Pregenerated sensors for SYNGR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022415

Ensembl transcript IDs: ENSMUST00000009727.12, ENSMUST00000009728.13, ENSMUST00000135727.2, ENSMUST00000143928.2

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GGCAGTAACGCTGCGGGAGGGACCAGGGCACCCAGACAAGAGCTGTaGGCACCAGGGGGCAGAAGTTATCAGGTCAGGGGTAGCACTGGG	+
Preference number: 1 (lower is better) Translates to: GSNAAGGTRAPRQEL*APGGRSYQVRGSTG Trigger: CCCAGTGCTACCCCTGACCTGATAACTTCTGCCCCCTGGTGCCCACAGCTCTTGTCTGGGTGCCCTGGTCCCTCCCGCAGCGTTACTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	TCCCCACCCCAGCTGCACTGGGCTTCAGTGGAGTCACTTGGAGGCTaGGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTGCTT	+
Preference number: 1 (lower is better) Translates to: SPPQLHWASVESLGG*ACARQSHLGGSRVL Trigger: AAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCTGGGGTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR CCA 90 bp	CAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTaGGAGGGAGCAGGGTGCTTGGGAGGGGAGCTAGGATGGAAGGGC	+
Preference number: 1 (lower is better) Translates to: QWSHLEAEHVLGRVT*EGAGCLGGELGWKG Trigger: GCCCTTCCATCCTAGCTCCCCTCCCAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR TCA 90 bp	TTGGGTCAGTGTCCACTACCTCCTGGCCTCCTGTCTACTCAGCCATaGGCAAAGGGCTCAGTGAGCCCTCCAAGAGCCAGGGATGGCCAC	+
Preference number: 1 (lower is better) Translates to: LGQCPLPPGLLSTQP*AKGSVSPPRARDGH Trigger: GTGGCCATCCCTGGCTCTTGGAGGGCTCACTGAGCCCTTTGCTCATGGCTGAGTAGACAGGAGGCCAGGAGGTAGTGGACACTGACCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 90 bp	ACCCTTGGTGACATCACACTAACACGGGTACCAGAAGAGCAAGTCTaGCCGGCAGAGCCCAGTAGGGCATGGGGTGAGGTGGTGGGGACA	+
Preference number: 1 (lower is better) Translates to: TLGDITLTRVPEEQV*PAEPSRAWGEVVGT Trigger: TGTCCCCACCACCTCACCCCATGCCCTACTGGGCTCTGCCGGGCAGACTTGCTCTTCTGGTACCCGTGTTAGTGTGATGTCACCAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	GGGCTCAGTGAGCCCTCCAAGAGCCAGGGATGGCCACCACTCCTTTaGGAAACTGCAAAGGGTGGCTGGCATACCCCAAAGGAGTTCCCT	+
Preference number: 1 (lower is better) Translates to: GLSEPSKSQGWPPLL*ETAKGGWHTPKEFP Trigger: AGGGAACTCCTTTGGGGTATGCCAGCCACCCTTTGCAGTTTCCCAAAGGAGTGGTGGCCATCCCTGGCTCTTGGAGGGCTCACTGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	CCCTGCCGTCCGTTGCTGTCCAGGGAGAAACAGATGGGCAGTCCTTaGGTGTTTAGTACCCACAGGCAGGGAAGGCTTGGGGCTGTGAGT	+
Preference number: 1 (lower is better) Translates to: PCRPLLSREKQMGSP*VFSTHRQGRLGAVS Trigger: ACTCACAGCCCCAAGCCTTCCCTGCCTGTGGGTACTAAACACCCAAGGACTGCCCATCTGTTTCTCCCTGGACAGCAACGGACGGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	TACCTCCTGGCCTCCTGTCTACTCAGCCATGAGCAAAGGGCTCAGTaGGCCCTCCAAGAGCCAGGGATGGCCACCACTCCTTTGGGAAAC	+
Preference number: 1 (lower is better) Translates to: YLLASCLLSHEQRAQ*ALQEPGMATTPLGN Trigger: GTTTCCCAAAGGAGTGGTGGCCATCCCTGGCTCTTGGAGGGCTCACTGAGCCCTTTGCTCATGGCTGAGTAGACAGGAGGCCAGGAGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 90 bp	AGAGATGCCCAAAGCTGGGCAGAGTTTAACCAGCACCCTGCCCTCTaGCTGACATCCCCTGCCGTCCGTTGCTGTCCAGGGAGAAACAGA	+
Preference number: 1 (lower is better) Translates to: RDAQSWAEFNQHPAL*LTSPAVRCCPGRNR Trigger: TCTGTTTCTCCCTGGACAGCAACGGACGGCAGGGGATGTCAGGCAGAGGGCAGGGTGCTGGTTAAACTCTGCCCAGCTTTGGGCATCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	AAGACCAAGACGGAGGAAGGGACTTGCATGAGGAAAGAAAGCAGCTaGGGCAGGGAAGGCCCTCGCTTTGAGGCTGATCACGGGGGTCTC	+
Preference number: 1 (lower is better) Translates to: KTKTEEGTCMRKESS*GREGPRFEADHGGL Trigger: GAGACCCCCGTGATCAGCCTCAAAGCGAGGGCCTTCCCTGCCTCAGCTGCTTTCTTTCCTCATGCAAGTCCCTTCCTCCGTCTTGGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	AGGGAGCCCACTAGGAGAAGACCAAGACGGAGGAAGGGACTTGCATaGGGAAAGAAAGCAGCTGAGGCAGGGAAGGCCCTCGCTTTGAGG	+
Preference number: 1 (lower is better) Translates to: REPTRRRPRRRKGLA*GKKAAEAGKALALR Trigger: CCTCAAAGCGAGGGCCTTCCCTGCCTCAGCTGCTTTCTTTCCTCATGCAAGTCCCTTCCTCCGTCTTGGTCTTCTCCTAGTGGGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 90 bp	CGGACCACTCACCCACCATCTGATATCACTACCATGATGGTGGCATaGATGGGACAAGGGGAGATGCTCAAGACCCGCCTCCTGGTCCCA	+
Preference number: 1 (lower is better) Translates to: RTTHPPSDITTMMVA*MGQGEMLKTRLLVP Trigger: TGGGACCAGGAGGCGGGTCTTGAGCATCTCCCCTTGTCCCATGCATGCCACCATCATGGTAGTGATATCAGATGGTGGGTGAGTGGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	GTTCTTCAGAGGCTCCTACAGGACAGGGACCACAGTCACCCTTGGTaGCATCACACTAACACGGGTACCAGAAGAGCAAGTCTGCCCGGC	+
Preference number: 1 (lower is better) Translates to: VLQRLLQDRDHSHPW*HHTNTGTRRASLPG Trigger: GCCGGGCAGACTTGCTCTTCTGGTACCCGTGTTAGTGTGATGTCACCAAGGGTGACTGTGGTCCCTGTCCTGTAGGAGCCTCTGAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 90 bp	CAGAGAGAGGACAGTGTCCTAGGTGACACAGGGGGCGGGACCACTTaGTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCTC	+
Preference number: 1 (lower is better) Translates to: QREDSVLGDTGGGTT*WVGGANTFRKQGHL Trigger: GAGATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCCCCCTGTGTCACCTAGGACACTGTCCTCTCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	CTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTaGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGG	+
Preference number: 1 (lower is better) Translates to: LTFIDTPHPSCTGLQ*SHLEAEHVLGRVTW Trigger: CCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR CCA 90 bp	GTTCTGGAAACTTCCCGAGGACTCGGAAGGGTTTGTTTCCCTTCCTaGTTTCCCCTTCTGCTCAAGAGGAGCTGCGGGGCTGCTTCTAGG	+
Preference number: 1 (lower is better) Translates to: VLETSRGLGRVCFPS*FPLLLKRSCGAASR Trigger: CCTAGAAGCAGCCCCGCAGCTCCTCTTGAGCAGAAGGGGAAACCAGGAAGGGAAACAAACCCTTCCGAGTCCTCGGGAAGTTTCCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	CCTTGTTGTCCTCTTAGGCCCCGCCCACTTTCCCTTCTGTCTTTGTaGCAACCGGCAAGCCGCTATTCACTTTCCCGTGGCTGGAAGTTT	+
Preference number: 1 (lower is better) Translates to: PCCPLRPRPLSLLSL*QPASRYSLSRGWKF Trigger: AAACTTCCAGCCACGGGAAAGTGAATAGCGGCTTGCCGGTTGCCACAAAGACAGAAGGGAAAGTGGGCGGGGCCTAAGAGGACAACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	CACAGGCAGGGAAGGCTTGGGGCTGTGAGTAGCAAAGACTTTTTGTaGCTTAGGGTGGCACTGCAACATTCCCATAGCCAGTCTCTCCTC	+
Preference number: 1 (lower is better) Translates to: HRQGRLGAVSSKDFL*LRVALQHSHSQSLL Trigger: GAGGAGAGACTGGCTATGGGAATGTTGCAGTGCCACCCTAAGTCACAAAAAGTCTTTGCTACTCACAGCCCCAAGCCTTCCCTGCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	CCTGGTCCCATAAATGTCTCCAGCTTGAGCACTAGGAAGAGTCTATaGGAGATGCCCAAAGCTGGGCAGAGTTTAACCAGCACCCTGCCC	+
Preference number: 1 (lower is better) Translates to: PGPINVSSLSTRKSL*EMPKAGQSLTSTLP Trigger: GGGCAGGGTGCTGGTTAAACTCTGCCCAGCTTTGGGCATCTCTCATAGACTCTTCCTAGTGCTCAAGCTGGAGACATTTATGGGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	TTTCCCGTGGCTGGAAGTTTCTCAACATCTCACGCCTGCGTCATTTaGGGTCATGTGACCTGTGGCTGTGGCACTCATCTTGACCCTGTA	+
Preference number: 1 (lower is better) Translates to: FPVAGSFSTSHACVI*GHVTCGCGTHLDPV Trigger: TACAGGGTCAAGATGAGTGCCACAGCCACAGGTCACATGACCCCAAATGACGCAGGCGTGAGATGTTGAGAAACTTCCAGCCACGGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	ACGAGTAACGCTGAGTGGCAGAGCAGCAGAGGAAGTAAAGAAGGCTaGCAGGAGCTCTATCTGGCCCATCTTAATGTGGCCTCATCAACA	+
Preference number: 1 (lower is better) Translates to: TSNAEWQSSRGSKEG*QELYLAHLNVASST Trigger: TGTTGATGAGGCCACATTAAGATGGGCCAGATAGAGCTCCTGCCAGCCTTCTTTACTTCCTCTGCTGCTCTGCCACTCAGCGTTACTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	GGTAGCACTGGGAGACAGCTAGCCCAGTTCATCCTCCATAAACTCTaGGGACTCCTGCTCATAACCTTCAGGGATCAAAGGACTTATGGG	+
Preference number: 1 (lower is better) Translates to: GSTGRQLAQFILHKL*GLLLITFRDQRTYG Trigger: CCCATAAGTCCTTTGATCCCTGAAGGTTATGAGCAGGAGTCCCCAGAGTTTATGGAGGATGAACTGGGCTAGCTGTCTCCCAGTGCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	GTCCTTGGGTGTTTAGTACCCACAGGCAGGGAAGGCTTGGGGCTGTaGGTAGCAAAGACTTTTTGTGACTTAGGGTGGCACTGCAACATT	+
