RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNE2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063450

Ensembl transcript IDs: ENSMUST00000044217.16, ENSMUST00000085280.12, ENSMUST00000126903.2, ENSMUST00000131480.8, ENSMUST00000132161.2, ENSMUST00000139204.8, ENSMUST00000142864.8, ENSMUST00000143031.8, ENSMUST00000148324.2, ENSMUST00000148825.2, ENSMUST00000150317.8, ENSMUST00000154509.8

Found 2020 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCGGCTaGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTGTC +
Preference number: 1 (lower is better)
Translates to: GSAALITLERKERLG*ELPGLSRWGILLSV
Trigger: GACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR TCA 90 bp GGAGCAGCAGCAGCAGCAGAAGCAGCTGCAACGGTAGCGCTGCCCTaGTCACCCTTGAGAGGAAGGAGCGTCTCGGCTGGGAGCTGCCGG +
Preference number: 1 (lower is better)
Translates to: GAAAAAEAAATVALP*SPLRGRSVSAGSCR
Trigger: CCGGCAGCTCCCAGCCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCTGCTGCTGCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR GCA 90 bp AGCGTCTCGGCTGGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTaGTGTCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACT +
Preference number: 1 (lower is better)
Translates to: SVSAGSCRGCRGGAS*CLSPPPPLPLPLQT
Trigger: AGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR GCA 90 bp GCAGGTAGCAGGCAGGCCAGGAGCAGCAGCAGCAGCAGAAGCAGCTaGAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGT +
Preference number: 1 (lower is better)
Translates to: AGSRQARSSSSSRSS*NGSAALITLERKER
Trigger: ACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCTGCTGCTGCTGCTCCTGGCCTGCCTGCTACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CCA 90 bp CTCCGCAGGATGGCTGTGACCCGCTTCTGCAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCTGTGTCG +
Preference number: 1 (lower is better)
Translates to: LRRMAVTRFCRLSQR*LPSCTICFSLLAVS
Trigger: CGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCATCCTGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CCA 90 bp TGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTaGCCCGTTGGTGTACCGCAGCATGGGGTAGAAGGATCGGGCAAA +
Preference number: 1 (lower is better)
Translates to: CRPWHCSWWNLLGGR*PVGVPQHGVEGSGK
Trigger: TTTGCCCGATCCTTCTACCCCATGCTGCGGTACACCAACGGGCCACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CCA 90 bp AACAGGCTGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTaGGAGGTGGCCCGTTGGTGTACCGCAGCATGGGGTAGAAGGATC +
Preference number: 1 (lower is better)
Translates to: NRLSAMALQLVEPSR*EVARWCTAAWGRRI
Trigger: GATCCTTCTACCCCATGCTGCGGTACACCAACGGGCCACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR GCA 90 bp TTGGTGAAGTACCTGAGTCTCCGCAGGATGGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGGTTGCCCTCGTGCACCATCTGCTTC +
Preference number: 1 (lower is better)
Translates to: LVKYLSLRRMAVTRF*RLSQRWLPSCTICF
Trigger: GAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCATCCTGCGGAGACTCAGGTACTTCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CCA 90 bp CAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTaGTTAGAGAAGCATCCGGATCCAGGCTTCTCTGCAAGGACATCA +
Preference number: 1 (lower is better)
Translates to: QRLLGAVLLSPPHQS*LEKHPDPGFSARTS
Trigger: TGATGTCCTTGCAGAGAAGCCTGGATCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR TCA 90 bp TTGGAAGCCGTTCAGTTGGCGCATCTTGTCCTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGTCAGCTGCAGGTCCATTTCTGTGAG +
Preference number: 1 (lower is better)
Translates to: LEAVQLAHLVLSVTL*EVFYVGQLQVHFCE
Trigger: CTCACAGAAATGGACCTGCAGCTGACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR TCA 90 bp AGAGAAGCATCCGGATCCAGGCTTCTCTGCAAGGACATCAGATCTTaGGCCACTTGCTCTTGCAGTTGCTTGAGTTTCTTCTCGATCACG +
Preference number: 1 (lower is better)
Translates to: REASGSRLLCKDIRS*ATCSCSCLSFFSIT
Trigger: CGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGAGAAGCCTGGATCCGGATGCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR TCA 90 bp TCTGCAAGGACATCAGATCTTGAGCCACTTGCTCTTGCAGTTGCTTaGGTTTCTTCTCGATCACGTGGACCTTCTCTTCGGCCTCAATGT +
Preference number: 1 (lower is better)
Translates to: SARTSDLEPLALAVA*VSSRSRGPSLRPQC
Trigger: ACATTGAGGCCGAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 90 bp CGCAGGATGGCTGTGACCCGCTTCTGCAGATTGTCCCAGCGCTGGTaGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCTGTGTCGGTG +
Preference number: 2 (lower is better)
Translates to: RRMAVTRFCRLSQRW*PSCTICFSLLAVSV
Trigger: CACCGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCATCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR GCA 90 bp GTGACCCGCTTCTGCAGATTGTCCCAGCGCTGGTTGCCCTCGTGCACCATCTGCGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: VTRFCRLSQRWLPSCTICASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR TCA 90 bp AACAGGCTGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTGTGCCCTGATCACCCTTaGGAGGAAGGAGCGTCTCGG +
Preference number: 2 (lower is better)
Translates to: NRLSAMALQLVEPSRWEVCPDHP*EEGASR
Trigger: CCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCA...CACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 90 bp GGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTaGTCAAGGCAAAGTCACTCCGGGGTTAGTCTGATCCCACGAGCT +
Preference number: 2 (lower is better)
Translates to: GLPESTWTRGGSPWT*SRQSHSGVSLIPRA
Trigger: AGCTCGTGGGATCAGACTAACCCCGGAGTGACTTTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 90 bp AAGTACCTGAGTCTCCGCAGGATGGCTGTGACCCGCTTCTGCAGATaGTCCCAGCGCTGGTTGCCCTCGTGCACCATCTGCTTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: KYLSLRRMAVTRFCR*SQRWLPSCTICFSL
Trigger: CAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCATCCTGCGGAGACTCAGGTACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCGAGCTGAGCACTTGTaGTCAACAGGCTGTCGGCCA +
Preference number: 2 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRAEHL*STGCRP
Trigger: TGGCCGACAGCCTGTTGACCACAAGTGCTCAGCTCG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACACAGGCTGTCGGCCATaGCACTGCAGCTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: QQKDILSELSWAPRVHLDTGCRP*HCSWWN
Trigger: GTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACGAGCTGAGCACTTGTaGTCAACAGGCTGTCGGCCA +
Preference number: 2 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRAEHL*STGCRP
Trigger: TGGCCGACAGCCTGTTGACCACAAGTGCTCAGCTCG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp AGCAGAAGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCCTTCACCAGAAGGCTaGAGGAAATCTCCCGCAAGG +
Preference number: 2 (lower is better)
Translates to: SRSSCNGSAALITLERKEPSPEG*RKSPAR
Trigger: CCTTGCGGGAGATTTCCTCCAGCCTTCTGGTGAAGG...CTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCGAGCTGAGCACTTGTaGTCAACAGGCTGTCGGCCA +
Preference number: 2 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRAEHL*STGCRP
Trigger: TGGCCGACAGCCTGTTGACCACAAGTGCTCAGCTCG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 90 bp CTCGATCACGTGGACCTTCTCTTCGGCCTCAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCTGGAGGAAATCTCCCGCAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LDHVDLLFGLNVVFS*PLHQKAGGNLPQGA
Trigger: AGCTCCTTGCGGGAGATTTCCTCCAGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATTGAGGCCGAAGAGAAGGTCCACGTGATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR GCA 90 bp GGTGTTCAGTGTGATCTCCTGTTGGAAGCCGTTCAGTTGGCGCATCTTGTCCTCCCATCTGCTTCAGCTTaGTGGCTGTGTCGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: GVQCDLLLEAVQLAHLVLPSASA*WLCRCG
Trigger: ACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGG...GAGGACAAGATGCGCCAACTGAACGGCTTCCAACAGGAGATCACACTGAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CAA 90 bp CAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTaGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: QKDILSELSWAPRVH*DKRRESLDLVKAKS
Trigger: TGACTTTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 90 bp GCTGTGCTTGATTCTCTGTTCCAGCAGAAGGACATCTTGTCTGAGTaGTCCTGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: AVLDSLFQQKDILSE*SWAPRVHLDKRRES
Trigger: GGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTGGAACAGAGAATCAAGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 90 bp CCAGGTCCTGCTGTGCTTGATTCTCTGTTCCAGCAGAAGGACATCTaGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAAGAGG +
Preference number: 2 (lower is better)
Translates to: PGPAVLDSLFQQKDI*SELSWAPRVHLDKR
Trigger: CCTCTTGTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTGGAACAGAGAATCAAGCACAGCAGGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR TCA 90 bp GGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGAGAAGGACATCTTGTCTaGGTTGTCCTGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GSCSPESTSSKLVREASGEGHLV*VVLGSQ
Trigger: CTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTC...TCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 90 bp TGCTGTCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTTaGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAA +
Preference number: 2 (lower is better)
Translates to: CCLSPPPPLPLPLQT*QRLLGAVLLSPPHQ
Trigger: TTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACAGGCTGTCGGCCATaGCACTGCAGCTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTGCRP*HCSWWN
Trigger: GTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAACAGGCTGTCGGCCATaGCACTGCAGCTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: GPYELCYNNCFPQCVALPTGCRP*HCSWWN
Trigger: GTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 90 bp GTGTTCAGTGTGATCTCCTGTTGGAAGCCGTTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCTGAGAAGTGTTCTACGTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: VFSVISCWKPFSWRI*SSASLSEKCSTLVS
Trigger: GCTGACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCAACAGGAGATCACACTGAACAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACAGGCTGTCGGCCATaGCACTGCAGCTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTGCRP*HCSWWN
Trigger: GTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACGAGCTGAGCACTTGTaGTCAACAGGCTGTCGGCCA +
Preference number: 2 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRAEHL*STGCRP
Trigger: TGGCCGACAGCCTGTTGACCACAAGTGCTCAGCTCG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp TTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTATTGTCTGAGTTGTCCTaGGCTCCCAGAGTCCACTTG +
Preference number: 2 (lower is better)
Translates to: LQRLLGAVLLSPPHQSWLLSELS*APRVHL
Trigger: CAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAA...TAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CCA 90 bp GATGAGCTGGTCGATCTTGTTGGTGTTCAGTGTGATCTCCTGTTGGAAGCCGTTTCTGCTTCAGCTTGCTaGCTGTGTCGGTGCGGTTCT +
Preference number: 2 (lower is better)
Translates to: DELVDLVGVQCDLLLEAVSASAC*LCRCGS
Trigger: AGAACCGCACCGACACAGCCAGCAAGCTGAAGCAGA...AACGGCTTCCAACAGGAGATCACACTGAACACCAACAAGATCGACCAGCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CAA 90 bp GCTTCTCTGCAAGGACATCAGATCTTGAGCCACTTGCTCTTGCAGTaGCTTGAGTTTCTTCTCGATCACGTGGACCTTCTCTTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: ASLQGHQILSHLLLQ*LEFLLDHVDLLFGL
Trigger: GAGGCCGAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGAAGGACATCTTGTCTaGGTTGTCCTGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GPYELCYNNCFPQCVALPEGHLV*VVLGSQ
Trigger: CTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGCCAGGTCCTGCTGTaGTTGATTCTCTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCQVLL*LILCSS
Trigger: GCTGGAACAGAGAATCAAGCACAGCAGGACCTGGCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTACAGGCTGTCGGCCATaGCACTGCAGCTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: TPLFMGLMSCATITVFHSTGCRP*HCSWWN
Trigger: GTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTGTCTGAGTTGTCCTaGGCTCCCAGAGTCCACTTG +
Preference number: 2 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLSELS*APRVHL
Trigger: CAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp TGGTTGGTGAAGTACCTGAGTCTCCGCAGGATGGCTGTGACCCGCTTCTGCAGAGTTTCAGCTCCTCTTTaGCATTTGTATACAACACCT +
Preference number: 2 (lower is better)
Translates to: WLVKYLSLRRMAVTRFCRVSAPL*HLYTTP
Trigger: AGGTGTTGTATACAAATGCCAAAGAGGAGCTGAAAC...TCTGCAGAAGCGGGTCACAGCCATCCTGCGGAGACTCAGGTACTTCACCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CAA 90 bp ATCCAGGCTTCTCTGCAAGGACATCAGATCTTGAGCCACTTGCTCTaGCAGTTGCTTGAGTTTCTTCTCGATCACGTGGACCTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: IQASLQGHQILSHLL*QLLEFLLDHVDLLF
Trigger: GAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGAGAAGCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGCCAGGTCCTGCTGTaGTTGATTCTCTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCQVLL*LILCSS
Trigger: GCTGGAACAGAGAATCAAGCACAGCAGGACCTGGCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCCACTCCAAACTTTaGAAAGGCTGCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFHSKL*KGCWEL
Trigger: CAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGAAGGACATCTTGTCTaGGTTGTCCTGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: TPLFMGLMSCATITVFHSEGHLV*VVLGSQ
Trigger: CTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTGGTAACTTTATCTaGATGCCAGGTCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSGNFI*MPGPAV
Trigger: CACAGCAGGACCTGGCATTCAGATAAAGTTACCAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGGTCATTTACGTGCTaGACACCATTGTTCATGGGC +
Preference number: 2 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRSFTC*TPLFMG
Trigger: GCCCATGAACAATGGTGTTCAGCACGTAAATGACCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCTGGTAACTTTATCTaGATGCCAGGTCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSGNFI*MPGPAV
Trigger: CACAGCAGGACCTGGCATTCAGATAAAGTTACCAGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCACCTCATCAAAGCTaGTTAGAGAAGCATCCGGAT +
Preference number: 2 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPPHQS*LEKHPD
Trigger: ATCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATCAAGTCTGTAGTTTaGCATTTACTGTACATGAGT +
Preference number: 2 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPIKSVV*HLLYMS
Trigger: ACTCATGTACAGTAAATGCCAAACTACAGACTTGAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CCA 72 bp GCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCGGCTaGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTG +
Preference number: 3 (lower is better)
Translates to: ALITLERKERLG*ELPGLSRWGIL
Trigger: CAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR GCA 72 bp TCACCCTTGAGAGGAAGGAGCGTCTCGGCTGGGAGCTaGCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SPLRGRSVSAGS*RGCRGGASCCL
Trigger: CAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTTCCTCTCAAGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CAA 90 bp CTGCTTCAGCTTGCTGGCTGTGTCGGTGCGGTTCTCTCGAGCCAGCCGCCGGTAGTCCTCTCGGCCGACTaGAGCCAGTCCTCGAAGCGA +
Preference number: 3 (lower is better)
Translates to: LLQLAGCVGAVLSSQPPVVLSAD*SQSSKR
Trigger: TCGCTTCGAGGACTGGCTCAAGTCGGCCGAGAGGAC...TACCGGCGGCTGGCTCGAGAGAACCGCACCGACACAGCCAGCAAGCTGAAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR CAA 90 bp AGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTGTCTCCTCCTCCTCCTCCGCAAGGAGCTGACTaGAGGCTGACGGGCTACCAA +
Preference number: 3 (lower is better)
Translates to: SCRGCRGGASCCLSPPPPPQGAD*RLTGYQ
Trigger: TTGGTAGCCCGTCAGCCTCAAGTCAGCTCCTTGCGG...AGGAGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR TCA 72 bp GCAGCAGCAGAAGCAGCTGCAACGGTAGCGCTGCCCTaGTCACCCTTGAGAGGAAGGAGCGTCTCGGCTGGG +
Preference number: 3 (lower is better)
Translates to: AAAEAAATVALP*SPLRGRSVSAG
Trigger: CCCAGCCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR GCA 72 bp TACCTGAGTCTCCGCAGGATGGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGGTTGCCCTCGTGCACC +
Preference number: 3 (lower is better)
Translates to: YLSLRRMAVTRF*RLSQRWLPSCT
Trigger: GGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCATCCTGCGGAGACTCAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR CAA 90 bp AGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCGCTCCCAGAGTCCACTaGGACAAGAGGAGGGAGTCC +
Preference number: 3 (lower is better)
Translates to: SSCNGSAALITLERKERLAPRVH*DKRRES
Trigger: GGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGC...GAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR GCA 72 bp CGCTTCTGCAGATTGTCCCAGCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCTTGCTGGCTGTGTCGGTG +
Preference number: 3 (lower is better)
Translates to: RFCRLSQRWLPS*TICFSLLAVSV
Trigger: CACCGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CCA 72 bp CAGCTGGTGGAACCTTCTAGGTGGGAGGTGGCCCGTTaGTGTACCGCAGCATGGGGTAGAAGGATCGGGCAA +
Preference number: 3 (lower is better)
Translates to: QLVEPSRWEVAR*CTAAWGRRIGQ
Trigger: TTGCCCGATCCTTCTACCCCATGCTGCGGTACACCAACGGGCCACCTCCCACCTAGAAGGTTCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CCA 72 bp TGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTaGCCCGTTGGTGTACCGCAGCATGGGGTAGAAGGA +
Preference number: 3 (lower is better)
Translates to: WHCSWWNLLGGR*PVGVPQHGVEG
Trigger: TCCTTCTACCCCATGCTGCGGTACACCAACGGGCCACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CCA 72 bp TTGTGGTCAACAGGCTGTCGGCCATGGCACTGCAGCTaGTGGAACCTTCTAGGTGGGAGGTGGCCCGTTGGT +
Preference number: 3 (lower is better)
Translates to: LWSTGCRPWHCS*WNLLGGRWPVG
Trigger: ACCAACGGGCCACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTTGACCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CCA 72 bp CGAGCTGAGCACTTGTGGTCAACAGGCTGTCGGCCATaGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: RAEHLWSTGCRP*HCSWWNLLGGR
Trigger: CCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTTGACCACAAGTGCTCAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CCA 72 bp ATGGCTGTGACCCGCTTCTGCAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATCTGCTTCAGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: MAVTRFCRLSQR*LPSCTICFSLL
Trigger: CAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR CAA 90 bp CTGGTTGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCTGTGTCGGTGCGGTTGCTCCTCTTTGGCATTaGTATACAACACCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: LVALVHHLLQLAGCVGAVAPLWH*YTTPRR
Trigger: CCTCCGAGGTGTTGTATACAAATGCCAAAGAGGAGC...AACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CCA 72 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTaGACCTTGTCAAGGCAAAGTCACTCCGGGGTTAGT +
Preference number: 3 (lower is better)
Translates to: LPESTWTRGGSP*TLSRQSHSGVS
Trigger: ACTAACCCCGGAGTGACTTTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR TCA 72 bp GTTCAGTTGGCGCATCTTGTCCTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGTCAGCTGCAGGTCCAT +
Preference number: 3 (lower is better)
Translates to: VQLAHLVLSVTL*EVFYVGQLQVH
Trigger: ATGGACCTGCAGCTGACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CCA 72 bp GTGTTCAGTGTGATCTCCTGTTGGAAGCCGTTCAGTTaGCGCATCTTGTCCTCAGCGTCACTCTCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: VFSVISCWKPFS*RILSSASLSEK
Trigger: CTTCTCAGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCAACAGGAGATCACACTGAACAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCTCCCAGAGTCCACTaGGACAAGAGGAGGGAGTCC +
Preference number: 3 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGAPRVH*DKRRES
Trigger: GGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CAA 90 bp GCATCCTGCTGTCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTTTGAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: ASCCLSPPPPLPLPLQTLNVVFS*PLHQKA
Trigger: AGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATT...CAAAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGACAGCAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAAGGATCGGGCAAAGTaGTTGGCCTGGGTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGKDRAK*LAWVQL
Trigger: CAGCTGCACCCAGGCCAACAACTTTGCCCGATCCTT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACAGGTCCTGCTGTGCTaGATTCTCTGTTCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGQVLLC*ILCSSR
Trigger: TCTGCTGGAACAGAGAATCAAGCACAGCAGGACCTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGGTCCTGCTGTGCTaGATTCTCTGTTCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQVLLC*ILCSSR
Trigger: TCTGCTGGAACAGAGAATCAAGCACAGCAGGACCTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CAA 90 bp TTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTATGCTCTTGCAGTTGCTaGAGTTTCTTCTCGATCACG +
Preference number: 3 (lower is better)
Translates to: LQRLLGAVLLSPPHQSWLCSCSC*SFFSIT
Trigger: CGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCA...TAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR TCA 72 bp TCCGGATCCAGGCTTCTCTGCAAGGACATCAGATCTTaGGCCACTTGCTCTTGCAGTTGCTTGAGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: SGSRLLCKDIRS*ATCSCSCLSFF
Trigger: GAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGAGAAGCCTGGATCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGATCTTGAGCCACTaGCTCTTGCAGTTGCTTGAG +
Preference number: 3 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQILSH*LLQLLE
Trigger: CTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR TCA 72 bp ACATCAGATCTTGAGCCACTTGCTCTTGCAGTTGCTTaGGTTTCTTCTCGATCACGTGGACCTTCTCTTCGG +
Preference number: 3 (lower is better)
Translates to: TSDLEPLALAVA*VSSRSRGPSLR
Trigger: CCGAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAGGTCCTGCTGTGCTaGATTCTCTGTTCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQVLLC*ILCSSR
Trigger: TCTGCTGGAACAGAGAATCAAGCACAGCAGGACCTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR TCA 72 bp TTCCGGAGTTCTCTGAACCCATCTGGTAACTTTATCTaGATGCCAGGTCCTGCTGTGCTTGATTCTCTGTTC +
Preference number: 3 (lower is better)
Translates to: FRSSLNPSGNFI*MPGPAVLDSLF
Trigger: GAACAGAGAATCAAGCACAGCAGGACCTGGCATTCAGATAAAGTTACCAGATGGGTTCAGAGAACTCCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAAGGACATCAGATCTaGAGCCACTTGCTCTTGCAG +
Preference number: 3 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQGHQI*SHLLLQ
Trigger: CTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTATCAAGTCTGTAGTTaGGCATTTACTGTACATGAG +
Preference number: 3 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPYQVCS*AFTVHE
Trigger: CTCATGTACAGTAAATGCCAAACTACAGACTTGATA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CCA 72 bp ATATCACAAATAGTTCCAAGTTTCTTTACCAACCCCTaGTGGCCAAACAGCTCAACCAGACCTGAAGTATCT +
Preference number: 3 (lower is better)
Translates to: ISQIVPSFFTNP*WPNSSTRPEVS
Trigger: AGATACTTCAGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTATTTGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTATCAAGTCTGTAGTTaGGCATTTACTGTACATGAG +
Preference number: 3 (lower is better)
Translates to: TPLFMGLMSCATITVFHSYQVCS*AFTVHE
Trigger: CTCATGTACAGTAAATGCCAAACTACAGACTTGATA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp AAGGAGCGTCTCGGCTGGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGGGGCTGTCAGGAACATaGCACGGGTGGCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KERLGWELPGLSRWGILLGLSGT*HGWPSE
Trigger: TTCTGAGGGCCACCCGTGGCATGTTCCTGACAGCCC...CAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp AGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTGTCTCCTCCTCCTCCTTCTGCTTCAGCTTGCTaGCTGTGTCGGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SCRGCRGGASCCLSPPPPSASAC*LCRCGS
Trigger: AGAACCGCACCGACACAGCCAGCAAGCTGAAGCAGA...AGGAGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp AGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTGTCTCCTCCTCCTCCTGTGGCTTCGGGGCTCTaGCTTGGCAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCRGCRGGASCCLSPPPPVASGL*LGRYSL
Trigger: CAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCAC...AGGAGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 72 bp AGTCTCCGCAGGATGGCTGTGACCCGCTTCTGCAGATaGTCCCAGCGCTGGTTGCCCTCGTGCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SLRRMAVTRFCR*SQRWLPSCTIC
Trigger: GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGCCATCCTGCGGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCACGCAGCGACCTGGTaGATGAGGCTGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHAATW*MRLVQP
Trigger: AGGCTGGACCAGCCTCATGCACCAGGTCGCTGCGTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACACCAGCTTCTGGTCTaGGGCCGCCAGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHQLLV*GRQEAG
Trigger: TCCAGCCTCCTGGCGGCCGCAGACCAGAAGCTGGTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCGCTCTCCGTGTCTTaGAGCTGCTGCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKALSVS*SCCWDA
Trigger: GGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCCAGAGCTGCAGCTaGCCTCGGGCCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFQSCS*PRASCN
Trigger: GTTGCAGGAGGCCCGAGGGCAGCTGCAGCTCTGGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACGGCCTCCTGCTGAGTaGTCCCACAGTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRPPAE*SHSLPG
Trigger: GCCTGGGAGACTGTGGGACCACTCAGCAGGAGGCCG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGCCGCTGTCCAGAATaGAGCCCAGGGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCRCPE*SPGVLR
Trigger: GCGCAGCACCCCTGGGCTCCATTCTGGACAGCGGCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AAGGAGCGTCTCGGCTGGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGCACACTCCGTTTCATTaGCACAGGCATCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KERLGWELPGLSRWGILLHTPFH*HRHQSH
Trigger: ATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTG...CAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp AGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTGTCTCCTCCTCCTCCTGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCRGCRGGASCCLSPPPPAVPLK*PAAHLP
Trigger: AGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGC...AGGAGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACCGGGGCTGTCGAGGTaGGGCATCCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQPGLSR*GILLSV
Trigger: GACAGACAGCAGGATGCCCCACCTCGACAGCCCCGG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGGGAGGTGGCCCGTTaGTGTACCGCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKWEVAR*CTAAWG
Trigger: ACCCCATGCTGCGGTACACCAACGGGCCACCTCCCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp GCTGTGACCCGCTTCTGCAGATTGTCCCAGCGCTGGTaGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AVTRFCRLSQRW*PSCTICFSLLA
Trigger: AGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAGCGACCTGGTGCATaGGGCTGGTCCAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQRPGA*GWSSLV
Trigger: GACAAGGCTGGACCAGCCTCATGCACCAGGTCGCTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp AGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCTGTCTCCTCCTCCTCCTTGCTCATCTTCCTGCTaGGCCTCCTTTAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SCRGCRGGASCCLSPPPPCSSSC*ASFKPS
Trigger: AGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCA...AGGAGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGCCTGAGCTTGCTGTaGAGCTCCTGCGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSLSLL*SSCAWI
Trigger: GATCCAGGCGCAGGAGCTTCACAGCAAGCTCAGGCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACACGCAGCGACCTGGTaGATGAGGCTGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHAATW*MRLVQP
Trigger: AGGCTGGACCAGCCTCATGCACCAGGTCGCTGCGTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCACCAGCTTCTGGTCTaGGGCCGCCAGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDHQLLV*GRQEAG
Trigger: TCCAGCCTCCTGGCGGCCGCAGACCAGAAGCTGGTG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAGCTGCTGCTGGGATaGCTTCAGGATGGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQLLLG*LQDGEA
Trigger: CGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGACACTCGGAGGCGCCTaGAGAGGGCTTGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKTLGGA*RGLVSY
Trigger: GTAGGAGACAAGCCCTCTGCAGGCGCCTCCGAGTGT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTCCAGAGCTGCAGCTaGCCTCGGGCCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFQSCS*PRASCN
Trigger: GTTGCAGGAGGCCCGAGGGCAGCTGCAGCTCTGGAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTGCTGCAGCCAGGCTaGCGCTTCTGCGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLLQPG*RFCVSI
Trigger: AATGCTCACGCAGAAGCGGCAGCCTGGCTGCAGCAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp AGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCCCATCTGCTTCAGCTTaGTGGCTGTGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SSCNGSAALITLERKERLPSASA*WLCRCG
Trigger: ACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGG...GAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGGCTGTCAGGAACATaGCACGGGTGGCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGLSGT*HGWPSE
Trigger: TTCTGAGGGCCACCCGTGGCATGTTCCTGACAGCCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCATGCGCCTTCTGCCTaGGGCTCTCTGCTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHAPSA*GSLLSL
Trigger: TAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp AGCAGAAGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCATGCGCCTTCTGCCTaGGGCTCTCTGCTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: SRSSCNGSAALITLERKEHAPSA*GSLLSL
Trigger: TAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATG...CTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CGCTGGTTGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCTGTGTCGGTGCGGTCTCCTCGATTCTGCTaGTCAGCAAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RWLPSCTICFSLLAVSVRSPRFC*SASLFW
Trigger: CCAGAAGAGGCTTGCTGAGCAGCAGAATCGAGGAGA...CCGCACCGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGCTTGGTTCCCGTCTaGGGCAGCCTCAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGLVPV*GSLSST
Trigger: AGTGGAACTGAGGCTGCCCCAGACGGGAACCAAGCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCGCGATCTGGCCCTCTaGCTCAGGACAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRDLAL*LRTAHR
Trigger: TCTGTGAGCTGTCCTGAGCCAGAGGGCCAGATCGCG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCGCTCCTCAGGCTGTaGCAGCTGATCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQALLRL*QLIREG
Trigger: ACCCTCTCGGATCAGCTGCCACAGCCTGAGGAGCGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AAGGAGCGTCTCGGCTGGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTCAAACTCTTCCCTCTaGTTGGTGAAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: KERLGWELPGLSRWGILLSNSSL*LVKYLS
Trigger: ACTCAGGTACTTCACCAACCAGAGGGAAGAGTTTGA...CAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGTGACTGGGGAGATGTaGGCTCCTCGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKVTGEM*APRSLS
Trigger: GGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCAC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCGGGGCTGTCGAGGTaGGGCATCCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPGLSR*GILLSV
Trigger: GACAGACAGCAGGATGCCCCACCTCGACAGCCCCGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCTCAGCTTCCTTTCTaGAGCATCCCTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKAQLPF*SIPLGH
Trigger: GTGGCCGAGAGGGATGCTTCAGAAAGGAAGCTGAGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTTCGGCCTCCTCCTTaGCCACTGGCAGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLRPPP*PLAGKT
Trigger: TGTCTTTCCTGCCAGTGGTCAAGGAGGAGGCCGAAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGCTCCGCCATGCCTTaGAGCAAGGTCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSSAMP*SKVCRL
Trigger: GAGCCTGCAGACCTTGCTTCAAGGCATGGCGGAGCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGACGTTCAATGTCAGGTaGCTGGGCTGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKTFNVR*LGCQGQ
Trigger: CTGGCCCTGACAGCCCAGTCACCTGACATTGAACGT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGCCTGAGCTTGCTGTaGAGCTCCTGCGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSLSLL*SSCAWI
Trigger: GATCCAGGCGCAGGAGCTTCACAGCAAGCTCAGGCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCCGTGTCTTGCAGCTaGTGCTGGGATGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSVSCS*CWDAFR
Trigger: CCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACACTCGGAGGCGCCTaGAGAGGGCTTGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTLGGA*RGLVSY
Trigger: GTAGGAGACAAGCCCTCTGCAGGCGCCTCCGAGTGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGGAACTTTGCTTCCTaGTGCTGCAGCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKWNFAS*CCSQAA
Trigger: GGCAGCCTGGCTGCAGCAGCAGGAAGCAAAGTTCCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCTGTCTGGAGGGAGTaGCGCTGTCCAGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQAVWRE*RCPEWS
Trigger: GCTCCATTCTGGACAGCGGCACTCCCTCCAGACAGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRWLPS*TICFSL
Trigger: CAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCCCCATCTGGGTCTTaGCCTGGTCCAGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSPSGS*PGPDPL
Trigger: GAGAGGATCTGGACCAGGCCAAGACCCAGATGGGGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCTTGCAGCTGCTGCTaGGATGCCTTCAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSCSCC*DAFRMA
Trigger: CGCCATCCTGAAGGCATCCCAGCAGCAGCTGCAAGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCTTCCAGAGCCATCTaGAGGGTGCTGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSSRAI*RVLARW
Trigger: CCACCGCGCCAGCACCCTCCAGATGGCTCTGGAAGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGAGTGCAGCTTCAATaGGGGGTGTGGCACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGVQLQ*GVWHPR
Trigger: ACGAGGGTGCCACACCCCCCATTGAAGCTGCACTCC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGACAGAAGCTCTGAGCTaGTGGACCTGGCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKTEALS*WTWLVT
Trigger: CGTGACCAGCCAGGTCCACCAGCTCAGAGCTTCTGT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AGCAGAAGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGGCCTGTCCAGGCTCCTaGTGGTCTGCTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: SRSSCNGSAALITLERKEACPGS*WSAGLS
Trigger: ACTCAATCCAGCAGACCACCAGGAGCCTGGACAGGC...CTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRLSQR*LPSCTI
Trigger: GATGGTGCACGAGGGCAACCAGCGCTGGGACAATCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCTGGAAGCCGTTCAGTTaGCGCATCTTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSCNGSAALITLERKERLWKPFS*RILSSA
Trigger: CGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCA...GAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp ACCTCATCAAAGCTGGTTAGAGAAGCATCCGGATCCAGGCTTCTCTGCAAGGACTCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TSSKLVREASGSRLLCKDSKPGV*EVRRRW
Trigger: CCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGA...GTCCTTGCAGAGAAGCCTGGATCCGGATGCTTCTCTAACCAGCTTTGATGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCCCGGGCTCCTCCTaGCTCGCCCACGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFPGSS*LAHGCR
Trigger: TCGGCAGCCGTGGGCGAGTCAGGAGGAGCCCGGGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTCCAGGAGGCAGGTaGGTTCGCTGTGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSPGGR*VRCVLW
Trigger: CCACAGAACACAGCGAACTCACCTGCCTCCTGGAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACCGCCATCGTGTTCTTaGCCCAGGACAGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQPPSCS*PRTESP
Trigger: AGGAGACTCTGTCCTGGGTCAAGAACACGATGGCGG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGCTCCGCCATGCCTTaGAGCAAGGTCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSSAMP*SKVCRL
Trigger: GAGCCTGCAGACCTTGCTTCAAGGCATGGCGGAGCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGGGCAGCGAAGAGATaGGAGCTTCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRAAKR*ELPGPS
Trigger: AGAAGGACCTGGAAGCTCTCATCTCTTCGCTGCCCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACGTTCAATGTCAGGTaGCTGGGCTGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTFNVR*LGCQGQ
Trigger: CTGGCCCTGACAGCCCAGTCACCTGACATTGAACGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCCGGAGGCACAAGGTaGCACAGTGACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAGGTR*HSDWGD
Trigger: ATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGCCTGAGCTTGCTGTaGAGCTCCTGCGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSLSLL*SSCAWI
Trigger: GATCCAGGCGCAGGAGCTTCACAGCAAGCTCAGGCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp AGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCGCAGTCTCTTCACCCTaGGCGCTATTTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SSCNGSAALITLERKERLAVSSP*ALFPGC
Trigger: ACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGC...GAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGTCCTGGCACTGCATaGGTGACTGCCGTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSPGTA*VTAVSL
Trigger: GAGACTTACGGCAGTCACTCATGCAGTGCCAGGACT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCTCCTGCTGTAGACTaGCCAAGTGGCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKAPAVD*PSGTLK
Trigger: CTTCAGTGTGCCACTTGGGCAGTCTACAGCAGGAGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCGTGTCTTGCAGCTaGTGCTGGGATGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSVSCS*CWDAFR
Trigger: CCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCCACACTCTCCTGGTaGTGGCACAGAGAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSTLSW*WHRESN
Trigger: GTTGGACTCTCTGTGCCAGCACCAGGAGAGTGTGGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGGGCCAGCAGCAGCTaGTGCTTCTCCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRASSS*CFSTLS
Trigger: GGAGAGTGTGGAGAAGCAGCAGCTGCTGCTGGCCCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACGTGGCTTCCTTaGCAGGCCAAGTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKATWLP*QAKSQL
Trigger: AAGCTGTGACTTGGCCTGGCAAGGAAGCCACGTTGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTTCCGTGCACTCGCTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTGCTGCAGCCAGGCTaGCGCTTCTGCGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLLQPG*RFCVSI
Trigger: AATGCTCACGCAGAAGCGGCAGCCTGGCTGCAGCAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCCTCTTTGGTCTTCTaGAGGTCACTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQASLVF*RSLCSP
Trigger: GGGGCTGCAGAGTGACCTGCAGAAGACCAAAGAGGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTGTCTGGAGGGAGTaGCGCTGTCCAGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAVWRE*RCPEWS
Trigger: GCTCCATTCTGGACAGCGGCACTCCCTCCAGACAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGGATCTTCGCTTTGTaGCTTCAGAGCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGIFAL*LQSLQP
Trigger: AGGCTGCAGGCTCTGAAGGCACAAAGCGAAGATCCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACCATCTGCTTCAGCTTaGTGGCTGTGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQPSASA*WLCRCG
Trigger: ACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAVTRF*RLSQRW
Trigger: CCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCCCATCTGGGTCTTaGCCTGGTCCAGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSPSGS*PGPDPL
Trigger: GAGAGGATCTGGACCAGGCCAAGACCCAGATGGGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGCGTGCTGTCCCACTaGTTGCTGAGGTCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSVLSH*LLRSVK
Trigger: CTTTACGGACCTCAGCAACCAGTGGGACAGCACGCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCACACTTGATTGCCTaGAGCTCAGCGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSHLIA*SSAAGV
Trigger: CACTCCAGCCGCTGAGCTCCAGGCAATCAAGTGTGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTGCATTCTTCCACCTaGGATCCGATCTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLHSST*DPISAG
Trigger: CCCTGCGGAGATCGGATCCCAGGTGGAAGAATGCAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGAGTGCAGCTTCAATaGGGGGTGTGGCACCCTCGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGVQLQ*GVWHPR
Trigger: ACGAGGGTGCCACACCCCCCATTGAAGCTGCACTCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTCCTTCAGGGCCCGTaGCAGGATATCTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVLQGP*QDICQV
Trigger: AACCTGGCAGATATCCTGCCACGGGCCCTGAAGGAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCAATGTCAGGTGACTaGGCTGTCAGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSMSGD*AVRAST
Trigger: CGTGCTGGCCCTGACAGCCCAGTCACCTGACATTGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AGCGCTGGTTGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCTGTGTCGGTGCCGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGC +
Preference number: 4 (lower is better)
Translates to: SAGCPRAPSASACWLCRCRRQQA*RAQTQC
Trigger: GCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACG...GCACCGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR CCA 90 bp GTGACCCGCTTCTGCAGATTGTCCCAGCGCTGGTTGCCCTCGTGCACCATCTGCTCAGCAAGCCTCTTCTaGATCTCCTGGTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: VTRFCRLSQRWLPSCTICSASLF*ISWLSQ
Trigger: CTGCGATAACCAGGAGATCCAGAAGAGGCTTGCTGA...GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGTCCAGGCTCCTGGTaGTCTGCTGGATTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKCPGSW*SAGLSH
Trigger: GTGACTCAATCCAGCAGACCACCAGGAGCCTGGACA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCTGCTTCAGCTTGCTaGCTGTGTCGGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSASAC*LCRCGS
Trigger: AGAACCGCACCGACACAGCCAGCAAGCTGAAGCAGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGGAAGCCGTTCAGTTaGCGCATCTTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKWKPFS*RILSSA
Trigger: CGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAGCCTGGATCTCCCTaGGGTCTTCTATGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQPGSP*GLLCPS
Trigger: AGACGGACATAGAAGACCCCAGGGAGATCCAGGCTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACGCCAAGAGTCAGCCTaGATCTCCCTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRQESA*ISLGSS
Trigger: AGAAGACCCCAGGGAGATCCAGGCTGACTCTTGGCG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAGTGCGCTGTAGAATaGGCCCTCCTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQCAVE*ALLVVF
Trigger: GAAGACGACGAGGAGGGCCCATTCTACAGCGCACTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGCGTGCTGGCATCTGTaGGGACTGGTGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LGAVLLSPPHQSWLEKHPACWHL*GLVPQS
Trigger: GGACTGAGGCACCAGTCCCCACAGATGCCAGCACGC...CGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLSAIS*MSEGGS
Trigger: CGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGTGGCTTCGGGGCTCTaGCTTGGCAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKVASGL*LGRYSL
Trigger: CAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCAC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TCTTGCAGTTGCTTGAGTTTCTTCTCGATCACGTGGACCTTCTCTTCGGCCTCACACTCCAGGAGGACCTaGCGGTCGGCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCSCLSFFSITWTFSSASHSRRT*RSASGL
Trigger: CAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTG...TGAGGCCGAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCCTTCACCAGAAGGCTaGAGGAAATCTCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKPSPEG*RKSPAR
Trigger: CCTTGCGGGAGATTTCCTCCAGCCTTCTGGTGAAGG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTCTGCTGCCATAGCTaGCTCCTTAGACAGACTCGT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLCCHS*LLRQTR
Trigger: ACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCGAAGCTTGCTCAGTaGGCCTTGCTGGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQAKLAQ*ALLVFH
Trigger: GTGGAAAACCAGCAAGGCTCACTGAGCAAGCTTCGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCTCCAGGAGGCAGGTaGGTTCGCTGTGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSPGGR*VRCVLW
Trigger: CCACAGAACACAGCGAACTCACCTGCCTCCTGGAGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGGCGCTGTTGCTGCTaGTGCAGAGAAACCTTAAGG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRRCCC*CRETLR
Trigger: CCTTAAGGTTTCTCTGCATCAGCAGCAACAGCGCCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGCATCTCAGGTGTCTaGGGAGCTGACGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKCISGV*GADGVS
Trigger: TGAAACTCCGTCAGCTCCTCAGACACCTGAGATGCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTGGCTAAGGGTCCTTaGAGAGTCATAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVAKGP*RVIAGR
