Pregenerated sensors for SYNGR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048277Ensembl transcript IDs: ENSMUST00000026649.14, ENSMUST00000120928.2, ENSMUST00000175737.2, ENSMUST00000177131.8
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCCTCTGCCTGTCCCACGGTTGGCAGGCAGCCTGGGGACAATTaGCACAGTGGTGACCCCAGAAGACACAGCAGAGAGCTGGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: CPSACPTVGRQPGDN*HSGDPRRHSRELAP Trigger: AGGAGCCAGCTCTCTGCTGTGTCTTCTGGGGTCACCACTGTGCCAATTGTCCCCAGGCTGCCTGCCAACCGTGGGACAGGCAGAGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR GCA 90 bp | TCCTGCCAGGAGCGGGAGAAAGAAGGAAGTGGCATCTTGTCCCTCTaGCTGTCCCACGGTTGGCAGGCAGCCTGGGGACAATTGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: SCQEREKEGSGILSL*LSHGWQAAWGQLAQ Trigger: CTGTGCCAATTGTCCCCAGGCTGCCTGCCAACCGTGGGACAGGCAGAGGGACAAGATGCCACTTCCTTCTTTCTCCCGCTCCTGGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR CCA 90 bp | GGGACAATTGGCACAGTGGTGACCCCAGAAGACACAGCAGAGAGCTaGCTCCTGAACCTGAGTGAGGACGTGGGGAGACAGGCACGAGGA | + |
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Preference number: 1 (lower is better) Translates to: GTIGTVVTPEDTAES*LLNLSEDVGRQARG Trigger: TCCTCGTGCCTGTCTCCCCACGTCCTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTCTTCTGGGGTCACCACTGTGCCAATTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR CCA 90 bp | AAAGATCTAGTCAAAACCATCTCAAAAATGCCCTTGAGGATTGGGTaGGCGGCGGCGAAGCCCAGCTGGGCATGGGCACTTCAGGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: KDLVKTISKMPLRIG*AAAKPSWAWALQVC Trigger: GCACACCTGAAGTGCCCATGCCCAGCTGGGCTTCGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGACTAGATCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGCGGCGAAGCCCAGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCCAGGTGTGCTCTGTCTaGAGCTGGGAGGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: AAAKPSWAWALQVCSVCSQVCSV*SWEAER Trigger: CCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTG...GCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTGGGCTTCGCCGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCGGCGAAGCCCAGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTTCTCAAAAATGCCCTTaGGGATTGGGTGGGCGGCGG | + |
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Preference number: 2 (lower is better) Translates to: RRRSPAGHGHFRCALSAASQKCP*GLGGRR Trigger: CCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGA...AGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTGGGCTTCGCCGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGAAGCCCAGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGATGCTCTGTCTGCAGCTaGGAGGCAGAAAGGCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GEAQLGMGTSGVLCLQLGCSVCS*EAERRG Trigger: TCCACGCCTTTCTGCCTCCCAGCTGCAGACAGAGCA...TCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTGGGCTTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGCGCAGGTGTGCTCTGTCTaGAGCTGGGAGGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LGMGTSGVLCLQLGGRKAQVCSV*SWEAER Trigger: CCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTG...CGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGGTGACCCCAGAAGACACAGCAGAGAGCTGGCTCCTGAACCTGAGTGAGAATGCCCTTGAGGATTaGGTGGGCGGCGGCGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TVVTPEDTAESWLLNLSENALED*VGGGEA Trigger: GGCTTCGCCGCCGCCCACCCAATCCTCAAGGGCATT...CTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTCTTCTGGGGTCACCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR CAA 90 bp | GGAGAAAGAAGGAAGTGGCATCTTGTCCCTCTGCCTGTCCCACGGTaGGCAGGCAGCCTGGGGACAATTGGCACAGTGGTGACCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GERRKWHLVPLPVPR*AGSLGTIGTVVTPE Trigger: TTCTGGGGTCACCACTGTGCCAATTGTCCCCAGGCTGCCTGCCAACCGTGGGACAGGCAGAGGGACAAGATGCCACTTCCTTCTTTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGTGACCCCAGAAGACACAGCAGAGAGCTGGCTCCTGAACCTGAGTGAGTCTCAAAAATGCCCTTaGGGATTGGGTGGGCGGCGG | + |