Preference number: 1 (lower is better) Translates to: VLGCLVPTGREGLGL*VAKTFCDLGWHCNI Trigger: AATGTTGCAGTGCCACCCTAAGTCACAAAAAGTCTTTGCTACTCACAGCCCCAAGCCTTCCCTGCCTGTGGGTACTAAACACCCAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	CAGAAGATGGGGCTCCCAATCTCTCACTCTGTGCATGACCGTGGATaGAATAGGATTCTCTCAAAGGATCTCTGCAGCTCTAAACTCGCA	+
Preference number: 1 (lower is better) Translates to: QKMGLPISHSVHDRG*NRILSKDLCSSKLA Trigger: TGCGAGTTTAGAGCTGCAGAGATCCTTTGAGAGAATCCTATTTCATCCACGGTCATGCACAGAGTGAGAGATTGGGAGCCCCATCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 90 bp	GTCATCTCAGAAGGCAGAAGATGGGGCTCCCAATCTCTCACTCTGTaGATGACCGTGGATGAAATAGGATTCTCTCAAAGGATCTCTGCA	+
Preference number: 1 (lower is better) Translates to: VISEGRRWGSQSLTL*MTVDEIGFSQRISA Trigger: TGCAGAGATCCTTTGAGAGAATCCTATTTCATCCACGGTCATGCACAGAGTGAGAGATTGGGAGCCCCATCTTCTGCCTTCTGAGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 90 bp	TGGGAGCTCTTGCTTACATGGGAAAAGCCTGGGACCCCAAGTCTTTaGAAATCAAGAATCATTACGGACAGATGGAGTAGAGACTGGTGT	+
Preference number: 1 (lower is better) Translates to: WELLLTWEKPGTPSL*KSRIITDRWSRDWC Trigger: ACACCAGTCTCTACTCCATCTGTCCGTAATGATTCTTGATTTTCAAAGACTTGGGGTCCCAGGCTTTTCCCATGTAAGCAAGAGCTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 90 bp	ACTCTTCACTTTATTACTATGTCACCAGAAGTCACCACCTTCACTTaGTCACCACAGATGGATGGATGTCACAGAGGAGGTTGCCTCAGA	+
Preference number: 1 (lower is better) Translates to: TLHFITMSPEVTTFT*SPQMDGCHRGGCLR Trigger: TCTGAGGCAACCTCCTCTGTGACATCCATCCATCTGTGGTGACCAAGTGAAGGTGGTGACTTCTGGTGACATAGTAATAAAGTGAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 90 bp	GCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTGCTaGGGAGGGGAGCTAGGATGGAAGGGCAGGGGCAGGGTAGGCGGT	+
Preference number: 2 (lower is better) Translates to: AEHVLGRVTWEGAGC*GGELGWKGRGRVGG Trigger: ACCGCCTACCCTGCCCCTGCCCTTCCATCCTAGCTCCCCTCCCAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR-3UTR TCA 90 bp	GGGTACCAGAAGAGCAAGTCTGCCCGGCAGAGCCCAGTAGGGCATGGGGTGAGGGGACAGTGTCCTAGGTaGCACAGGGGGCGGGACCAC	+
Preference number: 2 (lower is better) Translates to: GYQKSKSARQSPVGHGVRGQCPR*HRGRDH Trigger: GTGGTCCCGCCCCCTGTGTCACCTAGGACACTGTCC...CCTCACCCCATGCCCTACTGGGCTCTGCCGGGCAGACTTGCTCTTCTGGTACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR TCA 90 bp	GTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGGACATGTCAACTGGACTCACGTCTTaGAGCGCTGCCCTGCCCCCA	+
Preference number: 2 (lower is better) Translates to: VDGVPPRQDGLWTAQDMSTGLTS*SAALPP Trigger: TGGGGGCAGGGCAGCGCTTCAAGACGTGAGTCCAGT...TGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR TCA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGAGCAAAGGGCTCAGTaGGCCCTCCAAGAGCCAGGG	+
Preference number: 2 (lower is better) Translates to: YIPGGRGAAQTRWPVDCAEQRAQ*ALQEPG Trigger: CCCTGGCTCTTGGAGGGCTCACTGAGCCCTTTGCTC...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR TCA 90 bp	CTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCCACCTGCCCTTGTCCCCTCCCTaGCTCTTCCTCAGGCCCGTG	+
Preference number: 2 (lower is better) Translates to: LSSGHCPPSPSRPYLSHLPLSPP*LFLRPV Trigger: CACGGGCCTGAGGAAGAGTCAGGGAGGGGACAAGGG...CAGGTGGCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GCCAGTCTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCGGGGGCGGGACCACTTaGTGGGTGGGTGGAGCCAAT	+
Preference number: 2 (lower is better) Translates to: ASLSSGHCPPSPSRPYLSGGGTT*WVGGAN Trigger: ATTGGCTCCACCCACCCAGCAAGTGGTCCCGCCCCC...GCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAGACTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAACCACACTCACCATGTaGCTGAGCCCCTTGCAGGCA	+
Preference number: 2 (lower is better) Translates to: YIPGGRGAAQTRWPVDCATTLTM*LSPLQA Trigger: TGCCTGCAAGGGGCTCAGCCACATGGTGAGTGTGGT...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 90 bp	GCAGGGTCCGTGGAGAGGGAAAGGAAATCCAGGGTGCTGCTGGCCTaGGGTCCTCCACGGGCTATGTTATGTCTGTGGGGGTGTGATCCC	+
Preference number: 2 (lower is better) Translates to: AGSVERERKSRVLLA*GPPRAMLCLWGCDP Trigger: GGGATCACACCCCCACAGACATAACATAGCCCGTGGAGGACCCAAGGCCAGCAGCACCCTGGATTTCCTTTCCCTCTCCACGGACCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGGACATGTCAGAAAGCTCTCCCCACTaGTCCAGCCTGGAACCTTTG	+
Preference number: 2 (lower is better) Translates to: VDGVPPRQDGLWTAQDMSESSPH*SSLEPL Trigger: CAAAGGTTCCAGGCTGGAGCAGTGGGGAGAGCTTTC...TGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GGGTACCAGAAGAGCAAGTCTGCCCGGCAGAGCCCAGTAGGGCATGGGGTGAGGTGCACTGGGCTTCAGTaGAGTCACTTGGAGGCTGAG	+
Preference number: 2 (lower is better) Translates to: GYQKSKSARQSPVGHGVRCTGLQ*SHLEAE Trigger: CTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCA...CCTCACCCCATGCCCTACTGGGCTCTGCCGGGCAGACTTGCTCTTCTGGTACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GGGTACCAGAAGAGCAAGTCTGCCCGGCAGAGCCCAGTAGGGCATGGGGTGAGGTGGCCACCACTCCTTTaGGAAACTGCAAAGGGTGGC	+
Preference number: 2 (lower is better) Translates to: GYQKSKSARQSPVGHGVRWPPLL*ETAKGG Trigger: GCCACCCTTTGCAGTTTCCCAAAGGAGTGGTGGCCA...CCTCACCCCATGCCCTACTGGGCTCTGCCGGGCAGACTTGCTCTTCTGGTACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGGACATGTCAGGGCATGGGGTGAGGTaGTGGGGACACTCAATTGTT	+
Preference number: 2 (lower is better) Translates to: VDGVPPRQDGLWTAQDMSGHGVR*WGHSIV Trigger: AACAATTGAGTGTCCCCACCACCTCACCCCATGCCC...TGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 90 bp	AGTCTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTaGAGCCACCTGGTCGGGGGCATAGGGCTGTACACAGAGCCCTTT	+
Preference number: 2 (lower is better) Translates to: SLSSGHCPPSPSRPY*SHLVGGIGLYTEPF Trigger: AAAGGGCTCTGTGTACAGCCCTATGCCCCCGACCAGGTGGCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR TCA 90 bp	CTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCCACCTGCCCACATCCTGTGACTaGCCACACTCACCATGTGGC	+
Preference number: 2 (lower is better) Translates to: LSSGHCPPSPSRPYLSHLPTSCD*PHSPCG Trigger: GCCACATGGTGAGTGTGGTCAGTCACAGGATGTGGG...CAGGTGGCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	CAGTTCCATAGGGCATGGCTGTGGGGGACCCTCTCCAAAGAGAATGTGGGAGGATGGGAGGGAGCAGGGTaGTTGGGAGGGGAGCTAGGA	+
Preference number: 2 (lower is better) Translates to: QFHRAWLWGTLSKENVGGWEGAG*LGGELG Trigger: TCCTAGCTCCCCTCCCAAGCACCCTGCTCCCTCCCA...TCCTCCCACATTCTCTTTGGAGAGGGTCCCCCACAGCCATGCCCTATGGAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCCACGTCTTGAAGCGCTaGCCTGCCCCCACCCCCAAC	+
Preference number: 2 (lower is better) Translates to: AGPLAGWVEPIHLGSKVIHVLKR*PAPTPN Trigger: GTTGGGGGTGGGGGCAGGGCAGCGCTTCAAGACGTG...GATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GGCACGGACCCGCTTCCCAGTAACCAGCTACTGTGTACTGGGCACACACAGGAGCCACCCCAGCTGCACTaGGCTTCAGTGGAGTCACTT	+
Preference number: 2 (lower is better) Translates to: GTDPLPSNQLLCTGHTQEPPQLH*ASVESL Trigger: AAGTGACTCCACTGAAGCCCAGTGCAGCTGGGGTGG...CTCCTGTGTGTGCCCAGTACACAGTAGCTGGTTACTGGGAAGCGGGTCCGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GGCACGGACCCGCTTCCCAGTAACCAGCTACTGTGTACTGGGCACACACAGGAGAATGACTGTAACCCCTaGGCCCCACCTGTAGACCCC	+
Preference number: 2 (lower is better) Translates to: GTDPLPSNQLLCTGHTQENDCNP*APPVDP Trigger: GGGGTCTACAGGTGGGGCCCAGGGGTTACAGTCATT...CTCCTGTGTGTGCCCAGTACACAGTAGCTGGTTACTGGGAAGCGGGTCCGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GGGTACCAGAAGAGCAAGTCTGCCCGGCAGAGCCCAGTAGGGCATGGGGTGAGGACTCCTTTGGGAAACTaGAAAGGGTGGCTGGCATAC	+
Preference number: 2 (lower is better) Translates to: GYQKSKSARQSPVGHGVRTPLGN*KGWLAY Trigger: GTATGCCAGCCACCCTTTGCAGTTTCCCAAAGGAGT...CCTCACCCCATGCCCTACTGGGCTCTGCCGGGCAGACTTGCTCTTCTGGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GCCAGTCTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCTCCAAGAGCCAGGGATaGCCACCACTCCTTTGGGAA	+
Preference number: 2 (lower is better) Translates to: ASLSSGHCPPSPSRPYLSSKSQG*PPLLWE Trigger: TTCCCAAAGGAGTGGTGGCCATCCCTGGCTCTTGGA...GCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAGACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAAGAGATGCCCAAAGCTaGGCAGAGTTTAACCAGCAC	+