Trigger: CCTGCCTGCTATGACTCTTCAAGGACCCTTAGCCAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCACCCTTGATCCGATaGCGTCAAAGAGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSPLIR*RQRDAA
Trigger: GGCAGCATCTCTTTGACGTCATCGGATCAAGGGTGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp AACAGGCTGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTGCTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGT +
Preference number: 4 (lower is better)
Translates to: NRLSAMALQLVEPSRWEVLSVTL*EVFYVG
Trigger: ACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAG...CACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCCACGTCACCTGTGTaGTCCCACTCCAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPTSPV*SHSRGI
Trigger: TATCCCTCTGGAGTGGGATCACACAGGTGACGTGGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAGTCTCTTCACCCTaGGCGCTATTTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKAVSSP*ALFPGC
Trigger: ACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCGCTGCTCCTCTCCTaGTCACTGGCAAAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDALLLS*SLAKSD
Trigger: GTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAACTCACACTTGATTaGCTGGAGCTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKLTLD*LELSGW
Trigger: CCAGCCGCTGAGCTCCAGGCAATCAAGTGTGAGTTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGAGAGTCCAACAACTaGCAGAGTTCCTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRESNN*QSSSVG
Trigger: TCCCACCGAGGAACTCTGGCAGTTGTTGGACTCTCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCGTTCAGCTTGGAATaGCAGAGGTCGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSFSLE*QRSSSS
Trigger: GGATGAGCTCGACCTCTGGCATTCCAAGCTGAACGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTTCATTCTGGTAGCTaGGGCTGTGCTCAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLHSGS*GCAQGR
Trigger: CCGGCCTTGAGCACAGCCGCAGCTACCAGAATGAAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCCCATTTCTGTAGCATaGTCTGAAGCTGCGCACCAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKPISVA*SEAAHH
Trigger: GTGGTGCGCAGCTTCAGAGCATGCTACAGAAATGGG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCATCTCCCCGAGGTaGTCAGCAAACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFISPR*SANSVL
Trigger: AAGGACGGAGTTTGCTGAGCACCTCGGGGAGATGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTGCCAATGACCTCCTaGAGTTTCTCCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLPMTS*SFSQLR
Trigger: ACGGAGCTGGGAGAAACTGCAGGAGGTCATTGGCAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGGAACTTTGCTTCCTaGTGCTGCAGCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDWNFAS*CCSQAA
Trigger: GGCAGCCTGGCTGCAGCAGCAGGAAGCAAAGTTCCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCCTCTTTGGTCTTCTaGAGGTCACTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDASLVF*RSLCSP
Trigger: GGGGCTGCAGAGTGACCTGCAGAAGACCAAAGAGGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGAGCCCAGGGGTGCTaGGCTCCTCAGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGAQGC*APQAVA
Trigger: TGCCACAGCCTGAGGAGCGCAGCACCCCTGGGCTCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCGCTGCAGATCCTGCTaGTCAGCAAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRCRSC*SASLFW
Trigger: CCAGAAGAGGCTTGCTGAGCAGCAGGATCTGCAGCG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCATCTGCTTCAGCTTaGTGGCTGTGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPSASA*WLCRCG
Trigger: ACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRWLPS*TICFSL
Trigger: CAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTTCCACTCCAAACTTTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLQTLQRLLGAVLLSPPAVTRF*RLSQRW
Trigger: CCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGC...AGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCTCTCCTGCTCACTaGCAAAGTCAGACGTCACCC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSSPAH*QSQTSP
Trigger: GGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCAGTCATCCCCATCTaGGTCTTGGCCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSVIPI*VLAWSR
Trigger: TCTGGACCAGGCCAAGACCCAGATGGGGATGACTGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGAAACCTTAAGGTCCTaGAGCTTCTCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKETLRS*SFSRRQ
Trigger: CTGCCTCCTGGAGAAGCTCCAGGACCTTAAGGTTTC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACTGCTGCCACTCTCTaGCGGCTTCCAGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTAATL*RLPANS
Trigger: TGAGTTTGCTGGAAGCCGCCAGAGAGTGGCAGCAGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTCTTGCGCCTGTCCTaGGTCCTGCTCGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDFLRLS*VLLDEV
Trigger: GACTTCGTCGAGCAGGACCCAGGACAGGCGCAAGAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGCAGGTCGGCCACTTaGTTCTGTGACACATGTTCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGRSAT*FCDTCS
Trigger: TGAACATGTGTCACAGAACCAAGTGGCCGACCTGCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAGAGGCTCTCAGTGTaGCCGTGTCTGCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKRLSV*PCLPLS
Trigger: TGAAAGAGGCAGACACGGCCACACTGAGAGCCTCTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGAAGCTCTGAGCTGGTaGACCTGGCTGGTCACGTTA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQEALSW*TWLVTL
Trigger: TAACGTGACCAGCCAGGTCCACCAGCTCAGAGCTTC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACACAGAAGCTCTGAGCTaGTGGACCTGGCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDTEALS*WTWLVT
Trigger: CGTGACCAGCCAGGTCCACCAGCTCAGAGCTTCTGT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTGGCCTTGATCAGCTaGTCGCCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLALIS*SPICFS
Trigger: GCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGTCCAGGCTCCTGGTaGTCTGCTGGATTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCPGSW*SAGLSH
Trigger: GTGACTCAATCCAGCAGACCACCAGGAGCCTGGACA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGGAAGCCGTTCAGTTaGCGCATCTTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQWKPFS*RILSSA
Trigger: CGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSKPGV*EVRRRW
Trigger: CCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSKPGV*EVRRRW
Trigger: CCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AACAGGCTGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTGGGAACATGCCACGGGTaGCCCTCAGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: NRLSAMALQLVEPSRWEVGTCHG*PSEMDL
Trigger: TAAATCCATTTCTGAGGGCCACCCGTGGCATGTTCC...CACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTGGCTTCGGGGCTCTaGCTTGGCAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVASGL*LGRYSL
Trigger: CAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACACTCCAGGAGGACCTaGCGGTCGGCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLHSRRT*RSASGL
Trigger: CAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGACAGAGGACTCCATaGCCTGCAGTTCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGQRTP*PAVQVV
Trigger: AACCACTTGAACTGCAGGTCATGGAGTCCTCTGTCC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGATTCTGCAGCTCGTTaGCTTCCCGCTCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDDSAAR*LPAHLG
Trigger: CCCAAGATGAGCGGGAAGTCAACGAGCTGCAGAATC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAGAGTGCTTTCTGGTaGCATACTGGGGACTTTCAG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQSAFW*HTGDFQ
Trigger: CTGAAAGTCCCCAGTATGTCACCAGAAAGCACTCTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTCTGGGATACTTGTTaGTGTTGCTGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLWDTC*CCWKGA
Trigger: GGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGAGGAAGGGGCTGCTaGGTTCTAAGTATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRGRGC*VLSIWL
Trigger: GAGCCAGATACTTAGAACTCAGCAGCCCCTTCCTCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCACCCTTGATCCGATaGCGTCAAAGAGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSPLIR*RQRDAA
Trigger: GGCAGCATCTCTTTGACGTCATCGGATCAAGGGTGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGTGGTCTGCTGGATTaGGTCACACTCCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGGLLD*VTLRFI
Trigger: AATGAAACGGAGTGTGACTCAATCCAGCAGACCACC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp AGCAGAAGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCATGCGTCGCTCCATTaGCATGGCACAAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRSSCNGSAALITLERKEHASLH*HGTNVP
Trigger: AGGAACATTTGTGCCATGTCAATGGAGCGACGCATG...CTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCATGCGTCGCTCCATTaGCATGGCACAAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHASLH*HGTNVP
Trigger: AGGAACATTTGTGCCATGTCAATGGAGCGACGCATG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGTTGGTGTTCAGTGTaGTCTCCTGTTGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKCWCSV*SPVGSR
Trigger: ACGGCTTCCAACAGGAGATCACACTGAACACCAACA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTCCCCAAACACGATaGGCTGGTCGATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAPQTR*AGRSCW
Trigger: CCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCAATCTCAACAGGATaGAGGTCCTGGACAGCCACT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSISTG*RSWTAT
Trigger: AGTGGCTGTCCAGGACCTGCATCCTGTTGAGATTGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAGCCTGCTTCTTGCTaGTTCTTCAGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKPASC*FFSSVS
Trigger: GCTCACAGAGCTGAAGAAGCAGCAAGAAGCAGGCTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGATTTTTAACTGGGCCTaGTTCTCTGGCAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKIFNWA*FSGNPG
Trigger: GCCTGGGTTGCCAGAGAAGCAGGCCCAGTTAAAAAT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGGCTCTCATGCAGGTaGTTCACTTCTAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRLSCR*FTSSHG
Trigger: GCCGTGGCTAGAAGTGAAGCACCTGCATGAGAGCCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTTGGAAACGGAGTCTaGTCTCCAGCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLGNGV*SPAPVT
Trigger: AGTTACAGGAGCTGGAGAGCAGACTCCGTTTCCAAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACACTCGGTGCGAAGCTTaGTCAGTGAGCCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDTRCEA*SVSLAG
Trigger: ACCAGCAAGGCTCACTGAGCAAGCTTCGCACCGAGT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCACCCATGTTCAAGGTaGTTCATTTGGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHPCSR*FIWLST
Trigger: GGTGGAGAGCCAAATGAAGCACCTTGAACATGGGTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGGCATCGTTTTCTGTaGTCCTGCATCTCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKWHRFL*SCISGV
Trigger: GACACCTGAGATGCAGGAGCACAGAAAACGATGCCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCAACGTGGCTTCCTTaGCAGGCCAAGTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDATWLP*QAKSQL
Trigger: AAGCTGTGACTTGGCCTGGCAAGGAAGCCACGTTGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCCGGCCTTCAGGGATaGGTCCCTCCAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLAGLQG*VPPGSS
Trigger: AGAGCTGCCTGGAGGGACGCATCCCTGAAGGCCGGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAGCCTTTCTTCCTGTaGCTCCAACCAGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQPFFL*LQPAVQ
Trigger: TTGAACAGCTGGTTGGAGGCACAGGAAGAAAGGCTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAGCTGTTGGAACTTTaGTTCCTGCTGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKLLEL*FLLLQP
Trigger: TGGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGAGCCCAGGGGTGCTaGGCTCCTCAGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGAQGC*APQAVA
Trigger: TGCCACAGCCTGAGGAGCGCAGCACCCCTGGGCTCC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGCTGGTCGCCCATCTaGTTCAGCTGCAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSWSPI*FSCSLF
Trigger: AAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGACGCTGCAGATCCTGCTaGTCAGCAAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSCSPESTSSKLVREASGRCRSC*SASLFW
Trigger: CCAGAAGAGGCTTGCTGAGCAGCAGGATCTGCAGCG...TCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CCTTCTAGGTGGGAGGTGGCCCGTTGGTGTACCGCAGCATGGGGTAGAAGGATCCTTTGCTGTCATCGGTaGCTTGACGTAATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSRWEVARWCTAAWGRRILCCHR*LDVIAA
Trigger: AGCTGCTATTACGTCAAGGCACCGATGACAGCAAAG...GATCCTTCTACCCCATGCTGCGGTACACCAACGGGCCACCTCCCACCTAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCACTGCATGAGTGACTaGCGTAAGTCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDHCMSD*RKSPRQ
Trigger: CTGGCGAGGAGACTTACGGCAGTCACTCATGCAGTG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCATGGTCTCCAGCTaGAGTCTGCACTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFMVSS*SLHFST
Trigger: TGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGTTCGCTGTGTTCTGTaGCTTGCTGGAAACACTTCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKVRCVL*LAGNTS
Trigger: GGAAGTGTTTCCAGCAAGCCACAGAACACAGCGAAC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCGGCCTCCTGCTGAGTaGTCCCACAGTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRPPAE*SHSLPG
Trigger: GCCTGGGAGACTGTGGGACCACTCAGCAGGAGGCCG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGCCGCTGTCCAGAATaGAGCCCAGGGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPCRCPE*SPGVLR
Trigger: GCGCAGCACCCCTGGGCTCCATTCTGGACAGCGGCA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCGTCAGCGACTGCCTaGTTTGTAGAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQASATA*FVETSA
Trigger: AGCTGAAGTCTCTACAAACCAGGCAGTCGCTGACGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRRQQA*RAQTQC
Trigger: GCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSKPGV*EVRRRW
Trigger: CCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLSAIS*MSEGGS
Trigger: CGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTCGGGGCTCTGGCTTaGCAGATATTCCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFGALA*QIFLVA
Trigger: AGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCACTCCAGGAGGACCTaGCGGTCGGCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGHSRRT*RSASGL
Trigger: CAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCGGGGCTGTCGAGGTaGGGCATCCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPGLSR*GILLSV
Trigger: GACAGACAGCAGGATGCCCCACCTCGACAGCCCCGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp ATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTaGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ILSELSWAPRVH*DKRRESLDLVK
Trigger: CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp GTGGACCTTCTCTTCGGCCTCAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCTGGAGGAAATCTCCCG +
Preference number: 4 (lower is better)
Translates to: VDLLFGLNVVFS*PLHQKAGGNLP
Trigger: CGGGAGATTTCCTCCAGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATTGAGGCCGAAGAGAAGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGCGACCTGGTGCATaGGGCTGGTCCAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQRPGA*GWSSLV
Trigger: GACAAGGCTGGACCAGCCTCATGCACCAGGTCGCTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAACTTCTCTACTGCTaGCTCCAATCAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQLLYC*LQSGNS
Trigger: GGAGTTTCCTGATTGGAGTCAGCAGTAGAGAAGTTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCTAATTCCAGTTCTTaGCTCCTGAGCCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSNSSS*LLSQLS
Trigger: TGACAGCTGGCTCAGGAGTCAAGAACTGGAATTAGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGATGTGTGGATTCTTTaGTTGTCTCTTCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKDVWIL*LSLLPR
Trigger: CCGAGGGAGAAGAGACAATCAAAGAATCCACACATC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCACTGAACTTCTCCTaGAGCACCATCTGGACCTTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSLNFS*STIWTF
Trigger: AAAGGTCCAGATGGTGCTTCAGGAGAAGTTCAGTGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGATGCTGGTCCTCACTaGACTTCTCCTGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDDAGPH*TSPEAP
Trigger: TGGTGCTTCAGGAGAAGTTCAGTGAGGACCAGCATC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTTGCTGCTGGAAGCTaGTTGCCGATTTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLAAGS*LPICIF
Trigger: GAAGATGCAAATCGGCAATCAGCTTCCAGCAGCAAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGTCGATTCTCTTGTTaGGGGACAGCCATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGRFSC*GTAIAL
Trigger: AAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTTGTTCGCCACCTCTaGAGATGGATCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVVRHL*RWISLL
Trigger: GAGCAAAGAGATCCATCTTCAGAGGTGGCGAACAAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGTGGTCTGCTGGATTaGGTCACACTCCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGGLLD*VTLRFI
Trigger: AATGAAACGGAGTGTGACTCAATCCAGCAGACCACC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLSVTL*EVFYVG
Trigger: ACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCAGTCTCTTCACCCTaGGCGCTATTTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAVSSP*ALFPGC
Trigger: ACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGGATCTGTGCCTCATaGTGTCCATGTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKWICAS*CPCQSG
Trigger: ACCTGATTGACATGGACAGCATGAGGCACAGATCCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTTCAGCTCATGTTCTaGGATCCTGAAGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLQLMF*DPEGLF
Trigger: AAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTGCAGGCAGGCGCTaGTCCTCTCCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSAGRR*SSPAHW
Trigger: CCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCAGCCAGTAAGACCTaGAGTTCTGCCAGTTTACTC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSASKT*SSASLL
Trigger: GAGTAAACTGGCAGAACTGCAGGTCTTACTGGCTGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCTGGACAGCCACTGTaGAGAGGGGCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPGQPL*RGAGQR
Trigger: CCTCTGACCTGCCCCTCTGCACAGTGGCTGTCCAGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTCCAGCTGGAGTCTaGACTTCAGCACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSPAGV*TSAQCP
Trigger: AGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGCTGCTGCTGGGATaGCTTCAGGATGGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQLLLG*LQDGEA
Trigger: CGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTCCACCCCACTGCTaGCACTCTCTGGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSPPHC*HSLAAS
Trigger: GGAAGCCGCCAGAGAGTGGCAGCAGTGGGGTGGAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTCCACCCCACTGCTaGCACTCTCTGGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSPPHC*HSLAAS
Trigger: GGAAGCCGCCAGAGAGTGGCAGCAGTGGGGTGGAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGAAGGCTGTGTTTCTaGTCAGAATCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRRLCF*SESSRA
Trigger: GGCTCTGGAAGATTCTGAGCAGAAACACAGCCTTCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTTCCACCACCTGTTaGATGTCCGCGTCTACAGTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSSTTC*MSASTV
Trigger: AACTGTAGACGCGGACATGCAACAGGTGGTGGAAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACAGCTCACAGATGCTaGCAGCTGTCTGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTAHRC*QLSAFI
Trigger: AATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCCTTTCATAGCGCTTaGTTTCTACGTCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSFHSA*FLRHRC
Trigger: GCACCTGTGACGTAGAAAGCAAGCGCTATGAAAGGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAGCCTTTCTTCCTGTaGCTCCAACCAGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQPFFL*LQPAVQ
Trigger: TTGAACAGCTGGTTGGAGGCACAGGAAGAAAGGCTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACCGCAGGCTTGCTGTaGTCCATGGAATATGTGAGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTAGLL*SMEYVS
Trigger: ACTCACATATTCCATGGAGCACAGCAAGCCTGCGGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAATTTCTCTTCGATTATaGCAGCCATGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQISLRL*QPWRGR
Trigger: CCTGCCCCTCCATGGCTGGCATAATCGAAGAGAAAT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCCAGAGCTGCAGCTaGCCTCGGGCCTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFQSCS*PRASCN
Trigger: GTTGCAGGAGGCCCGAGGGCAGCTGCAGCTCTGGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAATGGAGCCCAGGGGTaGTGCGCTCCTCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPNGAQG*CAPQAV
Trigger: CACAGCCTGAGGAGCGCAGCACCCCTGGGCTCCATT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGAAGATGGATCTCTTTaGTCTTCAGCTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKEDGSL*SSARGP
Trigger: TGGTCCACGAGCTGAAGAGCAAAGAGATCCATCTTC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGTGCCTTCAGAGCCTaGAGCCTCTTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCAFRA*SLFFSF
Trigger: GAAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGCAAAAGCTGGATCTaGTCCTTCAGAACCGTCACG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCKSWI*SFRTVT
Trigger: CGTGACGGTTCTGAAGGAGCAGATCCAGCTTTTGCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGCTGGTCGCCCATCTaGTTCAGCTGCAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSWSPI*FSCSLF
Trigger: AAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRAQTQ*EPTRYE
Trigger: TTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACACAGACTCCACCCCTaGACTGTGTTGTTCGATATC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHRLHP*TVLFDI
Trigger: GATATCGAACAACACAGTGCAGGGGTGGAGTCTGTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TCTTGCAGTTGCTTGAGTTTCTTCTCGATCACGTGGACCTTCTCTTCGGCCTCAGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SCSCLSFFSITWTFSSASASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...TGAGGCCGAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGAATGCTCTCCCTGGTaGCCTCAAACTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDECSPW*PQTLPS
Trigger: AGAGGGAAGAGTTTGAGGGCACCAGGGAGAGCATTC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTACGTTGGTCAGCTaGAGGTCCATTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSTLVS*RSISVS
Trigger: GCTCACAGAAATGGACCTGCAGCTGACCAACGTAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCATGTCAATCAGGTCTaGTCGCAAGGCATGAATGAC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHVNQV*SQGMND
Trigger: GTCATTCATGCCTTGCGACCAGACCTGATTGACATG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTACCTTGGCCTGTGTaGAATCCCCGGGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLPWPV*NPRGQA
Trigger: CGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGAGGAGATCCAAGATaGATTTGGTTTGTGACTCCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGGDPR*IWFVTP
Trigger: GGGAGTCACAAACCAAATCCATCTTGGATCTCCTCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGACATGGTGTTCTAGCTaGCACTTGATGCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKTWCSS*HLMLSG
Trigger: TCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCCATCCTTGAATCGTaGGAGAGAGCCAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKAILES*ERASYF
Trigger: AAAATAGCTGGCTCTCTCCCACGATTCAAGGATGGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCCCCTGCTCGGGCCTaGCATATGGACTCCATATTT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSPARA*HMDSIF
Trigger: AAATATGGAGTCCATATGCCAGGCCCGAGCAGGGGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTTTGCACAGAATCCTaGAGCTGCTGGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFCTES*SCWRRL
Trigger: GAGCCTTCTCCAGCAGCTCCAGGATTCTGTGCAAAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGAAACCTTAAGGTCCTaGAGCTTCTCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDETLRS*SFSRRQ
Trigger: CTGCCTCCTGGAGAAGCTCCAGGACCTTAAGGTTTC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTTCCAGAGCCATCTaGAGGGTGCTGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSSRAI*RVLARW
Trigger: CCACCGCGCCAGCACCCTCCAGATGGCTCTGGAAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCTGAGCCTCGGGGATaGTGCTGGTCCTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLAEPRG*CWSFLG
Trigger: ACCGAGGAAGGACCAGCACCATCCCCGAGGCTCAGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAAGAGGCTCTCAGTGTaGCCGTGTCTGCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDKRLSV*PCLPLS
Trigger: TGAAAGAGGCAGACACGGCCACACTGAGAGCCTCTT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGCACTCGCTGCCACTaGCGGTTCATCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPCTRCH*RFISPR
Trigger: CCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGATGGAATATGTGAGTTaGGTTGTCCTCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKMEYVS*VVLMVA
Trigger: GGCCACCATGAGGACAACCCAACTCACATATTCCAT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGTCTCCAGACAGATTaGTGTTGGCAAGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKCLQTD*CWQAVG
Trigger: TCCAACAGCTTGCCAACACCAATCTGTCTGGAGACA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCGCTCCTCAGGCTGTaGCAGCTGATCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGALLRL*QLIREG
Trigger: ACCCTCTCGGATCAGCTGCCACAGCCTGAGGAGCGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCGCTCCTCAGGCTGTaGCAGCTGATCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPALLRL*QLIREG
Trigger: ACCCTCTCGGATCAGCTGCCACAGCCTGAGGAGCGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCGCTCCTCAGGCTGTaGCAGCTGATCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPALLRL*QLIREG
Trigger: ACCCTCTCGGATCAGCTGCCACAGCCTGAGGAGCGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGCCGCTGTCCAGAATaGAGCCCAGGGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCRCPE*SPGVLR
Trigger: GCGCAGCACCCCTGGGCTCCATTCTGGACAGCGGCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCACACTCCGTTTCATTaGCACAGGCATCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHTPFH*HRHQSH
Trigger: ATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCATCCTGCTGTCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTTTGCAGCCTGGATCTCCCTaGGGTCTTCTATGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: ASCCLSPPPPLPLPLQTLQPGSP*GLLCPS
Trigger: AGACGGACATAGAAGACCCCAGGGAGATCCAGGCTG...CAAAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGACAGCAGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp TTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTACAGTGCGCTGTAGAATaGGCCCTCCTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LQRLLGAVLLSPPHQSWLQCAVE*ALLVVF
Trigger: GAAGACGACGAGGAGGGCCCATTCTACAGCGCACTG...TAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGAACATGCCACGGGTaGCCCTCAGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGTCHG*PSEMDL
Trigger: TAAATCCATTTCTGAGGGCCACCCGTGGCATGTTCC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCGTGCTGGCATCTGTaGGGACTGGTGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPACWHL*GLVPQS
Trigger: GGACTGAGGCACCAGTCCCCACAGATGCCAGCACGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCGTGCTGGCATCTGTaGGGACTGGTGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGACWHL*GLVPQS
Trigger: GGACTGAGGCACCAGTCCCCACAGATGCCAGCACGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAVPLK*PAAHLP
Trigger: AGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGCAGATATTCCTTGTaGCTCACATTGACGGAGACC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGRYSL*LTLTET
Trigger: GGTCTCCGTCAATGTGAGCCACAAGGAATATCTGCC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATATTTTGGAGTTCTGTaGCTTCGGGGCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQYFGVL*LRGSGL
Trigger: CAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCGGGGCTGTCGAGGTaGGGCATCCTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPGLSR*GILLSV
Trigger: GACAGACAGCAGGATGCCCCACCTCGACAGCCCCGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGGGAGGTGGCCCGTTaGTGTACCGCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLWEVAR*CTAAWG
Trigger: ACCCCATGCTGCGGTACACCAACGGGCCACCTCCCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGGAGGTGGCCCGTTaGTGTACCGCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWEVAR*CTAAWG
Trigger: ACCCCATGCTGCGGTACACCAACGGGCCACCTCCCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp TCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTTaGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPPPPLPLPLQT*QRLLGAVLLSP
Trigger: TGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGACATGCCCCTTCTTaGTGTCTGCGAATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGHAPS*CLRISQ
Trigger: CTGACTTATTCGCAGACATCAAGAAGGGGCATGTCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTAGGTCTCACTTGCTaGGTCCTTCAGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVGLTC*VLQHLL
Trigger: CAGAAGATGCTGAAGGACTCAGCAAGTGAGACCTAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACATCCTCCCTTTCAGTaGCAGGACATCAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHPPFQ*QDINEG
Trigger: TCCTTCATTGATGTCCTGTCACTGAAAGGGAGGATG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACATCGCCTTTTCAGTTaGCAGCTGGTTGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHRLFS*QLVVWY
Trigger: ATACCAGACAACCAGCTGTCAACTGAAAAGGCGATG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTCCATGGAATATGTaGGTTGGGTTGTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAPWNM*VGLSSW
Trigger: CCATGAGGACAACCCAACTCACATATTCCATGGAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTTGTTCGCCACCTCTaGAGATGGATCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVVRHL*RWISLL
Trigger: GAGCAAAGAGATCCATCTTCAGAGGTGGCGAACAAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTTCCTGAAGCCTGCTaGTTTGTCCGTCTACGAATT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFPEAC*FVRLRI
Trigger: AATTCGTAGACGGACAAATCAGCAGGCTTCAGGAAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGACACGATCCACGAATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKTRSTN*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATTCGTGGATCGTGT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCTTGCTGCTGGCCTTaGTCAGCTGGTCGCCCATCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPCCWP*SAGRPS
Trigger: AGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCTTGCTGCTGGCCTTaGTCAGCTGGTCGCCCATCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPCCWP*SAGRPS
Trigger: AGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCTTGCTGCTGGCCTTaGTCAGCTGGTCGCCCATCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPCCWP*SAGRPS
Trigger: AGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGTGGTCTGCTGGATTaGGTCACACTCCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGGLLD*VTLRFI
Trigger: AATGAAACGGAGTGTGACTCAATCCAGCAGACCACC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCATGCGTCGCTCCATTaGCATGGCACAAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDHASLH*HGTNVP
Trigger: AGGAACATTTGTGCCATGTCAATGGAGCGACGCATG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLSVTL*EVFYVG
Trigger: ACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCCGGAGGCACAAGGTaGCACAGTGACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLAGGTR*HSDWGD
Trigger: ATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCCGGAGGCACAAGGTaGCACAGTGACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPAGGTR*HSDWGD
Trigger: ATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCCGGAGGCACAAGGTaGCACAGTGACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAGGTR*HSDWGD
Trigger: ATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGCCTGAGCTTGCTGTaGAGCTCCTGCGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSLSLL*SSCAWI
Trigger: GATCCAGGCGCAGGAGCTTCACAGCAAGCTCAGGCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGCCCTGATCACCCTTaGGAGGAAGGAGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCPDHP*EEGASR
Trigger: CCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCGTCTTCTACTTCCTaGTTTTCCGCAGCCTTTACA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSSSTS*FSAAFT
Trigger: TGTAAAGGCTGCGGAAAAGCAGGAAGTAGAAGACGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCCCAGATTGTCACCTaGTTGATGAGTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSQIVT*LMSPST
Trigger: AGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACACTTAGAGAGGCGCTaGAATCCTTTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHLERR*NPFLPS
Trigger: AGAAGGAAGGAAAGGATTGCAGCGCCTCTCTAAGTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCTGGACAGCCACTGTaGAGAGGGGCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPGQPL*RGAGQR
Trigger: CCTCTGACCTGCCCCTCTGCACAGTGGCTGTCCAGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGCTGCTCTCAGAGATaGCAAAAACCCTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSCSQR*QKPFQS
Trigger: GCTCTGGAAGGGTTTTTGGCATCTCTGAGAGCAGCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGTCACCCTCACATGGTaGAAGGCTGGGGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGVTLTW*KAGGDA
Trigger: GGCATCACCCCCAGCCTTGCACCATGTGAGGGTGAC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTCACCCTCACATGGTaGAAGGCTGGGGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVTLTW*KAGGDA
Trigger: GGCATCACCCCCAGCCTTGCACCATGTGAGGGTGAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCGCTCTCCGTGTCTTaGAGCTGCTGCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGALSVS*SCCWDA
Trigger: GGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTCCACCATGCAGGATaGACTCAGCCTCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVHHAG*TQPLSE
Trigger: TTCAGAAAGAGGCTGAGTGCATCCTGCATGGTGGAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGGGCCAGCAGCAGCTaGTGCTTCTCCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRASSS*CFSTLS
Trigger: GGAGAGTGTGGAGAAGCAGCAGCTGCTGCTGGCCCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTTCCGTGCACTCGCTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTTCCGTGCACTCGCTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAATAAGACCGCAGGCTTaGTGTGCTCCATGGAATATG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQIRPQA*CAPWNM
Trigger: CATATTCCATGGAGCACAGCAAGCCTGCGGTCTTAT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACATTTCTCTTCGATTATaGCAGCCATGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDISLRL*QPWRGR
Trigger: CCTGCCCCTCCATGGCTGGCATAATCGAAGAGAAAT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTGCTGCAGCCAGGCTaGCGCTTCTGCGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLLQPG*RFCVSI
Trigger: AATGCTCACGCAGAAGCGGCAGCCTGGCTGCAGCAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTGCTGCAGCCAGGCTaGCGCTTCTGCGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLLQPG*RFCVSI
Trigger: AATGCTCACGCAGAAGCGGCAGCCTGGCTGCAGCAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGAGCCCAGGGGTGCTaGGCTCCTCAGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGAQGC*APQAVA
Trigger: TGCCACAGCCTGAGGAGCGCAGCACCCCTGGGCTCC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAATGGAGCCCAGGGGTaGTGCGCTCCTCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGNGAQG*CAPQAV
Trigger: CACAGCCTGAGGAGCGCAGCACCCCTGGGCTCCATT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCTGTCTGGAGGGAGTaGCGCTGTCCAGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLAVWRE*RCPEWS
Trigger: GCTCCATTCTGGACAGCGGCACTCCCTCCAGACAGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGAAGATGGATCTCTTTaGTCTTCAGCTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQEDGSL*SSARGP
Trigger: TGGTCCACGAGCTGAAGAGCAAAGAGATCCATCTTC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGTGCCTTCAGAGCCTaGAGCCTCTTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDCAFRA*SLFFSF
Trigger: GAAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGCAAAAGCTGGATCTaGTCCTTCAGAACCGTCACG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDCKSWI*SFRTVT
Trigger: CGTGACGGTTCTGAAGGAGCAGATCCAGCTTTTGCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCCTCCCATTGTCTGTaGAAAAGCTGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSSHCL*KSWICS
Trigger: GGAGCAGATCCAGCTTTTGCACAGACAATGGGAGGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGCTGGTCGCCCATCTaGTTCAGCTGCAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSWSPI*FSCSLF
Trigger: AAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRAQTQ*EPTRYE
Trigger: TTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGTTCGATATCTCGCTaGAGATCCTGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDCSISR*RSCCSA
Trigger: TGCTGAGCAGCAGGATCTGCAGCGAGATATCGAACA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPAVTRF*RLSQRW
Trigger: CCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAVTRF*RLSQRW
Trigger: CCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCTGTGACCCGCTTCTaGAGATTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPAVTRF*RLSQRW
Trigger: CCAGCGCTGGGACAATCTGCAGAAGCGGGTCACAGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCTACGTTGGTCAGCTaGAGGTCCATTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSTLVS*RSISVS
Trigger: GCTCACAGAAATGGACCTGCAGCTGACCAACGTAGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGGCTGTCAGGAACATaGCACGGGTGGCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGLSGT*HGWPSE
Trigger: TTCTGAGGGCCACCCGTGGCATGTTCCTGACAGCCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTTTGCTGTCATCGGTaGCTTGACGTAATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLCCHR*LDVIAA
Trigger: AGCTGCTATTACGTCAAGGCACCGATGACAGCAAAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACATGCGCCTTCTGCCTaGGGCTCTCTGCTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHAPSA*GSLLSL
Trigger: TAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACATGCGCCTTCTGCCTaGGGCTCTCTGCTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHAPSA*GSLLSL
Trigger: TAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACGAGGTGGGGCATCCTaGTGTCTGTCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRGGAS*CLSPPP
Trigger: AGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCGAGGTGGGGCATCCTaGTGTCTGTCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRGGAS*CLSPPP
Trigger: AGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGAAGATAGTTTCCCTTaGATCAGAGTCCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKEDSFP*IRVLAS
Trigger: TGAAGCCAGGACTCTGATCCAAGGGAAACTATCTTC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTCATCTCTACCTTCTaGTTCATGGTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLISTF*FMVSSW
Trigger: CCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCCTTCACGTGTGCTTTaGGTAAGAGCATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKPSRVL*VRASSH
Trigger: ATGTGAAGATGCTCTTACCCAAAGCACACGTGAAGG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCTTGCTCTTCTGTTTaGTTGAGATGCTGCGACTGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQACSSV*LRCCDC
Trigger: ACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCTTCGGGAATGTTCTaGATACTCCTGACACGCTGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPSGMF*ILLTRC
Trigger: ACAGCGTGTCAGGAGTATCCAGAACATTCCCGAAGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGCTTGGTTCCCGTCTaGGGCAGCCTCAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGLVPV*GSLSST
Trigger: AGTGGAACTGAGGCTGCCCCAGACGGGAACCAAGCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTCCTCCTTGACCACTaGCAGGAAAGACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLLLDH*QERHGV
Trigger: AACTCCATGTCTTTCCTGCCAGTGGTCAAGGAGGAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCTCTTCAAGTTGGGTaGTGTAAGCTTGCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQALQVG*CKLAVR
Trigger: ACGAACTGCAAGCTTACACCACCCAACTTGAAGAGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCAAGAGCCAGTTTCTaGAAGAACACCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSRASF*KNTCWA
Trigger: TGCCCAGCAGGTGTTCTTCCAGAAACTGGCTCTTGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACGCGATCTGGCCCTCTaGCTCAGGACAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRDLAL*LRTAHR
Trigger: TCTGTGAGCTGTCCTGAGCCAGAGGGCCAGATCGCG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCGCGATCTGGCCCTCTaGCTCAGGACAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRDLAL*LRTAHR
Trigger: TCTGTGAGCTGTCCTGAGCCAGAGGGCCAGATCGCG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTGCCTCTTTCAGGTaGAGAAGTTGGTTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSASFR*RSWFPV
Trigger: TACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGGTTGTCCTCATGGTaGCCTCATCATAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGLSSW*PHHRAC
Trigger: ACAAGCTCTATGATGAGGCCACCATGAGGACAACCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTGTTGGCAAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVLASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGAATTCTCTCGTTTCTaGGCTGGGTGTGTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDEFSRF*AGCVPQ
Trigger: TTGCGGAACACACCCAGCCCAGAAACGAGAGAATTC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRRQQA*RAQTQC
Trigger: GCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCAGCAAGCCTCTTCTaGATCTCCTGGTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSASLF*ISWLSQ
Trigger: CTGCGATAACCAGGAGATCCAGAAGAGGCTTGCTGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTTTGCAAAGGCTGCTTGTCCAGGCTCCTGGTaGTCTGCTGGATTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SVSSSSSSSSTPNFAKAACPGSW*SAGLSH
Trigger: GTGACTCAATCCAGCAGACCACCAGGAGCCTGGACA...AGCAGCCTTTGCAAAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSKPGV*EVRRRW
Trigger: CCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTGACTGGGGAGATGTaGGCTCCTCGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVTGEM*APRSLS
Trigger: GGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTGACTGGGGAGATGTaGGCTCCTCGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVTGEM*APRSLS
Trigger: GGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGAACATGCCACGGGTaGCCCTCAGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGTCHG*PSEMDL
Trigger: TAAATCCATTTCTGAGGGCCACCCGTGGCATGTTCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVCSDA*NGKGCQ
Trigger: CTGACAGCCCTTCCCATTCCAAGCATCACTACAAAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGCAGATATTCCTTGTaGCTCACATTGACGGAGACC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGRYSL*LTLTET
Trigger: GGTCTCCGTCAATGTGAGCCACAAGGAATATCTGCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCACTCCAGGAGGACCTaGCGGTCGGCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSHSRRT*RSASGL
Trigger: CAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACCACCTCATCAAAGCTaGTTAGAGAAGCATCCGGAT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQPPHQS*LEKHPD
Trigger: ATCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp GATTCTCTGTTCCAGCAGAAGGACATCTTGTCTGAGTaGTCCTGGGCTCCCAGAGTCCACTTGGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: DSLFQQKDILSE*SWAPRVHLDKR
Trigger: CCTCTTGTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTGGAACAGAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp GCTGTGCTTGATTCTCTGTTCCAGCAGAAGGACATCTaGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: AVLDSLFQQKDI*SELSWAPRVHL
Trigger: CAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTGGAACAGAGAATCAAGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp GTGATCTCCTGTTGGAAGCCGTTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCTGAGAAGTGTTCTACG +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRI*SSASLSEKCST
Trigger: CGTAGAACACTTCTCAGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCAACAGGAGATCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CAA 72 bp CTGGTCGATCTTGTTGGTGTTCAGTGTGATCTCCTGTaGGAAGCCGTTCAGTTGGCGCATCTTGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LVDLVGVQCDLL*EAVQLAHLVLS
Trigger: GCTGAGGACAAGATGCGCCAACTGAACGGCTTCCAACAGGAGATCACACTGAACACCAACAAGATCGACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CAA 72 bp AGCTGCTCCCCAAACACGATGAGCTGGTCGATCTTGTaGGTGTTCAGTGTGATCTCCTGTTGGAAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SCSPNTMSWSIL*VFSVISCWKPF
Trigger: GAACGGCTTCCAACAGGAGATCACACTGAACACCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
3UTR CAA 72 bp ATGAGCTGCTCCCCAAACACGATGAGCTGGTCGATCTaGTTGGTGTTCAGTGTGATCTCCTGTTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: MSCSPNTMSWSI*LVFSVISCWKP
Trigger: CGGCTTCCAACAGGAGATCACACTGAACACCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGCAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTCTTCAATTCTTGTTaGTCCTCTGGTGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLFNSC*SSGDVS