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Preference number: 2 (lower is better) Translates to: TVVTPEDTAESWLLNLSESQKCP*GLGGRR Trigger: CCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGA...CTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTCTTCTGGGGTCACCACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGAAGGCGTGGACTCTTTaGCTGTCAACTGTAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: QLGMGTSGVLCLQLGGRKKAWTL*LSTVTG Trigger: GCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTT...CTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAAGGAAGTGGCATCTTGTCCCTCTGCCTGTCCCACGGTTGGCAGGCAGGACACAGCAGAGAGCTaGCTCCTGAACCTGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RKKEVASCPSACPTVGRQDTAES*LLNLSE Trigger: CTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTC...CTGCCTGCCAACCGTGGGACAGGCAGAGGGACAAGATGCCACTTCCTTCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTAGTCAAAACCATCTCAAAAATGCCCTTGAGGATTGGGTGGGCGGCGGCGAAGCCCAGCTGGGCATaGGCACTTCAGGTGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DLVKTISKMPLRIGWAAAKPSWA*ALQVCS Trigger: AGAGCACACCTGAAGTGCCCATGCCCAGCTGGGCTT...CGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGACTAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAAGGAAGTGGCATCTTGTCCCTCTGCCTGTCCCACGGTTGGCAGGCAGCTTTGGGGAAAGAGTTaGGGCTCCCAGTGGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: RKKEVASCPSACPTVGRQLWGKS*GSQWRN Trigger: GTTTCTCCACTGGGAGCCCCAACTCTTTCCCCAAAG...CTGCCTGCCAACCGTGGGACAGGCAGAGGGACAAGATGCCACTTCCTTCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGGGGCTCCCAGTGGAGAAACTAGCATGGGTCAAAAACATGGTAGCACTATGCTCTGTCTGCAGCTaGGAGGCAGAAAGGCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: ELGLPVEKLAWVKNMVALCSVCS*EAERRG Trigger: TCCACGCCTTTCTGCCTCCCAGCTGCAGACAGAGCA...TAGTGCTACCATGTTTTTGACCCATGCTAGTTTCTCCACTGGGAGCCCCAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCGTGGACTCTTTGGCTGTCAACTGTAACAGGCAAGGGACTACATTGTGAGAAGGCGTGGACTCTTTaGCTGTCAACTGTAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: KAWTLWLSTVTGKGLHCEKAWTL*LSTVTG Trigger: GCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTT...CTCACAATGTAGTCCCTTGCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGGGGACAATTGGCACAGTGGTGACCCCAGAAGACACAGCAGAGAGCTGTCTACAGTACTATGGTaGGGGATAAAAAGATCTAGT | + |
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Preference number: 2 (lower is better) Translates to: QPGDNWHSGDPRRHSRELSTVLW*GIKRSS Trigger: ACTAGATCTTTTTATCCCCCACCATAGTACTGTAGA...CAGCTCTCTGCTGTGTCTTCTGGGGTCACCACTGTGCCAATTGTCCCCAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGCGTGGACTCTTTGGCTGTCAACTGTAACAGGCAAGGGACTACATTGTAAGGCGTGGACTCTTTaGCTGTCAACTGTAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RKAWTLWLSTVTGKGLHCKAWTL*LSTVTG Trigger: GCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTT...ACAATGTAGTCCCTTGCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | AGGATTGGGTGGGCGGCGGCGAAGCCCAGCTGGGCATaGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RIGWAAAKPSWA*ALQVCSVCSWE Trigger: CTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTGGGCTTCGCCGCCGCCCACCCAATCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR GCA 72 bp | CCCAGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTaGAGCTGGGAGGCAGAAAGGCGTGGACTCTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: PSWAWALQVCSV*SWEAERRGLFG Trigger: GCCAAAGAGTCCACGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | GCCTGTCCCACGGTTGGCAGGCAGCCTGGGGACAATTaGCACAGTGGTGACCCCAGAAGACACAGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ACPTVGRQPGDN*HSGDPRRHSRE Trigger: CTCTCTGCTGTGTCTTCTGGGGTCACCACTGTGCCAATTGTCCCCAGGCTGCCTGCCAACCGTGGGACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR CCA 72 bp | GGCACAGTGGTGACCCCAGAAGACACAGCAGAGAGCTaGCTCCTGAACCTGAGTGAGGACGTGGGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: GTVVTPEDTAES*LLNLSEDVGRQ Trigger: CTGTCTCCCCACGTCCTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTCTTCTGGGGTCACCACTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR TCA 72 bp | AGAAGACACAGCAGAGAGCTGGCTCCTGAACCTGAGTaGGGACGTGGGGAGACAGGCACGAGGATCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: RRHSRELAPEPE*GRGETGTRIPK Trigger: CTTGGGGATCCTCGTGCCTGTCTCCCCACGTCCTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR CCA 72 bp | TGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTaGGAGGCAGAAAGGCGTGGACTCTTTGGCTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: WAWALQVCSVCS*EAERRGLFGCQ Trigger: TTGACAGCCAAAGAGTCCACGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | GTCAAAACCATCTCAAAAATGCCCTTGAGGATTGGGTaGGCGGCGGCGAAGCCCAGCTGGGCATGGGCACTT | + |