Preference number: 2 (lower is better) Translates to: YIPGGRGAAQTRWPVDCARDAQS*AEFNQH Trigger: GTGCTGGTTAAACTCTGCCCAGCTTTGGGCATCTCT...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 90 bp	CCTCCTTGTTGTCCTCTTAGGCCCCGCCCACTTTCCCTTCTGTCTTaGTGGCAACCGGCAAGCCGCTATTCACTTTCCCGTGGCTGGAAG	+
Preference number: 2 (lower is better) Translates to: PPCCPLRPRPLSLLS*WQPASRYSLSRGWK Trigger: CTTCCAGCCACGGGAAAGTGAATAGCGGCTTGCCGGTTGCCACAAAGACAGAAGGGAAAGTGGGCGGGGCCTAAGAGGACAACAAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR TCA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGAAGGCTTGGGGCTGTaGGTAGCAAAGACTTTTTGT	+
Preference number: 2 (lower is better) Translates to: YIPGGRGAAQTRWPVDCAEGLGL*VAKTFC Trigger: ACAAAAAGTCTTTGCTACTCACAGCCCCAAGCCTTC...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	ACACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTGGGAGGGAGCAGGGTaGTTGGGAGGGGAGCTAGGA	+
Preference number: 2 (lower is better) Translates to: THLLTFIDTPHPSCTGLQWEGAG*LGGELG Trigger: TCCTAGCTCCCCTCCCAAGCACCCTGCTCCCTCCCA...CTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR-3UTR GCA 90 bp	TGGCACTGCAACATTCCCATAGCCAGTCTCTCCTCTGGTCACTGTCCACCATCCACCACTCCCCACCCCTaGTGGACACACACTTGCTCA	+
Preference number: 2 (lower is better) Translates to: WHCNIPIASLSSGHCPPSTTPHP*WTHTCS Trigger: TGAGCAAGTGTGTGTCCAGCAGGGGTGGGGAGTGGT...GGATGGTGGACAGTGACCAGAGGAGAGACTGGCTATGGGAATGTTGCAGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	CACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTCTAGGCAGAGTCACCTaGGAGGGAGCAGGGTGCTTG	+
Preference number: 2 (lower is better) Translates to: HTCSHLLTLPTPAALGFSLGRVT*EGAGCL Trigger: CAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAG...ACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR-3UTR CCA 90 bp	TGGCACTGCAACATTCCCATAGCCAGTCTCTCCTCTGGTCACTGTCCACCATCCGTGTCCACTACCTCCTaGCCTCCTGTCTACTCAGCC	+
Preference number: 2 (lower is better) Translates to: WHCNIPIASLSSGHCPPSVSTTS*PPVYSA Trigger: GGCTGAGTAGACAGGAGGCCAGGAGGTAGTGGACAC...GGATGGTGGACAGTGACCAGAGGAGAGACTGGCTATGGGAATGTTGCAGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GCCAGTCTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCCCCAGGTGTGAAAAATaGAAGTCAGCAACAGCCAGC	+
Preference number: 2 (lower is better) Translates to: ASLSSGHCPPSPSRPYLSPRCEK*KSATAS Trigger: GCTGGCTGTTGCTGACTTCCATTTTTCACACCTGGG...GCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAGACTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 90 bp	GCAGGCCATGTAGAGCACGGAGCAACACAAAGGGACAAGAGTAGGTaGAGGGAGCCCACTAGGAGAAGACCAAGACGGAGGAAGGGACTT	+
Preference number: 2 (lower is better) Translates to: AGHVEHGATQRDKSR*REPTRRRPRRRKGL Trigger: AAGTCCCTTCCTCCGTCTTGGTCTTCTCCTAGTGGGCTCCCTCAACCTACTCTTGTCCCTTTGTGTTGCTCCGTGCTCTACATGGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCCCACCTGTAGACCCCTaGTGGACACACACTTGCACA	+
Preference number: 2 (lower is better) Translates to: AGPLAGWVEPIHLGSKVIPPVDP*WTHTCT Trigger: TGTGCAAGTGTGTGTCCAGCAGGGGTCTACAGGTGG...GATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	CTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCCACCTGGTTTGTTTCCCTTCCTaGTTTCCCCTTCTGCTCAAG	+
Preference number: 2 (lower is better) Translates to: LSSGHCPPSPSRPYLSHLVCFPS*FPLLLK Trigger: CTTGAGCAGAAGGGGAAACCAGGAAGGGAAACAAAC...CAGGTGGCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCACTTGCACACATATGTaGACACACCCCACCACTCCC	+
Preference number: 2 (lower is better) Translates to: AGPLAGWVEPIHLGSKVITCTHM*THPTTP Trigger: GGGAGTGGTGGGGTGTGTCCACATATGTGTGCAAGT...GATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GGCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCCTGTAGACCCCTGCTaGACACACACTTGCACACAT	+
Preference number: 2 (lower is better) Translates to: GGTTCWVGGANTFRKQGHPVDPC*THTCTH Trigger: ATGTGTGCAAGTGTGTGTCCAGCAGGGGTCTACAGG...ATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GGCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATGGAAGTAAAGAAGGCTaGCAGGAGCTCTATCTGGCC	+
Preference number: 2 (lower is better) Translates to: GGTTCWVGGANTFRKQGHGSKEG*QELYLA Trigger: GGCCAGATAGAGCTCCTGCCAGCCTTCTTTACTTCC...ATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CCA 90 bp	GCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCACGAGTAACGCTGAGTaGCAGAGCAGCAGAGGAAGT	+
Preference number: 2 (lower is better) Translates to: AGPLAGWVEPIHLGSKVITSNAE*QSSRGS Trigger: ACTTCCTCTGCTGCTCTGCCACTCAGCGTTACTCGT...GATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GGCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATACGGAGGAAGGGACTTaGATGAGGAAAGAAAGCAGC	+
Preference number: 2 (lower is better) Translates to: GGTTCWVGGANTFRKQGHTEEGT*MRKESS Trigger: GCTGCTTTCTTTCCTCATGCAAGTCCCTTCCTCCGT...ATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR GCA 90 bp	GGAGTAGAGACTGGTGTCAGTCCCCTGGAAATAAGCCCCTTGATTGCTACATCCACCATGATGGTGGCATaGATGGGACAAGGGGAGATG	+
Preference number: 2 (lower is better) Translates to: GVETGVSPLEISPLIATSTMMVA*MGQGEM Trigger: CATCTCCCCTTGTCCCATGCATGCCACCATCATGGT...GGATGTAGCAATCAAGGGGCTTATTTCCAGGGGACTGACACCAGTCTCTACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 90 bp	GACTCTTCACTTTATTACTATGTCACCAGAAGTCACCACCTTCACTaGGTCACCACAGATGGATGGATGTCACAGAGGAGGTTGCCTCAG	+
Preference number: 2 (lower is better) Translates to: DSSLYYYVTRSHHLH*VTTDGWMSQRRLPQ Trigger: CTGAGGCAACCTCCTCTGTGACATCCATCCATCTGTGGTGACCAAGTGAAGGTGGTGACTTCTGGTGACATAGTAATAAAGTGAAGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CAA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAAGGGGGCGGGACCACTaGCTGGGTGGGTGGAGCCAA	+
Preference number: 3 (lower is better) Translates to: YIPGGRGAAQTRWPVDCARGRDH*LGGWSQ Trigger: TTGGCTCCACCCACCCAGCAAGTGGTCCCGCCCCCT...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	CACCCTGCCCTCTGCCTGACATCCCCTGCCGTCCGTTaGTGTCCAGGGAGAAACAGATGGGCAGTCCTTGGG	+
Preference number: 3 (lower is better) Translates to: HPALCLTSPAVR*CPGRNRWAVLG Trigger: CCCAAGGACTGCCCATCTGTTTCTCCCTGGACAGCAACGGACGGCAGGGGATGTCAGGCAGAGGGCAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	GCCCGGCAGAGCCCAGTAGGGCATGGGGTGAGGTGGTaGGGACACTCAATTGTTAAAGGGCACGGACCCGCT	+
Preference number: 3 (lower is better) Translates to: ARQSPVGHGVRW*GHSIVKGHGPA Trigger: AGCGGGTCCGTGCCCTTTAACAATTGAGTGTCCCCACCACCTCACCCCATGCCCTACTGGGCTCTGCCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	TGCTCAAGAGGAGCTGCGGGGCTGCTTCTAGGCCTCTaGCACCCTTGTCCCCTCCCTGACTCTTCCTCAGGC	+
Preference number: 3 (lower is better) Translates to: CSRGAAGLLLGL*HPCPLPDSSSG Trigger: GCCTGAGGAAGAGTCAGGGAGGGGACAAGGGTGTCAGAGGCCTAGAAGCAGCCCCGCAGCTCCTCTTGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	GGCACACACAGGAGGACAGCACAGACAACCTCCCTCTaGGTCCCCTCTGTCACAGGGAGGGAAGCACCAGGT	+
Preference number: 3 (lower is better) Translates to: GTHRRTAQTTSL*VPSVTGREAPG Trigger: ACCTGGTGCTTCCCTCCCTGTGACAGAGGGGACGCAGAGGGAGGTTGTCTGTGCTGTCCTCCTGTGTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	CACCCTTGTCCCCTCCCTGACTCTTCCTCAGGCCCGTaGTCACGCAACGTTTCCCACCGTAATGGACCCTGT	+
Preference number: 3 (lower is better) Translates to: HPCPLPDSSSGP*SRNVSHRNGPC Trigger: ACAGGGTCCATTACGGTGGGAAACGTTGCGTGAGCACGGGCCTGAGGAAGAGTCAGGGAGGGGACAAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	GGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTaGGCAGGACATGTCATCTCAGAAGGCAGAAGATGG	+
Preference number: 3 (lower is better) Translates to: GRGAAQTRWPVD*AGHVISEGRRW Trigger: CCATCTTCTGCCTTCTGAGATGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	CAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTaGACTGCGCAGGACATGTCATCTCAGAAGGCAGAA	+
Preference number: 3 (lower is better) Translates to: QVDGVPPRQDGL*TAQDMSSQKAE Trigger: TTCTGCCTTCTGAGATGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	TGTCCACTACCTCCTGGCCTCCTGTCTACTCAGCCATaGGCAAAGGGCTCAGTGAGCCCTCCAAGAGCCAGG	+