Trigger: GCTGACATCACCAGAGGATCAACAAGAATTGAAGAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCATCGCCTTTTCAGTTaGCAGCTGGTTGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDHRLFS*QLVVWY
Trigger: ATACCAGACAACCAGCTGTCAACTGAAAAGGCGATG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTTCAAGGCTCTCTGTaGCAGAAGCTTTCGTACTCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVQGSL*QKLSYS
Trigger: AGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAATGCCCTCTTCCTTCTaGATCAAAGCTGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQMPSSF*IKAVKL
Trigger: CAACTTGACAGCTTTGATTCAGAAGGAAGAGGGCAT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGATGTGTGGATTCTTTaGTTGTCTCTTCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDDVWIL*LSLLPR
Trigger: CCGAGGGAGAAGAGACAATCAAAGAATCCACACATC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCAAAGCCTCTTCATGTaGAGCTCAGCTTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDQSLFM*SSACHF
Trigger: AAAGTGGCAAGCTGAGCTTCACATGAAGAGGCTTTG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCGCCATCGTGTTCTTaGCCCAGGACAGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPPSCS*PRTESP
Trigger: AGGAGACTCTGTCCTGGGTCAAGAACACGATGGCGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGTCTTCTAGATCCGTaGAAATTGAATGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGLLDP*KLNVEG
Trigger: GCCTTCTACATTCAATTTTCACGGATCTAGAAGACC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGCTGGCTTGTCCTCTaGAACACAGGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSWLVL*NTGRGL
Trigger: CAAGCCCCTGCCTGTGTTTCAGAGGACAAGCCAGCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGTCTATGTTGCTTCTaGTTGTATTCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCLCCF*LYSGPG
Trigger: CCCAGGACCTGAATACAATCAGAAGCAACATAGACA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACGTTCAATGTCAGGTaGCTGGGCTGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTFNVR*LGCQGQ
Trigger: CTGGCCCTGACAGCCCAGTCACCTGACATTGAACGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCGGCCTTCATAGTCTaGAGTTCTTTCAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSAFIV*SSFKLC
Trigger: GCACAGCTTGAAAGAACTTCAGACTATGAAGGCCGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGTGTTGGTGTTCAGTGTaGTCTCCTGTTGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LGAVLLSPPHQSWLEKHPCWCSV*SPVGSR
Trigger: ACGGCTTCCAACAGGAGATCACACTGAACACCAACA...CGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACACAAGGTGACACAGTaGCTGGGGAGATGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLHKVTQ*LGRCGL
Trigger: GAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACAAGGTGACACAGTaGCTGGGGAGATGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHKVTQ*LGRCGL
Trigger: GAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCCGGAGGCACAAGGTaGCACAGTGACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGAGGTR*HSDWGD
Trigger: ATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCCACGTCACCTGTGTaGTCCCACTCCAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPTSPV*SHSRGI
Trigger: TATCCCTCTGGAGTGGGATCACACAGGTGACGTGGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCCACGTCACCTGTGTaGTCCCACTCCAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPTSPV*SHSRGI
Trigger: TATCCCTCTGGAGTGGGATCACACAGGTGACGTGGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGCCCTGATCACCCTTaGGAGGAAGGAGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCPDHP*EEGASR
Trigger: CCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCTCCTGCTCAGCTTaGAGTGAAAAGTGTAGATCA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSSCSA*SEKCRS
Trigger: TGATCTACACTTTTCACTGCAAGCTGAGCAGGAGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCGCTGCTCCTCTCCTaGTCACTGGCAAAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPALLLS*SLAKSD
Trigger: GTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTGCCAGTTTACTCTaGAGGCAGGCGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSASLL*RQALLL
Trigger: GAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTGCCAGTTTACTCTaGAGGCAGGCGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSASLL*RQALLL
Trigger: GAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAAGTGGTTTCTCATTaGTCTGAAGCAACGACTGTA +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQVVSH*SEATTV
Trigger: TACAGTCGTTGCTTCAGAGCAATGAGAAACCACTTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTGTTTGGTTGAGATaGTGCGACTGTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSVWLR*CDCSRS
Trigger: ACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAAAGTACAACGAAGTTaGTCTTTGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDKVQRS*SLASGL
Trigger: CAGCCCTGAGGCCAAAGAGCAACTTCGTTGTACTTT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLATLAC*SHSSSL
Trigger: CAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCAGGCCCTGGTCTTTaGACGTCTCTAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPGPGL*TSLAER
Trigger: CCTCTCTGCTAGAGACGTGCAAAGACCAGGGCCTGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCAGGCCCTGGTCTTTaGACGTCTCTAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPGPGL*TSLAER
Trigger: CCTCTCTGCTAGAGACGTGCAAAGACCAGGGCCTGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGTAACCCAGGTCTCTaGAGCAGCCCCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSNPGL*SSPSTL
Trigger: CAGTGTGGAGGGGCTGCTGCAGAGACCTGGGTTACT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGTAACCCAGGTCTCTaGAGCAGCCCCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSNPGL*SSPSTL
Trigger: CAGTGTGGAGGGGCTGCTGCAGAGACCTGGGTTACT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACAGGCAGCTCTGCTCTaGACACTCTCCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLQAALL*TLSRLT
Trigger: AGTCAGCCTGGAGAGTGTGCAGAGCAGAGCTGCCTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACAGGCAGCTCTGCTCTaGACACTCTCCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPQAALL*TLSRLT
Trigger: AGTCAGCCTGGAGAGTGTGCAGAGCAGAGCTGCCTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCCGGCCTTCAGGGATaGGTCCCTCCAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAGLQG*VPPGSS
Trigger: AGAGCTGCCTGGAGGGACGCATCCCTGAAGGCCGGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTTCATTCTGGTAGCTaGGGCTGTGCTCAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLHSGS*GCAQGR
Trigger: CCGGCCTTGAGCACAGCCGCAGCTACCAGAATGAAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCTTGTAACTGGGCCTaGAAAGCAGCTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSCNWA*KAALLL
Trigger: CAAGAGCAAAGCTGCTTTGCAGGCCCAGTTACAAGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGGCAAAGCCGGGCATaGTTCCCATCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDWQSRA*FPSMFL
Trigger: AAGAAACATTGATGGGAAGCATGCCCGGCTTTGCCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGAACTTTGCTTCCTaGTGCTGCAGCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWNFAS*CCSQAA
Trigger: GGCAGCCTGGCTGCAGCAGCAGGAAGCAAAGTTCCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCCTCTTTGGTCTTCTaGAGGTCACTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPASLVF*RSLCSP
Trigger: GGGGCTGCAGAGTGACCTGCAGAAGACCAAAGAGGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCCTCTTTGGTCTTCTaGAGGTCACTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLASLVF*RSLCSP
Trigger: GGGGCTGCAGAGTGACCTGCAGAAGACCAAAGAGGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGAAGATGGATCTCTTTaGTCTTCAGCTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDEDGSL*SSARGP
Trigger: TGGTCCACGAGCTGAAGAGCAAAGAGATCCATCTTC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGCTTCCAAGGCCAGTaGGTACGTTGTTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGFQGQ*VRCSPP
Trigger: AGGTGGCGAACAACGTACGCACTGGCCTTGGAAGCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGCTTCCAAGGCCAGTaGGTACGTTGTTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGFQGQ*VRCSPP
Trigger: AGGTGGCGAACAACGTACGCACTGGCCTTGGAAGCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGCTTCCAAGGCCAGTaGGTACGTTGTTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGFQGQ*VRCSPP
Trigger: AGGTGGCGAACAACGTACGCACTGGCCTTGGAAGCC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGTGTTCAGTGTGATCTCCTGTTGGAAGCCGTTCAGTTGGCGCATCTTGTCCTCAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAA +
Preference number: 4 (lower is better)
Translates to: GVQCDLLLEAVQLAHLVLRAQTQ*EPTRYE
Trigger: TTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCT...GAGGACAAGATGCGCCAACTGAACGGCTTCCAACAGGAGATCACACTGAACACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACGCTGCAGATCCTGCTaGTCAGCAAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRCRSC*SASLFW
Trigger: CCAGAAGAGGCTTGCTGAGCAGCAGGATCTGCAGCG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACGCTGCAGATCCTGCTaGTCAGCAAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRCRSC*SASLFW
Trigger: CCAGAAGAGGCTTGCTGAGCAGCAGGATCTGCAGCG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGATGTTCGATATCTCGCTaGAGATCCTGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSCSPESTSSKLVREASGCSISR*RSCCSA
Trigger: TGCTGAGCAGCAGGATCTGCAGCGAGATATCGAACA...TCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CTTCCACTCCAAACTTTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCACAGACTCCACCCCTaGACTGTGTTGTTCGATATC +
Preference number: 4 (lower is better)
Translates to: LPLQTLQRLLGAVLLSPPHRLHP*TVLFDI
Trigger: GATATCGAACAACACAGTGCAGGGGTGGAGTCTGTG...AGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCATCTGCTTCAGCTTaGTGGCTGTGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPSASA*WLCRCG
Trigger: ACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCATCTGCTTCAGCTTaGTGGCTGTGTCGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPSASA*WLCRCG
Trigger: ACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRWLPS*TICFSL
Trigger: CAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRWLPS*TICFSL
Trigger: CAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRWLPS*TICFSL
Trigger: CAAGCTGAAGCAGATGGTGCACGAGGGCAACCAGCG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCTTTAAGCCTTCTTTaGTGTCATCGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPLSLL*CHRCLD
Trigger: GTCAAGGCACCGATGACAGCAAAGAAGGCTTAAAGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCATGCGCCTTCTGCCTaGGGCTCTCTGCTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGHAPSA*GSLLSL
Trigger: TAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGACTTGCTCTTGCAGTTaGTTGAGTTTCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKTCSCS*LSFFSI
Trigger: GATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGGCCTTGGACTCTTTaGAAAGGCTGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGPWTL*KGCWEL
Trigger: CAGCTCCCAGCAGCCTTTGCAAAGAGTCCAAGGCCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCGAGGTGGGGCATCCTaGTGTCTGTCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGRGGAS*CLSPPP
Trigger: AGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTGGTTCCAGCAATTTaGGGATCTTCAGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLVPAI*GSSAHV
Trigger: AACATGAGCTGAAGATCCCCAAATTGCTGGAACCAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACACATGGTGTTCTAGCTaGCACTTGATGCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDTWCSS*HLMLSG
Trigger: TCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTGCATTCTTCCACCTaGGATCCGATCTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLHSST*DPISAG
Trigger: CCCTGCGGAGATCGGATCCCAGGTGGAAGAATGCAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTCTTGCGCCTGTCCTaGGTCCTGCTCGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFLRLS*VLLDEV
Trigger: GACTTCGTCGAGCAGGACCCAGGACAGGCGCAAGAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACACCTGCTGGACGTGTaGGAGGGCCTCCATTATCTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLHLLDV*EGLHYL
Trigger: CAGATAATGGAGGCCCTCCCACACGTCCAGCAGGTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCCACAGCTCCAGCTTaGCCACTTGGGTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPATAPA*PLGSCR
Trigger: TCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACAGTCTCCCAGGCCCTaGTCTTTGCACGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGQSPRP*SLHVSS
Trigger: GCTAGAGACGTGCAAAGACCAGGGCCTGGGAGACTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGTCTCCCAGGCCCTaGTCTTTGCACGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQSPRP*SLHVSS
Trigger: GCTAGAGACGTGCAAAGACCAGGGCCTGGGAGACTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCTGCCTCTTTCAGGTaGAGAAGTTGGTTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSASFR*RSWFPV
Trigger: TACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAGACAGATTGGTGTTaGCAAGCTGTTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQTDWC*QAVGTL
Trigger: CAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTCCTTCAGGGCCCGTaGCAGGATATCTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVLQGP*QDICQV
Trigger: AACCTGGCAGATATCCTGCCACGGGCCCTGAAGGAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTCCTTCAGGGCCCGTaGCAGGATATCTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVLQGP*QDICQV
Trigger: AACCTGGCAGATATCCTGCCACGGGCCCTGAAGGAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCCGCTGTCCAGAATaGAGCCCAGGGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCRCPE*SPGVLR
Trigger: GCGCAGCACCCCTGGGCTCCATTCTGGACAGCGGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCAATGTCAGGTGACTaGGCTGTCAGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSMSGD*AVRAST
Trigger: CGTGCTGGCCCTGACAGCCCAGTCACCTGACATTGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTGGCCTTGATCAGCTaGTCGCCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLALIS*SPICFS
Trigger: GCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCCTGTCCAGGCTCCTaGTGGTCTGCTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPACPGS*WSAGLS
Trigger: ACTCAATCCAGCAGACCACCAGGAGCCTGGACAGGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCCTGTCCAGGCTCCTaGTGGTCTGCTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPACPGS*WSAGLS
Trigger: ACTCAATCCAGCAGACCACCAGGAGCCTGGACAGGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCCTGTCCAGGCTCCTaGTGGTCTGCTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGACPGS*WSAGLS
Trigger: ACTCAATCCAGCAGACCACCAGGAGCCTGGACAGGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AGCAGCTGCAACGGTAGCGCTGCCCTGATCACCCTTGAGAGGAAGGAGCGTCTCGTTTCAGCTCCTCTTTaGCATTTGTATACAACACCT +
Preference number: 4 (lower is better)
Translates to: SSCNGSAALITLERKERLVSAPL*HLYTTP
Trigger: AGGTGTTGTATACAAATGCCAAAGAGGAGCTGAAAC...GAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCAGCGCTACCGTTGCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRLSQR*LPSCTI
Trigger: GATGGTGCACGAGGGCAACCAGCGCTGGGACAATCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRLSQR*LPSCTI
Trigger: GATGGTGCACGAGGGCAACCAGCGCTGGGACAATCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRLSQR*LPSCTI
Trigger: GATGGTGCACGAGGGCAACCAGCGCTGGGACAATCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCAAACTCTTCCCTCTaGTTGGTGAAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSNSSL*LVKYLS
Trigger: ACTCAGGTACTTCACCAACCAGAGGGAAGAGTTTGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGAAGTGTTCTACGTTaGTCAGCTGCAGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRSVLR*SAAGPF
Trigger: AAATGGACCTGCAGCTGACCAACGTAGAACACTTCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCGCCAAGAGTCAGCCTaGATCTCCCTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRQESA*ISLGSS
Trigger: AGAAGACCCCAGGGAGATCCAGGCTGACTCTTGGCG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACAGTGCGCTGTAGAATaGGCCCTCCTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPQCAVE*ALLVVF
Trigger: GAAGACGACGAGGAGGGCCCATTCTACAGCGCACTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACAGTGCGCTGTAGAATaGGCCCTCCTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLQCAVE*ALLVVF
Trigger: GAAGACGACGAGGAGGGCCCATTCTACAGCGCACTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp AACTTTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGTTCGGGGCTCTGGCTTaGCAGATATTCCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NFAKAAGSCSPESTSSKLFGALA*QIFLVA
Trigger: AGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAA...CAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATATTGTCTGCACGAGTaGACATTCTTTTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQYCLHE*TFFSSI
Trigger: GATGCTGGAAAAGAATGTTCACTCGTGCAGACAATA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAATCATTTCCACAGCTaGGTTCGTGTTTGTTTCCCG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDNHFHS*VRVCFP
Trigger: CGGGAAACAAACACGAACTCAGCTGTGGAAATGATT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCAGCTTGCACTTTCTaGTCTGAGAAAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSACTF*SEKGCC
Trigger: ACAACATCCTTTCTCAGATCAGAAAGTGCAAGCTGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTCAGCTTGCCTTTCTaGAGAATGCTCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLSLPF*RMLRSS
Trigger: GGAGCTGCGGAGCATTCTTCAGAAAGGCAAGCTGAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTGGCTAAGGGTCCTTaGAGAGTCATAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVAKGP*RVIAGR
Trigger: CCTGCCTGCTATGACTCTTCAAGGACCCTTAGCCAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAGCTGGCTTGTCCTCTaGAACACAGGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSWLVL*NTGRGL
Trigger: CAAGCCCCTGCCTGTGTTTCAGAGGACAAGCCAGCT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGATGTTAGTTCATGGTaGAGATACTGCCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQDVSSW*RYCHLS
Trigger: TGACAAGTGGCAGTATCTTCACCATGAACTAACATC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGCACATCTGCTTTCTaGAGCTGTTTGCTAATACTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCTSAF*SCLLIL
Trigger: GAGTATTAGCAAACAGCTTCAGAAAGCAGATGTGCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGGGCAGCGAAGAGATaGGAGCTTCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRAAKR*ELPGPS
Trigger: AGAAGGACCTGGAAGCTCTCATCTCTTCGCTGCCCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGGGCAGCGAAGAGATaGGAGCTTCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRAAKR*ELPGPS
Trigger: AGAAGGACCTGGAAGCTCTCATCTCTTCGCTGCCCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTTCCTGAAGCCTGCTaGTTTGTCCGTCTACGAATT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDFPEAC*FVRLRI
Trigger: AATTCGTAGACGGACAAATCAGCAGGCTTCAGGAAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGTCTAACTGCTGAATaGAAGCAAACGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCLTAE*KQTSPS
Trigger: TGAAGGAGACGTTTGCTTTCATTCAGCAGTTAGACA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTTTGCAAAGGCTGCTGGTGGTCTGCTGGATTaGGTCACACTCCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: SVSSSSSSSSTPNFAKAAGGLLD*VTLRFI
Trigger: AATGAAACGGAGTGTGACTCAATCCAGCAGACCACC...AGCAGCCTTTGCAAAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCTCCCCAAACACGATaGGCTGGTCGATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAPQTR*AGRSCW
Trigger: CCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCACAAGGTGACACAGTaGCTGGGGAGATGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGHKVTQ*LGRCGL
Trigger: GAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCCACGTCACCTGTGTaGTCCCACTCCAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPTSPV*SHSRGI
Trigger: TATCCCTCTGGAGTGGGATCACACAGGTGACGTGGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGTCCTGGCACTGCATaGGTGACTGCCGTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSPGTA*VTAVSL
Trigger: GAGACTTACGGCAGTCACTCATGCAGTGCCAGGACT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGTCCTGGCACTGCATaGGTGACTGCCGTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSPGTA*VTAVSL
Trigger: GAGACTTACGGCAGTCACTCATGCAGTGCCAGGACT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTACCTCCAGCTCCTTCTaGGCTTCCTCCACCTTTAGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPTSSSF*ASSTFS
Trigger: GCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACCTCCAGCTCCTTCTaGGCTTCCTCCACCTTTAGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTSSSF*ASSTFS
Trigger: GCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCGTAATCTCGGAGTaGTCTCTTCAATTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFVISE*SLQFLL
Trigger: CAACAAGAATTGAAGAGAGCACTCCGAGATTACGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCTGCAGGCAGGCGCTaGTCCTCTCCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSAGRR*SSPAHW
Trigger: CCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGGACGGTCTCTACCTaGTGTATTTTACTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRTVST*CILLFP
Trigger: AGGAAACAGTAAAATACAGCAGGTAGAGACCGTCCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGGCTCTCATGCAGGTaGTTCACTTCTAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRLSCR*FTSSHG
Trigger: GCCGTGGCTAGAAGTGAAGCACCTGCATGAGAGCCT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCTCCTGCTGTAGACTaGCCAAGTGGCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPAPAVD*PSGTLK
Trigger: CTTCAGTGTGCCACTTGGGCAGTCTACAGCAGGAGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACTCGGTGCGAAGCTTaGTCAGTGAGCCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTRCEA*SVSLAG
Trigger: ACCAGCAAGGCTCACTGAGCAAGCTTCGCACCGAGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTGAATCAAAGTTTGTaGATTGAGCAGAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLNQSL*IEQSAF
Trigger: GAAAGCACTCTGCTCAATGCACAAACTTTGATTCAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCCACACTCTCCTGGTaGTGGCACAGAGAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSTLSW*WHRESN
Trigger: GTTGGACTCTCTGTGCCAGCACCAGGAGAGTGTGGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCTCTAGGGCACTCCTaGATTCTTCCACCTGGGATC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPLGHS*ILPPGI
Trigger: GATCCCAGGTGGAAGAATGCAGGAGTGCCCTAGAGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTGCCAATGACCTCCTaGAGTTTCTCCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLPMTS*SFSQLR
Trigger: ACGGAGCTGGGAGAAACTGCAGGAGGTCATTGGCAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTGCCAATGACCTCCTaGAGTTTCTCCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLPMTS*SFSQLR
Trigger: ACGGAGCTGGGAGAAACTGCAGGAGGTCATTGGCAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGGAACTTTGCTTCCTaGTGCTGCAGCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGWNFAS*CCSQAA
Trigger: GGCAGCCTGGCTGCAGCAGCAGGAAGCAAAGTTCCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAATGGAGCCCAGGGGTaGTGCGCTCCTCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSNGAQG*CAPQAV
Trigger: CACAGCCTGAGGAGCGCAGCACCCCTGGGCTCCATT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAA +
Preference number: 4 (lower is better)
Translates to: LQRLLGAVLLSPPHQSWLRAQTQ*EPTRYE
Trigger: TTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCT...TAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACTGCATGAGTGACTaGCGTAAGTCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHCMSD*RKSPRQ
Trigger: CTGGCGAGGAGACTTACGGCAGTCACTCATGCAGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCACTGCATGAGTGACTaGCGTAAGTCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPHCMSD*RKSPRQ
Trigger: CTGGCGAGGAGACTTACGGCAGTCACTCATGCAGTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACTTGCTCTTGCAGTTaGTTGAGTTTCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTCSCS*LSFFSI
Trigger: GATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp AACAGGCTGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTGGGATTTACCAGAAGATaGTTGCAAAGATTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NRLSAMALQLVEPSRWEVGFTRR*LQRFCG
Trigger: ACCACAAAATCTTTGCAAGCATCTTCTGGTAAATCC...CACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CCAAACACGATGAGCTGGTCGATCTTGTTGGTGTTCAGTGTGATCTCCTGTTGGAGGTCTCCTCGATTCTaGTGCTCAGCAAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PNTMSWSILLVFSVISCWRSPRF*CSASLF
Trigger: GAAGAGGCTTGCTGAGCAGCAGAATCGAGGAGACCT...CCAACAGGAGATCACACTGAACACCAACAAGATCGACCAGCTCATCGTGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGACATCTACATCTTCTaGTTCCAGCAATTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQDIYIF*FQQFGD
Trigger: ATCCCCAAATTGCTGGAACCAGAAGATGTAGATGTC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTACCTTGGCCTGTGTaGAATCCCCGGGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLPWPV*NPRGQA
Trigger: CGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGACCTGCAGTTCAAGTaGTTTCTCATTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDDLQFK*FLIALK
Trigger: CTTCAGAGCAATGAGAAACCACTTGAACTGCAGGTC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAATCTGGGTCTTGGCCTaGTCCAGATCCTCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLIWVLA*SRSSLS
Trigger: GCTGAGAGAGGATCTGGACCAGGCCAAGACCCAGAT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAATCTGGGTCTTGGCCTaGTCCAGATCCTCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPIWVLA*SRSSLS
Trigger: GCTGAGAGAGGATCTGGACCAGGCCAAGACCCAGAT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCAGTCATCCCCATCTaGGTCTTGGCCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSVIPI*VLAWSR
Trigger: TCTGGACCAGGCCAAGACCCAGATGGGGATGACTGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTCCTAGTCAATGCTTaGGAAAACAGATCCATTCGC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFLVNA*ENRSIR
Trigger: GCGAATGGATCTGTTTTCCCAAGCATTGACTAGGAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTTAGCATCTCCTTCTaGCTTCAAGGCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLSISF*LQGNDF
Trigger: GAAATCATTGCCTTGAAGCCAGAAGGAGATGCTAAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGCGTGCTGTCCCACTaGTTGCTGAGGTCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSVLSH*LLRSVK
Trigger: CTTTACGGACCTCAGCAACCAGTGGGACAGCACGCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAGGATGTCAAATCTTaGGCTTTCTGGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKDVKS*AFWRNF
Trigger: GAAATTCCTCCAGAAAGCCCAAGATTTGACATCCTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTTCAGTCTCCTGCTTaGCAGATTCGATTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFQSPA*QIRFCF
Trigger: AAAACAGAATCGAATCTGCCAAGCAGGAGACTGAAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACGGCATCTCTTCAACTaGCAGAGAAAACTTTACATG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRHLFN*QRKLYM
Trigger: CATGTAAAGTTTTCTCTGCCAGTTGAAGAGATGCCG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTACTGCTGCCACTCTCTaGCGGCTTCCAGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPTAATL*RLPANS
Trigger: TGAGTTTGCTGGAAGCCGCCAGAGAGTGGCAGCAGT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGGCCAGCAAACAACTaGTCTTTTCTATCCACACCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDWPANN*SFLSTP
Trigger: AGGTGTGGATAGAAAAGACCAGTTGTTTGCTGGCCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCTGAGCCTCGGGGATaGTGCTGGTCCTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAEPRG*CWSFLG
Trigger: ACCGAGGAAGGACCAGCACCATCCCCGAGGCTCAGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCCACAGCTCCAGCTTaGCCACTTGGGTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGATAPA*PLGSCR
Trigger: TCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCTCAAAGGCCACGTTaGCTTGTTGCAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPAQRPR*LVAATA
Trigger: AGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCTCAAAGGCCACGTTaGCTTGTTGCAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLAQRPR*LVAATA
Trigger: AGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCACTCGCTGCCACTaGCGGTTCATCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCTRCH*RFISPR
Trigger: CCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGGTTTTCTATATCCTaGCAGTCCAGTAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQWFSIS*QSSNSF
Trigger: GAAGCTGTTACTGGACTGCCAGGATATAGAAAACCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGATTTCAGGGCAAGCTaGTTTTCTATATCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDDFRAS*FSISWQ
Trigger: CTGCCAGGATATAGAAAACCAGCTTGCCCTGAAATC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGAAGCTCTGAGCTGGTaGACCTGGCTGGTCACGTTA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLEALSW*TWLVTL
Trigger: TAACGTGACCAGCCAGGTCCACCAGCTCAGAGCTTC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACAGAAGCTCTGAGCTaGTGGACCTGGCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTEALS*WTWLVT
Trigger: CGTGACCAGCCAGGTCCACCAGCTCAGAGCTTCTGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCAGACAGATTGGTGTTaGCAAGCTGTTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDQTDWC*QAVGTL
Trigger: CAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCAATGTCAGGTGACTaGGCTGTCAGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSMSGD*AVRAST
Trigger: CGTGCTGGCCCTGACAGCCCAGTCACCTGACATTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACACTTTGTTTTCCATCTaGACCAGCCAAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDTLFSI*TSQAHS
Trigger: ACTGTGTGCTTGGCTGGTCCAGATGGAAAACAAAGT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTACGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGC +
Preference number: 4 (lower is better)
Translates to: LQRLLGAVLLSPPHQSWLRRQQA*RAQTQC
Trigger: GCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACG...TAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGTCCAGGCTCCTGGTaGTCTGCTGGATTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCPGSW*SAGLSH
Trigger: GTGACTCAATCCAGCAGACCACCAGGAGCCTGGACA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGTTTCAGCTCCTCTTTaGCATTTGTATACAACACCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKVSAPL*HLYTTP
Trigger: AGGTGTTGTATACAAATGCCAAAGAGGAGCTGAAAC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTGCTTCAGCTTGCTaGCTGTGTCGGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSASAC*LCRCGS
Trigger: AGAACCGCACCGACACAGCCAGCAAGCTGAAGCAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACAGCCTGGATCTCCCTaGGGTCTTCTATGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLQPGSP*GLLCPS
Trigger: AGACGGACATAGAAGACCCCAGGGAGATCCAGGCTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCGCCAAGAGTCAGCCTaGATCTCCCTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGRQESA*ISLGSS
Trigger: AGAAGACCCCAGGGAGATCCAGGCTGACTCTTGGCG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCAGTGCGCTGTAGAATaGGCCCTCCTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGQCAVE*ALLVVF
Trigger: GAAGACGACGAGGAGGGCCCATTCTACAGCGCACTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLSAIS*MSEGGS
Trigger: CGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTGGCTTCGGGGCTCTaGCTTGGCAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVASGL*LGRYSL
Trigger: CAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCTTCACCAGAAGGCTaGAGGAAATCTCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPSPEG*RKSPAR
Trigger: CCTTGCGGGAGATTTCCTCCAGCCTTCTGGTGAAGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTGACAGGACATCAATaGAGGATTCCTTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVTGHQ*RIPFLH
Trigger: ATGAAGAAAAGGAATCCTTCATTGATGTCCTGTCAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGGATTGAAAGGCCATaGGAACATCCGAATGATAGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDWIERP*EHPNDS
Trigger: ACTATCATTCGGATGTTCTCATGGCCTTTCAATCCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTCTGCTGCCATAGCTaGCTCCTTAGACAGACTCGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLCCHS*LLRQTR
Trigger: ACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGGTTCGAAGGACTTTaGACATCCATCTGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRFEGL*TSICKV
Trigger: TACTTTACAGATGGATGTTCAAAGTCCTTCGAACCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTTGGATCTTTGCCTaGAGGCCAGCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSWIFA*RPALRT
Trigger: TGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTTCTAGCTGGCACTTaGTGCTTTCCGGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVLAGT*CFPETS
Trigger: GCTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGTTCAAAACACTCCTaGAGATTCGTTTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGSKHS*RFVLTL
Trigger: CAACGTCAAAACGAATCTTCAGGAGTGTTTTGAACC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCTTCTTCAGCTCTGTaGGCATCAGCCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGASSAL*ASASGP
Trigger: AGGACCTGAGGCTGATGCTCACAGAGCTGAAGAAGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAATCTTCTGTCCCACTaGAGATGTATTTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKNLLSH*RCILLD
Trigger: ATCAAGCAAAATACATCTTCAGTGGGACAGAAGATT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGGAAACACTTCCTGTaGGCCAGCTGCTCCACAAGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPWKHFL*ASCSTS
Trigger: ACTTGTGGAGCAGCTGGCTCACAGGAAGTGTTTCCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGAAACACTTCCTGTaGGCCAGCTGCTCCACAAGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWKHFL*ASCSTS
Trigger: ACTTGTGGAGCAGCTGGCTCACAGGAAGTGTTTCCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGGCGCTGTTGCTGCTaGTGCAGAGAAACCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRRCCC*CRETLR
Trigger: CCTTAAGGTTTCTCTGCATCAGCAGCAACAGCGCCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCAGCTTGCACTTTCTaGTCTGAGAAAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSACTF*SEKGCC
Trigger: ACAACATCCTTTCTCAGATCAGAAAGTGCAAGCTGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGCATCTCAGGTGTCTaGGGAGCTGACGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCISGV*GADGVS
Trigger: TGAAACTCCGTCAGCTCCTCAGACACCTGAGATGCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTCAGCTTGCCTTTCTaGAGAATGCTCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLSLPF*RMLRSS
Trigger: GGAGCTGCGGAGCATTCTTCAGAAAGGCAAGCTGAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGGTCACTTAACTCGTaGATGGTCTGGATTAAGTCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDWSLNS*MVWIKS
Trigger: TGACTTAATCCAGACCATTCACGAGTTAAGTGACCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAACTCATTTTGTTCCTaGGTCACATTTTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKNSFCS*VTFSKS
Trigger: ACTCTTGGAAAATGTGACTCAGGAACAAAATGAGTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGATGCTGGTCCTCACTaGACTTCTCCTGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLDAGPH*TSPEAP
Trigger: TGGTGCTTCAGGAGAAGTTCAGTGAGGACCAGCATC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCACACTCTCCAGGCTaGCTGTCAGAGCATCAATAC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAHSPG*LSEHQY
Trigger: GTATTGATGCTCTGACAGTCAGCCTGGAGAGTGTGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACGGCGTTCATCCAGCTaGTCATCTCGGAGATTGCTT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRRSSS*SSRRLL
Trigger: AAGCAATCTCCGAGATGATCAGCTGGATGAACGCCG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACGGCGTTCATCCAGCTaGTCATCTCGGAGATTGCTT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRRSSS*SSRRLL
Trigger: AAGCAATCTCCGAGATGATCAGCTGGATGAACGCCG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCTCAGCTTCATCCTaGAGGGCCTCAAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFSASS*RASRFC
Trigger: GCAGAACCTTGAGGCCCTTCAGGATGAAGCTGAGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCTCAGCTTCATCCTaGAGGGCCTCAAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFSASS*RASRFC
Trigger: GCAGAACCTTGAGGCCCTTCAGGATGAAGCTGAGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTCTCAGCTTCATCCTaGAGGGCCTCAAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFSASS*RASRFC
Trigger: GCAGAACCTTGAGGCCCTTCAGGATGAAGCTGAGAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCCTTCCAGCTTTCCTaGAGCCTGCTGATTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSFQLS*SLLICP
Trigger: CGGACAAATCAGCAGGCTTCAGGAAAGCTGGAAGGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCCTTCCAGCTTTCCTaGAGCCTGCTGATTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSFQLS*SLLICP
Trigger: CGGACAAATCAGCAGGCTTCAGGAAAGCTGGAAGGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCACCCTTGATCCGATaGCGTCAAAGAGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSPLIR*RQRDAA
Trigger: GGCAGCATCTCTTTGACGTCATCGGATCAAGGGTGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGTCTAACTGCTGAATaGAAGCAAACGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDCLTAE*KQTSPS
Trigger: TGAAGGAGACGTTTGCTTTCATTCAGCAGTTAGACA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCTCCCCAAACACGATaGGCTGGTCGATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGAPQTR*AGRSCW
Trigger: CCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCAGTCTCTTCACCCTaGGCGCTATTTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAVSSP*ALFPGC
Trigger: ACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCCCTGATCACCCTTaGGAGGAAGGAGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCPDHP*EEGASR
Trigger: CCGAGACGCTCCTTCCTCTCAAGGGTGATCAGGGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGACCACTGCCATCTTaGCTGAGCTTGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRPLPS*LSLSLG
Trigger: TCCAAGGCTCAAGCTCAGGCAAGATGGCAGTGGTCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGACCACTGCCATCTTaGCTGAGCTTGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRPLPS*LSLSLG
Trigger: TCCAAGGCTCAAGCTCAGGCAAGATGGCAGTGGTCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCTTTAGAAATAGATaGGGCAACTTCTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFFRNR*GNFSTA
Trigger: AGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTCCCACTTGGCACTTaGGACTCGACTCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLPLGT*DSTLFF
Trigger: GAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAAATCAGAAAGTTTTTaGAGCCTTTGTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQKSESF*SLCSRL
Trigger: GAGCCTGGAACAAAGGCTGCAAAAACTTTCTGATTT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGGACGGTCTCTACCTaGTGTATTTTACTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDRTVST*CILLFP
Trigger: AGGAAACAGTAAAATACAGCAGGTAGAGACCGTCCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAACAGAATCCTGGAGCTaGTGGAGAAGGCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPTESWS*WRRLSC
Trigger: GCATGAGAGCCTTCTCCAGCAGCTCCAGGATTCTGT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAAACTCACACTTGATTaGCTGGAGCTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLKLTLD*LELSGW
Trigger: CCAGCCGCTGAGCTCCAGGCAATCAAGTGTGAGTTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTTCTGAAGCACTGCTaGTTTGTCATGGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFLKHC*FVMEFS
Trigger: AGAGAATTCCATGACAAAGCAGCAGTGCTTCAGAAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGAGAGTCCAACAACTaGCAGAGTTCCTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRESNN*QSSSVG
Trigger: TCCCACCGAGGAACTCTGGCAGTTGTTGGACTCTCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCGTTCAGCTTGGAATaGCAGAGGTCGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSFSLE*QRSSSS
Trigger: GGATGAGCTCGACCTCTGGCATTCCAAGCTGAACGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTGGCCTTGTTGAGCTaGGAGGTTCTGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVALLS*EVLDSA
Trigger: AGCAGAATCCAGAACCTCGCAGCTCAACAAGGCCAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCCATTTCTGTAGCATaGTCTGAAGCTGCGCACCAC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPISVA*SEAAHH
Trigger: GTGGTGCGCAGCTTCAGAGCATGCTACAGAAATGGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCATCTCCCCGAGGTaGTCAGCAAACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFISPR*SANSVL
Trigger: AAGGACGGAGTTTGCTGAGCACCTCGGGGAGATGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCATCTCCCCGAGGTaGTCAGCAAACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFISPR*SANSVL
Trigger: AAGGACGGAGTTTGCTGAGCACCTCGGGGAGATGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTGCCAATGACCTCCTaGAGTTTCTCCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLPMTS*SFSQLR
Trigger: ACGGAGCTGGGAGAAACTGCAGGAGGTCATTGGCAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGGATCTTCGCTTTGTaGCTTCAGAGCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGIFAL*LQSLQP
Trigger: AGGCTGCAGGCTCTGAAGGCACAAAGCGAAGATCCC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCCATCTGCTTCAGCTaGAGTTTGTTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPICFS*SLFSVN
Trigger: ATTCACAGAAAACAAACTGCAGCTGAAGCAGATGGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACCAGGTACGAAGGTTaGTCATGTTTTTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTRYEG*SCFCLT
Trigger: AGTTAGACAAAAACATGAGCAACCTTCGTACCTGGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGAATGCTCTCCCTGGTaGCCTCAAACTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPECSPW*PQTLPS
Trigger: AGAGGGAAGAGTTTGAGGGCACCAGGGAGAGCATTC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGGCTGTCAGGAACATaGCACGGGTGGCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGLSGT*HGWPSE
Trigger: TTCTGAGGGCCACCCGTGGCATGTTCCTGACAGCCC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCGAGGTGGGGCATCCTaGTGTCTGTCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRGGAS*CLSPPP
Trigger: AGGAGGAGGAGACAGACAGCAGGATGCCCCACCTCG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACACTCCAAACTGCTTTaGAAAGGCTGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHSKLL*KGCWEL
Trigger: CAGCTCCCAGCAGCCTTTGCAAAGCAGTTTGGAGTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAATGAAACTCCAGGAGTaGGATGAAGTTTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQMKLQE*DEVFTQ
Trigger: TTGGGTAAAAACTTCATCCCACTCCTGGAGTTTCAT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCTCTCCTGCTCACTaGCAAAGTCAGACGTCACCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSSPAH*QSQTSP
Trigger: GGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCAGTCTTTCACAGGTaGTATTCTCCCCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPVFHR*YSPLPR
Trigger: CCGAGGGAGGGGAGAATACCACCTGTGAAAGACTGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCGATGCTTCACGGCTaGAGCAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPMLHG*SSRILK
Trigger: CTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTCAGTTTTGTTTCTaGTGGTTCAAAACACTCCTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAQFCF*WFKTLL
Trigger: CAGGAGTGTTTTGAACCACCAGAAACAAAACTGAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCCCCTGCTCGGGCCTaGCATATGGACTCCATATTT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSPARA*HMDSIF
Trigger: AAATATGGAGTCCATATGCCAGGCCCGAGCAGGGGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCACACTTGATTGCCTaGAGCTCAGCGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSHLIA*SSAAGV
Trigger: CACTCCAGCCGCTGAGCTCCAGGCAATCAAGTGTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGCAGGTCGGCCACTTaGTTCTGTGACACATGTTCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGRSAT*FCDTCS
Trigger: TGAACATGTGTCACAGAACCAAGTGGCCGACCTGCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGGAAGAACACCTGCTaGGCACATGCATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPWKNTC*AHASSL
Trigger: CAGAGAGGATGCATGTGCCCAGCAGGTGTTCTTCCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAAGAGGCTCTCAGTGTaGCCGTGTCTGCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPKRLSV*PCLPLS
Trigger: TGAAAGAGGCAGACACGGCCACACTGAGAGCCTCTT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGAAGCTCTGAGCTGGTaGACCTGGCTGGTCACGTTA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGEALSW*TWLVTL
Trigger: TAACGTGACCAGCCAGGTCCACCAGCTCAGAGCTTC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCGTCAGCGACTGCCTaGTTTGTAGAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPASATA*FVETSA
Trigger: AGCTGAAGTCTCTACAAACCAGGCAGTCGCTGACGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCGTCAGCGACTGCCTaGTTTGTAGAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGASATA*FVETSA