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Preference number: 3 (lower is better) Translates to: VKTISKMPLRIG*AAAKPSWAWAL Trigger: AAGTGCCCATGCCCAGCTGGGCTTCGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | TCTAGTCAAAACCATCTCAAAAATGCCCTTGAGGATTaGGTGGGCGGCGGCGAAGCCCAGCTGGGCATGGGC | + |
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Preference number: 3 (lower is better) Translates to: SSQNHLKNALED*VGGGEAQLGMG Trigger: GCCCATGCCCAGCTGGGCTTCGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGACTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | GGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGCGTaGACTCTTTGGCTGTCAACTGTAACAGGCAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GVLCLQLGGRKA*TLWLSTVTGKG Trigger: TCCCTTGCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | GGGTTACTAAAAGCAACAAGGAGCTGGGCACACAGCTaGATGGCTGCGCTGGTTAAGCAAATCCAAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: GLLKATRSWAHS*MAALVKQIQAL Trigger: CAGGGCTTGGATTTGCTTAACCAGCGCAGCCATCCAGCTGTGTGCCCAGCTCCTTGTTGCTTTTAGTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR CCA 72 bp | TGTCTGCAGCTGGGAGGCAGAAAGGCGTGGACTCTTTaGCTGTCAACTGTAACAGGCAAGGGACTACATTGT | + |
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Preference number: 3 (lower is better) Translates to: CLQLGGRKAWTL*LSTVTGKGLHC Trigger: ACAATGTAGTCCCTTGCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTTTCTGCCTCCCAGCTGCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| 3UTR CCA 72 bp | GGGAAAGAGTTGGGGCTCCCAGTGGAGAAACTAGCATaGGTCAAAAACATGGTAGCACTAACAGGCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: GKELGLPVEKLA*VKNMVALTGTC Trigger: GCAGGTGCCTGTTAGTGCTACCATGTTTTTGACCCATGCTAGTTTCTCCACTGGGAGCCCCAACTCTTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| 3UTR TCA 72 bp | ACCGTTTATTCCATCTCCAAACTAGTCTATAGAATCTaGGGGCAGGGCCATCCCCACCAGTCTCCAATACAT | + |
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Preference number: 3 (lower is better) Translates to: TVYSISKLVYRI*GQGHPHQSPIH Trigger: ATGTATTGGAGACTGGTGGGGATGGCCCTGCCCTCAGATTCTATAGACTAGTTTGGAGATGGAATAAACGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCCAGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCTCTCCACATTCTGGGTaGAGGGCGGCTGCTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: EAQLGMGTSGVLCLQLGGSPHSG*RAAAGS Trigger: ACTACCAGCAGCCGCCCTTCACCCAGAATGTGGAGA...GCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCTGGGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGTCTCCACATTCTGGGTaGAGGGCGGCTGCTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SWAWALQVCSVCSWEAERSPHSG*RAAAGS Trigger: ACTACCAGCAGCCGCCCTTCACCCAGAATGTGGAGA...CCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | CTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGCGCCACGTAGTTCTGAATaGAGGCATCCACTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LGMGTSGVLCLQLGGRKAPRSSE*RHPLQP Trigger: AGGCTGGAGTGGATGCCTTCATTCAGAACTACGTGG...CGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 |
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| CDS-3UTR GCA 90 bp | CCCTTGAGAGAAGTCCAGGGTAGAGGGGCGGCCCTCTCCCAACCACCCCTTCCCTTCGGTCAGTGGCATTaGTTATCTGGGAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PLREVQGRGAALSQPPLPFGQWH*LSGRRR Trigger: CCTTCTTCTCCCAGATAAGCAATGCCACTGACCGAA...GGGAAGGGGTGGTTGGGAGAGGGCCGCCCCTCTACCCTGGACTTCTCTCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | GAAGACACAGCAGAGAGCTGGCTCCTGAACCTGAGTGAGGACGTGGGGAGACAGAGAGCAGGTCGCCAATaGCCAGGTACTTTCGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: EDTAESWLLNLSEDVGRQRAGRQ*PGTFGQ Trigger: CTGACCGAAAGTACCTGGTCATTGGCGACCTGCTCT...CTGTCTCCCCACGTCCTCACTCAGGTTCAGGAGCCAGCTCTCTGCTGTGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| CDS-3UTR TCA 90 bp | AGCTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGCCACGTAGTTCTGAATaGAGGCATCCACTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SWAWALQVCSVCSWEAERPRSSE*RHPLQP Trigger: AGGCTGGAGTGGATGCCTTCATTCAGAACTACGTGG...CCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 |