Preference number: 3 (lower is better) Translates to: CPLPPGLLSTQP*AKGSVSPPRAR Trigger: CCTGGCTCTTGGAGGGCTCACTGAGCCCTTTGCTCATGGCTGAGTAGACAGGAGGCCAGGAGGTAGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	GCGTCCCCTCTGTCACAGGGAGGGAAGCACCAGGTATaGAAATGCCTCCTTGTTGTCCTCTTAGGCCCCGCC	+
Preference number: 3 (lower is better) Translates to: ASPLSQGGKHQV*KCLLVVLLGPA Trigger: GGCGGGGCCTAAGAGGACAACAAGGAGGCATTTTCATACCTGGTGCTTCCCTCCCTGTGACAGAGGGGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	TTCCCTTCCTGGTTTCCCCTTCTGCTCAAGAGGAGCTaGGGGGCTGCTTCTAGGCCTCTGACACCCTTGTCC	+
Preference number: 3 (lower is better) Translates to: FPSWFPLLLKRS*GAASRPLTPLS Trigger: GGACAAGGGTGTCAGAGGCCTAGAAGCAGCCCCGCAGCTCCTCTTGAGCAGAAGGGGAAACCAGGAAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	CCTCTTAGGCCCCGCCCACTTTCCCTTCTGTCTTTGTaGCAACCGGCAAGCCGCTATTCACTTTCCCGTGGC	+
Preference number: 3 (lower is better) Translates to: PLRPRPLSLLSL*QPASRYSLSRG Trigger: GCCACGGGAAAGTGAATAGCGGCTTGCCGGTTGCCACAAAGACAGAAGGGAAAGTGGGCGGGGCCTAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	TCCCCTGCCGTCCGTTGCTGTCCAGGGAGAAACAGATaGGCAGTCCTTGGGTGTTTAGTACCCACAGGCAGG	+
Preference number: 3 (lower is better) Translates to: SPAVRCCPGRNR*AVLGCLVPTGR Trigger: CCTGCCTGTGGGTACTAAACACCCAAGGACTGCCCATCTGTTTCTCCCTGGACAGCAACGGACGGCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	GGGCATGGCTGTGGGGGACCCTCTCCAAAGAGAATGTaGGAGGAAAGCAGGGTCCGTGGAGAGGGAAAGGAA	+
Preference number: 3 (lower is better) Translates to: GHGCGGPSPKRM*EESRVRGEGKE Trigger: TTCCTTTCCCTCTCCACGGACCCTGCTTTCCTCCCACATTCTCTTTGGAGAGGGTCCCCCACAGCCATGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATaGCCTGTGGACTGCGCAGGACATGTCATCTCAGAA	+
Preference number: 3 (lower is better) Translates to: YIPGGRGAAQTR*PVDCAGHVISE Trigger: TTCTGAGATGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	TCGGAAGGGTTTGTTTCCCTTCCTGGTTTCCCCTTCTaGTCAAGAGGAGCTGCGGGGCTGCTTCTAGGCCTC	+
Preference number: 3 (lower is better) Translates to: SEGFVSLPGFPF*SRGAAGLLLGL Trigger: GAGGCCTAGAAGCAGCCCCGCAGCTCCTCTTGAGCAGAAGGGGAAACCAGGAAGGGAAACAAACCCTTCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	AAGCAGGGTCCGTGGAGAGGGAAAGGAAATCCAGGGTaGTGCTGGCCTTGGGTCCTCCACGGGCTATGTTAT	+
Preference number: 3 (lower is better) Translates to: KQGPWRGKGNPG*CWPWVLHGLCY Trigger: ATAACATAGCCCGTGGAGGACCCAAGGCCAGCAGCACCCTGGATTTCCTTTCCCTCTCCACGGACCCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	TGCAAAGGGTGGCTGGCATACCCCAAAGGAGTTCCCTaGAGGCCATGTAGAGCACGGAGCAACACAAAGGGA	+
Preference number: 3 (lower is better) Translates to: CKGWLAYPKGVP*RPCRARSNTKG Trigger: TCCCTTTGTGTTGCTCCGTGCTCTACATGGCCTGCAGGGAACTCCTTTGGGGTATGCCAGCCACCCTTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	GACAGTGTCCTAGGTGACACAGGGGGCGGGACCACTTaGTGGGTGGGTGGAGCCAATACATTTAGGAAGCAA	+
Preference number: 3 (lower is better) Translates to: DSVLGDTGGGTT*WVGGANTFRKQ Trigger: TTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCCCCCTGTGTCACCTAGGACACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	CTCTCCAAAGAGAATGTGGGAGGAAAGCAGGGTCCGTaGAGAGGGAAAGGAAATCCAGGGTGCTGCTGGCCT	+
Preference number: 3 (lower is better) Translates to: LSKENVGGKQGP*RGKGNPGCCWP Trigger: AGGCCAGCAGCACCCTGGATTTCCTTTCCCTCTCCACGGACCCTGCTTTCCTCCCACATTCTCTTTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CAA 90 bp	GCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCAGGGACAAGAGTAGGTaGAGGGAGCCCACTAGGAGA	+
Preference number: 3 (lower is better) Translates to: AGPLAGWVEPIHLGSKVIRDKSR*REPTRR Trigger: TCTCCTAGTGGGCTCCCTCAACCTACTCTTGTCCCT...GATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	CACTTGCTCACATTTATTGACACTCCCCACCCCAGCTaGACTGGGCTTCAGTGGAGTCACTTGGAGGCTGAG	+
Preference number: 3 (lower is better) Translates to: HLLTFIDTPHPS*TGLQWSHLEAE Trigger: CTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR GCA 72 bp	TTTCCCGTGGCTGGAAGTTTCTCAACATCTCACGCCTaGGTCATTTGGGGTCATGTGACCTGTGGCTGTGGC	+
Preference number: 3 (lower is better) Translates to: FPVAGSFSTSHA*VIWGHVTCGCG Trigger: GCCACAGCCACAGGTCACATGACCCCAAATGACGCAGGCGTGAGATGTTGAGAAACTTCCAGCCACGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	ATGGGTCAAAGGTTAGAGGTGTCCCGGGGTGACAAGTaGGAGCTCTTGCTTACATGGGAAAAGCCTGGGACC	+
Preference number: 3 (lower is better) Translates to: MGQRLEVSRGDK*ELLLTWEKPGT Trigger: GGTCCCAGGCTTTTCCCATGTAAGCAAGAGCTCCCACTTGTCACCCCGGGACACCTCTAACCTTTGACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	CTATCAAGGATTCTGGGAATGACAGCCCACATCCTGTaGCTGACCACACTCACCATGTGGCTGAGCCCCTTG	+
Preference number: 3 (lower is better) Translates to: LSRILGMTAHIL*LTTLTMWLSPL Trigger: CAAGGGGCTCAGCCACATGGTGAGTGTGGTCAGTCACAGGATGTGGGCTGTCATTCCCAGAATCCTTGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	AGGCTCCTACAGGACAGGGACCACAGTCACCCTTGGTaGCATCACACTAACACGGGTACCAGAAGAGCAAGT	+
Preference number: 3 (lower is better) Translates to: RLLQDRDHSHPW*HHTNTGTRRAS Trigger: ACTTGCTCTTCTGGTACCCGTGTTAGTGTGATGTCACCAAGGGTGACTGTGGTCCCTGTCCTGTAGGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	CTCGGACCACTCACCCACCATCTGATATCACTACCATaGTGGTGGCATGCATGGGACAAGGGGAGATGCTCA	+
Preference number: 3 (lower is better) Translates to: LGPLTHHLISLP*WWHAWDKGRCS Trigger: TGAGCATCTCCCCTTGTCCCATGCATGCCACCATCATGGTAGTGATATCAGATGGTGGGTGAGTGGTCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	TGGCAACCGGCAAGCCGCTATTCACTTTCCCGTGGCTaGAAGTTTCTCAACATCTCACGCCTGCGTCATTTG	+
Preference number: 3 (lower is better) Translates to: WQPASRYSLSRG*KFLNISRLRHL Trigger: CAAATGACGCAGGCGTGAGATGTTGAGAAACTTCCAGCCACGGGAAAGTGAATAGCGGCTTGCCGGTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	TTTGTGGCAACCGGCAAGCCGCTATTCACTTTCCCGTaGCTGGAAGTTTCTCAACATCTCACGCCTGCGTCA	+
Preference number: 3 (lower is better) Translates to: FVATGKPLFTFP*LEVSQHLTPAS Trigger: TGACGCAGGCGTGAGATGTTGAGAAACTTCCAGCCACGGGAAAGTGAATAGCGGCTTGCCGGTTGCCACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	CCCCAGTCTGGATCCAACTGTAACTCTCTGTGCTCCTaGTTCTGGAAACTTCCCGAGGACTCGGAAGGGTTT	+
Preference number: 3 (lower is better) Translates to: PQSGSNCNSLCS*FWKLPEDSEGF Trigger: AAACCCTTCCGAGTCCTCGGGAAGTTTCCAGAACCAGGAGCACAGAGAGTTACAGTTGGATCCAGACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR-3UTR CAA 90 bp	GGAAGTTTCTCAACATCTCACGCCTGCGTCATTTGGGGTCATGTGACCTGTGGCTCCAGCCTGGAACCTTaGCTGACCCAAACAAGCAGA	+
Preference number: 3 (lower is better) Translates to: GSFSTSHACVIWGHVTCGSSLEP*LTQTSR Trigger: TCTGCTTGTTTGGGTCAGCAAAGGTTCCAGGCTGGA...GCCACAGGTCACATGACCCCAAATGACGCAGGCGTGAGATGTTGAGAAACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	AGCAAGGTCATCTCTACCATTTACTCACTGGGACCTTaGGTCAGTGTCCACTACCTCCTGGCCTCCTGTCTA	+
Preference number: 3 (lower is better) Translates to: SKVISTIYSLGP*VSVHYLLASCL Trigger: TAGACAGGAGGCCAGGAGGTAGTGGACACTGACCCAAGGTCCCAGTGAGTAAATGGTAGAGATGACCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	GCTGGAAGTTTCTCAACATCTCACGCCTGCGTCATTTaGGGTCATGTGACCTGTGGCTGTGGCACTCATCTT	+
Preference number: 3 (lower is better) Translates to: AGSFSTSHACVI*GHVTCGCGTHL Trigger: AAGATGAGTGCCACAGCCACAGGTCACATGACCCCAAATGACGCAGGCGTGAGATGTTGAGAAACTTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	GGGAGACAGCTAGCCCAGTTCATCCTCCATAAACTCTaGGGACTCCTGCTCATAACCTTCAGGGATCAAAGG	+
Preference number: 3 (lower is better) Translates to: GRQLAQFILHKL*GLLLITFRDQR Trigger: CCTTTGATCCCTGAAGGTTATGAGCAGGAGTCCCCAGAGTTTATGGAGGATGAACTGGGCTAGCTGTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	GGAAGGCTTGGGGCTGTGAGTAGCAAAGACTTTTTGTaGCTTAGGGTGGCACTGCAACATTCCCATAGCCAG	+
Preference number: 3 (lower is better) Translates to: GRLGAVSSKDFL*LRVALQHSHSQ Trigger: CTGGCTATGGGAATGTTGCAGTGCCACCCTAAGTCACAAAAAGTCTTTGCTACTCACAGCCCCAAGCCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	TTACTCAAATCCTGCTCGGACCACTCACCCACCATCTaGTATCACTACCATGATGGTGGCATGCATGGGACA	+
Preference number: 3 (lower is better) Translates to: LLKSCSDHSPTI*YHYHDGGMHGT Trigger: TGTCCCATGCATGCCACCATCATGGTAGTGATATCAGATGGTGGGTGAGTGGTCCGAGCAGGATTTGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	GGGCTCCCAATCTCTCACTCTGTGCATGACCGTGGATaGAATAGGATTCTCTCAAAGGATCTCTGCAGCTCT	+