Trigger: AGCTGAAGTCTCTACAAACCAGGCAGTCGCTGACGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGATTGGTCTGACAGCTTaGAGAATTCAGAGACAAATT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKIGLTA*RIQRQI
Trigger: AATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAAT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGTCCAGGCTCCTGGTaGTCTGCTGGATTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCPGSW*SAGLSH
Trigger: GTGACTCAATCCAGCAGACCACCAGGAGCCTGGACA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGAAGAAGTGTTCTACGTTaGTCAGCTGCAGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: GSCSPESTSSKLVREASGRSVLR*SAAGPF
Trigger: AAATGGACCTGCAGCTGACCAACGTAGAACACTTCT...TCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGGAAGCCGTTCAGTTaGCGCATCTTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGWKPFS*RILSSA
Trigger: CGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCAGCCTGGATCTCCCTaGGGTCTTCTATGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGQPGSP*GLLCPS
Trigger: AGACGGACATAGAAGACCCCAGGGAGATCCAGGCTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGACTGGGGAGATGTaGGCTCCTCGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVTGEM*APRSLS
Trigger: GGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGTGGCCCTCAGAAATaGATTTACCTGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGGPQK*IYLTVR
Trigger: GCGCACTGTCAGGTAAATCCATTTCTGAGGGCCACC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGTGGCCCTCAGAAATaGATTTACCTGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGGPQK*IYLTVR
Trigger: GCGCACTGTCAGGTAAATCCATTTCTGAGGGCCACC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAVPLK*PAAHLP
Trigger: AGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPAVPLK*PAAHLP
Trigger: AGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPAVPLK*PAAHLP
Trigger: AGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLSAIS*MSEGGS
Trigger: CGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp TCTTGCAGTTGCTTGAGTTTCTTCTCGATCACGTGGACCTTCTCTTCGGCCTCAGGCAGATATTCCTTGTaGCTCACATTGACGGAGACC +
Preference number: 4 (lower is better)
Translates to: SCSCLSFFSITWTFSSASGRYSL*LTLTET
Trigger: GGTCTCCGTCAATGTGAGCCACAAGGAATATCTGCC...TGAGGCCGAAGAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTCGGGGCTCTGGCTTaGCAGATATTCCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFGALA*QIFLVA
Trigger: AGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGACATGCCCCTTCTTaGTGTCTGCGAATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGHAPS*CLRISQ
Trigger: CTGACTTATTCGCAGACATCAAGAAGGGGCATGTCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGAGCACTTAGAGTCATaGAACTCCAGGAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGEHLES*NSRSGM
Trigger: CATCCCACTCCTGGAGTTTCATGACTCTAAGTGCTC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAAGCTTGCTGGGAGATaGTGCCCTCTTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGKLAGR*CPLPSE
Trigger: TTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTAGCGAGCCTATTTTaGGGCTTTCCACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLASLF*GFPLLP
Trigger: TGGCAGAAGTGGAAAGCCTCAAAATAGGCTCGCTAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTAGCGAGCCTATTTTaGGGCTTTCCACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLASLF*GFPLLP
Trigger: TGGCAGAAGTGGAAAGCCTCAAAATAGGCTCGCTAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACACTCAGCCTCTTTCTaGAGCACTGCTGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHSASF*STAALS
Trigger: TGACAAAGCAGCAGTGCTTCAGAAAGAGGCTGAGTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACTCAGCCTCTTTCTaGAGCACTGCTGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHSASF*STAALS
Trigger: TGACAAAGCAGCAGTGCTTCAGAAAGAGGCTGAGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACAGAGTGCTTTCTGGTaGCATACTGGGGACTTTCAG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPQSAFW*HTGDFQ
Trigger: CTGAAAGTCCCCAGTATGTCACCAGAAAGCACTCTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTCTGGGATACTTGTTaGTGTTGCTGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLWDTC*CCWKGA
Trigger: GGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCTCAGCTTCCTTTCTaGAGCATCCCTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAQLPF*SIPLGH
Trigger: GTGGCCGAGAGGGATGCTTCAGAAAGGAAGCTGAGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTTCGGCCTCCTCCTTaGCCACTGGCAGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLRPPP*PLAGKT
Trigger: TGTCTTTCCTGCCAGTGGTCAAGGAGGAGGCCGAAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGTCGATTCTCTTGTTaGGGGACAGCCATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGRFSC*GTAIAL
Trigger: AAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGTCCTGGGACACGTTaGGGGATTGTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGPGTR*GIVLSS
Trigger: ACTGGAAAGAACAATCCCTCAACGTGTCCCAGGACC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCTCCATGGAATATGTaGGTTGGGTTGTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPAPWNM*VGLSSW
Trigger: CCATGAGGACAACCCAACTCACATATTCCATGGAGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCTCCATGGAATATGTaGGTTGGGTTGTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAPWNM*VGLSSW
Trigger: CCATGAGGACAACCCAACTCACATATTCCATGGAGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTTGTTCGCCACCTCTaGAGATGGATCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVVRHL*RWISLL
Trigger: GAGCAAAGAGATCCATCTTCAGAGGTGGCGAACAAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCTTCCAGCTTTCCTaGAGCCTGCTGATTTGTCCG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSFQLS*SLLICP
Trigger: CGGACAAATCAGCAGGCTTCAGGAAAGCTGGAAGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCATTTCTTCAATGCTaGCATCTGCTGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSFLQC*HLLSVE
Trigger: TTCTACAGACAGCAGATGTCAGCATTGAAGAAATGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGTGGTCTGCTGGATTaGGTCACACTCCGTTTCATT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGGLLD*VTLRFI
Trigger: AATGAAACGGAGTGTGACTCAATCCAGCAGACCACC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACATGCGTCGCTCCATTaGCATGGCACAAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHASLH*HGTNVP
Trigger: AGGAACATTTGTGCCATGTCAATGGAGCGACGCATG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLSVTL*EVFYVG
Trigger: ACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGTTGGTGTTCAGTGTaGTCTCCTGTTGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCWCSV*SPVGSR
Trigger: ACGGCTTCCAACAGGAGATCACACTGAACACCAACA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGTTGGTGTTCAGTGTaGTCTCCTGTTGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCWCSV*SPVGSR
Trigger: ACGGCTTCCAACAGGAGATCACACTGAACACCAACA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGTTGGTGTTCAGTGTaGTCTCCTGTTGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPCWCSV*SPVGSR
Trigger: ACGGCTTCCAACAGGAGATCACACTGAACACCAACA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGCTCATCTTCCTGCTaGGCCTCCTTTAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCSSSC*ASFKPS
Trigger: AGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGCTCATCTTCCTGCTaGGCCTCCTTTAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCSSSC*ASFKPS
Trigger: AGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTCCCACTTGGCACTTaGGACTCGACTCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLPLGT*DSTLFF
Trigger: GAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGAGGAAGTACTATCTaGAGCGCCATCTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRGSTI*SAISSD
Trigger: GTCACTGGAGATGGCGCTGCAGATAGTACTTCCTCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGAGGAAGTACTATCTaGAGCGCCATCTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRGSTI*SAISSD
Trigger: GTCACTGGAGATGGCGCTGCAGATAGTACTTCCTCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTCCAGCTGGAGTCTaGACTTCAGCACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSPAGV*TSAQCP
Trigger: AGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGCTGCTCTCAGAGATaGCAAAAACCCTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSCSQR*QKPFQS
Trigger: GCTCTGGAAGGGTTTTTGGCATCTCTGAGAGCAGCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAACTCTCCCACAAGGCTaGTGTGTCTTCACACTGTTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPTLPQG*CVFTLL
Trigger: CAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAATTTTTAACTGGGCCTaGTTCTCTGGCAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGIFNWA*FSGNPG
Trigger: GCCTGGGTTGCCAGAGAAGCAGGCCCAGTTAAAAAT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCACCCATGTTCAAGGTaGTTCATTTGGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPHPCSR*FIWLST
Trigger: GGTGGAGAGCCAAATGAAGCACCTTGAACATGGGTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGGCATCGTTTTCTGTaGTCCTGCATCTCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPWHRFL*SCISGV
Trigger: GACACCTGAGATGCAGGAGCACAGAAAACGATGCCA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGTGGCCTTGTTGAGCTaGGAGGTTCTGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGVALLS*EVLDSA
Trigger: AGCAGAATCCAGAACCTCGCAGCTCAACAAGGCCAC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAACCTTTTTCTCCATTaGTTTTACTTCAGACTCGAT +
Preference number: 4 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKNLFLH*FYFRLD
Trigger: ATCGAGTCTGAAGTAAAAGCAATGGAGAAAAAGGTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCACATTCAGCAGTCTaGTTTATGACAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSHSAV*FMTTFS
Trigger: ACTGAAGGTTGTCATAAAGCAGACTGCTGAATGTGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSATLAC*SHSSSL
Trigger: CAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTCAGTTTGGCGACTTaGTTCTCAGAGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLSLAT*FSEFCS
Trigger: GCTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTCAGTTTGGCGACTTaGTTCTCAGAGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLSLAT*FSEFCS
Trigger: GCTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCCGCAACTTGCTCTaGTCCAAATCCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFRNLL*SKSLSL
Trigger: AAGGGAGAGGGATTTGGAGCAGAGCAAGTTGCGGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCCGCAACTTGCTCTaGTCCAAATCCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFRNLL*SKSLSL
Trigger: AAGGGAGAGGGATTTGGAGCAGAGCAAGTTGCGGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAACAGCTCACAGATGCTaGCAGCTGTCTGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPTAHRC*QLSAFI
Trigger: AATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACAGCTCACAGATGCTaGCAGCTGTCTGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTAHRC*QLSAFI
Trigger: AATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTACCGCAGGCTTGCTGTaGTCCATGGAATATGTGAGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPTAGLL*SMEYVS
Trigger: ACTCACATATTCCATGGAGCACAGCAAGCCTGCGGT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAACCGCAGGCTTGCTGTaGTCCATGGAATATGTGAGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPTAGLL*SMEYVS
Trigger: ACTCACATATTCCATGGAGCACAGCAAGCCTGCGGT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATTTCTCTTCGATTATaGCAGCCATGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPISLRL*QPWRGR
Trigger: CCTGCCCCTCCATGGCTGGCATAATCGAAGAGAAAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAATTTCTCTTCGATTATaGCAGCCATGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLISLRL*QPWRGR
Trigger: CCTGCCCCTCCATGGCTGGCATAATCGAAGAGAAAT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAAGCTGTTGGAACTTTaGTTCCTGCTGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGKLLEL*FLLLQP
Trigger: TGGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAAGCTGTTGGAACTTTaGTTCCTGCTGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPKLLEL*FLLLQP
Trigger: TGGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGTGCCTTCAGAGCCTaGAGCCTCTTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCAFRA*SLFFSF
Trigger: GAAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGTGCCTTCAGAGCCTaGAGCCTCTTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCAFRA*SLFFSF
Trigger: GAAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGCAAAAGCTGGATCTaGTCCTTCAGAACCGTCACG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCKSWI*SFRTVT
Trigger: CGTGACGGTTCTGAAGGAGCAGATCCAGCTTTTGCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCCTCCCATTGTCTGTaGAAAAGCTGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSSHCL*KSWICS
Trigger: GGAGCAGATCCAGCTTTTGCACAGACAATGGGAGGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRAQTQ*EPTRYE
Trigger: TTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRAQTQ*EPTRYE
Trigger: TTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGTTCGATATCTCGCTaGAGATCCTGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCSISR*RSCCSA
Trigger: TGCTGAGCAGCAGGATCTGCAGCGAGATATCGAACA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGTTCGATATCTCGCTaGAGATCCTGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCSISR*RSCCSA
Trigger: TGCTGAGCAGCAGGATCTGCAGCGAGATATCGAACA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACACAGACTCCACCCCTaGACTGTGTTGTTCGATATC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHRLHP*TVLFDI
Trigger: GATATCGAACAACACAGTGCAGGGGTGGAGTCTGTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACAGACTCCACCCCTaGACTGTGTTGTTCGATATC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHRLHP*TVLFDI
Trigger: GATATCGAACAACACAGTGCAGGGGTGGAGTCTGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGAATGCTCTCCCTGGTaGCCTCAAACTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGECSPW*PQTLPS
Trigger: AGAGGGAAGAGTTTGAGGGCACCAGGGAGAGCATTC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCTACGTTGGTCAGCTaGAGGTCCATTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSTLVS*RSISVS
Trigger: GCTCACAGAAATGGACCTGCAGCTGACCAACGTAGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTACGTTGGTCAGCTaGAGGTCCATTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSTLVS*RSISVS
Trigger: GCTCACAGAAATGGACCTGCAGCTGACCAACGTAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTCCACTCCAAACTTTaGAAAGGCTGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFHSKL*KGCWEL
Trigger: CAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000139204.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTTGGATCAGAGTCCTaGCTTCAGAGTAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLGSES*LQSNSG
Trigger: CCCAGAGTTACTCTGAAGCCAGGACTCTGATCCAAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTTGGATCAGAGTCCTaGCTTCAGAGTAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLGSES*LQSNSG
Trigger: CCCAGAGTTACTCTGAAGCCAGGACTCTGATCCAAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCTCTGAGGACATTTTaGAAGGGCTCCAGGTTCGAA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLALRTF*KGSRFE
Trigger: TTCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGTCAGACGTCACCCTaGATTTGCTGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSQTSP*ICCLAG
Trigger: ACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGTCAGACGTCACCCTaGATTTGCTGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSQTSP*ICCLAG
Trigger: ACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCATGGTCTCCAGCTaGAGTCTGCACTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFMVSS*SLHFST
Trigger: TGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTCATCTCTACCTTCTaGTTCATGGTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLISTF*FMVSSW
Trigger: CCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCTTCCTCTTTACTCTaGCCATCCATGGCCACTAAG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPSSLL*PSMATK
Trigger: CTTAGTGGCCATGGATGGCCAGAGTAAAGAGGAAGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCTTCCTCTTTACTCTaGCCATCCATGGCCACTAAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPSSLL*PSMATK
Trigger: CTTAGTGGCCATGGATGGCCAGAGTAAAGAGGAAGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTTTGCACAGAATCCTaGAGCTGCTGGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFCTES*SCWRRL
Trigger: GAGCCTTCTCCAGCAGCTCCAGGATTCTGTGCAAAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCTTAGCCATTATTTaGTCCTTAGATCCATCACAA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSLAII*SLDPSQ
Trigger: TTGTGATGGATCTAAGGACCAAATAATGGCTAAGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTTCGCTGTGTTCTGTaGCTTGCTGGAAACACTTCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVRCVL*LAGNTS
Trigger: GGAAGTGTTTCCAGCAAGCCACAGAACACAGCGAAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGCAGTGCTTGGTGTTaGCTCTGTAAATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSSAWC*LCKSSR
Trigger: CCTGGAGGATTTACAGAGCCAACACCAAGCACTGCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCACCTGCTGGACGTGTaGGAGGGCCTCCATTATCTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSHLLDV*EGLHYL
Trigger: CAGATAATGGAGGCCCTCCCACACGTCCAGCAGGTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTCTTTTTCATGGGATaGATGTTTTCAAGTATGACC +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVFFMG*MFSSMT
Trigger: GGTCATACTTGAAAACATCCATCCCATGAAAAAGAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTCCTCCTTGACCACTaGCAGGAAAGACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLLLDH*QERHGV
Trigger: AACTCCATGTCTTTCCTGCCAGTGGTCAAGGAGGAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGGAAGAACACCTGCTaGGCACATGCATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGWKNTC*AHASSL
Trigger: CAGAGAGGATGCATGTGCCCAGCAGGTGTTCTTCCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCAAGAGCCAGTTTCTaGAAGAACACCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSRASF*KNTCWA
Trigger: TGCCCAGCAGGTGTTCTTCCAGAAACTGGCTCTTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATTCTGGTAGCAACGTaGCTTCCTTGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGILVAT*LPCQAK
Trigger: CTTGGCCTGGCAAGGAAGCCACGTTGCTACCAGAAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCACAGGTGCTTAGCTaGAGCAGCGACTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSQVLS*SSDWLT
Trigger: TGTTAACCAGTCGCTGCTCCAGCTAAGCACCTGTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCACAGGTGCTTAGCTaGAGCAGCGACTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSQVLS*SSDWLT
Trigger: TGTTAACCAGTCGCTGCTCCAGCTAAGCACCTGTGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGGTTGTCCTCATGGTaGCCTCATCATAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGLSSW*PHHRAC
Trigger: ACAAGCTCTATGATGAGGCCACCATGAGGACAACCC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGGTTGTCCTCATGGTaGCCTCATCATAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGLSSW*PHHRAC
Trigger: ACAAGCTCTATGATGAGGCCACCATGAGGACAACCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGGTTGTCCTCATGGTaGCCTCATCATAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGLSSW*PHHRAC
Trigger: ACAAGCTCTATGATGAGGCCACCATGAGGACAACCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTGTTGGCAAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVLASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTCCTTCAGGGCCCGTaGCAGGATATCTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVLQGP*QDICQV
Trigger: AACCTGGCAGATATCCTGCCACGGGCCCTGAAGGAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCAATGTCAGGTGACTaGGCTGTCAGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSMSGD*AVRAST
Trigger: CGTGCTGGCCCTGACAGCCCAGTCACCTGACATTGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCGTCAGCGACTGCCTaGTTTGTAGAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGASATA*FVETSA
Trigger: AGCTGAAGTCTCTACAAACCAGGCAGTCGCTGACGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTGGCCTTGATCAGCTaGTCGCCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLALIS*SPICFS
Trigger: GCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRRQQA*RAQTQC
Trigger: GCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCAGCAAGCCTCTTCTaGATCTCCTGGTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSASLF*ISWLSQ
Trigger: CTGCGATAACCAGGAGATCCAGAAGAGGCTTGCTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCAGCAAGCCTCTTCTaGATCTCCTGGTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSASLF*ISWLSQ
Trigger: CTGCGATAACCAGGAGATCCAGAAGAGGCTTGCTGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCAGCAAGCCTCTTCTaGATCTCCTGGTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSASLF*ISWLSQ
Trigger: CTGCGATAACCAGGAGATCCAGAAGAGGCTTGCTGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTTTCAGCTCCTCTTTaGCATTTGTATACAACACCT +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVSAPL*HLYTTP
Trigger: AGGTGTTGTATACAAATGCCAAAGAGGAGCTGAAAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGATTGTCCCAGCGCTaGTTGCCCTCGTGCACCATC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRLSQR*LPSCTI
Trigger: GATGGTGCACGAGGGCAACCAGCGCTGGGACAATCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCGCCAAGAGTCAGCCTaGATCTCCCTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRQESA*ISLGSS
Trigger: AGAAGACCCCAGGGAGATCCAGGCTGACTCTTGGCG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGTGGCCCTCAGAAATaGATTTACCTGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGGPQK*IYLTVR
Trigger: GCGCACTGTCAGGTAAATCCATTTCTGAGGGCCACC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGAACATGCCACGGGTaGCCCTCAGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGTCHG*PSEMDL
Trigger: TAAATCCATTTCTGAGGGCCACCCGTGGCATGTTCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGAACATGCCACGGGTaGCCCTCAGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGTCHG*PSEMDL
Trigger: TAAATCCATTTCTGAGGGCCACCCGTGGCATGTTCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGCAGATATTCCTTGTaGCTCACATTGACGGAGACC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGRYSL*LTLTET
Trigger: GGTCTCCGTCAATGTGAGCCACAAGGAATATCTGCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATATTTTGGAGTTCTGTaGCTTCGGGGCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPYFGVL*LRGSGL
Trigger: CAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
3UTR CAA 72 bp CAAGGACATCAGATCTTGAGCCACTTGCTCTTGCAGTaGCTTGAGTTTCTTCTCGATCACGTGGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: QGHQILSHLLLQ*LEFLLDHVDLL
Trigger: GAGAAGGTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 72 bp TCTCTGCAAGGACATCAGATCTTGAGCCACTTGCTCTaGCAGTTGCTTGAGTTTCTTCTCGATCACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLQGHQILSHLL*QLLEFLLDHVD
Trigger: GTCCACGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 72 bp ATCCGGATCCAGGCTTCTCTGCAAGGACATCAGATCTaGAGCCACTTGCTCTTGCAGTTGCTTGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IRIQASLQGHQI*SHLLLQLLEFL
Trigger: AAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTGCAGAGAAGCCTGGATCCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTCTCGGCATTGGATTaGAAGGCCATGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFSALD*KAMRTS
Trigger: GGATGTTCTCATGGCCTTTCAATCCAATGCCGAGAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCTCGGCATTGGATTaGAAGGCCATGAGAACATCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFSALD*KAMRTS
Trigger: GGATGTTCTCATGGCCTTTCAATCCAATGCCGAGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGAGCACTTAGAGTCATaGAACTCCAGGAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGEHLES*NSRSGM
Trigger: CATCCCACTCCTGGAGTTTCATGACTCTAAGTGCTC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAACTTCTCTACTGCTaGCTCCAATCAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQLLYC*LQSGNS
Trigger: GGAGTTTCCTGATTGGAGTCAGCAGTAGAGAAGTTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGACTGCAGGGTTGTGTaGATCTCAGAAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLDCRVV*ISEAHF
Trigger: GAAATGTGCTTCTGAGATTCACACAACCCTGCAGTC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTTCAAGGCTCTCTGTaGCAGAAGCTTTCGTACTCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVQGSL*QKLSYS
Trigger: AGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAAGCTTGCTGGGAGATaGTGCCCTCTTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGKLAGR*CPLPSE
Trigger: TTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCAGTTCTTGACTCCTaGGCCAGCTGTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPVLDS*ASCQAP
Trigger: AGGAGCTTGACAGCTGGCTCAGGAGTCAAGAACTGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTAATTCCAGTTCTTaGCTCCTGAGCCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSNSSS*LLSQLS
Trigger: TGACAGCTGGCTCAGGAGTCAAGAACTGGAATTAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCTTCTTCAGCTCTGTaGGCATCAGCCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSASSAL*ASASGP
Trigger: AGGACCTGAGGCTGATGCTCACAGAGCTGAAGAAGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGATTCTGCAGCTCGTTaGCTTCCCGCTCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSDSAAR*LPAHLG
Trigger: CCCAAGATGAGCGGGAAGTCAACGAGCTGCAGAATC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCGAAGCTTGCTCAGTaGGCCTTGCTGGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAKLAQ*ALLVFH
Trigger: GTGGAAAACCAGCAAGGCTCACTGAGCAAGCTTCGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACAAAGCCTCTTCATGTaGAGCTCAGCTTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGQSLFM*SSACHF
Trigger: AAAGTGGCAAGCTGAGCTTCACATGAAGAGGCTTTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTTCATTCTCTTGGTaGCCCTGCAGCCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSSFSW*PCSHVF
Trigger: GAAAACATGGCTGCAGGGTCACCAAGAGAATGAAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGTCGATTCTCTTGTTaGGGGACAGCCATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGRFSC*GTAIAL
Trigger: AAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCGGCCTTCATAGTCTaGAGTTCTTTCAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSAFIV*SSFKLC
Trigger: GCACAGCTTGAAAGAACTTCAGACTATGAAGGCCGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCGGCCTTCATAGTCTaGAGTTCTTTCAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSAFIV*SSFKLC
Trigger: GCACAGCTTGAAAGAACTTCAGACTATGAAGGCCGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp TGTTGGAAGCCGTTCAGTTGGCGCATCTTGTCCTCAGCGTCACTCTCTGAGAAGTTTTTGTCTAACTGCTaGATGAAAGCAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: CWKPFSWRILSSASLSEKFLSNC*MKANVS
Trigger: GGAGACGTTTGCTTTCATTCAGCAGTTAGACAAAAA...CTTCTCAGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAACGGCTTCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR TCA 90 bp GGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGATTTTTGTCTAACTGCTaGATGAAAGCAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSCSPESTSSKLVREASGFLSNC*MKANVS
Trigger: GGAGACGTTTGCTTTCATTCAGCAGTTAGACAAAAA...TCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCTCCCCAAACACGATaGGCTGGTCGATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAPQTR*AGRSCW
Trigger: CCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGCTCATCTTCCTGCTaGGCCTCCTTTAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCSSSC*ASFKPS
Trigger: AGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGTCCTGGCACTGCATaGGTGACTGCCGTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSPGTA*VTAVSL
Trigger: GAGACTTACGGCAGTCACTCATGCAGTGCCAGGACT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTTCAGCTCATGTTCTaGGATCCTGAAGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLQLMF*DPEGLF
Trigger: AAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACGTCACCCTGGATTTaGTGTCTTGCAGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTSPWI*CLAGVA
Trigger: AGCAACACCTGCAAGACAGCAAATCCAGGGTGACGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCAGCCAGTAAGACCTaGAGTTCTGCCAGTTTACTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSASKT*SSASLL
Trigger: GAGTAAACTGGCAGAACTGCAGGTCTTACTGGCTGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCAATCTCAACAGGATaGAGGTCCTGGACAGCCACT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSISTG*RSWTAT
Trigger: AGTGGCTGTCCAGGACCTGCATCCTGTTGAGATTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGAGGACTCCATGACCTaGAGTTCAAGTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPEDSMT*SSSGFS
Trigger: TGAGAAACCACTTGAACTGCAGGTCATGGAGTCCTC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGAGGACTCCATGACCTaGAGTTCAAGTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGEDSMT*SSSGFS
Trigger: TGAGAAACCACTTGAACTGCAGGTCATGGAGTCCTC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAAGCCTGCTTCTTGCTaGTTCTTCAGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGKPASC*FFSSVS
Trigger: GCTCACAGAGCTGAAGAAGCAGCAAGAAGCAGGCTT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTTGGAAACGGAGTCTaGTCTCCAGCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLGNGV*SPAPVT
Trigger: AGTTACAGGAGCTGGAGAGCAGACTCCGTTTCCAAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAAAAATGTGTCCAGCTaGTTAATTTTTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQKNVSS*LIFPST
Trigger: AGTGGAAGGAAAAATTAAGCAGCTGGACACATTTTT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCCCCTTTCTTAATCTaGAGATCCACAGCCCTTATC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAPFLI*RSTALI
Trigger: GATAAGGGCTGTGGATCTGCAGATTAAGAAAGGGGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAAAGTACAACGAAGTTaGTCTTTGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLKVQRS*SLASGL
Trigger: CAGCCCTGAGGCCAAAGAGCAACTTCGTTGTACTTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTCCGCAGGGACTATaGTGTACATCTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSPQGL*CTSRNT
Trigger: AGTATTCCGAGATGTACAGCATAGTCCCTGCGGAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGAAGGCTGTGTTTCTaGTCAGAATCTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRRLCF*SESSRA
Trigger: GGCTCTGGAAGATTCTGAGCAGAAACACAGCCTTCT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCTTCCACCACCTGTTaGATGTCCGCGTCTACAGTT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSSTTC*MSASTV
Trigger: AACTGTAGACGCGGACATGCAACAGGTGGTGGAAGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGCTTCTCAGAGTTCTaGAGCTCTGCTGTATGCACA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCFSEF*SSAVCT
Trigger: TGTGCATACAGCAGAGCTGCAGAACTCTGAGAAGCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGCTTCTCAGAGTTCTaGAGCTCTGCTGTATGCACA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCFSEF*SSAVCT
Trigger: TGTGCATACAGCAGAGCTGCAGAACTCTGAGAAGCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCTTGTAACTGGGCCTaGAAAGCAGCTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSCNWA*KAALLL
Trigger: CAAGAGCAAAGCTGCTTTGCAGGCCCAGTTACAAGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGCAAAGCCGGGCATaGTTCCCATCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWQSRA*FPSMFL
Trigger: AAGAAACATTGATGGGAAGCATGCCCGGCTTTGCCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACCGCAGGCTTGCTGTaGTCCATGGAATATGTGAGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTAGLL*SMEYVS
Trigger: ACTCACATATTCCATGGAGCACAGCAAGCCTGCGGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAATAAGACCGCAGGCTTaGTGTGCTCCATGGAATATG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPIRPQA*CAPWNM
Trigger: CATATTCCATGGAGCACAGCAAGCCTGCGGTCTTAT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGGATCTTCGCTTTGTaGCTTCAGAGCCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGIFAL*LQSLQP
Trigger: AGGCTGCAGGCTCTGAAGGCACAAAGCGAAGATCCC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCTCCCATTGTCTGTaGAAAAGCTGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSSHCL*KSWICS
Trigger: GGAGCAGATCCAGCTTTTGCACAGACAATGGGAGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTGTCTTCAATCTCCTaGTTGCGGATAGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLSSIS*LRIATL
Trigger: AAGAGTGGCTATCCGCAAGCAGGAGATTGAAGACAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTGTCTTCAATCTCCTaGTTGCGGATAGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLSSIS*LRIATL
Trigger: AAGAGTGGCTATCCGCAAGCAGGAGATTGAAGACAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTGTCTTCAATCTCCTaGTTGCGGATAGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLSSIS*LRIATL
Trigger: AAGAGTGGCTATCCGCAAGCAGGAGATTGAAGACAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGGAACCAGGTACGAAGGTTaGTCATGTTTTTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: GSCSPESTSSKLVREASGTRYEG*SCFCLT
Trigger: AGTTAGACAAAAACATGAGCAACCTTCGTACCTGGT...TCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGTTCGATATCTCGCTaGAGATCCTGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCSISR*RSCCSA
Trigger: TGCTGAGCAGCAGGATCTGCAGCGAGATATCGAACA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACAGGCATCAGAGTCATaGAGAAGGACGTCACAGATA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGQASES*RRTSQI
Trigger: TATCTGTGACGTCCTTCTGCATGACTCTGATGCCTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACAGGCATCAGAGTCATaGAGAAGGACGTCACAGATA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLQASES*RRTSQI
Trigger: TATCTGTGACGTCCTTCTGCATGACTCTGATGCCTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTTTGCTGTCATCGGTaGCTTGACGTAATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLCCHR*LDVIAA
Trigger: AGCTGCTATTACGTCAAGGCACCGATGACAGCAAAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCTTTAAGCCTTCTTTaGTGTCATCGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPLSLL*CHRCLD
Trigger: GTCAAGGCACCGATGACAGCAAAGAAGGCTTAAAGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCTTTAAGCCTTCTTTaGTGTCATCGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPLSLL*CHRCLD
Trigger: GTCAAGGCACCGATGACAGCAAAGAAGGCTTAAAGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCACTGCATGAGTGACTaGCGTAAGTCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSHCMSD*RKSPRQ
Trigger: CTGGCGAGGAGACTTACGGCAGTCACTCATGCAGTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTACCAGAAGATGCTTaGAAAGATTTTGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLPEDA*KDFVVI
Trigger: AATGACCACAAAATCTTTGCAAGCATCTTCTGGTAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000132161.2
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTTCCACTCCAAACTTTaGAAAGGCTGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGFHSKL*KGCWEL
Trigger: CAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000139204.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACATGTCAATCAGGTCTaGTCGCAAGGCATGAATGAC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHVNQV*SQGMND
Trigger: GTCATTCATGCCTTGCGACCAGACCTGATTGACATG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAACAGGAGGCACAGCTaGCAGGCTCTTCTCGGCATT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSNRRHS*QALLGI
Trigger: AATGCCGAGAAGAGCCTGCCAGCTGTGCCTCCTGTT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCCATCCTTGAATCGTaGGAGAGAGCCAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPAILES*ERASYF
Trigger: AAAATAGCTGGCTCTCTCCCACGATTCAAGGATGGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCTACAACTTCTAAATaGTCGCTGAATTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSTTSK*SLNSSL
Trigger: CAAAGAAGAATTCAGCGACCATTTAGAAGTTGTAGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAACTTCCCGCTCATCTTaGGCGTTTTGCATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLTSRSS*AFCMLS
Trigger: AGAAAGCATGCAAAACGCCCAAGATGAGCGGGAAGT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACATCACGCAAGCGTTTaGATTTTTCAATTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQHHASV*IFQFSE
Trigger: TTCAGAAAATTGAAAAATCCAAACGCTTGCGTGATG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCTTCGGGAATGTTCTaGATACTCCTGACACGCTGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPSGMF*ILLTRC
Trigger: ACAGCGTGTCAGGAGTATCCAGAACATTCCCGAAGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTGGCAGGAAAGACATaGAGTTTGTTCTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLAGKT*SLFCSA
Trigger: AGCTGAGCAGAACAAACTCCATGTCTTTCCTGCCAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCTCTTCAAGTTGGGTaGTGTAAGCTTGCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPALQVG*CKLAVR
Trigger: ACGAACTGCAAGCTTACACCACCCAACTTGAAGAGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTGCCTCTTTCAGGTaGAGAAGTTGGTTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSASFR*RSWFPV
Trigger: TACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATGGAATATGTGAGTTaGGTTGTCCTCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPMEYVS*VVLMVA
Trigger: GGCCACCATGAGGACAACCCAACTCACATATTCCAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAATGGAATATGTGAGTTaGGTTGTCCTCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGMEYVS*VVLMVA
Trigger: GGCCACCATGAGGACAACCCAACTCACATATTCCAT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGTCTCCAGACAGATTaGTGTTGGCAAGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCLQTD*CWQAVG
Trigger: TCCAACAGCTTGCCAACACCAATCTGTCTGGAGACA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGTCTCCAGACAGATTaGTGTTGGCAAGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCLQTD*CWQAVG
Trigger: TCCAACAGCTTGCCAACACCAATCTGTCTGGAGACA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGAATTCTCTCGTTTCTaGGCTGGGTGTGTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGEFSRF*AGCVPQ
Trigger: TTGCGGAACACACCCAGCCCAGAAACGAGAGAATTC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGTCTGTGCAAAAGCTaGATCTGCTCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCLCKS*ICSFRT
Trigger: GGTTCTGAAGGAGCAGATCCAGCTTTTGCACAGACA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGTCTGTGCAAAAGCTaGATCTGCTCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCLCKS*ICSFRT
Trigger: GGTTCTGAAGGAGCAGATCCAGCTTTTGCACAGACA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGTCTGTGCAAAAGCTaGATCTGCTCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCLCKS*ICSFRT
Trigger: GGTTCTGAAGGAGCAGATCCAGCTTTTGCACAGACA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCAGCAAGCCTCTTCTaGATCTCCTGGTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSASLF*ISWLSQ
Trigger: CTGCGATAACCAGGAGATCCAGAAGAGGCTTGCTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACACTCCGTTTCATTaGCACAGGCATCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHTPFH*HRHQSH
Trigger: ATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACACACTCCGTTTCATTaGCACAGGCATCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLHTPFH*HRHQSH
Trigger: ATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCAAACACGATGAGCTaGTCGATCTTGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPNTMS*SILLVF
Trigger: GAACACCAACAAGATCGACCAGCTCATCGTGTTTGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCAAACACGATGAGCTaGTCGATCTTGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPNTMS*SILLVF
Trigger: GAACACCAACAAGATCGACCAGCTCATCGTGTTTGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAGCCTGGATCTCCCTaGGGTCTTCTATGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQPGSP*GLLCPS
Trigger: AGACGGACATAGAAGACCCCAGGGAGATCCAGGCTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGVCSDA*NGKGCQ
Trigger: CTGACAGCCCTTCCCATTCCAAGCATCACTACAAAC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVCSDA*NGKGCQ
Trigger: CTGACAGCCCTTCCCATTCCAAGCATCACTACAAAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVCSDA*NGKGCQ
Trigger: CTGACAGCCCTTCCCATTCCAAGCATCACTACAAAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLSAIS*MSEGGS
Trigger: CGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGGCTTCGGGGCTCTaGCTTGGCAGATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVASGL*LGRYSL
Trigger: CAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTATTTTGGAGTTCTGTaGCTTCGGGGCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGYFGVL*LRGSGL
Trigger: CAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCTTCACCAGAAGGCTaGAGGAAATCTCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPSPEG*RKSPAR
Trigger: CCTTGCGGGAGATTTCCTCCAGCCTTCTGGTGAAGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCGAGCTTCTCAATATaGAAGTGCAGGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGASFSI*KCRMMV
Trigger: GACCATCATCCTGCACTTTCATATTGAGAAGCTCGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCTTGGATCTTTGCCTaGAGGCCAGCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSWIFA*RPALRT
Trigger: TGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTCTTCAATTCTTGTTaGTCCTCTGGTGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLFNSC*SSGDVS
Trigger: GCTGACATCACCAGAGGATCAACAAGAATTGAAGAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATGCCCTCTTCCTTCTaGATCAAAGCTGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPMPSSF*IKAVKL
Trigger: CAACTTGACAGCTTTGATTCAGAAGGAAGAGGGCAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGACAGAGGACTCCATaGCCTGCAGTTCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGQRTP*PAVQVV
Trigger: AACCACTTGAACTGCAGGTCATGGAGTCCTCTGTCC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTTCCTCAAGCTTTGTaGAGATCTCCAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFPQAL*RSPGYQ
Trigger: CTGATAGCCTGGAGATCTTCACAAAGCTTGAGGAAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCCCAGTTCTCTTCTTaGTTAGTCAGCCACTTACTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPQFSS*LVSHLL
Trigger: AAGTAAGTGGCTGACTAATCAAGAAGAGAACTGGGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTGCACTTTCTGATCTaGGAAAGGATGTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLHFLI*ERMLSG
Trigger: CCCTGACAACATCCTTTCTCAGATCAGAAAGTGCAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCTGGAGAGCCTCTTaGAGCCTAGAATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFWRAS*SLEFSS
Trigger: AGAAGAGAATTCTAGGCTTCAAGAGGCTCTCCAGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCTGGAGAGCCTCTTaGAGCCTAGAATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFWRAS*SLEFSS
Trigger: AGAAGAGAATTCTAGGCTTCAAGAGGCTCTCCAGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACCATCTCCATTTTCCTaGGCCGAGAGCAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGPSPFS*AESKFL
Trigger: AAGAAATTTGCTCTCGGCTCAGGAAAATGGAGATGG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTATTTTCCTCCTCATaGTGCTTGATGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLFSSS*CLMVSS
Trigger: AGAGCTCACCATCAAGCATCATGAGGAGGAAAATAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTATTTTCCTCCTCATaGTGCTTGATGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLFSSS*CLMVSS
Trigger: AGAGCTCACCATCAAGCATCATGAGGAGGAAAATAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCACTGAACTTCTCCTaGAGCACCATCTGGACCTTT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSLNFS*STIWTF
Trigger: AAAGGTCCAGATGGTGCTTCAGGAGAAGTTCAGTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCACACTCTCCAGGCTaGCTGTCAGAGCATCAATAC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAHSPG*LSEHQY
Trigger: GTATTGATGCTCTGACAGTCAGCCTGGAGAGTGTGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGAGGAAGGGGCTGCTaGGTTCTAAGTATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRGRGC*VLSIWL
Trigger: GAGCCAGATACTTAGAACTCAGCAGCCCCTTCCTCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGTCCTGGGACACGTTaGGGGATTGTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGPGTR*GIVLSS
Trigger: ACTGGAAAGAACAATCCCTCAACGTGTCCCAGGACC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGTCTATGTTGCTTCTaGTTGTATTCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCLCCF*LYSGPG
Trigger: CCCAGGACCTGAATACAATCAGAAGCAACATAGACA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACACAATAAGGTCTTTTaGATATGCCAGCCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHNKVF*ICQPVC
Trigger: ACAGACCGGCTGGCATATTCAAAAGACCTTATTGTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACAATAAGGTCTTTTaGATATGCCAGCCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHNKVF*ICQPVC
Trigger: ACAGACCGGCTGGCATATTCAAAAGACCTTATTGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACACAATAAGGTCTTTTaGATATGCCAGCCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLHNKVF*ICQPVC
Trigger: ACAGACCGGCTGGCATATTCAAAAGACCTTATTGTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTTCCTGAAGCCTGCTaGTTTGTCCGTCTACGAATT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFPEAC*FVRLRI