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| CDS-3UTR TCA 90 bp | CTGCAGCTGGGAGGCAGAAAGGCGTGGACTCTTTGGCTGTCAACTGTAACAGGCTCTCCACATTCTGGGTaGAGGGCGGCTGCTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LQLGGRKAWTLWLSTVTGSPHSG*RAAAGS Trigger: ACTACCAGCAGCCGCCCTTCACCCAGAATGTGGAGA...GCCTGTTACAGTTGACAGCCAAAGAGTCCACGCCTTTCTGCCTCCCAGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000177131.8 |
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| CDS-3UTR GCA 90 bp | TGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGCGTTTGAGGTTTGGTGGCTaGCCACTGGTTGGTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: WAWALQVCSVCSWEAERRLRFGG*PLVGQE Trigger: TTCCTGACCAACCAGTGGGCAGCCACCAAACCTCAA...ACGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000177131.8 |
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| CDS-3UTR GCA 90 bp | CAACCCTTGAGAGAAGTCCAGGGTAGAGGGGCGGCCCTCTCCCAACCACCCCTTTTCGGTCAGTGGCATTaGTTATCTGGGAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: QPLREVQGRGAALSQPPLFGQWH*LSGRRR Trigger: CCTTCTTCTCCCAGATAAGCAATGCCACTGACCGAA...AAGGGGTGGTTGGGAGAGGGCCGCCCCTCTACCCTGGACTTCTCTCAAGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | CTGGGCATGGGCACTTCAGGTGTGCTCTGTCTGCAGCTGGGAGGCAGAAAGGCGCATCCTCATTCTGGTTaGACACACAGTATAGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LGMGTSGVLCLQLGGRKAHPHSG*THSIVD Trigger: ATCAACTATACTGTGTGTTCAACCAGAATGAGGATG...CGCCTTTCTGCCTCCCAGCTGCAGACAGAGCACACCTGAAGTGCCCATGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | GAAAGAAGGAAGTGGCATCTTGTCCCTCTGCCTGTCCCACGGTTGGCAGGCAGCCATCCTCATTCTGGTTaGACACACAGTATAGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: ERRKWHLVPLPVPRLAGSHPHSG*THSIVD Trigger: ATCAACTATACTGTGTGTTCAACCAGAATGAGGATG...GCTGCCTGCCAACCGTGGGACAGGCAGAGGGACAAGATGCCACTTCCTTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026649.14 |
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| CDS-3UTR TCA 90 bp | GTTGGGGCTCCCAGTGGAGAAACTAGCATGGGTCAAAAACATGGTAGCACTAACCCACGTAGTTCTGAATaGAGGCATCCACTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VGAPSGETSMGQKHGSTNPRSSE*RHPLQP Trigger: AGGCTGGAGTGGATGCCTTCATTCAGAACTACGTGG...GTTAGTGCTACCATGTTTTTGACCCATGCTAGTTTCTCCACTGGGAGCCCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 |
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| CDS-3UTR GCA 90 bp | GATCTAGTCAAAACCATCTCAAAAATGCCCTTGAGGATTGGGTGGGCGGCGGCGTTCGGTCAGTGGCATTaGTTATCTGGGAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DLVKTISKMPLRIGWAAAFGQWH*LSGRRR Trigger: CCTTCTTCTCCCAGATAAGCAATGCCACTGACCGAA...CGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGACTAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| CDS-3UTR GCA 90 bp | CTAGTCAAAACCATCTCAAAAATGCCCTTGAGGATTGGGTGGGCGGCGGCGAAGTTCGGTCAGTGGCATTaGTTATCTGGGAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LVKTISKMPLRIGWAAAKFGQWH*LSGRRR Trigger: CCTTCTTCTCCCAGATAAGCAATGCCACTGACCGAA...CTTCGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGACTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | GTCAAAACCATCTCAAAAATGCCCTTGAGGATTGGGTGGGCGGCGGCGAAGCCCCATCCTCATTCTGGTTaGACACACAGTATAGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VKTISKMPLRIGWAAAKPHPHSG*THSIVD Trigger: ATCAACTATACTGTGTGTTCAACCAGAATGAGGATG...GGGCTTCGCCGCCGCCCACCCAATCCTCAAGGGCATTTTTGAGATGGTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000175737.2 ENSMUST00000177131.8 |
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| CDS-3UTR TCA 90 bp | CAAATCCAAGCCCTGGGTCCTATCTACAGTACTATGGTGGGGGATAAAAAGATCAGAGCAGGTCGCCAATaGCCAGGTACTTTCGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QIQALGPIYSTMVGDKKIRAGRQ*PGTFGQ Trigger: CTGACCGAAAGTACCTGGTCATTGGCGACCTGCTCT...GATCTTTTTATCCCCCACCATAGTACTGTAGATAGGACCCAGGGCTTGGATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026649.14 ENSMUST00000120928.2 ENSMUST00000177131.8 |
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