Preference number: 3 (lower is better) Translates to: GLPISHSVHDRG*NRILSKDLCSS Trigger: AGAGCTGCAGAGATCCTTTGAGAGAATCCTATTTCATCCACGGTCATGCACAGAGTGAGAGATTGGGAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR GCA 72 bp	GAAGGCAGAAGATGGGGCTCCCAATCTCTCACTCTGTaGATGACCGTGGATGAAATAGGATTCTCTCAAAGG	+
Preference number: 3 (lower is better) Translates to: EGRRWGSQSLTL*MTVDEIGFSQR Trigger: CCTTTGAGAGAATCCTATTTCATCCACGGTCATGCACAGAGTGAGAGATTGGGAGCCCCATCTTCTGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	ATAAATGTCTCCAGCTTGAGCACTAGGAAGAGTCTATaGGAGATGCCCAAAGCTGGGCAGAGTTTAACCAGC	+
Preference number: 3 (lower is better) Translates to: INVSSLSTRKSL*EMPKAGQSLTS Trigger: GCTGGTTAAACTCTGCCCAGCTTTGGGCATCTCTCATAGACTCTTCCTAGTGCTCAAGCTGGAGACATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	ATTCTCTCAAAGGATCTCTGCAGCTCTAAACTCGCATaGAACCCATGTTCCCCCAGACCTTCTTTTGTGCTT	+
Preference number: 3 (lower is better) Translates to: ILSKDLCSSKLA*NPCSPRPSFVL Trigger: AAGCACAAAAGAAGGTCTGGGGGAACATGGGTTCCATGCGAGTTTAGAGCTGCAGAGATCCTTTGAGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CCA 72 bp	AAATCAAGAATCATTACGGACAGATGGAGTAGAGACTaGTGTCAGTCCCCTGGAAATAAGCCCCTTGATTGC	+
Preference number: 3 (lower is better) Translates to: KSRIITDRWSRD*CQSPGNKPLDC Trigger: GCAATCAAGGGGCTTATTTCCAGGGGACTGACACCAGTCTCTACTCCATCTGTCCGTAATGATTCTTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	TATCTGGCCCATCTTAATGTGGCCTCATCAACAGCCTaGTTCAATGACCTTGAACAAAGTGTCTTGACCCTT	+
Preference number: 3 (lower is better) Translates to: YLAHLNVASSTA*FNDLEQSVLTL Trigger: AAGGGTCAAGACACTTTGTTCAAGGTCATTGAATCAGGCTGTTGATGAGGCCACATTAAGATGGGCCAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR TCA 72 bp	TTGCTTACATGGGAAAAGCCTGGGACCCCAAGTCTTTaGAAATCAAGAATCATTACGGACAGATGGAGTAGA	+
Preference number: 3 (lower is better) Translates to: LLTWEKPGTPSL*KSRIITDRWSR Trigger: TCTACTCCATCTGTCCGTAATGATTCTTGATTTTCAAAGACTTGGGGTCCCAGGCTTTTCCCATGTAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAAGGCGCCCCCGGCTTTaGCCGCTCCGTACGCACCCC	+
Preference number: 4 (lower is better) Translates to: YIPGGRGAAQTRWPVDCARRPRL*PLRTHP Trigger: GGGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCT...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCAGGCGCCCCCGGCTTTaGCCGCTCCGTACGCACCCC	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGRRPRL*PLRTHP Trigger: GGGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCT...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	TTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTGCTTGGATGGCAGCCCGGGCTaGGTCCGTCCCTTCGTTCAG	+
Preference number: 4 (lower is better) Translates to: LEAEHVLGRVTWEGAGCLDGSPG*VRPFVQ Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCTGCCATC...CAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	TTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTGCTTGGGTAGGTGCCACCCATaGCAGCAGGGTCCGACCCAG	+
Preference number: 4 (lower is better) Translates to: LEAEHVLGRVTWEGAGCLGRCHP*QQGPTQ Trigger: CTGGGTCGGACCCTGCTGGCATGGGTGGCACCTACC...CAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR TCA 90 bp	TACATCCCAGGTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCACCTCCTCTGGGTTGTTaGGGTAGCCCTCGTTCACGA	+
Preference number: 4 (lower is better) Translates to: YIPGGRGAAQTRWPVDCAPPLGC*GSPRSR Trigger: TCGTGAACGAGGGCTACCTCAACAACCCAGAGGAGG...TGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCACCTGGGATGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGATGGCAGCCCGGGCTaGGTCCGTCCCTTCGTTCAG	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGDGSPG*VRPFVQ Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCTGCCATC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCAGAAGGAGAAGGCGATaGCAGCCCGGGCTGCGTCCG	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGRRRRR*QPGLRP Trigger: CGGACGCAGCCCGGGCTGCCATCGCCTTCTCCTTCT...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	CCCAGCTGCACTGGGCTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAAGGCTAGCACAGCCTaGCCCGCCTGCCCCATGTGT	+
Preference number: 4 (lower is better) Translates to: PSCTGLQWSHLEAEHVLGKASTA*PACPMC Trigger: ACACATGGGGCAGGCGGGCCAGGCTGTGCTAGCCTT...GCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGCGTACGGCCAGGGCTaGTGTCAGGCTCCACGTGAA	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGAYGQG*CQAPRE Trigger: TTCACGTGGAGCCTGACAGCAGCCCTGGCCGTACGC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	GTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGGACATGTCAATCAAAGGCGTTGGCTaGATGCTGGTAGGTGCCACC	+
Preference number: 4 (lower is better) Translates to: VDGVPPRQDGLWTAQDMSIKGVG*MLVGAT Trigger: GGTGGCACCTACCAGCATCCAGCCAACGCCTTTGAT...TGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 72 bp	TCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTaGAGCCACCTGGTCGGGGGCATAGGGCTGTACACA	+
Preference number: 4 (lower is better) Translates to: SGHCPPSPSRPY*SHLVGGIGLYT Trigger: TGTGTACAGCCCTATGCCCCCGACCAGGTGGCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCACACGACGCGCAGGATaGTGTGTGGCTGCCTCACCA	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGTRRAG*CVAASP Trigger: TGGTGAGGCAGCCACACACCATCCTGCGCGTCGTGT...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	GGCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATAGAAGGAGAAGGCGATaGCAGCCCGGGCTGCGTCCG	+
Preference number: 4 (lower is better) Translates to: GGTTCWVGGANTFRKQGHRRRRR*QPGLRP Trigger: CGGACGCAGCCCGGGCTGCCATCGCCTTCTCCTTCT...ATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	TTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTGCTTGGAGTCGGCGCCAATCTaGTACCTCTGGAAGGCTAGC	+
Preference number: 4 (lower is better) Translates to: LEAEHVLGRVTWEGAGCLESAPI*YLWKAS Trigger: GCTAGCCTTCCAGAGGTACCAGATTGGCGCCGACTC...CAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR CAA 72 bp	GTGGAGAGGGAAAGGAAATCCAGGGTGCTGCTGGCCTaGGGTCCTCCACGGGCTATGTTATGTCTGTGGGGG	+
Preference number: 4 (lower is better) Translates to: VERERKSRVLLA*GPPRAMLCLWG Trigger: CCCCCACAGACATAACATAGCCCGTGGAGGACCCAAGGCCAGCAGCACCCTGGATTTCCTTTCCCTCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR TCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCCCTCCTCTGGGTTGTTaGGGTAGCCCTCGTTCACGA	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGPPLGC*GSPRSR Trigger: TCGTGAACGAGGGCTACCTCAACAACCCAGAGGAGG...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCCAGTCACACCGTAGCTaGAGGCATTGGGGTTGCGGT	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGQSHRS*RHWGCG Trigger: ACCGCAACCCCAATGCCTGCAGCTACGGTGTGACTG...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	CTCTCCTCTGGTCACTGTCCACCATCCCCAAGCCGTCCCTACTTGAGCCACCTGTTGGGCTTGGAGACTTaGCACTGGTTGGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: LSSGHCPPSPSRPYLSHLLGLET*HWLARK Trigger: CTTCCTGGCCAACCAGTGGCAAGTCTCCAAGCCCAA...CAGGTGGCTCAAGTAGGGACGGCTTGGGGATGGTGGACAGTGACCAGAGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	TGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAAGGGTGCATAAGGCATaGTGGAGTCCTGGCTGGGGT	+
Preference number: 4 (lower is better) Translates to: WSHLEAEHVLGRVTWEGARVHKA*WSPGWG Trigger: ACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCT...TGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR GCA 90 bp	TGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGCTCCACGTAGGGTaGATAAGGCATGCTGGAGTC	+
Preference number: 4 (lower is better) Translates to: WSHLEAEHVLGRVTWEGAGLHVG*IRHAGV Trigger: GACTCCAGCATGCCTTATGCACCCTACGTGGAGCCC...TGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR GCA 90 bp	CTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGCTGGATGCTGGTAGGTaGCACCCATGCCAGCAGGGT	+