Trigger: AATTCGTAGACGGACAAATCAGCAGGCTTCAGGAAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTTCCTGAAGCCTGCTaGTTTGTCCGTCTACGAATT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFPEAC*FVRLRI
Trigger: AATTCGTAGACGGACAAATCAGCAGGCTTCAGGAAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCTTCCAGCTTTCCTaGAGCCTGCTGATTTGTCCG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSFQLS*SLLICP
Trigger: CGGACAAATCAGCAGGCTTCAGGAAAGCTGGAAGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACACGATCCACGAATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTRSTN*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATTCGTGGATCGTGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAACACGATCCACGAATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLTRSTN*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATTCGTGGATCGTGT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CTTCTGAATGAGCTGCTCCCCAAACACGATGAGCTGGTCGATCTTGTTGGTGTTTGTCTAACTGCTGAATaGAAGCAAACGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLNELLPKHDELVDLVGVCLTAE*KQTSPS
Trigger: TGAAGGAGACGTTTGCTTTCATTCAGCAGTTAGACA...AACACCAACAAGATCGACCAGCTCATCGTGTTTGGGGAGCAGCTCATTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTTTGTTGGATCTGTaGCTCATGCTGTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSLLDL*LMLSMS
Trigger: TGACATGGACAGCATGAGGCACAGATCCAACAAAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTTTGTTGGATCTGTaGCTCATGCTGTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSLLDL*LMLSMS
Trigger: TGACATGGACAGCATGAGGCACAGATCCAACAAAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGGAATCTCTTCTCTTaGAGAGTTAGCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPWNLFS*RVSQTR
Trigger: TCTGGTCTGGCTAACTCTGCAAGAGAAGAGATTCCA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCGTCTTCTACTTCCTaGTTTTCCGCAGCCTTTACA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSSSTS*FSAAFT
Trigger: TGTAAAGGCTGCGGAAAAGCAGGAAGTAGAAGACGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCCCAGATTGTCACCTaGTTGATGAGTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSQIVT*LMSPST
Trigger: AGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCACTTAGAGAGGCGCTaGAATCCTTTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGHLERR*NPFLPS
Trigger: AGAAGGAAGGAAAGGATTGCAGCGCCTCTCTAAGTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTACAGAATCCTGGAGCTaGTGGAGAAGGCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSTESWS*WRRLSC
Trigger: GCATGAGAGCCTTCTCCAGCAGCTCCAGGATTCTGT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTTTGGTTGAGATGCTaGGACTGTTCCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVWLRC*DCSRSS
Trigger: TGAACTTCTGGAACAGTCGCAGCATCTCAACCAAAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCAGCTACGGAGGATTaGAGTTCCTCTTGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSATED*SSSCLR
Trigger: CCTTAAACAAGAGGAACTGCAATCCTCCGTAGCTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCAGCTACGGAGGATTaGAGTTCCTCTTGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSATED*SSSCLR
Trigger: CCTTAAACAAGAGGAACTGCAATCCTCCGTAGCTGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCCTCGGTGGGAGCTaGGTTTGTTTTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFLGGS*VCFGNF
Trigger: GAAATTTCCAAAACAAACGCAGCTCCCACCGAGGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTCGAAACTCAGCTTaGCTTTCTGAAGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSRNSA*LSEECS
Trigger: GGAGCATTCTTCAGAAAGGCAAGCTGAGTTTCGAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCTCGAAACTCAGCTTaGCTTTCTGAAGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSRNSA*LSEECS
Trigger: GGAGCATTCTTCAGAAAGGCAAGCTGAGTTTCGAGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCTCCGCAGGGACTATaGTGTACATCTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSPQGL*CTSRNT
Trigger: AGTATTCCGAGATGTACAGCATAGTCCCTGCGGAGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGTATGACCTCCCCATaGTTGAGATGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSMTSP*LRCSSG
Trigger: ACCTGAAGAACATCTCAAGCATGGGGAGGTCATACT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGAGTTCTGCAGCTCTaGTGTATGCACATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRVLQL*CMHICF
Trigger: AAAGCAGATGTGCATACAGCAGAGCTGCAGAACTCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGAGTTCTGCAGCTCTaGTGTATGCACATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRVLQL*CMHICF
Trigger: AAAGCAGATGTGCATACAGCAGAGCTGCAGAACTCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCTTGTAACTGGGCCTaGAAAGCAGCTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSCNWA*KAALLL
Trigger: CAAGAGCAAAGCTGCTTTGCAGGCCCAGTTACAAGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGGCAAAGCCGGGCATaGTTCCCATCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGWQSRA*FPSMFL
Trigger: AAGAAACATTGATGGGAAGCATGCCCGGCTTTGCCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATAAGACCGCAGGCTTaGTGTGCTCCATGGAATATG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGIRPQA*CAPWNM
Trigger: CATATTCCATGGAGCACAGCAAGCCTGCGGTCTTAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTTCGTGAATCTGCCGCTGAAAGGCCTCAAACCGTTTCAGCTCCTCTTTGGCATACCAGGTACGAAGGTTaGTCATGTTTTTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: VRESAAERPQTVSAPLWHTRYEG*SCFCLT
Trigger: AGTTAGACAAAAACATGAGCAACCTTCGTACCTGGT...ATGCCAAAGAGGAGCTGAAACGGTTTGAGGCCTTTCAGCGGCAGATTCACGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGAATGCTCTCCCTGGTaGCCTCAAACTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSECSPW*PQTLPS
Trigger: AGAGGGAAGAGTTTGAGGGCACCAGGGAGAGCATTC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGAAGATAGTTTCCCTTaGATCAGAGTCCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGEDSFP*IRVLAS
Trigger: TGAAGCCAGGACTCTGATCCAAGGGAAACTATCTTC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAATAAGTCTCTCTCCTaGTTAAGCACAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLNKSLS*LSTGFS
Trigger: GGAGAAGCCTGTGCTTAACCAGGAGAGAGACTTATT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCGATGCTTCACGGCTaGAGCAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPMLHG*SSRILK
Trigger: CTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCTACAACTTCTAAATaGTCGCTGAATTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSTTSK*SLNSSL
Trigger: CAAAGAAGAATTCAGCGACCATTTAGAAGTTGTAGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGACCTGCAGTTCAAGTaGTTTCTCATTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLDLQFK*FLIALK
Trigger: CTTCAGAGCAATGAGAAACCACTTGAACTGCAGGTC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCTTCACGTGTGCTTTaGGTAAGAGCATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPSRVL*VRASSH
Trigger: ATGTGAAGATGCTCTTACCCAAAGCACACGTGAAGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACTTCCCGCTCATCTTaGGCGTTTTGCATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTSRSS*AFCMLS
Trigger: AGAAAGCATGCAAAACGCCCAAGATGAGCGGGAAGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCTTGCTCTTCTGTTTaGTTGAGATGCTGCGACTGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGACSSV*LRCCDC
Trigger: ACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGCCAGCAAACAACTaGTCTTTTCTATCCACACCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWPANN*SFLSTP
Trigger: AGGTGTGGATAGAAAAGACCAGTTGTTTGCTGGCCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTATTCTGGTAGCAACGTaGCTTCCTTGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSILVAT*LPCQAK
Trigger: CTTGGCCTGGCAAGGAAGCCACGTTGCTACCAGAAT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGATTTCAGGGCAAGCTaGTTTTCTATATCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLDFRAS*FSISWQ
Trigger: CTGCCAGGATATAGAAAACCAGCTTGCCCTGAAATC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGATTTCAGGGCAAGCTaGTTTTCTATATCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPDFRAS*FSISWQ
Trigger: CTGCCAGGATATAGAAAACCAGCTTGCCCTGAAATC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATGGAATATGTGAGTTaGGTTGTCCTCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGMEYVS*VVLMVA
Trigger: GGCCACCATGAGGACAACCCAACTCACATATTCCAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGTCTGTGCAAAAGCTaGATCTGCTCCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCLCKS*ICSFRT
Trigger: GGTTCTGAAGGAGCAGATCCAGCTTTTGCACAGACA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACTTTGTTTTCCATCTaGACCAGCCAAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTLFSI*TSQAHS
Trigger: ACTGTGTGCTTGGCTGGTCCAGATGGAAAACAAAGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCAAACTCTTCCCTCTaGTTGGTGAAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSNSSL*LVKYLS
Trigger: ACTCAGGTACTTCACCAACCAGAGGGAAGAGTTTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCAAACTCTTCCCTCTaGTTGGTGAAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSNSSL*LVKYLS
Trigger: ACTCAGGTACTTCACCAACCAGAGGGAAGAGTTTGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGAAGTGTTCTACGTTaGTCAGCTGCAGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRSVLR*SAAGPF
Trigger: AAATGGACCTGCAGCTGACCAACGTAGAACACTTCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCAAACACGATGAGCTaGTCGATCTTGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPNTMS*SILLVF
Trigger: GAACACCAACAAGATCGACCAGCTCATCGTGTTTGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGVCSDA*NGKGCQ
Trigger: CTGACAGCCCTTCCCATTCCAAGCATCACTACAAAC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTCGGGGCTCTGGCTTaGCAGATATTCCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFGALA*QIFLVA
Trigger: AGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACCTCATCAAAGCTaGTTAGAGAAGCATCCGGAT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPPHQS*LEKHPD
Trigger: ATCCGGATGCTTCTCTAACCAGCTTTGATGAGGTGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCGCTGAGAGCAAAATaGTGTAAGACAGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPALRAK*CKTVVK
Trigger: CTTGACAACTGTCTTACACCATTTTGCTCTCAGCGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
3UTR CAA 72 bp CTGGTAACTTTATCTGAATGCCAGGTCCTGCTGTGCTaGATTCTCTGTTCCAGCAGAAGGACATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVTLSECQVLLC*ILCSSRRTSCL
Trigger: CAGACAAGATGTCCTTCTGCTGGAACAGAGAATCAAGCACAGCAGGACCTGGCATTCAGATAAAGTTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGGCATGTTCTATGTTaGTTCTGCACTGGAATGTAT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGHVLC*FCTGMY
Trigger: ATACATTCCAGTGCAGAATCAACATAGAACATGCCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTAGGTCTCACTTGCTaGGTCCTTCAGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVGLTC*VLQHLL
Trigger: CAGAAGATGCTGAAGGACTCAGCAAGTGAGACCTAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGTTCAAAACACTCCTaGAGATTCGTTTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGSKHS*RFVLTL
Trigger: CAACGTCAAAACGAATCTTCAGGAGTGTTTTGAACC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAATCATTTCCACAGCTaGGTTCGTGTTTGTTTCCCG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGNHFHS*VRVCFP
Trigger: CGGGAAACAAACACGAACTCAGCTGTGGAAATGATT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACTCCATCTTCTGCTTaGGTTCGCTACCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTPSSA*VRYRCF
Trigger: AAAACAACGGTAGCGAACTCAAGCAGAAGATGGAGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCATCTCCATTTTCCTaGGCCGAGAGCAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPSPFS*AESKFL
Trigger: AAGAAATTTGCTCTCGGCTCAGGAAAATGGAGATGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGTCTTCTAGATCCGTaGAAATTGAATGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGLLDP*KLNVEG
Trigger: GCCTTCTACATTCAATTTTCACGGATCTAGAAGACC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGTCACTTAACTCGTaGATGGTCTGGATTAAGTCA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWSLNS*MVWIKS
Trigger: TGACTTAATCCAGACCATTCACGAGTTAAGTGACCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTTGCTGCTGGAAGCTaGTTGCCGATTTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLAAGS*LPICIF
Trigger: GAAGATGCAAATCGGCAATCAGCTTCCAGCAGCAAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAATACTTCCCTGTGTCTaGATAGTGTTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGILPCV*IVFASW
Trigger: CCAAGAAGCAAACACTATTCAGACACAGGGAAGTAT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGCACATCTGCTTTCTaGAGCTGTTTGCTAATACTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCTSAF*SCLLIL
Trigger: GAGTATTAGCAAACAGCTTCAGAAAGCAGATGTGCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTTGTTCGCCACCTCTaGAGATGGATCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVVRHL*RWISLL
Trigger: GAGCAAAGAGATCCATCTTCAGAGGTGGCGAACAAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGTCTAACTGCTGAATaGAAGCAAACGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCLTAE*KQTSPS
Trigger: TGAAGGAGACGTTTGCTTTCATTCAGCAGTTAGACA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGTCTAACTGCTGAATaGAAGCAAACGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPCLTAE*KQTSPS
Trigger: TGAAGGAGACGTTTGCTTTCATTCAGCAGTTAGACA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTCAGCGTCACTCTCTaGGAAGTGTTCTACGTTGGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLSVTL*EVFYVG
Trigger: ACCAACGTAGAACACTTCTCAGAGAGTGACGCTGAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCTCATCTTCCTGCTaGGCCTCCTTTAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCSSSC*ASFKPS
Trigger: AGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTACGTCACCCTGGATTTaGTGTCTTGCAGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSTSPWI*CLAGVA
Trigger: AGCAACACCTGCAAGACAGCAAATCCAGGGTGACGT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTACTCTCCCACAAGGCTaGTGTGTCTTCACACTGTTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSTLPQG*CVFTLL
Trigger: CAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCTCTTCCTAGTCAATaGTTGGGAAAACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPLPSQ*LGKQIH
Trigger: ATGGATCTGTTTTCCCAAGCATTGACTAGGAAGAGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACTCCAAGAGGTAATTaGCCTGAGATTTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTPRGN*PEILAP
Trigger: AGGAGCTAAAATCTCAGGGCAATTACCTCTTGGAGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGCTCCTGTAACTTCTaGATTCTCTCCTTAGCCATT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSSCNF*ILSLAI
Trigger: AATGGCTAAGGAGAGAATGCAGAAGTTACAGGAGCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGCTCCTGTAACTTCTaGATTCTCTCCTTAGCCATT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSSCNF*ILSLAI
Trigger: AATGGCTAAGGAGAGAATGCAGAAGTTACAGGAGCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAACTTCAGTTCTAGTTaGTGGGACCTCTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGNFSSS*WDLSVD
Trigger: ATCAACTGAGAGGTCCCAGCAACTAGAACTGAAGTT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTGTCTCCTACTTCTTaGTGTTCTTGTTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLSPTS*CSCFRC
Trigger: GCACCTGAAACAAGAACAGCAAGAAGTAGGAGACAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTGTCTCCTACTTCTTaGTGTTCTTGTTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLSPTS*CSCFRC
Trigger: GCACCTGAAACAAGAACAGCAAGAAGTAGGAGACAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTACATGGAGTTTGTTCTaGTCAGCTTCCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPTWSLF*SASFLK
Trigger: CTTCAGAAAGGAAGCTGAGCAGAACAAACTCCATGT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGCTGTATGCACATCTaGTTTCTGAAGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCCMHI*FLKLFA
Trigger: AGCAAACAGCTTCAGAAAGCAGATGTGCATACAGCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTCCGCAACTTGCTCTaGTCCAAATCCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFRNLL*SKSLSL
Trigger: AAGGGAGAGGGATTTGGAGCAGAGCAAGTTGCGGAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAGCCTTTCTTCCTGTaGCTCCAACCAGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQPFFL*LQPAVQ
Trigger: TTGAACAGCTGGTTGGAGGCACAGGAAGAAAGGCTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCAAAAGCTGGATCTaGTCCTTCAGAACCGTCACG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCKSWI*SFRTVT
Trigger: CGTGACGGTTCTGAAGGAGCAGATCCAGCTTTTGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCTCCCATTGTCTGTaGAAAAGCTGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSSHCL*KSWICS
Trigger: GGAGCAGATCCAGCTTTTGCACAGACAATGGGAGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCCATCTGCTTCAGCTaGAGTTTGTTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPICFS*SLFSVN
Trigger: ATTCACAGAAAACAAACTGCAGCTGAAGCAGATGGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGCTGGTCGCCCATCTaGTTCAGCTGCAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSWSPI*FSCSLF
Trigger: AAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACTTGCTCTTGCAGTTaGTTGAGTTTCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTCSCS*LSFFSI
Trigger: GATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAACTTGCTCTTGCAGTTaGTTGAGTTTCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPTCSCS*LSFFSI
Trigger: GATCGAGAAGAAACTCAAGCAACTGCAAGAGCAAGT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGACATCTACATCTTCTaGTTCCAGCAATTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPDIYIF*FQQFGD
Trigger: ATCCCCAAATTGCTGGAACCAGAAGATGTAGATGTC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTGAATTTTCACGAGTaGCAGTTTCAGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLNFHE*QFQKWS
Trigger: ACTCCACTTCTGAAACTGCCACTCGTGAAAATTCAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCTCTGAGGACATTTTaGAAGGGCTCCAGGTTCGAA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSALRTF*KGSRFE
Trigger: TTCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCTCAGTTTTGTTTCTaGTGGTTCAAAACACTCCTG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAQFCF*WFKTLL
Trigger: CAGGAGTGTTTTGAACCACCAGAAACAAAACTGAGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTCGGGCCTGGCATATaGACTCCATATTTTCTAATT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLGPGI*TPYFLI
Trigger: AATTAGAAAATATGGAGTCCATATGCCAGGCCCGAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTCCTAGTCAATGCTTaGGAAAACAGATCCATTCGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFLVNA*ENRSIR
Trigger: GCGAATGGATCTGTTTTCCCAAGCATTGACTAGGAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTTAGCATCTCCTTCTaGCTTCAAGGCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLSISF*LQGNDF
Trigger: GAAATCATTGCCTTGAAGCCAGAAGGAGATGCTAAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACGGCATCTCTTCAACTaGCAGAGAAAACTTTACATG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRHLFN*QRKLYM
Trigger: CATGTAAAGTTTTCTCTGCCAGTTGAAGAGATGCCG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTTCCAGAAGTTCAATaGCTGCTCTTCTTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVPEVQ*LLFLLL
Trigger: TAGAAGCAAGAAGAGCAGCCATTGAACTTCTGGAAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGCAGTGCTTGGTGTTaGCTCTGTAAATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSSAWC*LCKSSR
Trigger: CCTGGAGGATTTACAGAGCCAACACCAAGCACTGCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGAGCTGCGTTTGTTTTaGAAATTTCTGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPELRLF*KFLEGP
Trigger: AGGACCTTCCAGAAATTTCCAAAACAAACGCAGCTC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGGTTTTCTATATCCTaGCAGTCCAGTAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLWFSIS*QSSNSF
Trigger: GAAGCTGTTACTGGACTGCCAGGATATAGAAAACCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGTTTTCTATATCCTaGCAGTCCAGTAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWFSIS*QSSNSF
Trigger: GAAGCTGTTACTGGACTGCCAGGATATAGAAAACCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTTGGCAAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVLASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCAGACAGATTGGTGTTaGCAAGCTGTTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGQTDWC*QAVGTL
Trigger: CAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGAATTCTCTCGTTTCTaGGCTGGGTGTGTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSEFSRF*AGCVPQ
Trigger: TTGCGGAACACACCCAGCCCAGAAACGAGAGAATTC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACTTTGTTTTCCATCTaGACCAGCCAAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTLFSI*TSQAHS
Trigger: ACTGTGTGCTTGGCTGGTCCAGATGGAAAACAAAGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTATTTTGGAGTTCTGTaGCTTCGGGGCTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSYFGVL*LRGSGL
Trigger: CAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGGCATGTTCTATGTTaGTTCTGCACTGGAATGTAT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGHVLC*FCTGMY
Trigger: ATACATTCCAGTGCAGAATCAACATAGAACATGCCC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATGCTTTCTTCTTGCTaGGGCTTTAATTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPMLSSC*GFNSDV
Trigger: GACATCAGAATTAAAGCCTCAGCAAGAAGAAAGCAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTTCTTGCTTCTAAGTaGGTAGATAATTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLLASK*VDNSSI
Trigger: GATGGAGGAATTATCTACTCACTTAGAAGCAAGAAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCTTTTGGATTTCGTaGGCTTCCTCAATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFFWIS*ASSMFL
Trigger: CAGAAACATTGAGGAAGCTCACGAAATCCAAAAGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCTTTTGGATTTCGTaGGCTTCCTCAATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFFWIS*ASSMFL
Trigger: CAGAAACATTGAGGAAGCTCACGAAATCCAAAAGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGTTTCAGGTGCTCATaGAGGTTCAGTACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCFRCS*RFSTAV
Trigger: GACTGCTGTACTGAACCTTCATGAGCACCTGAAACA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCTTCATTCTCTTGGTaGCCCTGCAGCCATGTTTTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSSFSW*PCSHVF
Trigger: GAAAACATGGCTGCAGGGTCACCAAGAGAATGAAGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATACTTCCCTGTGTCTaGATAGTGTTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGILPCV*IVFASW
Trigger: CCAAGAAGCAAACACTATTCAGACACAGGGAAGTAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCATTTCTTCAATGCTaGCATCTGCTGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSFLQC*HLLSVE
Trigger: TTCTACAGACAGCAGATGTCAGCATTGAAGAAATGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGTCTAACTGCTGAATaGAAGCAAACGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCLTAE*KQTSPS
Trigger: TGAAGGAGACGTTTGCTTTCATTCAGCAGTTAGACA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCGTAATCTCGGAGTaGTCTCTTCAATTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFVISE*SLQFLL
Trigger: CAACAAGAATTGAAGAGAGCACTCCGAGATTACGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAAATCAGAAAGTTTTTaGAGCCTTTGTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLKSESF*SLCSRL
Trigger: GAGCCTGGAACAAAGGCTGCAAAAACTTTCTGATTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCACTCCAAGAGGTAATTaGCCTGAGATTTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGTPRGN*PEILAP
Trigger: AGGAGCTAAAATCTCAGGGCAATTACCTCTTGGAGT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCCCCTTTCTTAATCTaGAGATCCACAGCCCTTATC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAPFLI*RSTALI
Trigger: GATAAGGGCTGTGGATCTGCAGATTAAGAAAGGGGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAACCGAGACTGTATTTaGTTTAAAACATGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGNRDCI*FKTCRA
Trigger: CGCCCTACATGTTTTAAAGCAAATACAGTCTCGGTT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCACATTCAGCAGTCTaGTTTATGACAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSHSAV*FMTTFS
Trigger: ACTGAAGGTTGTCATAAAGCAGACTGCTGAATGTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCTTTCATAGCGCTTaGTTTCTACGTCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSFHSA*FLRHRC
Trigger: GCACCTGTGACGTAGAAAGCAAGCGCTATGAAAGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTATAAGACCGCAGGCTTaGTGTGCTCCATGGAATATG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSIRPQA*CAPWNM
Trigger: CATATTCCATGGAGCACAGCAAGCCTGCGGTCTTAT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTGTCTTCAATCTCCTaGTTGCGGATAGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLSSIS*LRIATL
Trigger: AAGAGTGGCTATCCGCAAGCAGGAGATTGAAGACAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCCATCTGCTTCAGCTaGAGTTTGTTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGPICFS*SLFSVN
Trigger: ATTCACAGAAAACAAACTGCAGCTGAAGCAGATGGG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTACCAGGTACGAAGGTTaGTCATGTTTTTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPTRYEG*SCFCLT
Trigger: AGTTAGACAAAAACATGAGCAACCTTCGTACCTGGT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAGGCATCAGAGTCATaGAGAAGGACGTCACAGATA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQASES*RRTSQI
Trigger: TATCTGTGACGTCCTTCTGCATGACTCTGATGCCTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTTTGCTGTCATCGGTaGCTTGACGTAATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLCCHR*LDVIAA
Trigger: AGCTGCTATTACGTCAAGGCACCGATGACAGCAAAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCAGATTGTCTTTGTTaGATCTGTGCCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSDCLC*ICASCC
Trigger: ACAGCATGAGGCACAGATCCAACAAAGACAATCTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGGCAGTTTCAGAAGTaGAGTTTTGGTGATGAACTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPWQFQK*SFGDEL
Trigger: AAGTTCATCACCAAAACTCCACTTCTGAAACTGCCA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGAGCTCGAGATTTTTaGAACTACAAGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRARDF*NYKLPV
Trigger: TACTGGAAGCTTGTAGTTCCAAAAATCTCGAGCTCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGAGCTCGAGATTTTTaGAACTACAAGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRARDF*NYKLPV
Trigger: TACTGGAAGCTTGTAGTTCCAAAAATCTCGAGCTCT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGTTTTGTTTCTGGTaGTTCAAAACACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQFCFW*FKTLLK
Trigger: CTTCAGGAGTGTTTTGAACCACCAGAAACAAAACTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGTCTCATTACCATCTaGATCTTAGCATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCLITI*ILASPS
Trigger: AGAAGGAGATGCTAAGATCCAGATGGTAATGAGACA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAAGGATGTCAAATCTTaGGCTTTCTGGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPKDVKS*AFWRNF
Trigger: GAAATTCCTCCAGAAAGCCCAAGATTTGACATCCTT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTTCAGTCTCCTGCTTaGCAGATTCGATTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFQSPA*QIRFCF
Trigger: AAAACAGAATCGAATCTGCCAAGCAGGAGACTGAAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTTAAAAGCAGTGCTTaGTGTTGGCTCTGTAAATCC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFKSSA*CWLCKS
Trigger: GGATTTACAGAGCCAACACCAAGCACTGCTTTTAAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTTAAAAGCAGTGCTTaGTGTTGGCTCTGTAAATCC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFKSSA*CWLCKS
Trigger: GGATTTACAGAGCCAACACCAAGCACTGCTTTTAAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTTCTCTTGTATGTCTaGAAGCTGAGTTATGAGCAC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFLLYV*KLSYEH
Trigger: GTGCTCATAACTCAGCTTCCAGACATACAAGAGAAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTTCTCTTGTATGTCTaGAAGCTGAGTTATGAGCAC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFLLYV*KLSYEH
Trigger: GTGCTCATAACTCAGCTTCCAGACATACAAGAGAAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTTCTCTTGTATGTCTaGAAGCTGAGTTATGAGCAC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFLLYV*KLSYEH
Trigger: GTGCTCATAACTCAGCTTCCAGACATACAAGAGAAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCACACTCCGTTTCATTaGCACAGGCATCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSHTPFH*HRHQSH
Trigger: ATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTTTCAGCTCCTCTTTaGCATTTGTATACAACACCT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVSAPL*HLYTTP
Trigger: AGGTGTTGTATACAAATGCCAAAGAGGAGCTGAAAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTTTCAGCTCCTCTTTaGCATTTGTATACAACACCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVSAPL*HLYTTP
Trigger: AGGTGTTGTATACAAATGCCAAAGAGGAGCTGAAAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCAAACACGATGAGCTaGTCGATCTTGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPNTMS*SILLVF
Trigger: GAACACCAACAAGATCGACCAGCTCATCGTGTTTGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGTGACAGGACATCAATaGAGGATTCCTTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGVTGHQ*RIPFLH
Trigger: ATGAAGAAAAGGAATCCTTCATTGATGTCCTGTCAC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTTCCTCAAGCTTTGTaGAGATCTCCAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFPQAL*RSPGYQ
Trigger: CTGATAGCCTGGAGATCTTCACAAAGCTTGAGGAAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCCCAGTTCTCTTCTTaGTTAGTCAGCCACTTACTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPQFSS*LVSHLL
Trigger: AAGTAAGTGGCTGACTAATCAAGAAGAGAACTGGGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTATCCATTCGCTCTCCTaGTACTTCCATTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSIHSLS*YFHFSP
Trigger: TGGGGAAAAATGGAAGTATCAGGAGAGCGAATGGAT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTGCACTTTCTGATCTaGGAAAGGATGTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLHFLI*ERMLSG
Trigger: CCCTGACAACATCCTTTCTCAGATCAGAAAGTGCAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTTTGCTTAATTTCCTaGTTATCTCATCACGCAAGC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFCLIS*LSHHAS
Trigger: GCTTGCGTGATGAGATAATCAGGAAATTAAGCAAAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTTTGCTTAATTTCCTaGTTATCTCATCACGCAAGC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFCLIS*LSHHAS
Trigger: GCTTGCGTGATGAGATAATCAGGAAATTAAGCAAAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTTTGGGAAAGAAGTTaGGATTTGTTCAAATACACG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVWERS*DLFKYT
Trigger: CGTGTATTTGAACAAATCTCAACTTCTTTCCCAAAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTTTGGGAAAGAAGTTaGGATTTGTTCAAATACACG +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVWERS*DLFKYT
Trigger: CGTGTATTTGAACAAATCTCAACTTCTTTCCCAAAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAACTCATTTTGTTCCTaGGTCACATTTTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLNSFCS*VTFSKS
Trigger: ACTCTTGGAAAATGTGACTCAGGAACAAAATGAGTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCATTTCTTCAATGCTaGCATCTGCTGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSFLQC*HLLSVE
Trigger: TTCTACAGACAGCAGATGTCAGCATTGAAGAAATGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTTTTTGTCTAACTGCTaGATGAAAGCAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGFLSNC*MKANVS
Trigger: GGAGACGTTTGCTTTCATTCAGCAGTTAGACAAAAA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCTCCTGCTCAGCTTaGAGTGAAAAGTGTAGATCA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSSCSA*SEKCRS
Trigger: TGATCTACACTTTTCACTGCAAGCTGAGCAGGAGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGGAATCTCTTCTCTTaGAGAGTTAGCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSWNLFS*RVSQTR
Trigger: TCTGGTCTGGCTAACTCTGCAAGAGAAGAGATTCCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCTTTAGAAATAGATaGGGCAACTTCTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFFRNR*GNFSTA
Trigger: AGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCTTCTAGAAAATTCTaGACTTTGCTCTTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSSRKF*TLLFEY
Trigger: GTACTCGAAGAGCAAAGTGCAGAATTTTCTAGAAGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTTCTAGAAAATTCTaGACTTTGCTCTTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSSRKF*TLLFEY
Trigger: GTACTCGAAGAGCAAAGTGCAGAATTTTCTAGAAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTGAATCAAAGTTTGTaGATTGAGCAGAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLNQSL*IEQSAF
Trigger: GAAAGCACTCTGCTCAATGCACAAACTTTGATTCAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAACCGAGACTGTATTTaGTTTAAAACATGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGNRDCI*FKTCRA
Trigger: CGCCCTACATGTTTTAAAGCAAATACAGTCTCGGTT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTCCTCGGTGGGAGCTaGGTTTGTTTTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFLGGS*VCFGNF
Trigger: GAAATTTCCAAAACAAACGCAGCTCCCACCGAGGAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTTCCTCAATGTTTCTaGTTTTCTGTTGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLPQCF*FSVAAF
Trigger: AAATGCTGCAACAGAAAAGCAGAAACATTGAGGAAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTTCCTCAATGTTTCTaGTTTTCTGTTGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLPQCF*FSVAAF
Trigger: AAATGCTGCAACAGAAAAGCAGAAACATTGAGGAAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGTATGACCTCCCCATaGTTGAGATGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSMTSP*LRCSSG
Trigger: ACCTGAAGAACATCTCAAGCATGGGGAGGTCATACT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATGAAACTCCAGGAGTaGGATGAAGTTTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGMKLQE*DEVFTQ
Trigger: TTGGGTAAAAACTTCATCCCACTCCTGGAGTTTCAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCAGTTTTGTTTCTGGTaGTTCAAAACACTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGQFCFW*FKTLLK
Trigger: CTTCAGGAGTGTTTTGAACCACCAGAAACAAAACTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGTCTCATTACCATCTaGATCTTAGCATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCLITI*ILASPS
Trigger: AGAAGGAGATGCTAAGATCCAGATGGTAATGAGACA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCCTTAGCCATTATTTaGTCCTTAGATCCATCACAA +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSLAII*SLDPSQ
Trigger: TTGTGATGGATCTAAGGACCAAATAATGGCTAAGGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCCTTTATCCTGTTCTaGAGCTCACACTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSFILF*SSHFLI
Trigger: GATTAAAAAGTGTGAGCTCCAGAACAGGATAAAGGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCCTTTATCCTGTTCTaGAGCTCACACTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSFILF*SSHFLI
Trigger: GATTAAAAAGTGTGAGCTCCAGAACAGGATAAAGGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCACTAAGTCTTCTTTaGTTGACAGGAGATTTGATG +
Preference number: 4 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSLSLL*LTGDLM
Trigger: CATCAAATCTCCTGTCAACCAAAGAAGACTTAGTGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTCTTTTTCATGGGATaGATGTTTTCAAGTATGACC +
Preference number: 4 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVFFMG*MFSSMT
Trigger: GGTCATACTTGAAAACATCCATCCCATGAAAAAGAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGAAGTGTTCTACGTTaGTCAGCTGCAGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRSVLR*SAAGPF
Trigger: AAATGGACCTGCAGCTGACCAACGTAGAACACTTCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGGATTGAAAGGCCATaGGAACATCCGAATGATAGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSWIERP*EHPNDS
Trigger: ACTATCATTCGGATGTTCTCATGGCCTTTCAATCCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTATTGTCTGCACGAGTaGACATTCTTTTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSYCLHE*TFFSSI
Trigger: GATGCTGGAAAAGAATGTTCACTCGTGCAGACAATA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAAGTGGTTTCTCATTaGTCTGAAGCAACGACTGTA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQVVSH*SEATTV
Trigger: TACAGTCGTTGCTTCAGAGCAATGAGAAACCACTTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAACTTCAGTTCTAGTTaGTGGGACCTCTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSNFSSS*WDLSVD
Trigger: ATCAACTGAGAGGTCCCAGCAACTAGAACTGAAGTT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAAAAATGTGTCCAGCTaGTTAATTTTTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGKNVSS*LIFPST
Trigger: AGTGGAAGGAAAAATTAAGCAGCTGGACACATTTTT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCTGTATGCACATCTaGTTTCTGAAGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCCMHI*FLKLFA
Trigger: AGCAAACAGCTTCAGAAAGCAGATGTGCATACAGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTACCAGAAGATGCTTaGAAAGATTTTGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLPEDA*KDFVVI
Trigger: AATGACCACAAAATCTTTGCAAGCATCTTCTGGTAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCAGATTGTCTTTGTTaGATCTGTGCCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSDCLC*ICASCC
Trigger: ACAGCATGAGGCACAGATCCAACAAAGACAATCTGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTTCCAGAAGTTCAATaGCTGCTCTTCTTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVPEVQ*LLFLLL
Trigger: TAGAAGCAAGAAGAGCAGCCATTGAACTTCTGGAAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCATCACGCAAGCGTTTaGATTTTTCAATTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPHHASV*IFQFSE
Trigger: TTCAGAAAATTGAAAAATCCAAACGCTTGCGTGATG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCACTAAGTCTTCTTTaGTTGACAGGAGATTTGATG +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSLSLL*LTGDLM
Trigger: CATCAAATCTCCTGTCAACCAAAGAAGACTTAGTGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGAGCTGCGTTTGTTTTaGAAATTTCTGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSELRLF*KFLEGP
Trigger: AGGACCTTCCAGAAATTTCCAAAACAAACGCAGCTC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CCA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATTGGTCTGACAGCTTaGAGAATTCAGAGACAAATT +
Preference number: 4 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGIGLTA*RIQRQI
Trigger: AATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGGTTCGAAGGACTTTaGACATCCATCTGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRFEGL*TSICKV
Trigger: TACTTTACAGATGGATGTTCAAAGTCCTTCGAACCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTATGCTTTCTTCTTGCTaGGGCTTTAATTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSMLSSC*GFNSDV
Trigger: GACATCAGAATTAAAGCCTCAGCAAGAAGAAAGCAT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTTCTTGCTTCTAAGTaGGTAGATAATTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLLASK*VDNSSI
Trigger: GATGGAGGAATTATCTACTCACTTAGAAGCAAGAAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR TCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTTTTGTCTAACTGCTaGATGAAAGCAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFLSNC*MKANVS
Trigger: GGAGACGTTTGCTTTCATTCAGCAGTTAGACAAAAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTTCTGAAGCACTGCTaGTTTGTCATGGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFLKHC*FVMEFS
Trigger: AGAGAATTCCATGACAAAGCAGCAGTGCTTCAGAAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTACCAGGTACGAAGGTTaGTCATGTTTTTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSTRYEG*SCFCLT
Trigger: AGTTAGACAAAAACATGAGCAACCTTCGTACCTGGT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGATAGCTTTGATCTTTaGAACCTTTTTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSDSFDL*NLFLHC
Trigger: GCAATGGAGAAAAAGGTTGCAAAGATCAAAGCTATC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTCCTTCTCAAGGGATaGATAGTTATCATCAAATTC +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVLLKG*IVIIKF
Trigger: GAATTTGATGATAACTATGCATCCCTTGAGAAGGAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGATTTACCAGAAGATaGTTGCAAAGATTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGFTRR*LQRFCG
Trigger: ACCACAAAATCTTTGCAAGCATCTTCTGGTAAATCC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000132161.2
CDS-3UTR CCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTATTGGTCTGACAGCTTaGAGAATTCAGAGACAAATT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSIGLTA*RIQRQI
Trigger: AATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAAT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR GCA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAACCTTTTTCTCCATTaGTTTTACTTCAGACTCGAT +
Preference number: 4 (lower is better)
Translates to: TPLFMGLMSCATITVFHSNLFLH*FYFRLD
Trigger: ATCGAGTCTGAAGTAAAAGCAATGGAGAAAAAGGTT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp AAGGAGCGTCTCGGCTGGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGACCCGCTTCTGCAGATaGTCCCAGCGCTGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: KERLGWELPGLSRWGILLTRFCR*SQRWLP
Trigger: GGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGT...CAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS GCA 90 bp AGCCCGGGGTGTGGGAGGTCAGGCGGCGGTGGAAGCGAGACACTCTaGCGAACACCTCCTGACAGTAGCGGTGCAGCTCCTCTAGCTCGT +
Preference number: 5 (lower is better)
Translates to: SPGCGRSGGGGSETL*RTPPDSSGAAPLAR
Trigger: ACGAGCTAGAGGAGCTGCACCGCTACTGTCAGGAGGTGTTCGGCAGAGTGTCTCGCTTCCACCGCCGCCTGACCTCCCACACCCCGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp TTTCCCGGGCTCCTCCTGACTCGCCCACGGCTGCCGACTCCCGAGTaGGCTTGGGCACCTCAGAAGTGGCCGGCATCTCTTCAACTGGCA +
Preference number: 5 (lower is better)
Translates to: FPGLLLTRPRLPTPE*AWAPQKWPASLQLA
Trigger: TGCCAGTTGAAGAGATGCCGGCCACTTCTGAGGTGCCCAAGCCCACTCGGGAGTCGGCAGCCGTGGGCGAGTCAGGAGGAGCCCGGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GTGCGCTCTCCGTGTCTTGCAGCTGCTGCTGGGATGCCTTCAGGATaGCGAGGCGACGTTCCAGCTCGGCTTCCGTGGAGGCTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: VRSPCLAAAAGMPSG*RGDVPARLPWRLCP
Trigger: GGGACAGAGCCTCCACGGAAGCCGAGCTGGAACGTCGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CTTTCTGACACTCCAGGAGGACCTGGCGGTCGGCCTCTGGGCTGGTaGCATGCGCCTTCTGCCTGCGGCTCTCTGCTGTCGCTAGCCACA +
Preference number: 5 (lower is better)
Translates to: LSDTPGGPGGRPLGW*HAPSACGSLLSLAT
Trigger: TGTGGCTAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATGTCACCAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTGTCAGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp ATGGGCCGAGAGTGCGCTCTCCGTGTCTTGCAGCTGCTGCTGGGATaGCTTCAGGATGGCGAGGCGACGTTCCAGCTCGGCTTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: MGRECALRVLQLLLG*LQDGEATFQLGFRG
Trigger: TCCACGGAAGCCGAGCTGGAACGTCGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCACTCTCGGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GGGCTCCTCCTGACTCGCCCACGGCTGCCGACTCCCGAGTGGGCTTaGGCACCTCAGAAGTGGCCGGCATCTCTTCAACTGGCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: GLLLTRPRLPTPEWA*APQKWPASLQLAEK
Trigger: TTTCTCTGCCAGTTGAAGAGATGCCGGCCACTTCTGAGGTGCCCAAGCCCACTCGGGAGTCGGCAGCCGTGGGCGAGTCAGGAGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GCCAGACCGCTCATGTCCCAGAGCCGGAGGCACAAGGTGACACAGTaGCTGGGGAGATGTGGGCTCCTCGCTCTCTCTCCTCTTACGCCA +
Preference number: 5 (lower is better)
Translates to: ARPLMSQSRRHKVTQ*LGRCGLLALSPLTP
Trigger: TGGCGTAAGAGGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGCTCTGGGACATGAGCGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp TTCATTCTGGTAGCTGCGGCTGTGCTCAAGGCCGGCCTTCAGGGATaGGTCCCTCCAGGCAGCTCTGCTCTGCACACTCTCCAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: FILVAAAVLKAGLQG*VPPGSSALHTLQAD
Trigger: GTCAGCCTGGAGAGTGTGCAGAGCAGAGCTGCCTGGAGGGACGCATCCCTGAAGGCCGGCCTTGAGCACAGCCGCAGCTACCAGAATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GGGATGCCTTCAGGATGGCGAGGCGACGTTCCAGCTCGGCTTCCGTaGAGGCTCTGTCCCCCGTGGGCGACATCAGTGTTTCGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GMPSGWRGDVPARLP*RLCPPWATSVFRFL
Trigger: AAGAAAGCGAAACACTGATGTCGCCCACGGGGGACAGAGCCTCCACGGAAGCCGAGCTGGAACGTCGCCTCGCCATCCTGAAGGCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGCACCCTCGTCTGTTaGGCTGAGCCTCGGGGATGG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGTLVC*AEPRGW
Trigger: CCATCCCCGAGGCTCAGCCAAACAGACGAGGGTGCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCCAGCTCAGCCGCCTaGGCCTTGCTGCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSSSAA*ALLLAL
Trigger: CAAGGCCAGCAGCAAGGCCAAGGCGGCTGAGCTGGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp AAGGAGCGTCTCGGCTGGGAGCTGCCGGGGCTGTCGAGGTGGGGCATCCTGCTGTGGTGGTCTGCTGGATaGAGTCACACTCCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: KERLGWELPGLSRWGILLWWSAG*SHTPFH
Trigger: ATGAAACGGAGTGTGACTCAATCCAGCAGACCACCA...CAGCAGGATGCCCCACCTCGACAGCCCCGGCAGCTCCCAGCCGAGACGCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CAA 90 bp AACAGGCTGTCGGCCATGGCACTGCAGCTGGTGGAACCTTCTAGGTGGGAGGTGTTGTCCCAGCGCTGGTaGCCCTCGTGCACCATCTGC +
