCGCGTGCTGCCATCGCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 90 bp | GGTAGCCTGGGTAGGCCTGGGCAGCCCCAGTACCTAGCTGATCTGTaGCAAAGAGAGACATATCGGTGCCTAGGCGGAACCGCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GSLGRPGQPQYLADL*QRETYRCLGGTAAG Trigger: CCCTGCAGCGGTTCCGCCTAGGCACCGATATGTCTCTCTTTGCCACAGATCAGCTAGGTACTGGGGCTGCCCAGGCCTACCCAGGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CAA 90 bp | CACGGTAGGACCCAGAAAAGGTCTCAGGAGGCCTTGAGGCCTACGGTGGTGAGGGGCACCTGGTACCCTTaGGAGCTGGTGTCCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: HGRTQKRSQEALRPTVVRGTWYP*ELVSRV Trigger: GACCCTGGACACCAGCTCCAAAGGGTACCAGGTGCC...CCTCACCACCGTAGGCCTCAAGGCCTCCTGAGACCTTTTCTGGGTCCTACCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 90 bp | CTAGACCTAGTACGACGCCGAAGCGGCAGGCTCCCGCATTTCCGTTaGAGACGCAGCGCAGTTCTGGACCACTGTCGGAGTTCACGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LDLVRRRSGRLPHFR*RRSAVLDHCRSSRS Trigger: GCTACGTGAACTCCGACAGTGGTCCAGAACTGCGCTGCGTCTTCAACGGAAATGCGGGAGCCTGCCGCTTCGGCGTCGTACTAGGTCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 90 bp | AGGCAGGCACCTGGTACCCTTTGGAGCTGGTGTCCAGGGTCTCAGTaGAGGGCGGGCTCTGGTATGTTTCTGTACCCTCCACACCACTGC | + |
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Preference number: 5 (lower is better) Translates to: RQAPGTLWSWCPGSQ*RAGSGMFLYPPHHC Trigger: GCAGTGGTGTGGAGGGTACAGAAACATACCAGAGCCCGCCCTTCACTGAGACCCTGGACACCAGCTCCAAAGGGTACCAGGTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 90 bp | GAAGCGGCAGGCTCCCGCATTTCCGTTGAAGACGCAGCGCAGTTCTaGACCACTGTCGGAGTTCACGTAGCCCTCGTTGACAATCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: EAAGSRISVEDAAQF*TTVGVHVALVDNRS Trigger: GGACCGATTGTCAACGAGGGCTACGTGAACTCCGACAGTGGTCCAGAACTGCGCTGCGTCTTCAACGGAAATGCGGGAGCCTGCCGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CAA 90 bp | AACTGCAACTCCACAGGGAGGCATTTTGTCTGGAAGAATGAGACATGGCAACGACCCTGGCGTTGTTCGTaGCCACTGATTGGTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: NCNSTGRHFVWKNETWQRPWRCS*PLIGEE Trigger: TTCCTCACCAATCAGTGGCAACGAACAACGCCAGGG...TCGTTGCCATGTCTCATTCTTCCAGACAAAATGCCTCCCTGTGGAGTTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS-3UTR CAA 90 bp | GGCATTTTGTCTGGAAGAATGAGACATGGCAACGAGTTTGGTTTTGACTTGATGGCTCCCGCATTTCCGTaGAAGACGCAGCGCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GILSGRMRHGNEFGFDLMAPAFP*KTQRSS Trigger: AGAACTGCGCTGCGTCTTCAACGGAAATGCGGGAGC...CATCAAGTCAAAACCAAACTCGTTGCCATGTCTCATTCTTCCAGACAAAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS GCA 72 bp | CTGAAAGCGATGGCAGCACGCGCCGCATCTCCAGCCTaGGCGGTGCCTGGCCCTGGCGTTGTTCGTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LKAMAARAASPA*AVPGPGVVRCH Trigger: GTGGCAACGAACAACGCCAGGGCCAGGCACCGCGCAGGCTGGAGATGCGGCGCGTGCTGCCATCGCTTTCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 72 bp | GGCAGCACGCGCCGCATCTCCAGCCTGCGCGGTGCCTaGCCCTGGCGTTGTTCGTTGCCACTGATTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSTRRISSLRGA*PWRCSLPLIGE Trigger: CTCACCAATCAGTGGCAACGAACAACGCCAGGGCCAGGCACCGCGCAGGCTGGAGATGCGGCGCGTGCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 72 bp | AGCGCACGTCCAGCAGCAAGAAGGCCACGCAGGCGATaGAGGCCCCTAGACCTAGTACGACGCCGAAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SARPAARRPRRR*RPLDLVRRRSG Trigger: GCCGCTTCGGCGTCGTACTAGGTCTAGGGGCCTTCATCGCCTGCGTGGCCTTCTTGCTGCTGGACGTGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 72 bp | CCAGTAGCACAGCCCGGCGACGGTCTCGGACGCTGCTaGTCTGCTGAAAGCGCACGTCCAGCAGCAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PVAQPGDGLGRC*SAESARPAARR Trigger: CCTTCTTGCTGCTGGACGTGCGCTTTCAGCAGATCAGCAGCGTCCGAGACCGTCGCCGGGCTGTGCTACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS GCA 72 bp | GCAAAGAGAGACATATCGGTGCCTAGGCGGAACCGCTaGAGGGCCTTCACGGTGAGCGCCACCCAGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AKRDISVPRRNR*RAFTVSATQLR Trigger: CCTCAGCTGGGTGGCGCTCACCGTGAAGGCCCTGCAGCGGTTCCGCCTAGGCACCGATATGTCTCTCTTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 72 bp | ACGCGCCGCATCTCCAGCCTGCGCGGTGCCTGGCCCTaGCGTTGTTCGTTGCCACTGATTGGTGAGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: TRRISSLRGAWP*RCSLPLIGEET Trigger: TGTTTCCTCACCAATCAGTGGCAACGAACAACGCCAGGGCCAGGCACCGCGCAGGCTGGAGATGCGGCGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 72 bp | GTACGACGCCGAAGCGGCAGGCTCCCGCATTTCCGTTaGAGACGCAGCGCAGTTCTGGACCACTGTCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VRRRSGRLPHFR*RRSAVLDHCRS Trigger: ACTCCGACAGTGGTCCAGAACTGCGCTGCGTCTTCAACGGAAATGCGGGAGCCTGCCGCTTCGGCGTCGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CAA 72 bp | AGTACGACGCCGAAGCGGCAGGCTCCCGCATTTCCGTaGAAGACGCAGCGCAGTTCTGGACCACTGTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: STTPKRQAPAFP*KTQRSSGPLSE Trigger: CTCCGACAGTGGTCCAGAACTGCGCTGCGTCTTCAACGGAAATGCGGGAGCCTGCCGCTTCGGCGTCGTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 72 bp | ATAGAAAACACCCAGGACACGACCCGCAACAGGGTCTaGGGCCGCCGCGCAAAGCTCACGGGATCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IENTQDTTRNRV*GRRAKLTGSKA Trigger: TGCCTTTGATCCCGTGAGCTTTGCGCGGCGGCCCCAGACCCTGTTGCGGGTCGTGTCCTGGGTGTTTTCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 72 bp | GGCTCCCGCATTTCCGTTGAAGACGCAGCGCAGTTCTaGACCACTGTCGGAGTTCACGTAGCCCTCGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GSRISVEDAAQF*TTVGVHVALVD Trigger: GTCAACGAGGGCTACGTGAACTCCGACAGTGGTCCAGAACTGCGCTGCGTCTTCAACGGAAATGCGGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 72 bp | GGTAGGCCTGGGCAGCCCCAGTACCTAGCTGATCTGTaGCAAAGAGAGACATATCGGTGCCTAGGCGGAACC | + |
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Preference number: 6 (lower is better) Translates to: GRPGQPQYLADL*QRETYRCLGGT Trigger: GGTTCCGCCTAGGCACCGATATGTCTCTCTTTGCCACAGATCAGCTAGGTACTGGGGCTGCCCAGGCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS CCA 72 bp | GAGCTGGTGTCCAGGGTCTCAGTGAAGGGCGGGCTCTaGTATGTTTCTGTACCCTCCACACCACTGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: ELVSRVSVKGGL*YVSVPSTPLPT Trigger: AGTGGGCAGTGGTGTGGAGGGTACAGAAACATACCAGAGCCCGCCCTTCACTGAGACCCTGGACACCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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| CDS TCA 72 bp | CCTGGTACCCTTTGGAGCTGGTGTCCAGGGTCTCAGTaGAGGGCGGGCTCTGGTATGTTTCTGTACCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGTLWSWCPGSQ*RAGSGMFLYPP Trigger: TGGAGGGTACAGAAACATACCAGAGCCCGCCCTTCACTGAGACCCTGGACACCAGCTCCAAAGGGTACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007236.5 |
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