Preference number: 4 (lower is better) Translates to: LQWSHLEAEHVLGRVTWELDAGR*HPCQQG Trigger: ACCCTGCTGGCATGGGTGGCACCTACCAGCATCCAG...CTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR CCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCCTCCTCCTCCTCCTCTaGGTTGTTGAGGTAGCCCTC	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGLLLLL*VVEVAL Trigger: GAGGGCTACCTCAACAACCCAGAGGAGGAGGAGGAG...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCTTGGGCTTGGAGACTTaGCACTGGTTGGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGLGLET*HWLARK Trigger: CTTCCTGGCCAACCAGTGGCAAGTCTCCAAGCCCAA...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	TTAGGCCCCGCCCACTTTCCCTTCTGTCTTTGTGGCAACCGGCAAGCCGCTATTAGGGTGCATAAGGCATaGTGGAGTCCTGGCTGGGGT	+
Preference number: 4 (lower is better) Translates to: LGPAHFPFCLCGNRQAAIRVHKA*WSPGWG Trigger: ACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCT...AATAGCGGCTTGCCGGTTGCCACAAAGACAGAAGGGAAAGTGGGCGGGGCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	GTCATTTGGGGTCATGTGACCTGTGGCTGTGGCACTCATCTTGACCCTGTAGTTGGTAGGTGCCACCCATaGCAGCAGGGTCCGACCCAG	+
Preference number: 4 (lower is better) Translates to: VIWGHVTCGCGTHLDPVVGRCHP*QQGPTQ Trigger: CTGGGTCGGACCCTGCTGGCATGGGTGGCACCTACC...AACTACAGGGTCAAGATGAGTGCCACAGCCACAGGTCACATGACCCCAAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	TGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCACACAGACACACAGCCTaGTCCCAAACTGTGTCCTCG	+
Preference number: 4 (lower is better) Translates to: WSHLEAEHVLGRVTWEGAHRHTA*SQTVSS Trigger: CGAGGACACAGTTTGGGAGCAGGCTGTGTGTCTGTG...TGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS-3UTR CCA 90 bp	CAGTTCCATAGGGCATGGCTGTGGGGGACCCTCTCCAAAGAGAATGTGGGAGGACTCCTCCTCCTCCTCTaGGTTGTTGAGGTAGCCCTC	+
Preference number: 4 (lower is better) Translates to: QFHRAWLWGTLSKENVGGLLLLL*VVEVAL Trigger: GAGGGCTACCTCAACAACCCAGAGGAGGAGGAGGAG...TCCTCCCACATTCTCTTTGGAGAGGGTCCCCCACAGCCATGCCCTATGGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	TGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGTTGTCCTTGGGCTTaGAGACTTGCCACTGGTTGG	+
Preference number: 4 (lower is better) Translates to: WSHLEAEHVLGRVTWEGAGCPWA*RLATGW Trigger: CCAACCAGTGGCAAGTCTCCAAGCCCAAGGACAACC...TGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGGTTGTCCTTGGGCTTaGAGACTTGCCACTGGTTGG	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGGCPWA*RLATGW Trigger: CCAACCAGTGGCAAGTCTCCAAGCCCAAGGACAACC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	TGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCACCAATCTGGTACCTCTaGAAGGCTAGCACAGCCTGG	+
Preference number: 4 (lower is better) Translates to: WSHLEAEHVLGRVTWEGAPIWYL*KASTAW Trigger: CCAGGCTGTGCTAGCCTTCCAGAGGTACCAGATTGG...TGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGGTTGCGGTTGTAGATaGAGAACTCCTCCTCCTCCT	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGGCGCR*RTPPPP Trigger: AGGAGGAGGAGGAGTTCTGCATCTACAACCGCAACC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	GGCACGGACCCGCTTCCCAGTAACCAGCTACTGTGTACTGGGCACACACAGGAGTGCAGGCATTGGGGTTaGGGTTGTAGATGCAGAACT	+
Preference number: 4 (lower is better) Translates to: GTDPLPSNQLLCTGHTQECRHWG*GCRCRT Trigger: AGTTCTGCATCTACAACCGCAACCCCAATGCCTGCA...CTCCTGTGTGTGCCCAGTACACAGTAGCTGGTTACTGGGAAGCGGGTCCGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	CCCAGCTGCACTGGGCTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCTTGACACTGCTGATCTaGGGGAAGTACACATCGAGC	+
Preference number: 4 (lower is better) Translates to: PSCTGLQWSHLEAEHVLGLTLLI*GKYTSS Trigger: GCTCGATGTGTACTTCCCGCAGATCAGCAGTGTCAA...GCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	GCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCGGGCTCCACGTAGGGTaGATAAGGCATGCTGGAGTC	+
Preference number: 4 (lower is better) Translates to: AGPLAGWVEPIHLGSKVIGLHVG*IRHAGV Trigger: GACTCCAGCATGCCTTATGCACCCTACGTGGAGCCC...GATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	ACACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGCTGGATGCTGGTAGGTaGCACCCATGCCAGCAGGGT	+
Preference number: 4 (lower is better) Translates to: THLLTFIDTPHPSCTGLQLDAGR*HPCQQG Trigger: ACCCTGCTGGCATGGGTGGCACCTACCAGCATCCAG...CTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR CCA 90 bp	CACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTACACGACGCGCAGGATaGTGTGTGGCTGCCTCACCA	+
Preference number: 4 (lower is better) Translates to: HTCSHLLTLPTPAALGFSTRRAG*CVAASP Trigger: TGGTGAGGCAGCCACACACCATCCTGCGCGTCGTGT...ACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCTCAGAGGGTTGTCCTTaGGCTTGGAGACTTGCCACT	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGSEGCP*AWRLAT Trigger: AGTGGCAAGTCTCCAAGCCCAAGGACAACCCTCTGA...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	CCCACCACTCCCCACCCCTGCTGGACACACACTTGCTCACATTTATTGACACTCGAGTCGGCGCCAATCTaGTACCTCTGGAAGGCTAGC	+
Preference number: 4 (lower is better) Translates to: PTTPHPCWTHTCSHLLTLESAPI*YLWKAS Trigger: GCTAGCCTTCCAGAGGTACCAGATTGGCGCCGACTC...GAGTGTCAATAAATGTGAGCAAGTGTGTGTCCAGCAGGGGTGGGGAGTGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	AGCTGCACTGGGCTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAATCAAAGGCGTTGGCTaGATGCTGGTAGGTGCCACC	+
Preference number: 4 (lower is better) Translates to: SCTGLQWSHLEAEHVLGRIKGVG*MLVGAT Trigger: GGTGGCACCTACCAGCATCCAGCCAACGCCTTTGAT...TCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR CCA 90 bp	TTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTGCTTGTGTGGAGGGTTAATATaGCCCACAGACACACAGCCT	+
Preference number: 4 (lower is better) Translates to: LEAEHVLGRVTWEGAGCLCGGLI*PTDTQP Trigger: AGGCTGTGTGTCTGTGGGCCATATTAACCCTCCACA...CAAGCACCCTGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
3UTR CAA 72 bp	TGTCCTCTTAGGCCCCGCCCACTTTCCCTTCTGTCTTaGTGGCAACCGGCAAGCCGCTATTCACTTTCCCGT	+
Preference number: 4 (lower is better) Translates to: CPLRPRPLSLLS*WQPASRYSLSR Trigger: ACGGGAAAGTGAATAGCGGCTTGCCGGTTGCCACAAAGACAGAAGGGAAAGTGGGCGGGGCCTAAGAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR TCA 90 bp	TATCACTACCATGATGGTGGCATGCATGGGACAAGGGGAGATGCTCAAGACCCGCCTGGCCCGCCCACGTaGAAATGGAGAAGAAGGAGA	+
Preference number: 4 (lower is better) Translates to: YHYHDGGMHGTRGDAQDPPGPPT*KWRRRR Trigger: TCTCCTTCTTCTCCATTTTCACGTGGGCGGGCCAGG...CGGGTCTTGAGCATCTCCCCTTGTCCCATGCATGCCACCATCATGGTAGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR TCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCCTGTCAGGCTCCACGTaGAAATGGAGAAGAAGGAGA	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGLSGST*KWRRRR Trigger: TCTCCTTCTTCTCCATTTTCACGTGGAGCCTGACAG...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR GCA 90 bp	CTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGTTGCGGTTGTAGATaGAGAACTCCTCCTCCTCCT	+
Preference number: 4 (lower is better) Translates to: LQWSHLEAEHVLGRVTWEGCGCR*RTPPPP Trigger: AGGAGGAGGAGGAGTTCTGCATCTACAACCGCAACC...CTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	CACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTCAGTCACACCGTAGCTaGAGGCATTGGGGTTGCGGT	+
Preference number: 4 (lower is better) Translates to: HTCSHLLTLPTPAALGFSQSHRS*RHWGCG Trigger: ACCGCAACCCCAATGCCTGCAGCTACGGTGTGACTG...ACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR GCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCTTGACACTGCTGATCTaGGGGAAGTACACATCGAGC	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGLTLLI*GKYTSS Trigger: GCTCGATGTGTACTTCCCGCAGATCAGCAGTGTCAA...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CCA 90 bp	GGCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATCGTAGCTGCAGGCATTaGGGTTGCGGTTGTAGATGC	+
Preference number: 4 (lower is better) Translates to: GGTTCWVGGANTFRKQGHRSCRH*GCGCRC Trigger: GCATCTACAACCGCAACCCCAATGCCTGCAGCTACG...ATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 72 bp	AGCCCACTAGGAGAAGACCAAGACGGAGGAAGGGACTaGCATGAGGAAAGAAAGCAGCTGAGGCAGGGAAGG	+