Preference number: 5 (lower is better)
Translates to: NRLSAMALQLVEPSRWEVLSQRW*PSCTIC
Trigger: GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAA...CACCTCCCACCTAGAAGGTTCCACCAGCTGCAGTGCCATGGCCGACAGCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS GCA 90 bp CCATCTGGGTCTTGGCCTGGTCCAGATCCTCTCTCAGCTCAGCTGTaGTCCCACTGGGCGCATAGCTGTTGGATCCCCCTGCGACATGTG +
Preference number: 5 (lower is better)
Translates to: PSGSWPGPDPLSAQL*SHWAHSCWIPLRHV
Trigger: CACATGTCGCAGGGGGATCCAACAGCTATGCGCCCAGTGGGAGCACAGCTGAGCTGAGAGAGGATCTGGACCAGGCCAAGACCCAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GTCTCATTCTCAGACGCCTCCTTCTCATCATCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGGAAGCGAGACACTCTGCCGAACACC +
Preference number: 5 (lower is better)
Translates to: VSFSDASFSSSKPGV*EVRRRWKRDTLPNT
Trigger: GGTGTTCGGCAGAGTGTCTCGCTTCCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGATGATGAGAAGGAGGCGTCTGAGAATGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp GTCCCAGAGCCGGAGGCACAAGGTGACACAGTGACTGGGGAGATGTaGGCTCCTCGCTCTCTCTCCTCTTACGCCAAGAGTCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VPEPEAQGDTVTGEM*APRSLSSYAKSQPG
Trigger: TCCAGGCTGACTCTTGGCGTAAGAGGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGCTCTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp CGGCCGCCAGGAGGCTGGATAAATGTGCCCACTCGGTGCGAAGCTTaGTCAGTGAGCCTTGCTGGTTTTCCACGGACCCCAGGAACTTCT +
Preference number: 5 (lower is better)
Translates to: RPPGGWINVPTRCEA*SVSLAGFPRTPGTS
Trigger: AGAAGTTCCTGGGGTCCGTGGAAAACCAGCAAGGCTCACTGAGCAAGCTTCGCACCGAGTGGGCACATTTATCCAGCCTCCTGGCGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CAGCTCCAGCTTGGCCACTTGGGTCTTGCAGACACGGAGGATGTCTaGAGGCCGAGGCCTACTTCTCTCCACGGTGGACTCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: QLQLGHLGLADTEDV*RPRPTSLHGGLKSS
Trigger: GGAGCTTTTGAGTCCACCGTGGAGAGAAGTAGGCCTCGGCCTGCAGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CGTTGGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTaGAGACACGGAGGATGTCTGCAGGCCGAGGCCTACTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RWLVAATAPAWPLGS*RHGGCLQAEAYFSP
Trigger: TGGAGAGAAGTAGGCCTCGGCCTGCAGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp GTCAGCATAGCCTGGCACCCCGCCAGCTCCTCTTCCACCACCTGTTaGATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: VSIAWHPASSSSTTC*MSASTVSGSKATLA
Trigger: AGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAACAGGTGGTGGAAGAGGAGCTGGCGGGGTGCCAGGCTATGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CAGCCTCGCGATCTGGCCCTCTGGCTCAGGACAGCTCACAGATGCTaGCAGCTGTCTGCCTTCATTCAAGGTTTGGCAAAGCCGGGCATG +
Preference number: 5 (lower is better)
Translates to: QPRDLALWLRTAHRC*QLSAFIQGLAKPGM
Trigger: CATGCCCGGCTTTGCCAAACCTTGAATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGTCCTGAGCCAGAGGGCCAGATCGCGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 90 bp TTCCAGCCTCGCGATCTGGCCCTCTGGCTCAGGACAGCTCACAGATaGTGCCAGCTGTCTGCCTTCATTCAAGGTTTGGCAAAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: FQPRDLALWLRTAHR*CQLSAFIQGLAKPG
Trigger: GCCCGGCTTTGCCAAACCTTGAATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGTCCTGAGCCAGAGGGCCAGATCGCGAGGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 90 bp AGTCGGTGGAGCTCCTGGTCGATTCTCTTGTTGAGGGACAGCCATTaGTCTTCCAGCCTCGCGATCTGGCCCTCTGGCTCAGGACAGCTC +
Preference number: 5 (lower is better)
Translates to: SRWSSWSILLLRDSH*SSSLAIWPSGSGQL
Trigger: GAGCTGTCCTGAGCCAGAGGGCCAGATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCTCCACCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp CACCAGGGCGCTCTCTTTGCCCGAGTAACTGCTCGGCTCTCAAGATaGAGACCTCCAGCTCCTTCTGCGCTTCCTCCACCTTTAGCCCCA +
Preference number: 5 (lower is better)
Translates to: HQGALFARVTARLSR*RPPAPSALPPPLAP
Trigger: TGGGGCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGCGCCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GCCAGCTGCTCCACAAGTTCCCACCCATGTTCAAGGTGCTTCATTTaGCTCTCCACCAGCTTCTGGTCTGCGGCCGCCAGGAGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: ASCSTSSHPCSRCFI*LSTSFWSAAARRLD
Trigger: ATCCAGCCTCCTGGCGGCCGCAGACCAGAAGCTGGTGGAGAGCCAAATGAAGCACCTTGAACATGGGTGGGAACTTGTGGAGCAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp AAGGCCACGTTGGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACTTaGGTCTTGCAGACACGGAGGATGTCTGCAGGCCGAGGCCTACTT +
Preference number: 5 (lower is better)
Translates to: KATLACCSHSSSLAT*VLQTRRMSAGRGLL
Trigger: AAGTAGGCCTCGGCCTGCAGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCCTTGCTGCTGGCCTaGATCAGCTGGTCGCCCATC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQALLLA*ISWSPI
Trigger: GATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCAGCCGCCTTGGCCTaGCTGCTGGCCTTGATCAGC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSAALA*LLALIS
Trigger: GCTGATCAAGGCCAGCAGCAAGGCCAAGGCGGCTGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCCAGCTCAGCCGCCTaGGCCTTGCTGCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSSSAA*ALLLAL
Trigger: CAAGGCCAGCAGCAAGGCCAAGGCGGCTGAGCTGGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCCGCAAGGAGCTGACTaGAGGCTGACGGGCTACCAA +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKPQGAD*RLTGYQ
Trigger: TTGGTAGCCCGTCAGCCTCAAGTCAGCTCCTTGCGG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp CGCACAGCACCCTCAAGACACCCACATGGTGTTCTAGCTGGCACTTaGTGCTTTCCGGAGACAAGCAAGCCTCGTGCTCCTTGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: RTAPSRHPHGVLAGT*CFPETSKPRAPCGG
Trigger: GCCTCCGCAAGGAGCACGAGGCTTGCTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGTGGGTGTCTTGAGGGTGCTGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GTCACAGGTGCTAATTCTCCCATCTGCATCCTGCACGATGGTGGCTaGGGAGGAGGAGGATGCCCCATCCCCTTCCAGGTCCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VTGANSPICILHDGG*GGGGCPIPFQVLAV
Trigger: CACAGCAAGGACCTGGAAGGGGATGGGGCATCCTCCTCCTCCTCAGCCACCATCGTGCAGGATGCAGATGGGAGAATTAGCACCTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CACTTCACAGTCTTGAGTTTCCAGGAAAGGGCCTCGGCCTCCTGCTaGGTGGTCCCACAGTCTCCCAGGCCCTGGTCTTTGCACGTCTCT +
Preference number: 5 (lower is better)
Translates to: HFTVLSFQERASASC*VVPQSPRPWSLHVS
Trigger: AGAGACGTGCAAAGACCAGGGCCTGGGAGACTGTGGGACCACTCAGCAGGAGGCCGAGGCCCTTTCCTGGAAACTCAAGACTGTGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CGGTATCCTTGCCCGCCGCCTGAGGCTCCACGGCGTTCATCCAGCTaGTCATCTCGGAGATTGCTTCTCGGGACGGCAATTTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RYPCPPPEAPRRSSS*SSRRLLLGTAISPS
Trigger: AGATGGAGAAATTGCCGTCCCGAGAAGCAATCTCCGAGATGATCAGCTGGATGAACGCCGTGGAGCCTCAGGCGGCGGGCAAGGATACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 90 bp CCAGAATGGAGCCCAGGGGTGCTGCGCTCCTCAGGCTGTGGCAGCTaGTCCGAGAGGGTAGAATTTTCCAGGAAGGCCTCTTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PEWSPGVLRSSGCGS*SERVEFSRKASLVF
Trigger: GAAGACCAAAGAGGCCTTCCTGGAAAATTCTACCCTCTCGGATCAGCTGCCACAGCCTGAGGAGCGCAGCACCCCTGGGCTCCATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TTCTCCCCGGCTTCCAAGGCCAGTGCGTACGTTGTTCGCCACCTCTaGAGATGGATCTCTTTGCTCTTCAGCTCGTGGACCAGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: FSPASKASAYVVRHL*RWISLLFSSWTRRL
Trigger: CAGGCGCCTGGTCCACGAGCTGAAGAGCAAAGAGATCCATCTTCAGAGGTGGCGAACAACGTACGCACTGGCCTTGGAAGCCGGGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TCAGACTTGAGCTGCTGCACGGTCTGTTTGAGCCTGAGCTTGCTGTaGAGCTCCTGCGCCTGGATCAGCTCCCACCTGTCGAAGGCACCT +
Preference number: 5 (lower is better)
Translates to: SDLSCCTVCLSLSLL*SSCAWISSHLSKAP
Trigger: AGGTGCCTTCGACAGGTGGGAGCTGATCCAGGCGCAGGAGCTTCACAGCAAGCTCAGGCTCAAACAGACCGTGCAGCAGCTCAAGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp TGCACCATGGAGCTGTCACAGGTGCTAATTCTCCCATCTGCATCCTaGACGATGGTGGCTGAGGAGGAGGAGGATGCCCCATCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: CTMELSQVLILPSAS*TMVAEEEEDAPSPS
Trigger: GGAAGGGGATGGGGCATCCTCCTCCTCCTCAGCCACCATCGTGCAGGATGCAGATGGGAGAATTAGCACCTGTGACAGCTCCATGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CAGACCTGGCACACTGCTCCTGAGCCCACTGCAGAAGAGCCTTCTTaGCAGACCACTGCCATCTTGCCTGAGCTTGAGCCTTGGAGCACT +
Preference number: 5 (lower is better)
Translates to: QTWHTAPEPTAEEPS*QTTAILPELEPWST
Trigger: AGTGCTCCAAGGCTCAAGCTCAGGCAAGATGGCAGTGGTCTGCCAAGAAGGCTCTTCTGCAGTGGGCTCAGGAGCAGTGTGCCAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 90 bp TCTAGCAGAGAGGCGACCTTGTACTCAATCTCTGTCAGCATAGCCTaGCACCCCGCCAGCTCCTCTTCCACCACCTGTTGCATGTCCGCG +
Preference number: 5 (lower is better)
Translates to: SSREATLYSISVSIA*HPASSSSTTCCMSA
Trigger: CGCGGACATGCAACAGGTGGTGGAAGAGGAGCTGGCGGGGTGCCAGGCTATGCTGACAGAGATTGAGTACAAGGTCGCCTCTCTGCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGCGCTCTCCGTGTCTaGCAGCTGCTGCTGGGATGC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDCALRV*QLLLGC
Trigger: GCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTGCCGAGCTGCTCTTaGGCATCCTGCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLPSCS*ASCSSS
Trigger: AGAGCTGGAGCAGGATGCCAAAGAGCAGCTCGGCAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGCCACAGCTCCAGCTaGGCCACTTGGGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSHSSS*ATWVLQ
Trigger: CTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGHVGL*QPQLQL
Trigger: AAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTGGTCTGCGAGGTCTaGGTTCACTTGGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLVCEV*VHLGPP
Trigger: AGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGTCCTCTCGGCCGACTaGAGCCAGTCCTCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDVLSAD*SQSSKR
Trigger: TCGCTTCGAGGACTGGCTCAAGTCGGCCGAGAGGAC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGCCGCCGGTACTGCTaGTTGATGAGCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSRRYC*LMSSSC
Trigger: ACAGCTGGAGCTCATCAACAAGCAGTACCGGCGGCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAACCATCTGCTTCAGCTaGCTGGCTGTGTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQTICFS*LAVSVR
Trigger: CCGCACCGACACAGCCAGCAAGCTGAAGCAGATGGT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTGTCCCAGCGCTGGTaGCCCTCGTGCACCATCTGC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLSQRW*PSCTIC
Trigger: GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACACCCGCTTCTGCAGATaGTCCCAGCGCTGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDTRFCR*SQRWLP
Trigger: GGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAGGATCGGGCAAAGTaGTTGGCCTGGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKDRAK*LAWVQL
Trigger: CAGCTGCACCCAGGCCAACAACTTTGCCCGATCCTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TGGAGCGTGCTGTCCCACTGGTTGCTGAGGTCCGTAAAGGTCTCTTaGGCCAGCGGGGCCTCACAGTGTTCCGCTTGTCTCATTACCATC +
Preference number: 5 (lower is better)
Translates to: WSVLSHWLLRSVKVS*ASGASQCSACLITI
Trigger: GATGGTAATGAGACAAGCGGAACACTGTGAGGCCCCGCTGGCTCAAGAGACCTTTACGGACCTCAGCAACCAGTGGGACAGCACGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CCGAGTAACTGCTCGGCTCTCAAGATGGAGACCTCCAGCTCCTTCTaGGCTTCCTCCACCTTTAGCCCCAGGTCTAGCTCCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: PSNCSALKMETSSSF*ASSTFSPRSSSSGS
Trigger: TGAACCACTGGAGCTAGACCTGGGGCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TTCTGGATACTCCTGACACGCTGTAGAAGCAGGGCCAGCAGCAGCTaGTGCTTCTCCACACTCTCCTGGTGCTGGCACAGAGAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: FWILLTRCRSRASSS*CFSTLSWCWHRESN
Trigger: GTTGGACTCTCTGTGCCAGCACCAGGAGAGTGTGGAGAAGCAGCAGCTGCTGCTGGCCCTGCTTCTACAGCGTGTCAGGAGTATCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp ATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTGCAGACACGG +
Preference number: 5 (lower is better)
Translates to: MSASTVSGSKATLAC*SHSSSLATWVLQTR
Trigger: CCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TCAAGGCCGGCCTTCAGGGATGCGTCCCTCCAGGCAGCTCTGCTCTaGACACTCTCCAGGCTGACTGTCAGAGCATCAATACATTCTGGT +
Preference number: 5 (lower is better)
Translates to: SRPAFRDASLQAALL*TLSRLTVRASIHSG
Trigger: ACCAGAATGTATTGATGCTCTGACAGTCAGCCTGGAGAGTGTGCAGAGCAGAGCTGCCTGGAGGGACGCATCCCTGAAGGCCGGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CCTGTTGCATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTaGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: PVACPRLQFLAQRPR*LVAATAPAWPLGSC
Trigger: GCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GATGTGGGCTCCTCGCTCTCTCTCCTCTTACGCCAAGAGTCAGCCTaGATCTCCCTGGGGTCTTCTATGTCCGTCTCATTCTCAGACGCC +
Preference number: 5 (lower is better)
Translates to: DVGSSLSLLLRQESA*ISLGSSMSVSFSDA
Trigger: GGCGTCTGAGAATGAGACGGACATAGAAGACCCCAGGGAGATCCAGGCTGACTCTTGGCGTAAGAGGAGAGAGAGCGAGGAGCCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGGTCGGCACCCCTTCTaGCACAACACCCTCTATGTC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQGRHPF*HNTLYV
Trigger: GACATAGAGGGTGTTGTGCAAGAAGGGGTGCCGACC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCGCCATCGTGTTCTaGACCCAGGACAGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSAIVF*TQDRVS
Trigger: GGAGACTCTGTCCTGGGTCAAGAACACGATGGCGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTGGCCACTTGGGTCTaGCAGACACGGAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLATWV*QTRRMS
Trigger: AGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTCCAGCTTGGCCACTaGGGTCTTGCAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLQLGH*GLADTE
Trigger: CTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGHVGL*QPQLQL
Trigger: AAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTTGAGGGACAGCCATaGCTCTTCCAGCCTCGCGAT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVEGQP*LFQPRD
Trigger: ATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCACCCCTGCACTGTGTaGTTCGATATCTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKHPCTV*FDISLQ
Trigger: CTGCAGCGAGATATCGAACAACACAGTGCAGGGGTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCCACTCCAAACTGCTTaGCAAAGGCTGCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKPLQTA*QRLLGA
Trigger: AGCTCCCAGCAGCCTTTGCAAAGCAGTTTGGAGTGG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143031.8
CDS TCA 90 bp CTTTACATCCTCACCACGGCTTCCACCAGGCTCTGCTGCCATAGCTaGCTCCTTAGACAGACTCGTTCCAGAACTGTTCCCAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LYILTTASTRLCCHS*LLRQTRSRTVPRGL
Trigger: CAGCCCCCTGGGAACAGTTCTGGAACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAGCCTGGTGGAAGCCGTGGTGAGGATGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TCCATCCATTCTTGCGCCTGTCCTGGGTCCTGCTCGACGAAGTCCTaGACTTCAGAGTCCAGCTCGTTCAGCTTGGAATGCCAGAGGTCG +
Preference number: 5 (lower is better)
Translates to: SIHSCACPGSCSTKS*TSESSSFSLECQRS
Trigger: CGACCTCTGGCATTCCAAGCTGAACGAGCTGGACTCTGAAGTTCAGGACTTCGTCGAGCAGGACCCAGGACAGGCGCAAGAATGGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CTTGAGCTTCTGCAGAAGATGTTTCACCTGAGACGCAGAACTCTTTaGGAGCTCGGTATCCTTGCCCGCCGCCTGAGGCTCCACGGCGTT +
Preference number: 5 (lower is better)
Translates to: LELLQKMFHLRRRTL*ELGILARRLRLHGV
Trigger: AACGCCGTGGAGCCTCAGGCGGCGGGCAAGGATACCGAGCTCTCAAAGAGTTCTGCGTCTCAGGTGAAACATCTTCTGCAGAAGCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 90 bp TACTTCAAGAGGAATCCACCAGGGCGCTCTCTTTGCCCGAGTAACTaGTCGGCTCTCAAGATGGAGACCTCCAGCTCCTTCTGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: YFKRNPPGRSLCPSN*SALKMETSSSFCAS
Trigger: GGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGCGCCCTGGTGGATTCCTCTTGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CCAGTAAGACCTGCAGTTCTGCCAGTTTACTCTGCAGGCAGGCGCTaGTCCTCTCCTGCTCACTGGCAAAGTCAGACGTCACCCTGGATT +
Preference number: 5 (lower is better)
Translates to: PVRPAVLPVYSAGRR*SSPAHWQSQTSPWI
Trigger: AATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGAACTGCAGGTCTTACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp ACCTGGCAGGCCAAGGCCTGCAACGATAAGACCGCAGGCTTGCTGTaGTCCATGGAATATGTGAGTTGGGTTGTCCTCATGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TWQAKACNDKTAGLL*SMEYVSWVVLMVAS
Trigger: TGAGGCCACCATGAGGACAACCCAACTCACATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATCGTTGCAGGCCTTGGCCTGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp ACTCTTAGGCAGAGGTCCTCCCATTGTCTGTGCAAAAGCTGGATCTaGTCCTTCAGAACCGTCACGTCCTCCGCCAGGATGTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TLRQRSSHCLCKSWI*SFRTVTSSARMCWL
Trigger: GAGCCAGCACATCCTGGCGGAGGACGTGACGGTTCTGAAGGAGCAGATCCAGCTTTTGCACAGACAATGGGAGGACCTCTGCCTAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp CTTGCAGAGTTAGCCAGACCAGAGCATCCCTTACCTTGGCCTGTGTaGAATCCCCGGGGCCAGGCGCATCCTTCGAATACTTCAGGAACT +
Preference number: 5 (lower is better)
Translates to: LAELARPEHPLPWPV*NPRGQAHPSNTSGT
Trigger: AGTTCCTGAAGTATTCGAAGGATGCGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAAGGGATGCTCTGGTCTGGCTAACTCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 90 bp AGGCGCTGCTCCTCTCCTGCTCACTGGCAAAGTCAGACGTCACCCTaGATTTGCTGTCTTGCAGGTGTTGCTCAAGAAGCCCCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: RRCSSPAHWQSQTSP*ICCLAGVAQEAPFV
Trigger: CACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CAGCTCCTCTTCCACCACCTGTTGCATGTCCGCGTCTACAGTTTCTaGCTCAAAGGCCACGTTGGCTTGTTGCAGCCACAGCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: QLLFHHLLHVRVYSF*LKGHVGLLQPQLQL
Trigger: AAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAACAGGTGGTGGAAGAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CTTCTGCAGGTCACTCTGCAGCCCCTTTATGTCCTTCAGGGCCCGTaGCAGGATATCTGCCAGGTTGTCTCCAGACAGATTGGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: LLQVTLQPLYVLQGP*QDICQVVSRQIGVG
Trigger: GCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACGGGCCCTGAAGGACATAAAGGGGCTGCAGAGTGACCTGCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp CTGGTGCCTCAGTCCTGTCACCTTCCATGTGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAGGAACATGCCACGGGTGGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LVPQSCHLPCVCSDA*NGKGCQEHATGGPQ
Trigger: CTGAGGGCCACCCGTGGCATGTTCCTGACAGCCCTTCCCATTCCAAGCATCACTACAAACACATGGAAGGTGACAGGACTGAGGCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp TCAGCTCCCACCTGTCGAAGGCACCTGGCTGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCTGCTGAGCCTCCTTTAAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SAPTCRRHLAAVPLK*PAAHLPAEPPLSLL
Trigger: AAGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGCAGCCAGGTGCCTTCGACAGGTGGGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCTTCCAGTAACTTCTaGTCCTCAGGAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKASSNF*SSGGPS
Trigger: GGAAGGACCTCCTGAGGACAAGAAGTTACTGGAAGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCCATGTAGGAAGCTaGCTGGGAGATGATGCCCTC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSHVGS*LGDDAL
Trigger: GAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGGCTTGCTCTTCTGTTaGGTTGAGATGCTGCGACTG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKGLLFC*VEMLRL
Trigger: CAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCCGCCATCGTGTTCTaGACCCAGGACAGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSAIVF*TQDRVS
Trigger: GGAGACTCTGTCCTGGGTCAAGAACACGATGGCGGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGAGGGGCAGGAAGCTTaGAGTCTGCCAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDEGQEA*SLPMTS
Trigger: GGAGGTCATTGGCAGACTCAAAGCTTCCTGCCCCTC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAAGCTGTTGGAACTTaGCTTCCTGCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQAVGT*LPAAAA
Trigger: GGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAGAGGTCCTCCCATaGTCTGTGCAAAAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKAEVLP*SVQKLD
Trigger: ATCCAGCTTTTGCACAGACAATGGGAGGACCTCTGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTAGAGAAGCATCCGACCATCTGCTTCAGCTaGCTGGCTGTGTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LGAVLLSPPHQSWLEKHPTICFS*LAVSVR
Trigger: CCGCACCGACACAGCCAGCAAGCTGAAGCAGATGGT...CGGATGCTTCTCTAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFSWRI*SSASLS
Trigger: AGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp CACTGGCAGGAAAGACATGGAGTTTGTTCTGCTCAGCTTCCTTTCTaGAGCATCCCTCTCGGCCACTGTACACTCGGAGGCGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HWQERHGVCSAQLPF*SIPLGHCTLGGACR
Trigger: TCTGCAGGCGCCTCCGAGTGTACAGTGGCCGAGAGGGATGCTTCAGAAAGGAAGCTGAGCAGAACAAACTCCATGTCTTTCCTGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CCTGAAGCACCATCTGGACCTTTTCCAAGTTGCACTTCACAGTCTTaGGTTTCCAGGAAAGGGCCTCGGCCTCCTGCTGAGTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: PEAPSGPFPSCTSQS*VSRKGPRPPAEWSH
Trigger: GTGGGACCACTCAGCAGGAGGCCGAGGCCCTTTCCTGGAAACTCAAGACTGTGAAGTGCAACTTGGAAAAGGTCCAGATGGTGCTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp AATGTTCCTCCAGCGCCTGTCCAGGCTCCTGGTGGTCTGCTGGATTaGGTCACACTCCGTTTCATTGGCACAGGCATCAGAGTCATGCAG +
Preference number: 5 (lower is better)
Translates to: NVPPAPVQAPGGLLD*VTLRFIGTGIRVMQ
Trigger: CTGCATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTGACTCAATCCAGCAGACCACCAGGAGCCTGGACAGGCGCTGGAGGAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS TCA 90 bp ACAGGAGCAAGTCTTGACTCAGCTGGTGAAAGTCCTGGCACTGCATaGGTGACTGCCGTAAGTCTCCTCGCCAGCTGTCCAATACGCCCT +
Preference number: 5 (lower is better)
Translates to: TGASLDSAGESPGTA*VTAVSLLASCPIRP
Trigger: AGGGCGTATTGGACAGCTGGCGAGGAGACTTACGGCAGTCACTCATGCAGTGCCAGGACTTTCACCAGCTGAGTCAAGACTTGCTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp CTTGCCCCTTCACCAGAAGGCTGGAGGAAATCTCCCGCAAGGAGCTaGCTTGAGGCTGACGGGCTACCAACTCCTTTTCTAGGCGCATTA +
Preference number: 5 (lower is better)
Translates to: LAPSPEGWRKSPARS*LEADGLPTPFLGAL
Trigger: TAATGCGCCTAGAAAAGGAGTTGGTAGCCCGTCAGCCTCAAGTCAGCTCCTTGCGGGAGATTTCCTCCAGCCTTCTGGTGAAGGGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp GAGATACAAAGAAATTTCATGACGGAGCGGCTCCCACTTGGCACTTaGGACTCGACTCTGTTCTTCCAGCTGCAGCTTCGCACCACCGGG +
Preference number: 5 (lower is better)
Translates to: EIQRNFMTERLPLGT*DSTLFFQLQLRTTG
Trigger: CCCGGTGGTGCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTTTGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AATGTCTTCACTCAGCACTTCTGGTGCTTTCGGGGCAGGACGGTCTaGAGGGAGCTCAGCAGAGAGCTTAGCTGCTCTCAGAGATGCCAA +
Preference number: 5 (lower is better)
Translates to: NVFTQHFWCFRGRTV*RELSRELSCSQRCQ
Trigger: TTGGCATCTCTGAGAGCAGCTAAGCTCTCTGCTGAGCTCCCTGCAGACCGTCCTGCCCCGAAAGCACCAGAAGTGCTGAGTGAAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CCCAAGTGGCACACTGAAGGTCTGGCGGCGGGCAGAACCAAGGCTTaGTCTTCTGTTTGGTTGAGATGCTGCGACTGTTCCAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: PKWHTEGLAAGRTKA*SSVWLRCCDCSRSS
Trigger: TGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCGCCAGACCTTCAGTGTGCCACTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CTGCTGTCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTaGTTTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: LLSVSSSSSSSSTPN*FAKAAGSCSPESTS
Trigger: TGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGCAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143031.8
CDS CCA 90 bp ATCTCTTCTCTTGCAGAGTTAGCCAGACCAGAGCATCCCTTACCTTaGCCTGTGTGGAATCCCCGGGGCCAGGCGCATCCTTCGAATACT +
Preference number: 5 (lower is better)
Translates to: ISSLAELARPEHPLP*PVWNPRGQAHPSNT
Trigger: AGTATTCGAAGGATGCGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAAGGGATGCTCTGGTCTGGCTAACTCTGCAAGAGAAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 90 bp CCAGAGCATCCAGGGCATCCTCCCTCATCTCTACCTTCTGGTTCATaGTCTCCAGCTGGAGTCTGCACTTCAGCACAATGTCCTGGATCG +
Preference number: 5 (lower is better)
Translates to: PEHPGHPPSSLPSGS*SPAGVCTSAQCPGS
Trigger: CGATCCAGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGAGGATGCCCTGGATGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGGGAGGTGTGTGCTTaGCCAGCTGTGAGTTTATCC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQREVCA*PAVSLS
Trigger: GGATAAACTCACAGCTGGCAAAGCACACACCTCCCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTCTCACTGCCATCCTaGAATCGTGGGAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFSLPS*NRGREP
Trigger: TGGCTCTCTCCCACGATTCAAGGATGGCAGTGAGAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTTGATGTTAGCGCCTaGCTCTGTTCCAGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDFDVSA*LCSRRA
Trigger: AGCGCGCCTGGAACAGAGCAAGGCGCTAACATCAAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAAAGGAGCCATCAAGTaGTCCATCCATTCTTGCGCC +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKKGAIK*SIHSCA
Trigger: GGCGCAAGAATGGATGGACAACTTGATGGCTCCTTT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCCCTTCCAGGTCCTaGCTGTGTTTCCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSPSRS*LCFPRK
Trigger: TTTTCTGGGGAAACACAGCAAGGACCTGGAAGGGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTCTTCCACCACCTGTaGCATGTCCGCGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLFHHL*HVRVYS
Trigger: ACTGTAGACGCGGACATGCAACAGGTGGTGGAAGAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTGCACTTCACAGTCTaGAGTTTCCAGGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLHFTV*SFQERA
Trigger: GGCCCTTTCCTGGAAACTCAAGACTGTGAAGTGCAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTGCATCTTCATTCTCTaGGTGACCCTGCAGCCATGT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKCIFIL*VTLQPC
Trigger: ACATGGCTGCAGGGTCACCAAGAGAATGAAGATGCA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCCTGCAAAGCAGCTTaGCTCTTGGCGTGTTGCAAA +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQACKAA*LLACCK
Trigger: TTTGCAACACGCCAAGAGCAAAGCTGCTTTGCAGGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCAGAGGTCCTCCCATaGTCTGTGCAAAAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQAEVLP*SVQKLD
Trigger: ATCCAGCTTTTGCACAGACAATGGGAGGACCTCTGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCCAGCTCAGCCGCCTaGGCCTTGCTGCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSSSAA*ALLLAL
Trigger: CAAGGCCAGCAGCAAGGCCAAGGCGGCTGAGCTGGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCCAGCTCAGCCGCCTaGGCCTTGCTGCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSSSAA*ALLLAL
Trigger: CAAGGCCAGCAGCAAGGCCAAGGCGGCTGAGCTGGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGAGAAGTGTTCTACGTaGGTCAGCTGCAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKEKCST*VSCRSI
Trigger: AATGGACCTGCAGCTGACCAACGTAGAACACTTCTC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTTGGCAGATATTCCTaGTGGCTCACATTGACGGAG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLGRYS*WLTLTE
Trigger: CTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTGATGGAGTCTATTTaGGAGTTCTGTGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLMESI*EFCGFG
Trigger: CCCGAAGCCACAGAACTCCAAAATAGACTCCATCAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKNVVFS*PLHQKA
Trigger: AGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAGATCTTGAGCCACTaGCTCTTGCAGTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQILSH*LLQLLE
Trigger: CTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp CAGGTGAGTTCGCTGTGTTCTGTGGCTTGCTGGAAACACTTCCTGTaGGCCAGCTGCTCCACAAGTTCCCACCCATGTTCAAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: QVSSLCSVACWKHFL*ASCSTSSHPCSRCF
Trigger: GAAGCACCTTGAACATGGGTGGGAACTTGTGGAGCAGCTGGCTCACAGGAAGTGTTTCCAGCAAGCCACAGAACACAGCGAACTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CCTTCTGCCATTCTCAGTTGTGATCAAGGCACTCCTCTCCTCCAATaGACCTCCCTGGGAGGACTGCAGGGTTGTGTGAATCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PSAILSCDQGTPLLQ*TSLGGLQGCVNLRS
Trigger: GCTTCTGAGATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGAGGAGTGCCTTGATCACAACTGAGAATGGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CAGCTCAGCTGTGCTCCCACTGGGCGCATAGCTGTTGGATCCCCCTaGGACATGTGTTTTCACATCTTTCATCTTGCTCAGGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: QLSCAPTGRIAVGSP*DMCFHIFHLAQDRG
Trigger: TCCTCTGTCCTGAGCAAGATGAAAGATGTGAAAACACATGTCGCAGGGGGATCCAACAGCTATGCGCCCAGTGGGAGCACAGCTGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TGCGTCCTTGTAGGCATTTGTAAGTTCTTGAAGATGGGCCGAGAGTaGGCTCTCCGTGTCTTGCAGCTGCTGCTGGGATGCCTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: CVLVGICKFLKMGRE*ALRVLQLLLGCLQD
Trigger: ATCCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCACTCTCGGCCCATCTTCAAGAACTTACAAATGCCTACAAGGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AGACTTCACTGCTCATCTTCTCCTCAGCATCCTCTAGGGCACTCCTaGATTCTTCCACCTGGGATCCGATCTCCGCAGGGACTATGCTGT +
Preference number: 5 (lower is better)
Translates to: RLHCSSSPQHPLGHS*ILPPGIRSPQGLCC
Trigger: ACAGCATAGTCCCTGCGGAGATCGGATCCCAGGTGGAAGAATGCAGGAGTGCCCTAGAGGATGCTGAGGAGAAGATGAGCAGTGAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CGCCTGAGGCTCCACGGCGTTCATCCAGCTGATCATCTCGGAGATTaGTTCTCGGGACGGCAATTTCTCCATCTGAAGCTGGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: RLRLHGVHPADHLGD*FSGRQFLHLKLVKF
Trigger: AAACTTCACCAGCTTCAGATGGAGAAATTGCCGTCCCGAGAAGCAATCTCCGAGATGATCAGCTGGATGAACGCCGTGGAGCCTCAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 90 bp ACTCTGCAGCCCCTTTATGTCCTTCAGGGCCCGTGGCAGGATATCTaGCAGGTTGTCTCCAGACAGATTGGTGTTGGCAAGCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: TLQPLYVLQGPWQDI*QVVSRQIGVGKLLE
Trigger: TTCCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACGGGCCCTGAAGGACATAAAGGGGCTGCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp AACCCTTCCAGAGCATCCAGGGCATCCTCCCTCATCTCTACCTTCTaGTTCATGGTCTCCAGCTGGAGTCTGCACTTCAGCACAATGTCC +
Preference number: 5 (lower is better)
Translates to: NPSRASRASSLISTF*FMVSSWSLHFSTMS
Trigger: GGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGAGGATGCCCTGGATGCTCTGGAAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GCGCCTTGCTCTGTTCCAGGCGCGCTAAGGCTTCTTTGTAAGACCTaGGCAACGGGAATATGGACTGTCCGAGATCCATCTCCATTTTCC +
Preference number: 5 (lower is better)
Translates to: APCSVPGALRLLCKT*ATGIWTVRDPSPFS
Trigger: GGAAAATGGAGATGGATCTCGGACAGTCCATATTCCCGTTGCCCAGGTCTTACAAAGAAGCCTTAGCGCGCCTGGAACAGAGCAAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GCTTTTACTTCAGACTCGATCGCAACCACATCATCTGCCACCTGCTaGACGTGTGGGAGGGCCTCCATTATCTGTTGCTGTAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: AFTSDSIATTSSATC*TCGRASIICCCKAA
Trigger: GGCCGCTTTACAGCAACAGATAATGGAGGCCCTCCCACACGTCCAGCAGGTGGCAGATGATGTGGTTGCGATCGAGTCTGAAGTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp TGTGCTAAAGAGGCTCTCAGTGTGGCCGTGTCTGCCTCTTTCAGGTaGAGAAGTTGGTTCCCAGTACTCATGACTGCGGACTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: CAKEALSVAVSASFR*RSWFPVLMTADFRE
Trigger: CTCCCTGAAGTCCGCAGTCATGAGTACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGACACGGCCACACTGAGAGCCTCTTTAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp TCTGAAGATGGATCTCTTTGCTCTTCAGCTCGTGGACCAGGCGCCTaGTTTGGCAGAGGCTGTAACAGTCCTGCTCCTTCACTGCAGACA +
Preference number: 5 (lower is better)
Translates to: SEDGSLCSSARGPGA*FGRGCNSPAPSLQT
Trigger: TGTCTGCAGTGAAGGAGCAGGACTGTTACAGCCTCTGCCAAACCAGGCGCCTGGTCCACGAGCTGAAGAGCAAAGAGATCCATCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGAGGACATGCCCCTTCTaGATGTCTGCGAATAAGTCA +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKRTCPF*MSANKS
Trigger: TGACTTATTCGCAGACATCAAGAAGGGGCATGTCCT...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCCATCTTGCCTGAGCTaGAGCCTTGGAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDPSCLS*SLGALL
Trigger: AAGAAGTGCTCCAAGGCTCAAGCTCAGGCAAGATGG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATTCCAGACATCCAACTaGGCCTTCGCTTCATCAAGC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQFQTSN*AFASSS
Trigger: GCTTGATGAAGCGAAGGCCAAGTTGGATGTCTGGAA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAGCTCTGAGGACATTTaGGAAGGGCTCCAGGTTCGA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSSEDI*EGLQVR
Trigger: TCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGCT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTCAGTTGACAGCTGGTaGTCTGGTATCTCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKSVDSW*SGISSG
Trigger: ACCACTTGAGATACCAGACAACCAGCTGTCAACTGA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCACATCTTTCATCTaGCTCAGGACAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFTSFI*LRTEDS
Trigger: GGAGTCCTCTGTCCTGAGCAAGATGAAAGATGTGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGCTTGCTCTTCTGTTaGGTTGAGATGCTGCGACTG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGLLFC*VEMLRL
Trigger: CAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGGCAGAACCAAGGCTaGCTCTTCTGTTTGGTTGAG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGQNQG*LFCLVE
Trigger: CTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCATCACCAGCTGGTCTaGAAAACCACTAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDHHQLV*KTTKEA
Trigger: GGCCTCCTTAGTGGTTTTCAAGACCAGCTGGTGATG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGCGCTCTCCGTGTCTaGCAGCTGCTGCTGGGATGC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCALRV*QLLLGC
Trigger: GCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAAAGGAGCCATCAAGTaGTCCATCCATTCTTGCGCC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQKGAIK*SIHSCA
Trigger: GGCGCAAGAATGGATGGACAACTTGATGGCTCCTTT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTGATCGTGGCCTTGTaGAGCTGCGAGGTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLIVAL*SCEVLD
Trigger: ATCCAGAACCTCGCAGCTCAACAAGGCCACGATCAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGCATCTTCATTCTCTaGGTGACCCTGCAGCCATGT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCIFIL*VTLQPC
Trigger: ACATGGCTGCAGGGTCACCAAGAGAATGAAGATGCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCCTGCAAAGCAGCTTaGCTCTTGGCGTGTTGCAAA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDACKAA*LLACCK
Trigger: TTTGCAACACGCCAAGAGCAAAGCTGCTTTGCAGGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGATAAGACCGCAGGCTaGCTGTGCTCCATGGAATAT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQDKTAG*LCSMEY
Trigger: ATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCCTTGCTGCTGGCCTaGATCAGCTGGTCGCCCATC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPALLLA*ISWSPI
Trigger: GATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCCTTGCTGCTGGCCTaGATCAGCTGGTCGCCCATC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLALLLA*ISWSPI
Trigger: GATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCCTTGCTGCTGGCCTaGATCAGCTGGTCGCCCATC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPALLLA*ISWSPI
Trigger: GATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCAGCCGCCTTGGCCTaGCTGCTGGCCTTGATCAGC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSAALA*LLALIS
Trigger: GCTGATCAAGGCCAGCAGCAAGGCCAAGGCGGCTGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCATGCGTCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSCVAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCAATGGAGCGACGCATGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTCCTCTCGGCCGACTaGAGCCAGTCCTCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVLSAD*SQSSKR
Trigger: TCGCTTCGAGGACTGGCTCAAGTCGGCCGAGAGGAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTCCTCTCGGCCGACTaGAGCCAGTCCTCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVLSAD*SQSSKR
Trigger: TCGCTTCGAGGACTGGCTCAAGTCGGCCGAGAGGAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTCCTCTCGGCCGACTaGAGCCAGTCCTCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVLSAD*SQSSKR
Trigger: TCGCTTCGAGGACTGGCTCAAGTCGGCCGAGAGGAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTGTCCCAGCGCTGGTaGCCCTCGTGCACCATCTGC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLSQRW*PSCTIC
Trigger: GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACCCGCTTCTGCAGATaGTCCCAGCGCTGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTRFCR*SQRWLP
Trigger: GGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTGATGGAGTCTATTTaGGAGTTCTGTGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLMESI*EFCGFG
Trigger: CCCGAAGCCACAGAACTCCAAAATAGACTCCATCAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACAGATCTTGAGCCACTaGCTCTTGCAGTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQQILSH*LLQLLE
Trigger: CTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp GTCCCGAGAGGACTTCCAACAGGTCCAGGAGGACATGCCCCTTCTTaGTGTCTGCGAATAAGTCAGATACAACTGAGGGAGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VPRGLPTGPGGHAPS*CLRISQIQLREVCA
Trigger: AGCACACACCTCCCTCAGTTGTATCTGACTTATTCGCAGACATCAAGAAGGGGCATGTCCTCCTGGACCTGTTGGAAGTCCTCTCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000148324.2
ENSMUST00000150317.8
CDS TCA 90 bp TGTTGTCCTGGAGAGTTCAGACTTAGCGTTAGGCGCTGTTGCTGCTaGTGCAGAGAAACCTTAAGGTCCTGGAGCTTCTCCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CCPGEFRLSVRRCCC*CRETLRSWSFSRRQ
Trigger: CTGCCTCCTGGAGAAGCTCCAGGACCTTAAGGTTTCTCTGCATCAGCAGCAACAGCGCCTAACGCTAAGTCTGAACTCTCCAGGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CCGTGTCTGCCTCTTTCAGGTGGAGAAGTTGGTTCCCAGTACTCATaGCTGCGGACTTCAGGGAGGACCTCTCATCGACTTCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: PCLPLSGGEVGSQYS*LRTSGRTSHRLPWK
Trigger: TTTCCAAGGAAGTCGATGAGAGGTCCTCCCTGAAGTCCGCAGTCATGAGTACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 90 bp ACGTCCTCCGCCAGGATGTGCTGGCTCAAGTCGGCCTTCATAGTCTaGAGTTCTTTCAAGCTGTGCGTCCAGTTAGCCAGAGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: TSSARMCWLKSAFIV*SSFKLCVQLARDFS
Trigger: AGAGAAGTCTCTGGCTAACTGGACGCACAGCTTGAAAGAACTTCAGACTATGAAGGCCGACTTGAGCCAGCACATCCTGGCGGAGGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp GGCAACTGCTGTCCCGAGAGGACTTCCAACAGGTCCAGGAGGACATaGCCCTTCTTGATGTCTGCGAATAAGTCAGATACAACTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GNCCPERTSNRSRRT*PFLMSANKSDTTEG
Trigger: TCCCTCAGTTGTATCTGACTTATTCGCAGACATCAAGAAGGGGCATGTCCTCCTGGACCTGTTGGAAGTCCTCTCGGGACAGCAGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000148324.2
ENSMUST00000150317.8
CDS GCA 90 bp TCCTGCTCACTGGCAAAGTCAGACGTCACCCTGGATTTGCTGTCTTaGAGGTGTTGCTCAAGAAGCCCCCTTTGTGTGTCATACCTCTCC +
Preference number: 5 (lower is better)
Translates to: SCSLAKSDVTLDLLS*RCCSRSPLCVSYLS
Trigger: GGAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TGCTCCTCTCCTGCTCACTGGCAAAGTCAGACGTCACCCTGGATTTaGTGTCTTGCAGGTGTTGCTCAAGAAGCCCCCTTTGTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: CSSPAHWQSQTSPWI*CLAGVAQEAPFVCH
Trigger: ATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CTGGCGGCGGGCAGAACCAAGGCTTGCTCTTCTGTTTGGTTGAGATaGTGCGACTGTTCCAGAAGTTCAATGGCTGCTCTTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LAAGRTKACSSVWLR*CDCSRSSMAALLAS
Trigger: AGAAGCAAGAAGAGCAGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp GCCCCCAAAGTCTCGGTGAGGCTCCGTAAATCAGCTACGGAGGATTaGAGTTCCTCTTGTTTAAGGTGTGCCAGCTCCAGTGTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: APKVSVRLRKSATED*SSSCLRCASSSVFW
Trigger: CCAAAAGACACTGGAGCTGGCACACCTTAAACAAGAGGAACTGCAATCCTCCGTAGCTGATTTACGGAGCCTCACCGAGACTTTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TGTTCCAAATGTTGTATCTTTCTATTCAGGGTTCCGTGCACTCGCTaGCACTGGCGGTTCATCTCCCCGAGGTGCTCAGCAAACTCCGTC +
Preference number: 5 (lower is better)
Translates to: CSKCCIFLFRVPCTR*HWRFISPRCSANSV
Trigger: GACGGAGTTTGCTGAGCACCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAACCCTGAATAGAAAGATACAACATTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp GATCCTCTCTCAGCTCAGCTGTGCTCCCACTGGGCGCATAGCTGTTaGATCCCCCTGCGACATGTGTTTTCACATCTTTCATCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: DPLSAQLCSHWAHSC*IPLRHVFSHLSSCS
Trigger: TGAGCAAGATGAAAGATGTGAAAACACATGTCGCAGGGGGATCCAACAGCTATGCGCCCAGTGGGAGCACAGCTGAGCTGAGAGAGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp ATCTTCTCCTCAGCATCCTCTAGGGCACTCCTGCATTCTTCCACCTaGGATCCGATCTCCGCAGGGACTATGCTGTACATCTCGGAATAC +
Preference number: 5 (lower is better)
Translates to: IFSSASSRALLHSST*DPISAGTMLYISEY
Trigger: GTATTCCGAGATGTACAGCATAGTCCCTGCGGAGATCGGATCCCAGGTGGAAGAATGCAGGAGTGCCCTAGAGGATGCTGAGGAGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp ATGTCACACTTCCTCTGCCGAACACCCCGGGCGGCCCTCTGCCATTaGTCTGACAGCTTGGAGAATTCAGAGACAAATTCTGGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: MSHFLCRTPRAALCH*SDSLENSETNSGLF
Trigger: AAAGAGACCAGAATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATGGCAGAGGGCCGCCCGGGGTGTTCGGCAGAGGAAGTGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp TCTTCTGGATCTCCTGGTTATCGCAGACGTCGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGCGAGCCAACCAGGTACGAAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSGSPGYRRRRRQQA*RAQTQCEPTRYEGC
Trigger: GCAACCTTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACGACGTCTGCGATAACCAGGAGATCCAGAAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000126903.2
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CCA 90 bp GCTTTTAGTATCTCTTGCAGTCTCTTCACCCTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCGGCCAACTTCAGAGCTTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: AFSISCSLFTLSAIS*MSEGGSANFRASSS
Trigger: CGAGCTGGAAGCTCTGAAGTTGGCCGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGCAAGAGATACTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 90 bp AGTCCCAGGACAGGCTCAGCTGATGGAGTCTATTTTGGAGTTCTGTaGCTTCGGGGCTCTGGCTTGGCAGATATTCCTTGTGGCTCACAT +
Preference number: 5 (lower is better)
Translates to: SPRTGSADGVYFGVL*LRGSGLADIPCGSH
Trigger: ATGTGAGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATAGACTCCATCAGCTGAGCCTGTCCTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAGGACATGCCCCTTCTaGATGTCTGCGAATAAGTCA +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRTCPF*MSANKS
Trigger: TGACTTATTCGCAGACATCAAGAAGGGGCATGTCCT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTCAGATTGTCTTTGTaGGATCTGTGCCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKFRLSL*DLCLML
Trigger: CAGCATGAGGCACAGATCCAACAAAGACAATCTGAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTTCTCGGCATTGGATaGAAAGGCCATGAGAACATC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLLGIG*KGHENI
Trigger: GATGTTCTCATGGCCTTTCAATCCAATGCCGAGAAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCTGGGACCTCTCAGTaGATTTTAAAAGCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKAGTSQ*ILKAVL
Trigger: AAGCACTGCTTTTAAAATCAACTGAGAGGTCCCAGC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGTTCTGGAGAGCCTCTaGAAGCCTAGAATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQVLESL*KPRILF
Trigger: GAAGAGAATTCTAGGCTTCAAGAGGCTCTCCAGAAC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACGGTGGGAGCTGCGTTaGTTTTGGAAATTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQRWELR*FWKFLE
Trigger: TTCCAGAAATTTCCAAAACAAACGCAGCTCCCACCG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTCCAGCTTGGCCACTaGGGTCTTGCAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLQLGH*GLADTE
Trigger: CTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGCCACAGCTCCAGCTaGGCCACTTGGGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSHSSS*ATWVLQ
Trigger: CTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGCTCAAAGGCCACGTaGGCTTGTTGCAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGSKAT*ACCSHS
Trigger: GCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCCAGGCCCTGGTCTTaGCACGTCTCTAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPRPWS*HVSSRE
Trigger: CTCTCTGCTAGAGACGTGCAAAGACCAGGGCCTGGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGCTGTCTGTAGAACTTaGTTTTCCATCTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQAVCRT*FSIWTS
Trigger: GCTGGTCCAGATGGAAAACAAAGTTCTACAGACAGC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTGGTTGCCCTCGTGCACCATCTGCTTCAGCTTGCTGGCTGTGTCGGTGCGGTTAACCAGGTACGAAGGTaGCTCATGTTTTTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: LVALVHHLLQLAGCVGAVNQVRR*LMFLSN
Trigger: GTTAGACAAAAACATGAGCAACCTTCGTACCTGGTT...AACCGCACCGACACAGCCAGCAAGCTGAAGCAGATGGTGCACGAGGGCAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000126903.2
CDS-3UTR CAA 90 bp TTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAAAGCTGGTTACACCCCTGCACTGTGTaGTTCGATATCTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQRLLGAVLLSPPHQSWLHPCTV*FDISLQ