Preference number: 4 (lower is better) Translates to: SPLGEDQDGGRD*HEERKQLRQGR Trigger: CCTTCCCTGCCTCAGCTGCTTTCTTTCCTCATGCAAGTCCCTTCCTCCGTCTTGGTCTTCTCCTAGTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 72 bp	GTTGAAAGCTCTCCCCACTGCTCCAGCCTGGAACCTTaGCTGACCCAAACAAGCAGAGAGAGGACAGTGTCC	+
Preference number: 4 (lower is better) Translates to: VESSPHCSSLEP*LTQTSRERTVS Trigger: GGACACTGTCCTCTCTCTGCTTGTTTGGGTCAGCAAAGGTTCCAGGCTGGAGCAGTGGGGAGAGCTTTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	ACACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGCCAATCTGGTACCTCTaGAAGGCTAGCACAGCCTGG	+
Preference number: 4 (lower is better) Translates to: THLLTFIDTPHPSCTGLQPIWYL*KASTAW Trigger: CCAGGCTGTGCTAGCCTTCCAGAGGTACCAGATTGG...CTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
3UTR CAA 72 bp	GGCTGGAAGTTTCTCAACATCTCACGCCTGCGTCATTaGGGGTCATGTGACCTGTGGCTGTGGCACTCATCT	+
Preference number: 4 (lower is better) Translates to: GWKFLNISRLRH*GSCDLWLWHSS Trigger: AGATGAGTGCCACAGCCACAGGTCACATGACCCCAAATGACGCAGGCGTGAGATGTTGAGAAACTTCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 72 bp	CCTGGTTCTGGAAACTTCCCGAGGACTCGGAAGGGTTaGTTTCCCTTCCTGGTTTCCCCTTCTGCTCAAGAG	+
Preference number: 4 (lower is better) Translates to: PGSGNFPRTRKG*FPFLVSPSAQE Trigger: CTCTTGAGCAGAAGGGGAAACCAGGAAGGGAAACAAACCCTTCCGAGTCCTCGGGAAGTTTCCAGAACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	CACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTTCAGAGGGTTGTCCTTaGGCTTGGAGACTTGCCACT	+
Preference number: 4 (lower is better) Translates to: HTCSHLLTLPTPAALGFSSEGCP*AWRLAT Trigger: AGTGGCAAGTCTCCAAGCCCAAGGACAACCCTCTGA...ACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
3UTR CAA 72 bp	AAGCAAGGTCATCTCTACCATTTACTCACTGGGACCTaGGGTCAGTGTCCACTACCTCCTGGCCTCCTGTCT	+
Preference number: 4 (lower is better) Translates to: KQGHLYHLLTGT*GQCPLPPGLLS Trigger: AGACAGGAGGCCAGGAGGTAGTGGACACTGACCCAAGGTCCCAGTGAGTAAATGGTAGAGATGACCTTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CCA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGTGTTGTATTCCTCCTaGAAGGTAAGCTCCTTGAAT	+
Preference number: 4 (lower is better) Translates to: LPQPASSCPSDHTSPTLGVLYSS*KVSSLN Trigger: ATTCAAGGAGCTTACCTTCCAGGAGGAATACAACAC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
3UTR CAA 72 bp	CGCACACACGCACACGCACACACACTCACAGATATATaGTGGAGCCTTATATTATACATCTTATATATAGAA	+
Preference number: 4 (lower is better) Translates to: RTHAHAHTLTDI*WSLILYILYIE Trigger: TTCTATATATAAGATGTATAATATAAGGCTCCACAATATATCTGTGAGTGTGTGTGCGTGTGCGTGTGTGCG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS CCA 90 bp	GGTCCGACCCAGCGCTGGGCTCCACGTAGGGTGCATAAGGCATGCTaGAGTCCTGGCTGGGGTCCATGTAGTCCTGGGAGAAGAGGGCCG	+
Preference number: 5 (lower is better) Translates to: GPTQRWAPRRVHKAC*SPGWGPCSPGRRGP Trigger: CGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCGCTGGGTCGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS CCA 90 bp	GATGCTGGTAGGTGCCACCCATGCCAGCAGGGTCCGACCCAGCGCTaGGCTCCACGTAGGGTGCATAAGGCATGCTGGAGTCCTGGCTGG	+
Preference number: 5 (lower is better) Translates to: DAGRCHPCQQGPTQR*APRRVHKACWSPGW Trigger: CCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCGCTGGGTCGGACCCTGCTGGCATGGGTGGCACCTACCAGCATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS-3UTR CAA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCAAGGCGCCCCCGGCTTaGCCCGCTCCGTACGCACCC	+
Preference number: 5 (lower is better) Translates to: LPQPASSCPSDHTSPTLGKAPPA*PAPYAP Trigger: GGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCTT...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS GCA 90 bp	CAGGGTCCGACCCAGCGCTGGGCTCCACGTAGGGTGCATAAGGCATaGTGGAGTCCTGGCTGGGGTCCATGTAGTCCTGGGAGAAGAGGG	+
Preference number: 5 (lower is better) Translates to: QGPTQRWAPRRVHKA*WSPGWGPCSPGRRG Trigger: CCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCGCTGGGTCGGACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS GCA 90 bp	ACCCATGCCAGCAGGGTCCGACCCAGCGCTGGGCTCCACGTAGGGTaGATAAGGCATGCTGGAGTCCTGGCTGGGGTCCATGTAGTCCTG	+
Preference number: 5 (lower is better) Translates to: THASRVRPSAGLHVG*IRHAGVLAGVHVVL Trigger: CAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCGCTGGGTCGGACCCTGCTGGCATGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS CCA 90 bp	GACCACGATGGAGAAGACCCAAGACACGACGCGCAGGATGGTGTGTaGCTGCCTCACCAGGGTGTAGGGGTCGAAGGCGCCCCCGGCTTT	+
Preference number: 5 (lower is better) Translates to: DHDGEDPRHDAQDGV*LPHQGVGVEGAPGF Trigger: AAAGCCGGGGGCGCCTTCGACCCCTACACCCTGGTGAGGCAGCCACACACCATCCTGCGCGTCGTGTCTTGGGTCTTCTCCATCGTGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13
CDS CCA 90 bp	AGCCGAAGACCACGATGGAGAAGACCCAAGACACGACGCGCAGGATaGTGTGTGGCTGCCTCACCAGGGTGTAGGGGTCGAAGGCGCCCC	+
Preference number: 5 (lower is better) Translates to: SRRPRWRRPKTRRAG*CVAASPGCRGRRRP Trigger: GGGGCGCCTTCGACCCCTACACCCTGGTGAGGCAGCCACACACCATCCTGCGCGTCGTGTCTTGGGTCTTCTCCATCGTGGTCTTCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13
CDS CCA 90 bp	CGCTGGGCTCCACGTAGGGTGCATAAGGCATGCTGGAGTCCTGGCTaGGGTCCATGTAGTCCTGGGAGAAGAGGGCCGAGTCGGCGCCAA	+
Preference number: 5 (lower is better) Translates to: RWAPRRVHKACWSPG*GPCSPGRRGPSRRQ Trigger: TTGGCGCCGACTCGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS CCA 90 bp	GCCGAGTCGGCGCCAATCTGGTACCTCTGGAAGGCTAGCACAGCCTaGCCCGCCTGCCCCATGTGTCCCAAGGCAAGACCACTCCACTGT	+
Preference number: 5 (lower is better) Translates to: AESAPIWYLWKASTA*PACPMCPKARPLHC Trigger: ACAGTGGAGTGGTCTTGCCTTGGGACACATGGGGCAGGCGGGCCAGGCTGTGCTAGCCTTCCAGAGGTACCAGATTGGCGCCGACTCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS-3UTR CAA 90 bp	GGCGGGACCACTTGCTGGGTGGGTGGAGCCAATACATTTAGGAAGCAAGGTCATAAGGCGCCCCCGGCTTaGCCCGCTCCGTACGCACCC	+
Preference number: 5 (lower is better) Translates to: GGTTCWVGGANTFRKQGHKAPPA*PAPYAP Trigger: GGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCTT...ATGACCTTGCTTCCTAAATGTATTGGCTCCACCCACCCAGCAAGTGGTCCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CAA 90 bp	CCCAGCTGCACTGGGCTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCGAGAGCACGGCCTTCTaGCGGTCCTTGACACTGCTG	+
Preference number: 5 (lower is better) Translates to: PSCTGLQWSHLEAEHVLGESTAF*RSLTLL Trigger: CAGCAGTGTCAAGGACCGCAAGAAGGCCGTGCTCTC...GCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CAA 90 bp	GTGGACGGGGTGCCGCCCAGACAAGATGGCCTGTGGACTGCGCAGGACATGTCATTCAGAGGGTTGTCCTaGGGCTTGGAGACTTGCCAC	+
Preference number: 5 (lower is better) Translates to: VDGVPPRQDGLWTAQDMSFRGLS*GLETCH Trigger: GTGGCAAGTCTCCAAGCCCAAGGACAACCCTCTGAA...TGACATGTCCTGCGCAGTCCACAGGCCATCTTGTCTGGGCGGCACCCCGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CAA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGCCTTCTTGCGGTCCTaGACACTGCTGATCTGCGGG	+
Preference number: 5 (lower is better) Translates to: LPQPASSCPSDHTSPTLGAFLRS*TLLICG Trigger: CCCGCAGATCAGCAGTGTCAAGGACCGCAAGAAGGC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CAA 90 bp	TGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGAGTCACCTGGGAGGGAGCAGGGTTGTCCTTGGGCTaGGAGACTTGCCACTGGTTG	+
Preference number: 5 (lower is better) Translates to: WSHLEAEHVLGRVTWEGAGLSLG*ETCHWL Trigger: CAACCAGTGGCAAGTCTCCAAGCCCAAGGACAACCC...TGCTCCCTCCCAGGTGACTCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CAA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGGGTTGTCCTTGGGCTaGGAGACTTGCCACTGGTTG	+
Preference number: 5 (lower is better) Translates to: LPQPASSCPSDHTSPTLGGLSLG*ETCHWL Trigger: CAACCAGTGGCAAGTCTCCAAGCCCAAGGACAACCC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS CCA 90 bp	CCCATGTGTCCCAAGGCAAGACCACTCCACTGTGGAGGGTTAATATaGCCCACAGACACACAGCCTGCTCCCAAACTGTGTCCTCGGGGA	+
Preference number: 5 (lower is better) Translates to: PMCPKARPLHCGGLI*PTDTQPAPKLCPRG Trigger: TCCCCGAGGACACAGTTTGGGAGCAGGCTGTGTGTCTGTGGGCCATATTAACCCTCCACAGTGGAGTGGTCTTGCCTTGGGACACATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS-3UTR CAA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCTTCAGAGGGTTGTCCTaGGGCTTGGAGACTTGCCAC	+