Trigger: CTGCAGCGAGATATCGAACAACACAGTGCAGGGGTG...TAACCAGCTTTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGGTGGTCTGCTGGATaGAGTCACACTCCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDWWSAG*SHTPFH
Trigger: ATGAAACGGAGTGTGACTCAATCCAGCAGACCACCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCATGCGTCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSCVAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCAATGGAGCGACGCATGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGTCCTCTCGGCCGACTaGAGCCAGTCCTCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGVLSAD*SQSSKR
Trigger: TCGCTTCGAGGACTGGCTCAAGTCGGCCGAGAGGAC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGCTCCTCTTTGGCATTaGTATACAACACCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDAPLWH*YTTPRR
Trigger: CCTCCGAGGTGTTGTATACAAATGCCAAAGAGGAGC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAACCATCTGCTTCAGCTaGCTGGCTGTGTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGTICFS*LAVSVR
Trigger: CCGCACCGACACAGCCAGCAAGCTGAAGCAGATGGT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTTGTCCCAGCGCTGGTaGCCCTCGTGCACCATCTGC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLSQRW*PSCTIC
Trigger: GCAGATGGTGCACGAGGGCAACCAGCGCTGGGACAA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTTGGCAGATATTCCTaGTGGCTCACATTGACGGAG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLGRYS*WLTLTE
Trigger: CTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCGCAAGGAGCTGACTaGAGGCTGACGGGCTACCAA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPQGAD*RLTGYQ
Trigger: TTGGTAGCCCGTCAGCCTCAAGTCAGCTCCTTGCGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCGCAAGGAGCTGACTaGAGGCTGACGGGCTACCAA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPQGAD*RLTGYQ
Trigger: TTGGTAGCCCGTCAGCCTCAAGTCAGCTCCTTGCGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDNVVFS*PLHQKA
Trigger: AGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTGAGCCACTTGCTCTaGCAGTTGCTTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLSHLL*QLLEFL
Trigger: AAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGGGCCTTGGACTCTTaGCAAAGGCTGCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGALDS*QRLLGA
Trigger: AGCTCCCAGCAGCCTTTGCAAAGAGTCCAAGGCCCC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS TCA 90 bp GTCGTAAGAGCTCCAGAGCACTTCCACACTGTTCAAGGCTCTCTGTaGCAGAAGCTTTCGTACTCTCCCACAAGGCTGCTGTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: VVRAPEHFHTVQGSL*QKLSYSPTRLLCLH
Trigger: GTGAAGACACAGCAGCCTTGTGGGAGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAACAGTGTGGAAGTGCTCTGGAGCTCTTACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GCGCGCATGTGGCATCGTTTTCTGTGCTCCTGCATCTCAGGTGTCTaGGGAGCTGACGGAGTTTCACTAAGTCTTCTTTGGTTGACAGGA +
Preference number: 5 (lower is better)
Translates to: ARMWHRFLCSCISGV*GADGVSLSLLWLTG
Trigger: TCCTGTCAACCAAAGAAGACTTAGTGAAACTCCGTCAGCTCCTCAGACACCTGAGATGCAGGAGCACAGAAAACGATGCCACATGCGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TGCCTTGAAGCAAGGTCTGCAGGCTCTTGGAGAGGAAGGGGCTGCTaGGTTCTAAGTATCTGGCTCTCAGGATTCCCCACATACTGTCAA +
Preference number: 5 (lower is better)
Translates to: CLEARSAGSWRGRGC*VLSIWLSGFPTYCQ
Trigger: TTGACAGTATGTGGGGAATCCTGAGAGCCAGATACTTAGAACTCAGCAGCCCCTTCCTCTCCAAGAGCCTGCAGACCTTGCTTCAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp ATTTCCATCCTGAACTCCTTGAGCTTCTGCAGAAGATGTTTCACCTaGGACGCAGAACTCTTTGAGAGCTCGGTATCCTTGCCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ISILNSLSFCRRCFT*DAELFESSVSLPAA
Trigger: GGCGGCGGGCAAGGATACCGAGCTCTCAAAGAGTTCTGCGTCTCAGGTGAAACATCTTCTGCAGAAGCTCAAGGAGTTCAGGATGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 90 bp CCTGCAACGATAAGACCGCAGGCTTGCTGTGCTCCATGGAATATGTaGGTTGGGTTGTCCTCATGGTGGCCTCATCATAGAGCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: PATIRPQACCAPWNM*VGLSSWWPHHRACH
Trigger: GTGACAAGCTCTATGATGAGGCCACCATGAGGACAACCCAACTCACATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATCGTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp ACACTTCCTCTGCCGAACACCCCGGGCGGCCCTCTGCCATTGGTCTaGCAGCTTGGAGAATTCAGAGACAAATTCTGGTCTCTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: TLPLPNTPGGPLPLV*QLGEFRDKFWSLFY
Trigger: ATAGAAAAGAGACCAGAATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATGGCAGAGGGCCGCCCGGGGTGTTCGGCAGAGGAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp CTGGCCAGAAGTTCCTCATACACAGAGCCTTTAGCAATAAGATGCTaGAAGGTGTCTGCTGAGGAGCCATCGGCATGGTCTCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: LARSSSYTEPLAIRC*KVSAEEPSAWSPCW
Trigger: CCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACACCTTGCAGCATCTTATTGCTAAAGGCTCTGTGTATGAGGAACTTCTGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp GCGGCGGGCAGAACCAAGGCTTGCTCTTCTGTTTGGTTGAGATGCTaGGACTGTTCCAGAAGTTCAATGGCTGCTCTTCTTGCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: AAGRTKACSSVWLRC*DCSRSSMAALLASK
Trigger: CTTAGAAGCAAGAAGAGCAGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TGCTTCTCCACACTCTCCTGGTGCTGGCACAGAGAGTCCAACAACTaGCAGAGTTCCTCGGTGGGAGCTGCGTTTGTTTTGGAAATTTCT +
Preference number: 5 (lower is better)
Translates to: CFSTLSWCWHRESNN*QSSSVGAAFVLEIS
Trigger: AGAAATTTCCAAAACAAACGCAGCTCCCACCGAGGAACTCTGGCAGTTGTTGGACTCTCTGTGCCAGCACCAGGAGAGTGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CAAGGGATGCATAGTTATCATCAAATTCTTCCCATTTCTGTAGCATaGTCTGAAGCTGCGCACCACGCAGGCAGGCCTCTTCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QGMHSYHQILPISVA*SEAAHHAGRPLPPG
Trigger: CCCTGGAGGAAGAGGCCTGCCTGCGTGGTGCGCAGCTTCAGAGCATGCTACAGAAATGGGAAGAATTTGATGATAACTATGCATCCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp GTTGTTGGAGATACAAAGAAATTTCATGACGGAGCGGCTCCCACTTaGCACTTGCGACTCGACTCTGTTCTTCCAGCTGCAGCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: VVGDTKKFHDGAAPT*HLRLDSVLPAAASH
Trigger: GTGCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTTTGTATCTCCAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GTAAACCATGAGGGAAACGGAGCCTCTCCCCTTCGTCTCTCAGTTTaGCGACTTGCTTCTCAGAGTTCTGCAGCTCTGCTGTATGCACAT +
Preference number: 5 (lower is better)
Translates to: VNHEGNGASPLRLSV*RLASQSSAALLYAH
Trigger: ATGTGCATACAGCAGAGCTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAGAGACGAAGGGGAGAGGCTCCGTTTCCCTCATGGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp AAATGTTGTATCTTTCTATTCAGGGTTCCGTGCACTCGCTGCCACTaGCGGTTCATCTCCCCGAGGTGCTCAGCAAACTCCGTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: KCCIFLFRVPCTRCH*RFISPRCSANSVLS
Trigger: TGAAAGGACGGAGTTTGCTGAGCACCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAACCCTGAATAGAAAGATACAACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp CTGATGGAGTCTATTTTGGAGTTCTGTGGCTTCGGGGCTCTGGCTTaGCAGATATTCCTTGTGGCTCACATTGACGGAGACCATCAAGGC +
Preference number: 5 (lower is better)
Translates to: LMESILEFCGFGALA*QIFLVAHIDGDHQG
Trigger: GCCTTGATGGTCTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATAGACTCCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAAGGCCTCTTTCAGATaGTCTTTGTTGGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQKASFR*SLLDLC
Trigger: GCACAGATCCAACAAAGACAATCTGAAAGAGGCCTT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTTCTCGGCATTGGATaGAAAGGCCATGAGAACATC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLLGIG*KGHENI
Trigger: GATGTTCTCATGGCCTTTCAATCCAATGCCGAGAAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGAAATCAGAAAGTTTTaGCAGCCTTTGTTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKEIRKF*QPLFQA
Trigger: AGCCTGGAACAAAGGCTGCAAAAACTTTCTGATTTC...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCCTTCACGTGTGCTTaGGGTAAGAGCATCTTCACA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSFTCA*GKSIFT
Trigger: TGTGAAGATGCTCTTACCCAAAGCACACGTGAAGGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATCCCCAGTTCTCTTCTaGATTAGTCAGCCACTTACT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQSPVLF*ISQPLT
Trigger: AGTAAGTGGCTGACTAATCAAGAAGAGAACTGGGGA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTGCTGTCCCACTGGTaGCTGAGGTCCGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVLSHW*LRSVKV
Trigger: GACCTTTACGGACCTCAGCAACCAGTGGGACAGCAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAAGGATGTCAAATCTaGGGCTTTCTGGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQGCQI*GFLEEF
Trigger: AAATTCCTCCAGAAAGCCCAAGATTTGACATCCTTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTCATCTTGGGCGTTTaGCATGCTTTCTTGAACATT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLILGV*HAFLNI
Trigger: AATGTTCAAGAAAGCATGCAAAACGCCCAAGATGAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTGCCGAGCTGCTCTTaGGCATCCTGCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLPSCS*ASCSSS
Trigger: AGAGCTGGAGCAGGATGCCAAAGAGCAGCTCGGCAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGGAGCTGCGTTTGTTTaGGAAATTTCTGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDGAAFV*EISGRS
Trigger: GGACCTTCCAGAAATTTCCAAAACAAACGCAGCTCC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTTCCGGTGCCAAGTTaGGGAAAGAAGTTGAGATTT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLPVPS*GKKLRF
Trigger: AAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGTTGTCCATCCATTCTaGCGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGVVHPF*RLSWVL
Trigger: CAGGACCCAGGACAGGCGCAAGAATGGATGGACAAC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGTTGTCCATCCATTCTaGCGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLVVHPF*RLSWVL
Trigger: CAGGACCCAGGACAGGCGCAAGAATGGATGGACAAC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTGCTCTCTGGGATACTaGTTGATGTTGCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDCSLGY*LMLLER
Trigger: CCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTTGTAAAAGCTGGCTaGTCCTCTGAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLVKAG*SSETQA
Trigger: TGCCTGTGTTTCAGAGGACAAGCCAGCTTTTACAAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTTCGGCCTCCTCCTaGACCACTGGCAGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSSASS*TTGRKD
Trigger: GTCTTTCCTGCCAGTGGTCAAGGAGGAGGCCGAAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCTTCGGCCTCCTCCTaGACCACTGGCAGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSSASS*TTGRKD
Trigger: GTCTTTCCTGCCAGTGGTCAAGGAGGAGGCCGAAGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGCACCCTCGTCTGTTaGGCTGAGCCTCGGGGATGG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGTLVC*AEPRGW
Trigger: CCATCCCCGAGGCTCAGCCAAACAGACGAGGGTGCC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAAAGGCCACGTTGGCTaGTTGCAGCCACAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLKGHVG*LQPQLQ
Trigger: CTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAAAGGCCACGTTGGCTaGTTGCAGCCACAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPKGHVG*LQPQLQ
Trigger: CTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATGCAGCCATGTTTTCTaGGCATTCAGTTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQCSHVF*AFSSVN
Trigger: GTTCACAGAACTGAATGCCAAGAAAACATGGCTGCA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTTGAGGGACAGCCATaGCTCTTCCAGCCTCGCGAT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVEGQP*LFQPRD
Trigger: ATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTGGTGAAGTTTCTCTaGTATGTCTGGAAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLVKFL*YVWKLS
Trigger: ACTCAGCTTCCAGACATACAAGAGAAACTTCACCAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGAGGGGCAGGAAGCTTaGAGTCTGCCAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPEGQEA*SLPMTS
Trigger: GGAGGTCATTGGCAGACTCAAAGCTTCCTGCCCCTC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTGGTCTGCGAGGTCTaGGTTCACTTGGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLVCEV*VHLGPP
Trigger: AGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTGGTCTGCGAGGTCTaGGTTCACTTGGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLVCEV*VHLGPP
Trigger: AGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGCCGCCGGTACTGCTaGTTGATGAGCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSRRYC*LMSSSC
Trigger: ACAGCTGGAGCTCATCAACAAGCAGTACCGGCGGCT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGCCGCCGGTACTGCTaGTTGATGAGCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSRRYC*LMSSSC
Trigger: ACAGCTGGAGCTCATCAACAAGCAGTACCGGCGGCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTTCCACTCCAAACTTTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCTTGGCAGATATTCCTaGTGGCTCACATTGACGGAG +
Preference number: 5 (lower is better)
Translates to: LPLQTLQRLLGAVLLSPPLGRYS*WLTLTE
Trigger: CTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAG...AGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAAGGATCGGGCAAAGTaGTTGGCCTGGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLKDRAK*LAWVQL
Trigger: CAGCTGCACCCAGGCCAACAACTTTGCCCGATCCTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAAGGATCGGGCAAAGTaGTTGGCCTGGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPKDRAK*LAWVQL
Trigger: CAGCTGCACCCAGGCCAACAACTTTGCCCGATCCTT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp GCTCGGGCCTGGCATATGGACTCCATATTTTCTAATTCCAGTTCTTaGCTCCTGAGCCAGCTGTCAAGCTCCTTCACGTGTGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: ARAWHMDSIFSNSSS*LLSQLSSSFTCALG
Trigger: ACCCAAAGCACACGTGAAGGAGCTTGACAGCTGGCTCAGGAGTCAAGAACTGGAATTAGAAAATATGGAGTCCATATGCCAGGCCCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TTCTCTACTTCCTTAATCAGCTCCTTTTCTTCATGGAGGGCCTCGTaGAGCTCAGGAAGGGGATCTTCGCTTTGTGCCTTCAGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSTSLISSFSSWRAS*SSGRGSSLCAFRAC
Trigger: GCAGGCTCTGAAGGCACAAAGCGAAGATCCCCTTCCTGAGCTTCACGAGGCCCTCCATGAAGAAAAGGAGCTGATTAAGGAAGTAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TGTCATCGGTGCCTTGACGTAATAGCAGCTTTACATAGTCTGATTTaGAAGGCGTGCTGGCATCTGTGGGGACTGGTGCCTCAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: CHRCLDVIAALHSLI*KACWHLWGLVPQSC
Trigger: ACAGGACTGAGGCACCAGTCCCCACAGATGCCAGCACGCCTTTCAAATCAGACTATGTAAAGCTGCTATTACGTCAAGGCACCGATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TGGCTTCGGGGCTCTGGCTTGGCAGATATTCCTTGTGGCTCACATTaGCGGAGACCATCAAGGCCTTGTAGGTATCGAAGGCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: WLRGSGLADIPCGSH*RRPSRPCRYRRLLV
Trigger: TACTAAAAGCCTTCGATACCTACAAGGCCTTGATGGTCTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp GTCTCACTTGCTGAGTCCTTCAGCATCTTCTGGAATCTCTTCTCTTaGAGAGTTAGCCAGACCAGAGCATCCCTTACCTTGGCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VSLAESFSIFWNLFS*RVSQTRASLTLACV
Trigger: CACACAGGCCAAGGTAAGGGATGCTCTGGTCTGGCTAACTCTGCAAGAGAAGAGATTCCAGAAGATGCTGAAGGACTCAGCAAGTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 90 bp CTGGCAAAGTCAGACGTCACCCTGGATTTGCTGTCTTGCAGGTGTTaGTCAAGAAGCCCCCTTTGTGTGTCATACCTCTCCTGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: LAKSDVTLDLLSCRC*SRSPLCVSYLSCKS
Trigger: TGACTTACAGGAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CCATGCTCCTTCAGAGAGTCACTTAGCTGGGCCACAGTCTCAAACTaGTCCCTCTTCCTAGTCAATGCTTGGGAAAACAGATCCATTCGC +
Preference number: 5 (lower is better)
Translates to: PCSFRESLSWATVSN*SLFLVNAWENRSIR
Trigger: GCGAATGGATCTGTTTTCCCAAGCATTGACTAGGAAGAGGGAGCAGTTTGAGACTGTGGCCCAGCTAAGTGACTCTCTGAAGGAGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CACGGCTCTAAGACCACACATTTCTGCCTCGACTTGCTCGCCAAATaGTTCCCAGGTCTCCTTCTCGTGTTGAATATGTTGAACCCCCAA +
Preference number: 5 (lower is better)
Translates to: HGSKTTHFCLDLLAK*FPGLLLVLNMLNPQ
Trigger: TTGGGGGTTCAACATATTCAACACGAGAAGGAGACCTGGGAAGCATTTGGCGAGCAAGTCGAGGCAGAAATGTGTGGTCTTAGAGCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp ATTGCTTTTACTTCAGACTCGATCGCAACCACATCATCTGCCACCTaGTGGACGTGTGGGAGGGCCTCCATTATCTGTTGCTGTAAAGCG +
Preference number: 5 (lower is better)
Translates to: IAFTSDSIATTSSAT*WTCGRASIICCCKA
Trigger: CGCTTTACAGCAACAGATAATGGAGGCCCTCCCACACGTCCAGCAGGTGGCAGATGATGTGGTTGCGATCGAGTCTGAAGTAAAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TTTCTCCATTGCTTTTACTTCAGACTCGATCGCAACCACATCATCTaGCACCTGCTGGACGTGTGGGAGGGCCTCCATTATCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: FLHCFYFRLDRNHII*HLLDVWEGLHYLLL
Trigger: CAGCAACAGATAATGGAGGCCCTCCCACACGTCCAGCAGGTGGCAGATGATGTGGTTGCGATCGAGTCTGAAGTAAAAGCAATGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TCCAAAAGTTGTTCCAAATGTTGTATCTTTCTATTCAGGGTTCCGTaGACTCGCTGCCACTGGCGGTTCATCTCCCCGAGGTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SKSCSKCCIFLFRVP*TRCHWRFISPRCSA
Trigger: TGCTGAGCACCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAACCCTGAATAGAAAGATACAACATTTGGAACAACTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 90 bp GTCATGCAGAAGGACGTCACAGATATTAAACACAGACTCCACCCCTaGACTGTGTTGTTCGATATCTCGCTGCAGATCCTGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: VMQKDVTDIKHRLHP*TVLFDISLQILLLS
Trigger: GCTGAGCAGCAGGATCTGCAGCGAGATATCGAACAACACAGTGCAGGGGTGGAGTCTGTGTTTAATATCTGTGACGTCCTTCTGCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CCA 90 bp GCACTGTCCACTTCTGTTCAAATTGTGCTAAAGAGGCTCTCAGTGTaGCCGTGTCTGCCTCTTTCAGGTGGAGAAGTTGGTTCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: ALSTSVQIVLKRLSV*PCLPLSGGEVGSQY
Trigger: GTACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGACACGGCCACACTGAGAGCCTCTTTAGCACAATTTGAACAGAAGTGGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAAGGCCTCTTTCAGATaGTCTTTGTTGGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDKASFR*SLLDLC
Trigger: GCACAGATCCAACAAAGACAATCTGAAAGAGGCCTT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTGCCCATCAGACTCTaGAATGAAGATAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLPIRL*NEDSFP
Trigger: AGGGAAACTATCTTCATTCAAGAGTCTGATGGGCAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTCAAAGATGTGTGTTTaGTGTTCCACTGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDSKMCV*CSTARG
Trigger: CCCTCTTGCAGTGGAACACAAAACACACATCTTTGA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGGAGGACTGCAGGGTaGTGTGAATCTCAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGRTAG*CESQKH
Trigger: GTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGGAGGACTGCAGGGTaGTGTGAATCTCAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGRTAG*CESQKH
Trigger: GTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGACGTCACCCTGGATTaGCTGTCTTGCAGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPDVTLD*LSCRCC
Trigger: GCAACACCTGCAAGACAGCAAATCCAGGGTGACGTC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTGAAAGATCTGCTGTaGGATTTCCTCAAGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLKDLL*DFLKLC
Trigger: ACAAAGCTTGAGGAAATCCAACAGCAGATCTTTCAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGTGCTGTCCCACTGGTaGCTGAGGTCCGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGVLSHW*LRSVKV
Trigger: GACCTTTACGGACCTCAGCAACCAGTGGGACAGCAC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTTGATGTTAGCGCCTaGCTCTGTTCCAGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGFDVSA*LCSRRA
Trigger: AGCGCGCCTGGAACAGAGCAAGGCGCTAACATCAAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTACATCTCGGAATACTaGATGCGCAGTTTTTCCATA +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKYISEY*MRSFSI
Trigger: TATGGAAAAACTGCGCATCAAGTATTCCGAGATGTA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTGATGGTGAGCTCTTaGAGACTTCACTGCTCATCT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLMVSS*RLHCSS
Trigger: AGATGAGCAGTGAAGTCTCAAAGAGCTCACCATCAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAATACTTCTTGCTGTTCTaGTTTCAGGTGCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQYFLLF*FQVLMK
Trigger: CTTCATGAGCACCTGAAACAAGAACAGCAAGAAGTA...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTCTTCCACCACCTGTaGCATGTCCGCGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLFHHL*HVRVYS
Trigger: ACTGTAGACGCGGACATGCAACAGGTGGTGGAAGAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGTGCTTAAGAAGGGTTaGCAGTCGGTGGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPVLKKG*QSVELL
Trigger: CAGGAGCTCCACCGACTGCAAACCCTTCTTAAGCAC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGTGCTTAAGAAGGGTTaGCAGTCGGTGGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGVLKKG*QSVELL
Trigger: CAGGAGCTCCACCGACTGCAAACCCTTCTTAAGCAC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTGGTGAAGTTTCTCTaGTATGTCTGGAAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLVKFL*YVWKLS
Trigger: ACTCAGCTTCCAGACATACAAGAGAAACTTCACCAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGAGGGGCAGGAAGCTTaGAGTCTGCCAATGACCTCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGEGQEA*SLPMTS
Trigger: GGAGGTCATTGGCAGACTCAAAGCTTCCTGCCCCTC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACAAGCTGTTGGAACTTaGCTTCCTGCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPQAVGT*LPAAAA
Trigger: GGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACAAGCTGTTGGAACTTaGCTTCCTGCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLQAVGT*LPAAAA
Trigger: GGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCCAGGAAGGCCTCTTaGGTCTTCTGCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSRKAS*VFCRSL
Trigger: GAGTGACCTGCAGAAGACCAAAGAGGCCTTCCTGGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCCAGGAAGGCCTCTTaGGTCTTCTGCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSRKAS*VFCRSL
Trigger: GAGTGACCTGCAGAAGACCAAAGAGGCCTTCCTGGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGATTTTCTTTTTACATaGGTCCCAGGTCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQDFLFT*VPGLCS
Trigger: ACTGCAGAGACCTGGGACCAATGTAAAAAGAAAATC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCAGCCGCCTTGGCCTaGCTGCTGGCCTTGATCAGC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSAALA*LLALIS
Trigger: GCTGATCAAGGCCAGCAGCAAGGCCAAGGCGGCTGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAACCAGGTACGAAGGTaGCTCATGTTTTTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQNQVRR*LMFLSN
Trigger: GTTAGACAAAAACATGAGCAACCTTCGTACCTGGTT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACACCCCTGCACTGTGTaGTTCGATATCTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHPCTV*FDISLQ
Trigger: CTGCAGCGAGATATCGAACAACACAGTGCAGGGGTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACCTCATCAAAGCTGGTTAGAGAAGCATCCGGATCCAGGCTTCTCTGCAAGGACTCACACTCCGTTTCATaGGCACAGGCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: TSSKLVREASGSRLLCKDSHSVS*AQASES
Trigger: TGACTCTGATGCCTGTGCCAATGAAACGGAGTGTGA...GTCCTTGCAGAGAAGCCTGGATCCGGATGCTTCTCTAACCAGCTTTGATGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAGCCGCCGGTACTGCTaGTTGATGAGCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSRRYC*LMSSSC
Trigger: ACAGCTGGAGCTCATCAACAAGCAGTACCGGCGGCT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTACCCGCTTCTGCAGATaGTCCCAGCGCTGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSTRFCR*SQRWLP
Trigger: GGGCAACCAGCGCTGGGACAATCTGCAGAAGCGGGT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp CTCATACACAGAGCCTTTAGCAATAAGATGCTGCAAGGTGTCTGCTaGGGAGCCATCGGCATGGTCTCCATGTTGGAGGAGATCCAAGAT +
Preference number: 5 (lower is better)
Translates to: LIHRAFSNKMLQGVC*GAIGMVSMLEEIQD
Trigger: ATCTTGGATCTCCTCCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACACCTTGCAGCATCTTATTGCTAAAGGCTCTGTGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CCTGCTGGTTACCCAGAATGCCATCGTGAATCAGCTTGCACTTTCTaGTCTGAGAAAGGATGTTGTCAGGGAGAAGGGCGATGGGAACAA +
Preference number: 5 (lower is better)
Translates to: PAGYPECHRESACTF*SEKGCCQGEGRWEQ
Trigger: TTGTTCCCATCGCCCTTCTCCCTGACAACATCCTTTCTCAGATCAGAAAGTGCAAGCTGATTCACGATGGCATTCTGGGTAACCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GTTTTAACTCCAGAATCTGTGGCTGGGGAGCATCCTTCTGTCTGCTaGACTGTGGCCTTTCAGTTAGGACAGAGTCAAGCTCAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: VLTPESVAGEHPSVC*TVAFQLGQSQAQKG
Trigger: GCCTTTCTGAGCTTGACTCTGTCCTAACTGAAAGGCCACAGTTCAGCAGACAGAAGGATGCTCCCCAGCCACAGATTCTGGAGTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000148825.2
CDS TCA 90 bp TGTAGGTATCGAAGGCTTTTAGTATCTCTTGCAGTCTCTTCACCCTaGGCGCTATTTCCTGGATGTCAGAGGGAGGCTCGGCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: CRYRRLLVSLAVSSP*ALFPGCQREARPTS
Trigger: TGAAGTTGGCCGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGCAAGAGATACTAAAAGCCTTCGATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp GTCTGCCTCTTTCAGGTGGAGAAGTTGGTTCCCAGTACTCATGACTaGGGACTTCAGGGAGGACCTCTCATCGACTTCCTTGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: VCLFQVEKLVPSTHD*GLQGGPLIDFLGKF
Trigger: AAATTTTCCAAGGAAGTCGATGAGAGGTCCTCCCTGAAGTCCGCAGTCATGAGTACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp GTTGATTCGTCTTGTCATCTCCTCCAGTTTAACAGGAGGCACAGCTaGCAGGCTCTTCTCGGCATTGGATTGAAAGGCCATGAGAACATC +
Preference number: 5 (lower is better)
Translates to: VDSSCHLLQFNRRHS*QALLGIGLKGHENI
Trigger: GATGTTCTCATGGCCTTTCAATCCAATGCCGAGAAGAGCCTGCCAGCTGTGCCTCCTGTTAAACTGGAGGAGATGACAAGACGAATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 90 bp TCGTCCAGAGCTTTAGATTTCAGGGCAAGCTGGTTTTCTATATCCTaGCAGTCCAGTAACAGCTTCTCCATGGAGACGGCACTTTCGGGT +
Preference number: 5 (lower is better)
Translates to: SSRALDFRASWFSIS*QSSNSFSMETALSG
Trigger: ACCCGAAAGTGCCGTCTCCATGGAGAAGCTGTTACTGGACTGCCAGGATATAGAAAACCAGCTTGCCCTGAAATCTAAAGCTCTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTAAAATCTGTCACATaGACAGACTCAGACCTGGCA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLKSVT*TDSDLA
Trigger: TGCCAGGTCTGAGTCTGTCAATGTGACAGATTTTAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGCTCTGAGGACATTTaGGAAGGGCTCCAGGTTCGA +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSSEDI*EGLQVR
Trigger: TCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCTTCCAGTAACTTCTaGTCCTCAGGAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLASSNF*SSGGPS
Trigger: GGAAGGACCTCCTGAGGACAAGAAGTTACTGGAAGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCCATGTAGGAAGCTaGCTGGGAGATGATGCCCTC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSHVGS*LGDDAL
Trigger: GAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGTTGGTATTAAATAGATaGCTGACACTTGCGTACTGT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLVLNR*LTLAYC
Trigger: ACAGTACGCAAGTGTCAGCAATCTATTTAATACCAA...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGCTGTGTTCTGTGGCTaGCTGGAAACACTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPAVFCG*LETLPV
Trigger: CACAGGAAGTGTTTCCAGCAAGCCACAGAACACAGC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCTGTGTTCTGTGGCTaGCTGGAAACACTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPAVFCG*LETLPV
Trigger: CACAGGAAGTGTTTCCAGCAAGCCACAGAACACAGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAAATCTCTGTGTTCTGTaGGTCCTTGCTTTGAGATTT +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQNLCVL*VLALRF
Trigger: AAATCTCAAAGCAAGGACCAACAGAACACAGAGATT...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTGATCGTGGCCTTGTaGAGCTGCGAGGTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLIVAL*SCEVLD
Trigger: ATCCAGAACCTCGCAGCTCAACAAGGCCACGATCAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCTCTTCAGAAGATCATaGTATTCTTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKLFRRS*YSSILI
Trigger: GATCAAGATGGAAGAATACAATGATCTTCTGAAGAG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCCCCTTCCAGGTCCTaGCTGTGTTTCCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSPSRS*LCFPRK
Trigger: TTTTCTGGGGAAACACAGCAAGGACCTGGAAGGGGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGCAGAGAGGCGACCTaGTACTCAATCTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSREAT*YSISVS
Trigger: GCTGACAGAGATTGAGTACAAGGTCGCCTCTCTGCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCCAGGCCCTGGTCTTaGCACGTCTCTAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPRPWS*HVSSRE
Trigger: CTCTCTGCTAGAGACGTGCAAAGACCAGGGCCTGGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCCTTCGTCTCTCAGTTaGGCGACTTGCTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPPSSLS*ATCFSE
Trigger: CTCTGAGAAGCAAGTCGCCAAACTGAGAGACGAAGG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCTTCGTCTCTCAGTTaGGCGACTTGCTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPSSLS*ATCFSE
Trigger: CTCTGAGAAGCAAGTCGCCAAACTGAGAGACGAAGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCCTGCAAAGCAGCTTaGCTCTTGGCGTGTTGCAAA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPACKAA*LLACCK
Trigger: TTTGCAACACGCCAAGAGCAAAGCTGCTTTGCAGGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCCTGGTCGATTCTCTaGTTGAGGGACAGCCATTGC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSWSIL*LRDSHC
Trigger: GCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGGTCCTGGGACACGTaGAGGGATTGTTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRSWDT*RDCSFQ
Trigger: CTGGAAAGAACAATCCCTCAACGTGTCCCAGGACCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGGTCCTGGGACACGTaGAGGGATTGTTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRSWDT*RDCSFQ
Trigger: CTGGAAAGAACAATCCCTCAACGTGTCCCAGGACCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCAAGCTGTTGGAACTTaGCTTCCTGCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGQAVGT*LPAAAA
Trigger: GGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGTGTTGGCAAGCTGTaGGAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGVGKL*ELCFLL
Trigger: CAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACACC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCAGGAAGGCCTCTTaGGTCTTCTGCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSRKAS*VFCRSL
Trigger: GAGTGACCTGCAGAAGACCAAAGAGGCCTTCCTGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp TGGGCTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGCAATCTCAAATTCATTaGATTTTGCCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: WAPRVHLDKRRESLDLVKQSQIH*ILPAAS
Trigger: AGATGCTGCTGGCAAAATCAAATGAATTTGAGATTG...CTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACGATTTTCTTTTTACATaGGTCCCAGGTCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDDFLFT*VPGLCS
Trigger: ACTGCAGAGACCTGGGACCAATGTAAAAAGAAAATC...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAACCAGGTACGAAGGTaGCTCATGTTTTTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDNQVRR*LMFLSN
Trigger: GTTAGACAAAAACATGAGCAACCTTCGTACCTGGTT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCACCCCTGCACTGTGTaGTTCGATATCTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGHPCTV*FDISLQ
Trigger: CTGCAGCGAGATATCGAACAACACAGTGCAGGGGTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFSWRI*SSASLS
Trigger: AGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFSWRI*SSASLS
Trigger: AGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTTCCACTCCAAACTTaGCAAAGGCTGCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLPLQT*QRLLGA
Trigger: AGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000139204.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTTCCACTCCAAACTTaGCAAAGGCTGCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLPLQT*QRLLGA
Trigger: AGCTCCCAGCAGCCTTTGCAAAGTTTGGAGTGGAAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000139204.8
CDS TCA 90 bp CTGGTTCCAGCAATTTGGGGATCTTCAGCTCATGTTCTGCGATCCTaGAGGCCTCTTTCAGATTGTCTTTGTTGGATCTGTGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: LVPAIWGSSAHVLRS*RPLSDCLCWICASC
Trigger: GCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAGATCCCCAAATTGCTGGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 90 bp CACTTACTTAGGCTTCTGCAATCATCTTCCAATCTCAGTAGCTGCTaGAAGGAGTTATTCAGTTCCCCTGCTCGGGCCTGGCATATGGAC +
Preference number: 5 (lower is better)
Translates to: HLLRLLQSSSNLSSC*KELFSSPARAWHMD
Trigger: GTCCATATGCCAGGCCCGAGCAGGGGAACTGAATAACTCCTTTCAGCAGCTACTGAGATTGGAAGATGATTGCAGAAGCCTAAGTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GCCAAGGAGGTGTTCAGGGAGGCTTCAGCCATCACCAGCTGGTCTTaGAAACCACTAAGGAGGCCATACTGTCTTTCTTTAGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: AKEVFREASAITSWS*KPLRRPYCLSLVFF
Trigger: GAAGAAAACTAAAGAAAGACAGTATGGCCTCCTTAGTGGTTTTCAAGACCAGCTGGTGATGGCTGAAGCCTCCCTGAACACCTCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp ATGCGCAGTTTTTCCATAATGTTCTCGAAACTCAGCTTGCCTTTCTaGAGAATGCTCCGCAGCTCCTCAAACTGTTCTGCCCGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: MRSFSIMFSKLSLPF*RMLRSSSNCSARSG
Trigger: CCCAGAACGGGCAGAACAGTTTGAGGAGCTGCGGAGCATTCTTCAGAAAGGCAAGCTGAGTTTCGAGAACATTATGGAAAAACTGCGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GGTTTCTTAAGAGTGGAGGGATGCTGGTCCTCACTGAACTTCTCCTaGAGCACCATCTGGACCTTTTCCAAGTTGCACTTCACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: GFLRVEGCWSSLNFS*STIWTFSKLHFTVL
Trigger: CAAGACTGTGAAGTGCAACTTGGAAAAGGTCCAGATGGTGCTTCAGGAGAAGTTCAGTGAGGACCAGCATCCCTCCACTCTTAAGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp GCACCGCCTTGGAAACGGAGTCTGCTCTCCAGCTCCTGTAACTTCTaGATTCTCTCCTTAGCCATTATTTGGTCCTTAGATCCATCACAA +
Preference number: 5 (lower is better)
Translates to: APPWKRSLLSSSCNF*ILSLAIIWSLDPSQ
Trigger: TTGTGATGGATCTAAGGACCAAATAATGGCTAAGGAGAGAATGCAGAAGTTACAGGAGCTGGAGAGCAGACTCCGTTTCCAAGGCGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TCACTAAGTCTTCTTTGGTTGACAGGAGATTTGATGTTAGCGCCTTaGTCTGTTCCAGGCGCGCTAAGGCTTCTTTGTAAGACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SLSLLWLTGDLMLAP*SVPGALRLLCKTWA
Trigger: TGCCCAGGTCTTACAAAGAAGCCTTAGCGCGCCTGGAACAGAGCAAGGCGCTAACATCAAATCTCCTGTCAACCAAAGAAGACTTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp GCCTTGCTGCTGGCCTTGATCAGCTGGTCGCCCATCTGCTTCAGCTaGAGTTTGTTTTCTGTGAATAAGCTGATTTCTTCCATACAGTCT +
Preference number: 5 (lower is better)
Translates to: ALLLALISWSPICFS*SLFSVNKLISSIQS
Trigger: AGACTGTATGGAAGAAATCAGCTTATTCACAGAAAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp TATCGCAGACGTCGTAGACAACAGGCTTGGAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAAGGTTGCTCATGTTTTTGTCTAACT +
Preference number: 5 (lower is better)
Translates to: YRRRRRQQAWRAQTQ*EPTRYEGCSCFCLT
Trigger: AGTTAGACAAAAACATGAGCAACCTTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACGACGTCTGCGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000126903.2
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CCA 90 bp CCTGCTCGACGAAGTCCTGAACTTCAGAGTCCAGCTCGTTCAGCTTaGAATGCCAGAGGTCGAGCTCATCCCATATTTTCTTTTGGATTT +
Preference number: 5 (lower is better)
Translates to: PARRSPELQSPARSA*NARGRAHPIFSFGF
Trigger: AAATCCAAAAGAAAATATGGGATGAGCTCGACCTCTGGCATTCCAAGCTGAACGAGCTGGACTCTGAAGTTCAGGACTTCGTCGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp GGACAGCTCACAGATGCTGCCAGCTGTCTGCCTTCATTCAAGGTTTaGCAAAGCCGGGCATGCTTCCCATCAATGTTTCTTTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: GQLTDAASCLPSFKV*QSRACFPSMFLFIC
Trigger: GCAAATAAAAAGAAACATTGATGGGAAGCATGCCCGGCTTTGCCAAACCTTGAATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAGGGAGGTGTGTGCTTaGCCAGCTGTGAGTTTATCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGREVCA*PAVSLS
Trigger: GGATAAACTCACAGCTGGCAAAGCACACACCTCCCT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCCAGACATCCAACTaGGCCTTCGCTTCATCAAGC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFQTSN*AFASSS
Trigger: GCTTGATGAAGCGAAGGCCAAGTTGGATGTCTGGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTGTTCTAGCTGGCACTaGATGCTTTCCGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPCSSWH*MLSGDK
Trigger: CTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACCATCGCCTTTTCAGTaGACAGCTGGTTGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLPSPFQ*TAGCLV
Trigger: TACCAGACAACCAGCTGTCAACTGAAAAGGCGATGG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGTGTGTGTAACTCCCTaGGTACAGAGTTACTCGGCT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGVCVTP*VQSYSA
Trigger: AGCCGAGTAACTCTGTACCAAGGGAGTTACACACAC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCATCACCAGCTGGTCTaGAAAACCACTAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGHHQLV*KTTKEA
Trigger: GGCCTCCTTAGTGGTTTTCAAGACCAGCTGGTGATG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACAATCTCTGTGTTCTGTaGGTCCTTGCTTTGAGATTT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDNLCVL*VLALRF
Trigger: AAATCTCAAAGCAAGGACCAACAGAACACAGAGATT...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCGAATAGCAGCCAGCTaGTCTCTAAGATTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGRIAAS*SLRLPS
Trigger: GCTCGGCAATCTTAGAGACAAGCTGGCTGCTATTCG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTCGTGTTGAATATGTaGAACCCCCAAATTTACACA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLVLNM*NPQIYT
Trigger: TGTGTAAATTTGGGGGTTCAACATATTCAACACGAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGATTGCAGTTCCTCTaGTTTAAGGTGTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGLQFL*FKVCQL
Trigger: GAGCTGGCACACCTTAAACAAGAGGAACTGCAATCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGATTGCAGTTCCTCTaGTTTAAGGTGTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGLQFL*FKVCQL
Trigger: GAGCTGGCACACCTTAAACAAGAGGAACTGCAATCC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAACTAAGTCTTCTTTGGTaGACAGGAGATTTGATGTTA +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQLSLLW*TGDLML
Trigger: TAACATCAAATCTCCTGTCAACCAAAGAAGACTTAG...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTACATCTCGGAATACTaGATGCGCAGTTTTTCCATA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDYISEY*MRSFSI
Trigger: TATGGAAAAACTGCGCATCAAGTATTCCGAGATGTA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CTCCCAGAGTCCACTTGGACAAGAGGAGGGAGTCCCTGGACCTTGTCAAGGCAAGATAAGAGGATAGCTTaGATCTTTGCAACCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LPESTWTRGGSPWTLSRQDKRIA*IFATFF
Trigger: GAAAAAGGTTGCAAAGATCAAAGCTATCCTCTTATC...TTGCCTTGACAAGGTCCAGGGACTCCCTCCTCTTGTCCAAGTGGACTCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAATGACCTCCCCATGCTaGAGATGTTCTTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGMTSPC*RCSSGG
Trigger: TCCACCTGAAGAACATCTCAAGCATGGGGAGGTCAT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATGACCTCCCCATGCTaGAGATGTTCTTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPMTSPC*RCSSGG
Trigger: TCCACCTGAAGAACATCTCAAGCATGGGGAGGTCAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTCAGTTTGGCGACTaGCTTCTCAGAGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSQFGD*LLRVLQ
Trigger: CTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTTGAGGGACAGCCATaGCTCTTCCAGCCTCGCGAT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSVEGQP*LFQPRD
Trigger: ATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAAC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCTGGTCGATTCTCTaGTTGAGGGACAGCCATTGC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSWSIL*LRDSHC
Trigger: GCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACGTCTCCCCCATCCATaGTCAGAGAACTTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRLPHP*SENFVS
Trigger: TGAGACAAAGTTCTCTGACAATGGATGGGGGAGACG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGATAAGACCGCAGGCTaGCTGTGCTCCATGGAATAT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPDKTAG*LCSMEY
Trigger: ATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGATAAGACCGCAGGCTaGCTGTGCTCCATGGAATAT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLDKTAG*LCSMEY
Trigger: ATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTGGTCTGCGAGGTCTaGGTTCACTTGGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLVCEV*VHLGPP
Trigger: AGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATCACACTCCGTTTCATaGGCACAGGCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPSHSVS*AQASES
Trigger: TGACTCTGATGCCTGTGCCAATGAAACGGAGTGTGA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCACACTCCGTTTCATaGGCACAGGCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSHSVS*AQASES
Trigger: TGACTCTGATGCCTGTGCCAATGAAACGGAGTGTGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGGTGGTCTGCTGGATaGAGTCACACTCCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGWWSAG*SHTPFH
Trigger: ATGAAACGGAGTGTGACTCAATCCAGCAGACCACCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCATGCGTCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSCVAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCAATGGAGCGACGCATGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGAGAAGTGTTCTACGTaGGTCAGCTGCAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLEKCST*VSCRSI
Trigger: AATGGACCTGCAGCTGACCAACGTAGAACACTTCTC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGAGAAGTGTTCTACGTaGGTCAGCTGCAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPEKCST*VSCRSI
Trigger: AATGGACCTGCAGCTGACCAACGTAGAACACTTCTC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGFSWRI*SSASLS
Trigger: AGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTTGGCAGATATTCCTaGTGGCTCACATTGACGGAG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLGRYS*WLTLTE
Trigger: CTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTGATGGAGTCTATTTaGGAGTTCTGTGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLMESI*EFCGFG
Trigger: CCCGAAGCCACAGAACTCCAAAATAGACTCCATCAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTGATGGAGTCTATTTaGGAGTTCTGTGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLMESI*EFCGFG
Trigger: CCCGAAGCCACAGAACTCCAAAATAGACTCCATCAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPNVVFS*PLHQKA
Trigger: AGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACAGATCTTGAGCCACTaGCTCTTGCAGTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLQILSH*LLQLLE
Trigger: CTCAAGCAACTGCAAGAGCAAGTGGCTCAAGATCTG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAAGGACATCAGATCTaGAGCCACTTGCTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQGHQI*SHLLLQ
Trigger: CTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACAAGGACATCAGATCTaGAGCCACTTGCTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPQGHQI*SHLLLQ
Trigger: CTGCAAGAGCAAGTGGCTCAAGATCTGATGTCCTTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp CCTGGCATATGGACTCCATATTTTCTAATTCCAGTTCTTGACTCCTaGGCCAGCTGTCAAGCTCCTTCACGTGTGCTTTGGGTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PGIWTPYFLIPVLDS*ASCQAPSRVLWVRA
Trigger: TGCTCTTACCCAAAGCACACGTGAAGGAGCTTGACAGCTGGCTCAGGAGTCAAGAACTGGAATTAGAAAATATGGAGTCCATATGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TCCTTACTCTGCAAATACTTTTCTCCTTCTAGTACAAGCTTTTCTTaGTGGCTGAGGTATGTGTTGGCGAGGTGGAGCGTGCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: SLLCKYFSPSSTSFS*WLRYVLARWSVLSH
Trigger: GTGGGACAGCACGCTCCACCTCGCCAACACATACCTCAGCCATCAAGAAAAGCTTGTACTAGAAGGAGAAAAGTATTTGCAGAGTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp CCACTAAGGAGGCCATACTGTCTTTCTTTAGTTTTCTTCAAGGTATaGAGCTCCTGCTGTAGACTGCCCAAGTGGCACACTGAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PLRRPYCLSLVFFKV*SSCCRLPKWHTEGL
Trigger: CAGACCTTCAGTGTGCCACTTGGGCAGTCTACAGCAGGAGCTTCATACCTTGAAGAAAACTAAAGAAAGACAGTATGGCCTCCTTAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp GTGGCATCGTTTTCTGTGCTCCTGCATCTCAGGTGTCTGAGGAGCTaGCGGAGTTTCACTAAGTCTTCTTTGGTTGACAGGAGATTTGAT +
Preference number: 5 (lower is better)
Translates to: VASFSVLLHLRCLRS*RSFTKSSLVDRRFD
Trigger: ATCAAATCTCCTGTCAACCAAAGAAGACTTAGTGAAACTCCGTCAGCTCCTCAGACACCTGAGATGCAGGAGCACAGAAAACGATGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TTGTTGAGCTGCGAGGTTCTGGATTCTGCTCTCTGGGATACTTGTTaGTGTTGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTCTTGC +
Preference number: 5 (lower is better)
Translates to: LLSCEVLDSALWDTC*CCWKGAIKLSIHSC
Trigger: GCAAGAATGGATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCAGAATCCAGAACCTCGCAGCTCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TTCTACCATGGTGATCTGAACTCCTTGTTTAGCTTCTTGGATCTTTaGCTGAAGGCCAGCTCTGAGGACATTTTGGAAGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: FYHGDLNSLFSFLDL*LKASSEDILEGLQV
Trigger: AACCTGGAGCCCTTCCAAAATGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TTCAAGGCTCTCTGTGACAGAAGCTTTCGTACTCTCCCACAAGGCTaGTGTGTCTTCACACTGTTGAATCACGTTTTTCTCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: FKALCDRSFRTLPQG*CVFTLLNHVFLTAI
Trigger: GATGGCAGTGAGAAAAACGTGATTCAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AGATTCGTTTTGACGTTGCTGAACCAGTCGTTAAAGTTCTTACACTaGTCGTTCAGGAACGTGGCAAAGTGGTCCTGCAGCGCGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RFVLTLLNQSLKFLH*SFRNVAKWSCSAFF