Preference number: 5 (lower is better) Translates to: LPQPASSCPSDHTSPTLGFRGLS*GLETCH Trigger: GTGGCAAGTCTCCAAGCCCAAGGACAACCCTCTGAA...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CAA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCCCTTCGTTCAGAGGGTaGTCCTTGGGCTTGGAGACT	+
Preference number: 5 (lower is better) Translates to: LPQPASSCPSDHTSPTLGPSFRG*SLGLET Trigger: AGTCTCCAAGCCCAAGGACAACCCTCTGAACGAAGG...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CAA 90 bp	TATCACTACCATGATGGTGGCATGCATGGGACAAGGGGAGATGCTCAAGACCCGGCCTTCTTGCGGTCCTaGACACTGCTGATCTGCGGG	+
Preference number: 5 (lower is better) Translates to: YHYHDGGMHGTRGDAQDPAFLRS*TLLICG Trigger: CCCGCAGATCAGCAGTGTCAAGGACCGCAAGAAGGC...CGGGTCTTGAGCATCTCCCCTTGTCCCATGCATGCCACCATCATGGTAGTGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CAA 90 bp	AGCTGCACTGGGCTTCAGTGGAGTCACTTGGAGGCTGAGCATGTGCTAGGCAGACCTTCGTTCAGAGGGTaGTCCTTGGGCTTGGAGACT	+
Preference number: 5 (lower is better) Translates to: SCTGLQWSHLEAEHVLGRPSFRG*SLGLET Trigger: AGTCTCCAAGCCCAAGGACAACCCTCTGAACGAAGG...TCTGCCTAGCACATGCTCAGCCTCCAAGTGACTCCACTGAAGCCCAGTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS-3UTR CAA 90 bp	CTTCCCCAGCCAGCCTCCTCCTGTCCTAGTGATCACACATCTCCAACACTGGGCGCAGGGAACAGTGTGTaGTATTCCTCCTGGAAGGTA	+
Preference number: 5 (lower is better) Translates to: LPQPASSCPSDHTSPTLGAGNSV*YSSWKV Trigger: TACCTTCCAGGAGGAATACAACACACTGTTCCCTGC...GCCCAGTGTTGGAGATGTGTGATCACTAGGACAGGAGGAGGCTGGCTGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS-3UTR CAA 90 bp	CACACTTGCTCACATTTATTGACACTCCCCACCCCAGCTGCACTGGGCTTCAGTAAACGGGAGAAAAGGTaGCCTAGAACAGAGAACTCT	+
Preference number: 5 (lower is better) Translates to: HTCSHLLTLPTPAALGFSKREKR*PRTENS Trigger: AGAGTTCTCTGTTCTAGGCAACCTTTTCTCCCGTTT...ACTGAAGCCCAGTGCAGCTGGGGTGGGGAGTGTCAATAAATGTGAGCAAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS CCA 72 bp	GAGAAGAGGGCCGAGTCGGCGCCAATCTGGTACCTCTaGAAGGCTAGCACAGCCTGGCCCGCCTGCCCCATG	+
Preference number: 6 (lower is better) Translates to: EKRAESAPIWYL*KASTAWPACPM Trigger: CATGGGGCAGGCGGGCCAGGCTGTGCTAGCCTTCCAGAGGTACCAGATTGGCGCCGACTCGGCCCTCTTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS GCA 72 bp	AGCAGGGTCCGACCCAGCGCTGGGCTCCACGTAGGGTaGATAAGGCATGCTGGAGTCCTGGCTGGGGTCCAT	+
Preference number: 6 (lower is better) Translates to: SRVRPSAGLHVG*IRHAGVLAGVH Trigger: ATGGACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCGCTGGGTCGGACCCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS CCA 72 bp	GGAGAAGACCCAAGACACGACGCGCAGGATGGTGTGTaGCTGCCTCACCAGGGTGTAGGGGTCGAAGGCGCC	+
Preference number: 6 (lower is better) Translates to: GEDPRHDAQDGV*LPHQGVGVEGA Trigger: GGCGCCTTCGACCCCTACACCCTGGTGAGGCAGCCACACACCATCCTGCGCGTCGTGTCTTGGGTCTTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13
CDS CCA 72 bp	AGGTGCCACCCATGCCAGCAGGGTCCGACCCAGCGCTaGGCTCCACGTAGGGTGCATAAGGCATGCTGGAGT	+
Preference number: 6 (lower is better) Translates to: RCHPCQQGPTQR*APRRVHKACWS Trigger: ACTCCAGCATGCCTTATGCACCCTACGTGGAGCCCAGCGCTGGGTCGGACCCTGCTGGCATGGGTGGCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS CCA 72 bp	GAGAAGAGGGCCGAGTCGGCGCCAATCTGGTACCTCTaGAAGGCTAGCACAGCCTGGCCCGCCCACGTGAAA	+
Preference number: 6 (lower is better) Translates to: EKRAESAPIWYL*KASTAWPAHVK Trigger: TTTCACGTGGGCGGGCCAGGCTGTGCTAGCCTTCCAGAGGTACCAGATTGGCGCCGACTCGGCCCTCTTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS CCA 72 bp	CCACGATGGAGAAGACCCAAGACACGACGCGCAGGATaGTGTGTGGCTGCCTCACCAGGGTGTAGGGGTCGA	+
Preference number: 6 (lower is better) Translates to: PRWRRPKTRRAG*CVAASPGCRGR Trigger: TCGACCCCTACACCCTGGTGAGGCAGCCACACACCATCCTGCGCGTCGTGTCTTGGGTCTTCTCCATCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13
CDS CCA 72 bp	CCACGTAGGGTGCATAAGGCATGCTGGAGTCCTGGCTaGGGTCCATGTAGTCCTGGGAGAAGAGGGCCGAGT	+
Preference number: 6 (lower is better) Translates to: PRRVHKACWSPG*GPCSPGRRGPS Trigger: ACTCGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTATGCACCCTACGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009727.12 ENSMUST00000135727.2
CDS CAA 90 bp	AAGGCCCAGAAGGCCGAGACACCGATGTCAGAGAGCACGGCCTTCTaGCGGTCCTTGACACTGCTGATCTGCGGGAAGTACACATCGAGC	+
Preference number: 6 (lower is better) Translates to: KAQKAETPMSESTAF*RSLTLLICGKYTSS Trigger: GCTCGATGTGTACTTCCCGCAGATCAGCAGTGTCAAGGACCGCAAGAAGGCCGTGCTCTCTGACATCGGTGTCTCGGCCTTCTGGGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13 ENSMUST00000143928.2
CDS GCA 72 bp	CACCCACAGTCACACCGTAGCTGCAGGCATTGGGGTTaGGGTTGTAGATGCAGAACTCCTCCTCCTCCTCTG	+
Preference number: 6 (lower is better) Translates to: HPQSHRSCRHWG*GCRCRTPPPPL Trigger: CAGAGGAGGAGGAGGAGTTCTGCATCTACAACCGCAACCCCAATGCCTGCAGCTACGGTGTGACTGTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13 ENSMUST00000143928.2
CDS CCA 72 bp	GCGCCAATCTGGTACCTCTGGAAGGCTAGCACAGCCTaGCCCGCCCACGTGAAAATGGAGAAGAAGGAGAAG	+
Preference number: 6 (lower is better) Translates to: APIWYLWKASTA*PAHVKMEKKEK Trigger: CTTCTCCTTCTTCTCCATTTTCACGTGGGCGGGCCAGGCTGTGCTAGCCTTCCAGAGGTACCAGATTGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009727.12
CDS CCA 72 bp	CTGCCCCATGTGTCCCAAGGCAAGACCACTCCACTGTaGAGGGTTAATATGGCCCACAGACACACAGCCTGC	+
Preference number: 6 (lower is better) Translates to: LPHVSQGKTTPL*RVNMAHRHTAC Trigger: GCAGGCTGTGTGTCTGTGGGCCATATTAACCCTCCACAGTGGAGTGGTCTTGCCTTGGGACACATGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135727.2
CDS CAA 72 bp	AAGGCCGAGACACCGATGTCAGAGAGCACGGCCTTCTaGCGGTCCTTGACACTGCTGATCTGCGGGAAGTAC	+
Preference number: 6 (lower is better) Translates to: KAETPMSESTAF*RSLTLLICGKY Trigger: GTACTTCCCGCAGATCAGCAGTGTCAAGGACCGCAAGAAGGCCGTGCTCTCTGACATCGGTGTCTCGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13 ENSMUST00000143928.2
CDS CCA 72 bp	CCAACACACCCACAGTCACACCGTAGCTGCAGGCATTaGGGTTGCGGTTGTAGATGCAGAACTCCTCCTCCT	+
Preference number: 6 (lower is better) Translates to: PTHPQSHRSCRH*GCGCRCRTPPP Trigger: AGGAGGAGGAGTTCTGCATCTACAACCGCAACCCCAATGCCTGCAGCTACGGTGTGACTGTGGGTGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13 ENSMUST00000143928.2
CDS CAA 72 bp	ACACCGATGTCAGAGAGCACGGCCTTCTTGCGGTCCTaGACACTGCTGATCTGCGGGAAGTACACATCGAGC	+
Preference number: 6 (lower is better) Translates to: TPMSESTAFLRS*TLLICGKYTSS Trigger: GCTCGATGTGTACTTCCCGCAGATCAGCAGTGTCAAGGACCGCAAGAAGGCCGTGCTCTCTGACATCGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009727.12 ENSMUST00000009728.13 ENSMUST00000143928.2
CDS CAA 90 bp	GAGGCAGGGAACAGTGTGTTGTATTCCTCCTGGAAGGTAAGCTCCTaGAATCTGCGTACGGCCAGGGCTGCTGTCAGGCTCCACGTGAAA	+
Preference number: 6 (lower is better) Translates to: EAGNSVLYSSWKVSS*NLRTARAAVRLHVK Trigger: TTTCACGTGGAGCCTGACAGCAGCCCTGGCCGTACGCAGATTCAAGGAGCTTACCTTCCAGGAGGAATACAACACACTGTTCCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS CCA 72 bp	TGTGCGGAGGCAGGGAACAGTGTGTTGTATTCCTCCTaGAAGGTAAGCTCCTTGAATCTGCGTACGGCCAGG	+
Preference number: 6 (lower is better) Translates to: CAEAGNSVLYSS*KVSSLNLRTAR Trigger: CCTGGCCGTACGCAGATTCAAGGAGCTTACCTTCCAGGAGGAATACAACACACTGTTCCCTGCCTCCGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS GCA 72 bp	GAAGGTAAGCTCCTTGAATCTGCGTACGGCCAGGGCTaGTGTCAGGCTCCACGTGAAAATGGAGAAGAAGGA	+
Preference number: 6 (lower is better) Translates to: EGKLLESAYGQG*CQAPRENGEEG Trigger: TCCTTCTTCTCCATTTTCACGTGGAGCCTGACAGCAGCCCTGGCCGTACGCAGATTCAAGGAGCTTACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009728.13
CDS CAA 72 bp	AACAGTGTGTTGTATTCCTCCTGGAAGGTAAGCTCCTaGAATCTGCGTACGGCCAGGGCTGCTGTCAGGCTC	+
Preference number: 6 (lower is better) Translates to: NSVLYSSWKVSS*NLRTARAAVRL Trigger: GAGCCTGACAGCAGCCCTGGCCGTACGCAGATTCAAGGAGCTTACCTTCCAGGAGGAATACAACACACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009728.13

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