Trigger: AAAGAACGCGCTGCAGGACCACTTTGCCACGTTCCTGAACGAGCAGTGTAAGAACTTTAACGACTGGTTCAGCAACGTCAAAACGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CTGTCAAGCTCCTTCACGTGTGCTTTGGGTAAGAGCATCTTCACATaGTGTAGGACGGTCTCTACCTGCTGTATTTTACTGTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LSSSFTCALGKSIFT*CRTVSTCCILLFPP
Trigger: AGGAGGAAACAGTAAAATACAGCAGGTAGAGACCGTCCTACAGCATGTGAAGATGCTCTTACCCAAAGCACACGTGAAGGAGCTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AAGTCCACCATGCAGGATGCACTCAGCCTCTTTCTGAAGCACTGCTaGTTTGTCATGGAATTCTCTGTAAGACTCCATCTTCTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: KSTMQDALSLFLKHC*FVMEFSVRLHLLLE
Trigger: CTCAAGCAGAAGATGGAGTCTTACAGAGAATTCCATGACAAAGCAGCAGTGCTTCAGAAAGAGGCTGAGTGCATCCTGCATGGTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AATTTTGCCTCCATGCCACCGGTTCCAGAATCGTTTTCTTCTCTTTaGTCTTCGGTAATCCTCACGGCTCTAAGACCACACATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: NFASMPPVPESFSSL*SSVILTALRPHISA
Trigger: GGCAGAAATGTGTGGTCTTAGAGCCGTGAGGATTACCGAAGAGCAAAGAGAAGAAAACGATTCTGGAACCGGTGGCATGGAGGCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AAGTCCACTAGCAGATCCTCCTTCTTCTGGTTTAGATTCAGAATCTaGTTTTCCAACCTTTCCATCTCTCCCTGTAACGACGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: KSTSRSSFFWFRFRI*FSNLSISPCNDGRS
Trigger: CGACCTGCCGTCGTTACAGGGAGAGATGGAAAGGTTGGAAAAGCAGATTCTGAATCTAAACCAGAAGAAGGAGGATCTGCTAGTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATACAGTAGGTCTCACTaGCTGAGTCCTTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLYSRSH*LSPSAS
Trigger: AGATGCTGAAGGACTCAGCAAGTGAGACCTACTGTA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGTTCTAGCTGGCACTaGATGCTTTCCGGAGACAAG +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCSSWH*MLSGDK
Trigger: CTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCAGTTGACAGCTGGTaGTCTGGTATCTCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSVDSW*SGISSG
Trigger: ACCACTTGAGATACCAGACAACCAGCTGTCAACTGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGACGTCACCCTGGATTaGCTGTCTTGCAGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSDVTLD*LSCRCC
Trigger: GCAACACCTGCAAGACAGCAAATCCAGGGTGACGTC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCACATCTTTCATCTaGCTCAGGACAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFTSFI*LRTEDS
Trigger: GGAGTCCTCTGTCCTGAGCAAGATGAAAGATGTGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGCTCTTCTGTTTGGTaGAGATGCTGCGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCSSVW*RCCDCS
Trigger: GGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGTTCTGGAGAGCCTCTaGAAGCCTAGAATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPVLESL*KPRILF
Trigger: GAAGAGAATTCTAGGCTTCAAGAGGCTCTCCAGAAC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCTAAGTCTTCTTTGGTaGACAGGAGATTTGATGTTA +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDLSLLW*TGDLML
Trigger: TAACATCAAATCTCCTGTCAACCAAAGAAGACTTAG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACTTCACTAAGTCTTCTTaGGTTGACAGGAGATTTGAT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDFTKSS*VDRRFD
Trigger: ATCAAATCTCCTGTCAACCAAAGAAGACTTAGTGAA...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGAGCTGCGTTTGTTTaGGAAATTTCTGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGAAFV*EISGRS
Trigger: GGACCTTCCAGAAATTTCCAAAACAAACGCAGCTCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACGGTGGGAGCTGCGTTaGTTTTGGAAATTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRWELR*FWKFLE
Trigger: TTCCAGAAATTTCCAAAACAAACGCAGCTCCCACCG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACCTTATTCTTTCGAGTaGTGTGAAGAAGCCTGTCGC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPPYSFE*CEEACR
Trigger: GCGACAGGCTTCTTCACACAACTCGAAAGAATAAGG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAGCCTCAGTTCCACTaGGTAAGTCATTATCTCAGC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQPQFH*VSHYLS
Trigger: GCTGAGATAATGACTTACCAAGTGGAACTGAGGCTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTTGTAAAAGCTGGCTaGTCCTCTGAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLVKAG*SSETQA
Trigger: TGCCTGTGTTTCAGAGGACAAGCCAGCTTTTACAAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTGGCCACTTGGGTCTaGCAGACACGGAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLATWV*QTRRMS
Trigger: AGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTTGCACTTCACAGTCTaGAGTTTCCAGGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLHFTV*SFQERA
Trigger: GGCCCTTTCCTGGAAACTCAAGACTGTGAAGTGCAA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCCATCCTGAACTCCTaGAGCTTCTGCAGAAGATGT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSILNS*SFCRRC
Trigger: ACATCTTCTGCAGAAGCTCAAGGAGTTCAGGATGGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCATTGTCAGAGAACTTaGTCTCAACTCGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPHCQRT*SQLVQS
Trigger: GCTCTGGACGAGTTGAGACAAAGTTCTCTGACAATG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCACGTTATTCTTCTTTaGAAACAGCTCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDHVILL*KQLNNS
Trigger: GGAATTGTTGAGCTGTTTCAAAAGAAGAATAACGTG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGATAAGACCGCAGGCTaGCTGTGCTCCATGGAATAT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGDKTAG*LCSMEY
Trigger: ATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCAGGAAGGCCTCTTaGGTCTTCTGCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSRKAS*VFCRSL
Trigger: GAGTGACCTGCAGAAGACCAAAGAGGCCTTCCTGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAGCAGAAGGACATCTTGTCTGAGTTGTCCTGGGCTCCCAGAGTCCACTTGGACCAATCTCAAATTCATTaGATTTTGCCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: QQKDILSELSWAPRVHLDQSQIH*ILPAAS
Trigger: AGATGCTGCTGGCAAAATCAAATGAATTTGAGATTG...GTCCAAGTGGACTCTGGGAGCCCAGGACAACTCAGACAAGATGTCCTTCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGCTGTCTGTAGAACTTaGTTTTCCATCTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGAVCRT*FSIWTS
Trigger: GCTGGTCCAGATGGAAAACAAAGTTCTACAGACAGC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGCTGTCTGTAGAACTTaGTTTTCCATCTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLAVCRT*FSIWTS
Trigger: GCTGGTCCAGATGGAAAACAAAGTTCTACAGACAGC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGGTGGTCTGCTGGATaGAGTCACACTCCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGWWSAG*SHTPFH
Trigger: ATGAAACGGAGTGTGACTCAATCCAGCAGACCACCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCATGCGTCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSCVAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCAATGGAGCGACGCATGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCTCCTCTTTGGCATTaGTATACAACACCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGAPLWH*YTTPRR
Trigger: CCTCCGAGGTGTTGTATACAAATGCCAAAGAGGAGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGAGAAGTGTTCTACGTaGGTCAGCTGCAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGEKCST*VSCRSI
Trigger: AATGGACCTGCAGCTGACCAACGTAGAACACTTCTC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGCTCTTGCAGTTGCTaGAGTTTCTTCTCGATCACG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCSCSC*SFFSIT
Trigger: CGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGCTCTTGCAGTTGCTaGAGTTTCTTCTCGATCACG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCSCSC*SFFSIT
Trigger: CGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATGCTCTTGCAGTTGCTaGAGTTTCTTCTCGATCACG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLCSCSC*SFFSIT
Trigger: CGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp GAAGCTCTGAGCTGGTGGACCTGGCTGGTCACGTTATTCTTCTTTTaGAACAGCTCAACAATTCCAGATGCCATGTCTTCTAACAATGGC +
Preference number: 5 (lower is better)
Translates to: EALSWWTWLVTLFFF*NSSTIPDAMSSNNG
Trigger: GCCATTGTTAGAAGACATGGCATCTGGAATTGTTGAGCTGTTTCAAAAGAAGAATAACGTGACCAGCCAGGTCCACCAGCTCAGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 90 bp TTCGTCTCTCAGTTTGGCGACTTGCTTCTCAGAGTTCTGCAGCTCTaGTGTATGCACATCTGCTTTCTGAAGCTGTTTGCTAATACTCTG +
Preference number: 5 (lower is better)
Translates to: FVSQFGDLLLRVLQL*CMHICFLKLFANTL
Trigger: CAGAGTATTAGCAAACAGCTTCAGAAAGCAGATGTGCATACAGCAGAGCTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAGAGACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CAAGCTGGTTTTCTATATCCTGGCAGTCCAGTAACAGCTTCTCCATaGAGACGGCACTTTCGGGTTTTTGTAGCATCTTCAGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QAGFLYPGSPVTASP*RRHFRVFVASSAFL
Trigger: AAGAAAGGCTGAAGATGCTACAAAAACCCGAAAGTGCCGTCTCCATGGAGAAGCTGTTACTGGACTGCCAGGATATAGAAAACCAGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 90 bp GAACTTTGTCTCAACTCGTCCAGAGCTTTAGATTTCAGGGCAAGCTaGTTTTCTATATCCTGGCAGTCCAGTAACAGCTTCTCCATGGAG +
Preference number: 5 (lower is better)
Translates to: ELCLNSSRALDFRAS*FSISWQSSNSFSME
Trigger: CTCCATGGAGAAGCTGTTACTGGACTGCCAGGATATAGAAAACCAGCTTGCCCTGAAATCTAAAGCTCTGGACGAGTTGAGACAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCATCTTGCCTGAGCTaGAGCCTTGGAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPSCLS*SLGALL
Trigger: AAGAAGTGCTCCAAGGCTCAAGCTCAGGCAAGATGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTGCCCATCAGACTCTaGAATGAAGATAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLPIRL*NEDSFP
Trigger: AGGGAAACTATCTTCATTCAAGAGTCTGATGGGCAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTCTCACTGCCATCCTaGAATCGTGGGAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFSLPS*NRGREP
Trigger: TGGCTCTCTCCCACGATTCAAGGATGGCAGTGAGAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCTTCACGTGTGCTTaGGGTAAGAGCATCTTCACA +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSFTCA*GKSIFT
Trigger: TGTGAAGATGCTCTTACCCAAAGCACACGTGAAGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCCCCAGTTCTCTTCTaGATTAGTCAGCCACTTACT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSPVLF*ISQPLT
Trigger: AGTAAGTGGCTGACTAATCAAGAAGAGAACTGGGGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAGATGTGTGGATTCTTaGATTGTCTCTTCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPRCVDS*IVSSPS
Trigger: CGAGGGAGAAGAGACAATCAAAGAATCCACACATCT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGCTGGGACCTCTCAGTaGATTTTAAAAGCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPAGTSQ*ILKAVL
Trigger: AAGCACTGCTTTTAAAATCAACTGAGAGGTCCCAGC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCGAATAGCAGCCAGCTaGTCTCTAAGATTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRIAAS*SLRLPS
Trigger: GCTCGGCAATCTTAGAGACAAGCTGGCTGCTATTCG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAATCAGCTACGGAGGATaGCAGTTCCTCTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGISYGG*QFLLFK
Trigger: CTTAAACAAGAGGAACTGCAATCCTCCGTAGCTGAT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTATCAGCTACGGAGGATaGCAGTTCCTCTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPISYGG*QFLLFK
Trigger: CTTAAACAAGAGGAACTGCAATCCTCCGTAGCTGAT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACTTCCGGTGCCAAGTTaGGGAAAGAAGTTGAGATTT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLPVPS*GKKLRF
Trigger: AAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTGATGGTGAGCTCTTaGAGACTTCACTGCTCATCT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPLMVSS*RLHCSS
Trigger: AGATGAGCAGTGAAGTCTCAAAGAGCTCACCATCAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGGATACTTGTTGATGTaGCTGGAAAGGAGCCATCAA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLGYLLM*LERSHQ
Trigger: TTGATGGCTCCTTTCCAGCAACATCAACAAGTATCC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAGGATACTTGTTGATGTaGCTGGAAAGGAGCCATCAA +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPGYLLM*LERSHQ
Trigger: TTGATGGCTCCTTTCCAGCAACATCAACAAGTATCC...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTGCTCTCTGGGATACTaGTTGATGTTGCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGCSLGY*LMLLER
Trigger: CCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCAGCCTCAGTTCCACTaGGTAAGTCATTATCTCAGC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGQPQFH*VSHYLS
Trigger: GCTGAGATAATGACTTACCAAGTGGAACTGAGGCTG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAGCAGAGAGGCGACCTaGTACTCAATCTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSREAT*YSISVS
Trigger: GCTGACAGAGATTGAGTACAAGGTCGCCTCTCTGCT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGCAGCCATGTTTTCTaGGCATTCAGTTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCSHVF*AFSSVN
Trigger: GTTCACAGAACTGAATGCCAAGAAAACATGGCTGCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCTGGTCGATTCTCTaGTTGAGGGACAGCCATTGC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSWSIL*LRDSHC
Trigger: GCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCTGGTGAAGTTTCTCTaGTATGTCTGGAAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLVKFL*YVWKLS
Trigger: ACTCAGCTTCCAGACATACAAGAGAAACTTCACCAG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCCATCCTGAACTCCTaGAGCTTCTGCAGAAGATGT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSILNS*SFCRRC
Trigger: ACATCTTCTGCAGAAGCTCAAGGAGTTCAGGATGGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGGTGTTGGCAAGCTGTaGGAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSGVGKL*ELCFLL
Trigger: CAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACACC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCAGAGGTCCTCCCATaGTCTGTGCAAAAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAEVLP*SVQKLD
Trigger: ATCCAGCTTTTGCACAGACAATGGGAGGACCTCTGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAACACGATCCACGAATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPNTIHE*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATTCGTGGATCGTGTT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAACACGATCCACGAATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLNTIHE*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATTCGTGGATCGTGTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAACACGATCCACGAATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPNTIHE*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATTCGTGGATCGTGTT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGCTGTCTGTAGAACTTaGTTTTCCATCTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGAVCRT*FSIWTS
Trigger: GCTGGTCCAGATGGAAAACAAAGTTCTACAGACAGC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTCAGTTGGCGCATCTaGTCCTCAGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFSWRI*SSASLS
Trigger: AGAGAGTGACGCTGAGGACAAGATGCGCCAACTGAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTGAGCCACTTGCTCTaGCAGTTGCTTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLSHLL*QLLEFL
Trigger: AAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATTGAGCCACTTGCTCTaGCAGTTGCTTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLSHLL*QLLEFL
Trigger: AAGAAACTCAAGCAACTGCAAGAGCAAGTGGCTCAA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp GCCTTCGCTTCATCAAGCAAAGCCAGAACTGAGCACTTAGAGTCATaGAACTCCAGGAGTGGGATGAAGTTTTTACCCAAAACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AFASSSKARTEHLES*NSRSGMKFLPKTLL
Trigger: CAACAACGTTTTGGGTAAAAACTTCATCCCACTCCTGGAGTTTCATGACTCTAAGTGCTCAGTTCTGGCTTTGCTTGATGAAGCGAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 90 bp ACAGAGGACTCCATGACCTGCAGTTCAAGTGGTTTCTCATTGCTCTaGAGCAACGACTGTATGTCAGCCACTCTTCTAGAAAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: TEDSMTCSSSGFSLL*SNDCMSATLLENSA
Trigger: TGCAGAATTTTCTAGAAGAGTGGCTGACATACAGTCGTTGCTTCAGAGCAATGAGAAACCACTTGAACTGCAGGTCATGGAGTCCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TACATCTTCTGGTTCCAGCAATTTGGGGATCTTCAGCTCATGTTCTaGGATCCTGAAGGCCTCTTTCAGATTGTCTTTGTTGGATCTGTG +
Preference number: 5 (lower is better)
Translates to: YIFWFQQFGDLQLMF*DPEGLFQIVFVGSV
Trigger: CACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAGATCCCCAAATTGCTGGAACCAGAAGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 90 bp AGTCCAACAACTGCCAGAGTTCCTCGGTGGGAGCTGCGTTTGTTTTaGAAATTTCTGGAAGGTCCTCCTGAAGAGTCTCTAAAATTATTG +
Preference number: 5 (lower is better)
Translates to: SPTTARVPRWELRLF*KFLEGPPEESLKLL
Trigger: CAATAATTTTAGAGACTCTTCAGGAGGACCTTCCAGAAATTTCCAAAACAAACGCAGCTCCCACCGAGGAACTCTGGCAGTTGTTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAAGGGCATGTTCTATGTaGATTCTGCACTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGRACSM*ILHWNV
Trigger: TACATTCCAGTGCAGAATCAACATAGAACATGCCCT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTAAAATCTGTCACATaGACAGACTCAGACCTGGCA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLKSVT*TDSDLA
Trigger: TGCCAGGTCTGAGTCTGTCAATGTGACAGATTTTAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATCTTTCAGATTGTCTTaGTTGGATCTGTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGSFRLS*LDLCLM
Trigger: CATGAGGCACAGATCCAACAAAGACAATCTGAAAGA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTCTTTCAGATTGTCTTaGTTGGATCTGTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPSFRLS*LDLCLM
Trigger: CATGAGGCACAGATCCAACAAAGACAATCTGAAAGA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCATCGCCTTTTCAGTaGACAGCTGGTTGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPSPFQ*TAGCLV
Trigger: TACCAGACAACCAGCTGTCAACTGAAAAGGCGATGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAAGAGCTCGAGATTTTaGGAACTACAAGCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPKSSRF*ELQASS
Trigger: ACTGGAAGCTTGTAGTTCCAAAAATCTCGAGCTCTT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAAGTTTTTGCAGCCTTaGTTCCAGGCTCAGTTTTGT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPKFLQP*FQAQFC
Trigger: ACAAAACTGAGCCTGGAACAAAGGCTGCAAAAACTT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGAAATCAGAAAGTTTTaGCAGCCTTTGTTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGEIRKF*QPLFQA
Trigger: AGCCTGGAACAAAGGCTGCAAAAACTTTCTGATTTC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTTCCTAGTCAATGCTaGGGAAAACAGATCCATTCG +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLPSQC*GKQIHS
Trigger: CGAATGGATCTGTTTTCCCAAGCATTGACTAGGAAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAAGGATGTCAAATCTaGGGCTTTCTGGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQGCQI*GFLEEF
Trigger: AAATTCCTCCAGAAAGCCCAAGATTTGACATCCTTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCTCTTCTGTTTGGTaGAGATGCTGCGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCSSVW*RCCDCS
Trigger: GGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATTCGCTACCGTTGTTTaGAAGGAATCTCTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPFATVV*KESLCS
Trigger: AGAACACAGAGATTCCTTCAAAACAACGGTAGCGAA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATTCGCTACCGTTGTTTaGAAGGAATCTCTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLFATVV*KESLCS
Trigger: AGAACACAGAGATTCCTTCAAAACAACGGTAGCGAA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAATCGTTTTCTTCTCTTaGCTCTTCGGTAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGIVFFS*LFGNPH
Trigger: GTGAGGATTACCGAAGAGCAAAGAGAAGAAAACGAT...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATACTTCTTGCTGTTCTaGTTTCAGGTGCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPYFLLF*FQVLMK
Trigger: CTTCATGAGCACCTGAAACAAGAACAGCAAGAAGTA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGAAAGACATGGAGTTaGTTCTGCTCAGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGKTWS*FCSASF
Trigger: AAAGGAAGCTGAGCAGAACAAACTCCATGTCTTTCC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTCGTTCAAAGACTGTaGCAAAGCCGTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPFVQRL*QSRLLL
Trigger: AAGAAGAAGACGGCTTTGCAACAGTCTTTGAACGAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCTCAGTTTGGCGACTaGCTTCTCAGAGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSQFGD*LLRVLQ
Trigger: CTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGACACGTTGAGGGATaGTTCTTTCCAGTAATTCAA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGHVEG*FFPVIQ
Trigger: TTGAATTACTGGAAAGAACAATCCCTCAACGTGTCC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGAGGACACGTTGAGGGATaGTTCTTTCCAGTAATTCAA +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGGHVEG*FFPVIQ
Trigger: TTGAATTACTGGAAAGAACAATCCCTCAACGTGTCC...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCGTCTCCCCCATCCATaGTCAGAGAACTTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSRLPHP*SENFVS
Trigger: TGAGACAAAGTTCTCTGACAATGGATGGGGGAGACG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACATTGGTCTGACAGCTaGGAGAATTCAGAGACAAAT +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHWSDS*ENSETN
Trigger: ATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACATTGGTCTGACAGCTaGGAGAATTCAGAGACAAAT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPHWSDS*ENSETN
Trigger: ATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACATTGGTCTGACAGCTaGGAGAATTCAGAGACAAAT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLHWSDS*ENSETN
Trigger: ATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAGATTTTCTTTTTACATaGGTCCCAGGTCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLDFLFT*VPGLCS
Trigger: ACTGCAGAGACCTGGGACCAATGTAAAAAGAAAATC...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAACCAGGTACGAAGGTaGCTCATGTTTTTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLNQVRR*LMFLSN
Trigger: GTTAGACAAAAACATGAGCAACCTTCGTACCTGGTT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCACACTCCGTTTCATaGGCACAGGCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSHSVS*AQASES
Trigger: TGACTCTGATGCCTGTGCCAATGAAACGGAGTGTGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGCTCCTCTTTGGCATTaGTATACAACACCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSAPLWH*YTTPRR
Trigger: CCTCCGAGGTGTTGTATACAAATGCCAAAGAGGAGC...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTTGGCAGATATTCCTaGTGGCTCACATTGACGGAG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLGRYS*WLTLTE
Trigger: CTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTGATGGAGTCTATTTaGGAGTTCTGTGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLMESI*EFCGFG
Trigger: CCCGAAGCCACAGAACTCCAAAATAGACTCCATCAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAATGTAGTCTTCTCCTaGCCCCTTCACCAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSNVVFS*PLHQKA
Trigger: AGCCTTCTGGTGAAGGGGCAAGGAGAAGACTACATT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TTATCCAAACTGATATACGTCTCTTCCGTCATACTTCCCTGTGTCTaGATAGTGTTTGCTTCTTGGCGTAGCTCTTCAAGTTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSKLIYVSSVILPCV*IVFASWRSSSSWVV
Trigger: CACCACCCAACTTGAAGAGCTACGCCAAGAAGCAAACACTATTCAGACACAGGGAAGTATGACGGAAGAGACGTATATCAGTTTGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000148825.2
CDS GCA 90 bp AATCCATCTAGGTCCTTATCCAGCCTGAGTAATGACTTTTTCCGATaGTTCACGGCTGGAGCAGTAGGATCCTTAAGACCAATTTTACTG +
Preference number: 5 (lower is better)
Translates to: NPSRSLSSLSNDFFR*FTAGAVGSLRPILL
Trigger: CAGTAAAATTGGTCTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGGAAAAAGTCATTACTCAGGCTGGATAAGGACCTAGATGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AGCAACGACTGTATGTCAGCCACTCTTCTAGAAAATTCTGCACTTTaGTCTTCGAGTACTTTTAACTCTTCCTTCAGCCTTCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SNDCMSATLLENSAL*SSSTFNSSFSLPLS
Trigger: GGACAGAGGAAGGCTGAAGGAAGAGTTAAAAGTACTCGAAGAGCAAAGTGCAGAATTTTCTAGAAGAGTGGCTGACATACAGTCGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TTAAAGTTCTTACACTGCTCGTTCAGGAACGTGGCAAAGTGGTCCTaGAGCGCGTTCTTTTTGGTATTAAATAGATTGCTGACACTTGCG +
Preference number: 5 (lower is better)
Translates to: LKFLHCSFRNVAKWS*SAFFLVLNRLLTLA
Trigger: CGCAAGTGTCAGCAATCTATTTAATACCAAAAAGAACGCGCTGCAGGACCACTTTGCCACGTTCCTGAACGAGCAGTGTAAGAACTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp GCTTTGGGTAAGAGCATCTTCACATGCTGTAGGACGGTCTCTACCTaGTGTATTTTACTGTTTCCTCCTCCAAGAGTCAAGAAATCAGAA +
Preference number: 5 (lower is better)
Translates to: ALGKSIFTCCRTVST*CILLFPPPRVKKSE
Trigger: TTCTGATTTCTTGACTCTTGGAGGAGGAAACAGTAAAATACAGCAGGTAGAGACCGTCCTACAGCATGTGAAGATGCTCTTACCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp TGTTCAAATACACGCTTCACATCCTTTATTTCCTTTAGGAAAGACTaGTGTGCCTGGATTTCGGCCTGGACCAGGTCCTTATTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: CSNTRFTSFISFRKD*CAWISAWTRSLFFR
Trigger: TCGAAAGAATAAGGACCTGGTCCAGGCCGAAATCCAGGCACAGCAGTCTTTCCTAAAGGAAATAAAGGATGTGAAGCGTGTATTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp AGTTCTAGTTGCTGGGACCTCTCAGTTGATTTTAAAAGCAGTGCTTaGTGTTGGCTCTGTAAATCCTCCAGGAGAGCATTTAAACCGTCA +
Preference number: 5 (lower is better)
Translates to: SSSCWDLSVDFKSSA*CWLCKSSRRAFKPS
Trigger: TGACGGTTTAAATGCTCTCCTGGAGGATTTACAGAGCCAACACCAAGCACTGCTTTTAAAATCAACTGAGAGGTCCCAGCAACTAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CGGCAATTTCTCCATCTGAAGCTGGTGAAGTTTCTCTTGTATGTCTaGAAGCTGAGTTATGAGCACTGTCCACTTCTGTTCAAATTGTGC +
Preference number: 5 (lower is better)
Translates to: RQFLHLKLVKFLLYV*KLSYEHCPLLFKLC
Trigger: GCACAATTTGAACAGAAGTGGACAGTGCTCATAACTCAGCTTCCAGACATACAAGAGAAACTTCACCAGCTTCAGATGGAGAAATTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTACAGTAGGTCTCACTaGCTGAGTCCTTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSYSRSH*LSPSAS
Trigger: AGATGCTGAAGGACTCAGCAAGTGAGACCTACTGTA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGGGAACCTCTTTAATTaGTTCCTTCTTTGTCAAGTC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPGNLFN*FLLCQV
Trigger: GACTTGACAAAGAAGGAACAAATTAAAGAGGTTCCC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTGATTCTGGAGGTCTaGAATGTTTTTAAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLILEV*NVFKEL
Trigger: GAGCTCTTTAAAAACATTCAAGACCTCCAGAATCAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTACTGATTCTGGAGGTCTaGAATGTTTTTAAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLLILEV*NVFKEL
Trigger: GAGCTCTTTAAAAACATTCAAGACCTCCAGAATCAG...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGATGCAGCGCGTTCTTTTaGGTATTAAATAGATTGCTG +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGCSAFF*VLNRLL
Trigger: CAGCAATCTATTTAATACCAAAAAGAACGCGCTGCA...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCATGCAGCGCGTTCTTTTaGGTATTAAATAGATTGCTG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPCSAFF*VLNRLL
Trigger: CAGCAATCTATTTAATACCAAAAAGAACGCGCTGCA...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTATCTTCGAGTGGCATTTaGCCTTCTGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLSSSGI*PSDEFK
Trigger: TTTGAATTCATCAGAAGGCAAAATGCCACTCGAAGA...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAAGACTGAAATATTCCTaGGAGATATCATCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPRLKYS*EISSSV
Trigger: CACACTGGATGATATCTCCAAGGAATATTTCAGTCT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCCACTAAGACTGAAATATTCCTaGGAGATATCATCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: AQCTGISEPLLNKVGGPLRLKYS*EISSSV
Trigger: CACACTGGATGATATCTCCAAGGAATATTTCAGTCT...TAGTGGGCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCCTCATCTTGGGCGTTTaGCATGCTTTCTTGAACATT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGLILGV*HAFLNI
Trigger: AATGTTCAAGAAAGCATGCAAAACGCCCAAGATGAG...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTCGTGTTGAATATGTaGAACCCCCAAATTTACACA +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLVLNM*NPQIYT
Trigger: TGTGTAAATTTGGGGGTTCAACATATTCAACACGAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCCTTATTCTTTCGAGTaGTGTGAAGAAGCCTGTCGC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSPYSFE*CEEACR
Trigger: GCGACAGGCTTCTTCACACAACTCGAAAGAATAAGG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCAATCCCATATTTTCTTTaGGATTTCGTGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPIPYFL*DFVSFL
Trigger: GAGGAAGCTCACGAAATCCAAAAGAAAATATGGGAT...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAACCTTTTTCTCCATaGCTTTTACTTCAGACTCGA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQPFSP*LLLQTR
Trigger: TCGAGTCTGAAGTAAAAGCAATGGAGAAAAAGGTTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTTCGTTCAAAGACTGTaGCAAAGCCGTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGFVQRL*QSRLLL
Trigger: AAGAAGAAGACGGCTTTGCAACAGTCTTTGAACGAA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTAAGGTGGAAACATTGTaGCCGAATAGGTTTGAATCA +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPKVETL*PNRFES
Trigger: TGATTCAAACCTATTCGGCAACAATGTTTCCACCTT...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTCCATCCTGAACTCCTaGAGCTTCTGCAGAAGATGT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSSILNS*SFCRRC
Trigger: ACATCTTCTGCAGAAGCTCAAGGAGTTCAGGATGGA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAACCAGGTACGAAGGTaGCTCATGTTTTTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGNQVRR*LMFLSN
Trigger: GTTAGACAAAAACATGAGCAACCTTCGTACCTGGTT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTGCTCTTGCAGTTGCTaGAGTTTCTTCTCGATCACG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSCSCSC*SFFSIT
Trigger: CGTGATCGAGAAGAAACTCAAGCAACTGCAAGAGCA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TCTGAAGCTGGTGAAGTTTCTCTTGTATGTCTGGAAGCTGAGTTATaGGCACTGTCCACTTCTGTTCAAATTGTGCTAAAGAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SEAGEVSLVCLEAEL*ALSTSVQIVLKRLS
Trigger: TGAGAGCCTCTTTAGCACAATTTGAACAGAAGTGGACAGTGCTCATAACTCAGCTTCCAGACATACAAGAGAAACTTCACCAGCTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 90 bp AGGAAACTCCCCACCTCATTCAAAGATGTGTGTTTTGTGTTCCACTaGAAGAGGGTCTCAACGGGAACCTCTTTAATTTGTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RKLPTSFKDVCFVFH*KRVSTGTSLICSFF
Trigger: AAAGAAGGAACAAATTAAAGAGGTTCCCGTTGAGACCCTCTTGCAGTGGAACACAAAACACACATCTTTGAATGAGGTGGGGAGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CTTTCTCCATCTTTTATTGAGCCTTCTCAGTTCTTTAGAAATAGATaGGGCAACTTCTCTACTGCTGACTCCAATCAGGAAACTCCCCAC +
Preference number: 5 (lower is better)
Translates to: LSPSFIEPSQFFRNR*GNFSTADSNQETPH
Trigger: GTGGGGAGTTTCCTGATTGGAGTCAGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAACTGAGAAGGCTCAATAAAAGATGGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTTTCAGATTGTCTTTGTaGGATCTGTGCCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSFRLSL*DLCLML
Trigger: CAGCATGAGGCACAGATCCAACAAAGACAATCTGAA...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCGGGAACCTCTTTAATTaGTTCCTTCTTTGTCAAGTC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGGNLFN*FLLCQV
Trigger: GACTTGACAAAGAAGGAACAAATTAAAGAGGTTCCC...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTTTGGTATTAAATAGATaGCTGACACTTGCGTACTGT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPLVLNR*LTLAYC
Trigger: ACAGTACGCAAGTGTCAGCAATCTATTTAATACCAA...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTTCCTAGTCAATGCTaGGGAAAACAGATCCATTCG +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLPSQC*GKQIHS
Trigger: CGAATGGATCTGTTTTCCCAAGCATTGACTAGGAAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCTCTTCGAGTGGCATTTaGCCTTCTGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGSSSGI*PSDEFK
Trigger: TTTGAATTCATCAGAAGGCAAAATGCCACTCGAAGA...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCATCCCATATTTTCTTTaGGATTTCGTGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGIPYFL*DFVSFL
Trigger: GAGGAAGCTCACGAAATCCAAAAGAAAATATGGGAT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACTCTTCAGAAGATCATaGTATTCTTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGLFRRS*YSSILI
Trigger: GATCAAGATGGAAGAATACAATGATCTTCTGAAGAG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTGATAAGAGGATAGCTTaGATCTTTGCAACCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPDKRIA*IFATFF
Trigger: GAAAAAGGTTGCAAAGATCAAAGCTATCCTCTTATC...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp CAATCAGCTCAGTGCACAGGAATTTCCGAACCATTACTAAATAAGGTAGGGGGCAAAGTCAACTACCCATaGCTTGTAGTCCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: QSAQCTGISEPLLNKVGGKVNYP*LVVHFH
Trigger: ATGGAAATGGACTACAAGCAATGGGTAGTTGACTTT...GCCCCCTACCTTATTTAGTAATGGTTCGGAAATTCCTGTGCACTGAGCTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GTAAAAAGAGCTGACCCGGGTGCTGAATGGGAGGTTTTGGTTTATAACCTGGGACACGTTATTCTTCTTTaGAAACAGCTCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: VKRADPGAEWEVLVYNLGHVILL*KQLNNS
Trigger: GGAATTGTTGAGCTGTTTCAAAAGAAGAATAACGTG...TCCCAGGTTATAAACCAAAACCTCCCATTCAGCACCCGGGTCAGCTCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCACGTTATTCTTCTTTaGAAACAGCTCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPHVILL*KQLNNS
Trigger: GGAATTGTTGAGCTGTTTCAAAAGAAGAATAACGTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ATAGTTCCAAGTTTCTTTACCAACCCCTGGTGGCCAAACAGCTCAACCAGACCTCAATCTCAAATTCATTaGATTTTGCCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: IVPSFFTNPWWPNSSTRPQSQIH*ILPAAS
Trigger: AGATGCTGCTGGCAAAATCAAATGAATTTGAGATTG...AGGTCTGGTTGAGCTGTTTGGCCACCAGGGGTTGGTAAAGAAACTTGGAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp GGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTGTGTGGCTCTTCCACAATCTCAAATTCATTaGATTTTGCCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: GPYELCYNNCFPQCVALPQSQIH*ILPAAS
Trigger: AGATGCTGCTGGCAAAATCAAATGAATTTGAGATTG...TGGAAGAGCCACACACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAACACGATCCACGAATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSNTIHE*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATTCGTGGATCGTGTT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TCCATTCGCTCTCCTGATACTTCCATTTTTCCCCAGTTCTCTTCTTaGTTAGTCAGCCACTTACTTAGGCTTCTGCAATCATCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: SIRSPDTSIFPQFSS*LVSHLLRLLQSSSN
Trigger: ATTGGAAGATGATTGCAGAAGCCTAAGTAAGTGGCTGACTAATCAAGAAGAGAACTGGGGAAAAATGGAAGTATCAGGAGAGCGAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TCCATTATCTGTTGCTGTAAAGCGGCCACCTGGTCACTTAACTCGTaGATGGTCTGGATTAAGTCATCTGTTTCAAAAATGATTGACAGG +
Preference number: 5 (lower is better)
Translates to: SIICCCKAATWSLNS*MVWIKSSVSKMIDR
Trigger: CCTGTCAATCATTTTTGAAACAGATGACTTAATCCAGACCATTCACGAGTTAAGTGACCAGGTGGCCGCTTTACAGCAACAGATAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp AGCTGTTTGCTAATACTCTGCCCACTGATTTCGTTCAAAGACTGTTaGAAAGCCGTCTTCTTCTTGATGAGTTGGCTGTATAATCGCTTT +
Preference number: 5 (lower is better)
Translates to: SCLLILCPLISFKDC*KAVFFLMSWLYNRF
Trigger: AAAGCGATTATACAGCCAACTCATCAAGAAGAAGACGGCTTTGCAACAGTCTTTGAACGAAATCAGTGGGCAGAGTATTAGCAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp TTCTTAATCTGCAGATCCACAGCCCTTATCTTACTTATCGATGCCTaGTGTCTGTCCCGTGCTATTAAAAATGTGTCCAGCTGCTTAATT +
Preference number: 5 (lower is better)
Translates to: FLICRSTALILLIDA*CLSRAIKNVSSCLI
Trigger: AATTAAGCAGCTGGACACATTTTTAATAGCACGGGACAGACACCAGGCATCGATAAGTAAGATAAGGGCTGTGGATCTGCAGATTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCTGAAAGATCTGCTGTaGGATTTCCTCAAGCTTTGT +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSLKDLL*DFLKLC
Trigger: ACAAAGCTTGAGGAAATCCAACAGCAGATCTTTCAG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp CTCTCCAGCTCCTGTAACTTCTGCATTCTCTCCTTAGCCATTATTTaGTCCTTAGATCCATCACAAAGACTGAAATATTCCTTGGAGATA +
Preference number: 5 (lower is better)
Translates to: LSSSCNFCILSLAII*SLDPSQRLKYSLEI
Trigger: TATCTCCAAGGAATATTTCAGTCTTTGTGATGGATCTAAGGACCAAATAATGGCTAAGGAGAGAATGCAGAAGTTACAGGAGCTGGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCAACCTTTTTCTCCATaGCTTTTACTTCAGACTCGA +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSQPFSP*LLLQTR
Trigger: TCGAGTCTGAAGTAAAAGCAATGGAGAAAAAGGTTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTAAGGTGGAAACATTGTaGCCGAATAGGTTTGAATCA +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSKVETL*PNRFES
Trigger: TGATTCAAACCTATTCGGCAACAATGTTTCCACCTT...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS-3UTR CAA 90 bp ACACCATTGTTCATGGGCCTTATGAGCTGTGCTACAATAACTGTTTTCCACAGTCACGTTATTCTTCTTTaGAAACAGCTCAACAATTCC +
Preference number: 5 (lower is better)
Translates to: TPLFMGLMSCATITVFHSHVILL*KQLNNS
Trigger: GGAATTGTTGAGCTGTTTCAAAAGAAGAATAACGTG...ACTGTGGAAAACAGTTATTGTAGCACAGCTCATAAGGCCCATGAACAATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 90 bp TGCGACTGTTCCAGAAGTTCAATGGCTGCTCTTCTTGCTTCTAAGTaGGTAGATAATTCCTCCATCCCTTTTAATTGTTCATTTCTTAAC +
Preference number: 5 (lower is better)
Translates to: CDCSRSSMAALLASK*VDNSSIPFNCSFLN
Trigger: GTTAAGAAATGAACAATTAAAAGGGATGGAGGAATTATCTACTCACTTAGAAGCAAGAAGAGCAGCCATTGAACTTCTGGAACAGTCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 90 bp CTTATGTCATCTTTAATAATCTTCTGTCCCACTGAAGATGTATTTTaGTTGATGGATTTCGCTAAAGCAGAAGCCTTCTTTAACGCACCG +
Preference number: 5 (lower is better)
Translates to: LMSSLIIFCPTEDVF*LMDFAKAEAFFNAP
Trigger: CGGTGCGTTAAAGAAGGCTTCTGCTTTAGCGAAATCCATCAAGCAAAATACATCTTCAGTGGGACAGAAGATTATTAAAGATGACATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 90 bp TTCCTGATTATCTCATCACGCAAGCGTTTGGATTTTTCAATTTTCTaGATCAAAGTTTGTGCATTGAGCAGAGTGCTTTCTGGTGACATA +
Preference number: 5 (lower is better)
Translates to: FLIISSRKRLDFSIF*IKVCALSRVLSGDI
Trigger: TATGTCACCAGAAAGCACTCTGCTCAATGCACAAACTTTGATTCAGAAAATTGAAAAATCCAAACGCTTGCGTGATGAGATAATCAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 90 bp AACTTATCCTCTTCCTCAATTTCGTGTAATTGTCTCCATAAAGCCTaGTATCTATCGATCAGATGTGTGGATTCTTTGATTGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NLSSSSISCNCLHKA*YLSIRCVDSLIVSS
Trigger: AGAAGAGACAATCAAAGAATCCACACATCTGATCGATAGATACCAGGCTTTATGGAGACAATTACACGAAATTGAGGAAGAGGATAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp ACTCCAGGAGGACCTGGCGGTCGGCCTCTGGGCTGGTaGCATGCGCCTTCTGCCTGCGGCTCTCTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: TPGGPGGRPLGW*HAPSACGSLLS
Trigger: CGACAGCAGAGAGCCGCAGGCAGAAGGCGCATGTCACCAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp AGGAGGACCTGGCGGTCGGCCTCTGGGCTGGTGACATaGGCCTTCTGCCTGCGGCTCTCTGCTGTCGCTAGC +
Preference number: 6 (lower is better)
Translates to: RRTWRSASGLVT*AFCLRLSAVAS
Trigger: GCTAGCGACAGCAGAGAGCCGCAGGCAGAAGGCGCATGTCACCAGCCCAGAGGCCGACCGCCAGGTCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp GGCACCCTCGTCTGTTTGGCTGAGCCTCGGGGATGGTaGTGGTCCTTCCTCGGTGCTTCCCGAGTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: GTLVCLAEPRGW*WSFLGASRVWG
Trigger: GCCCCAGACTCGGGAAGCACCGAGGAAGGACCAGCACCATCCCCGAGGCTCAGCCAAACAGACGAGGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CTCCTCCTGACTCGCCCACGGCTGCCGACTCCCGAGTaGGCTTGGGCACCTCAGAAGTGGCCGGCATCTCTT +
Preference number: 6 (lower is better)
Translates to: LLLTRPRLPTPE*AWAPQKWPASL
Trigger: AAGAGATGCCGGCCACTTCTGAGGTGCCCAAGCCCACTCGGGAGTCGGCAGCCGTGGGCGAGTCAGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CGGGCTCCTCCTGACTCGCCCACGGCTGCCGACTCCCGAGTGGGCTaGGGCACCTCAGAAGTGGCCGGCATCTCTTCAACTGGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: RAPPDSPTAADSRVG*GTSEVAGISSTGRE
Trigger: TTCTCTGCCAGTTGAAGAGATGCCGGCCACTTCTGAGGTGCCCAAGCCCACTCGGGAGTCGGCAGCCGTGGGCGAGTCAGGAGGAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GGGAGGGCGGGCGGTGCAGCTTTCATTAGGTCTTTCTaGCACTCCAGGAGGACCTGGCGGTCGGCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GRAGGAAFIRSF*HSRRTWRSASG
Trigger: CCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTGTCAGAAAGACCTAATGAAAGCTGCACCGCCCGCCCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132161.2
CDS GCA 72 bp GTAGCTGCGGCTGTGCTCAAGGCCGGCCTTCAGGGATaGGTCCCTCCAGGCAGCTCTGCTCTGCACACTCTC +
Preference number: 6 (lower is better)
Translates to: VAAAVLKAGLQG*VPPGSSALHTL
Trigger: GAGAGTGTGCAGAGCAGAGCTGCCTGGAGGGACGCATCCCTGAAGGCCGGCCTTGAGCACAGCCGCAGCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CTGACTCGCCCACGGCTGCCGACTCCCGAGTGGGCTTaGGCACCTCAGAAGTGGCCGGCATCTCTTCAACTG +
Preference number: 6 (lower is better)
Translates to: LTRPRLPTPEWA*APQKWPASLQL
Trigger: CAGTTGAAGAGATGCCGGCCACTTCTGAGGTGCCCAAGCCCACTCGGGAGTCGGCAGCCGTGGGCGAGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CCGTGTCTTGCAGCTGCTGCTGGGATGCCTTCAGGATaGCGAGGCGACGTTCCAGCTCGGCTTCCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: PCLAAAAGMPSG*RGDVPARLPWR
Trigger: CCTCCACGGAAGCCGAGCTGGAACGTCGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GCCGAGAGTGCGCTCTCCGTGTCTTGCAGCTGCTGCTaGGATGCCTTCAGGATGGCGAGGCGACGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: AESALSVSCSCC*DAFRMARRRSS
Trigger: GCTGGAACGTCGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCACTCTCGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TTTCTGACACTCCAGGAGGACCTGGCGGTCGGCCTCTaGGCTGGTGACATGCGCCTTCTGCCTGCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: FLTLQEDLAVGL*AGDMRLLPAAL
Trigger: GAGAGCCGCAGGCAGAAGGCGCATGTCACCAGCCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTGTCAGAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp CCTGACTCGCCCACGGCTGCCGACTCCCGAGTGGGCTaGGGCACCTCAGAAGTGGCCGGCATCTCTTCAACT +
Preference number: 6 (lower is better)
Translates to: PDSPTAADSRVG*GTSEVAGISST
Trigger: AGTTGAAGAGATGCCGGCCACTTCTGAGGTGCCCAAGCCCACTCGGGAGTCGGCAGCCGTGGGCGAGTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CCAGACCGCTCATGTCCCAGAGCCGGAGGCACAAGGTaGCACAGTGACTGGGGAGATGTGGGCTCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: PDRSCPRAGGTR*HSDWGDVGSSL
Trigger: GAGCGAGGAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGCTCTGGGACATGAGCGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp TGTGGGAGGTCAGGCGGCGGTGGAAGCGAGACACTCTaGCGAACACCTCCTGACAGTAGCGGTGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: CGRSGGGGSETL*RTPPDSSGAAP
Trigger: AGGAGCTGCACCGCTACTGTCAGGAGGTGTTCGGCAGAGTGTCTCGCTTCCACCGCCGCCTGACCTCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp TGTGGCACCCTCGTCTGTTTGGCTGAGCCTCGGGGATaGTGCTGGTCCTTCCTCGGTGCTTCCCGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: CGTLVCLAEPRG*CWSFLGASRVW
Trigger: CCAGACTCGGGAAGCACCGAGGAAGGACCAGCACCATCCCCGAGGCTCAGCCAAACAGACGAGGGTGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GTTGCAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTaGAGACACGGAGGATGTCTGCAGGCCGAGGCCTAC +
Preference number: 6 (lower is better)
Translates to: VAATAPAWPLGS*RHGGCLQAEAY
Trigger: GTAGGCCTCGGCCTGCAGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GCCTGGCACCCCGCCAGCTCCTCTTCCACCACCTGTTaGATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: AWHPASSSSTTC*MSASTVSGSKA
Trigger: GGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAACAGGTGGTGGAAGAGGAGCTGGCGGGGTGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AAGGCGTCATCCAGTTGGGCTCTCCACGCAGCGACCTaGTGCATGAGGCTGGTCCAGCCTTGTCTCAGCCGT +
Preference number: 6 (lower is better)
Translates to: KASSSWALHAAT*CMRLVQPCLSR
Trigger: ACGGCTGAGACAAGGCTGGACCAGCCTCATGCACCAGGTCGCTGCGTGGAGAGCCCAACTGGATGACGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 72 bp ACCCTCGTCTGTTTGGCTGAGCCTCGGGGATGGTGCTaGTCCTTCCTCGGTGCTTCCCGAGTCTGGGGCAAT +
Preference number: 6 (lower is better)
Translates to: TLVCLAEPRGWC*SFLGASRVWGN
Trigger: ATTGCCCCAGACTCGGGAAGCACCGAGGAAGGACCAGCACCATCCCCGAGGCTCAGCCAAACAGACGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TCAGACGCCTCCTTCTCATCATCTAAGCCCGGGGTGTaGGAGGTCAGGCGGCGGTGGAAGCGAGACACTCTG +
Preference number: 6 (lower is better)
Translates to: SDASFSSSKPGV*EVRRRWKRDTL
Trigger: CAGAGTGTCTCGCTTCCACCGCCGCCTGACCTCCCACACCCCGGGCTTAGATGATGAGAAGGAGGCGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp TGCCCGCCGCCTGAGGCTCCACGGCGTTCATCCAGCTaGTCATCTCGGAGATTGCTTCTCGGGACGGCAATT +
Preference number: 6 (lower is better)
Translates to: CPPPEAPRRSSS*SSRRLLLGTAI
Trigger: AATTGCCGTCCCGAGAAGCAATCTCCGAGATGATCAGCTGGATGAACGCCGTGGAGCCTCAGGCGGCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp AGCCCAGGGGTGCTGCGCTCCTCAGGCTGTGGCAGCTaGTCCGAGAGGGTAGAATTTTCCAGGAAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: SPGVLRSSGCGS*SERVEFSRKAS
Trigger: AGAGGCCTTCCTGGAAAATTCTACCCTCTCGGATCAGCTGCCACAGCCTGAGGAGCGCAGCACCCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp CTCATGTCCCAGAGCCGGAGGCACAAGGTGACACAGTaGCTGGGGAGATGTGGGCTCCTCGCTCTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LMSQSRRHKVTQ*LGRCGLLALSP
Trigger: AGGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGGCTCTGGGACATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp AGGGCCTCAAGGTTCTGCACCTGGCAGGCCAAGGCCTaGAACGATAAGACCGCAGGCTTGCTGTGCTCCATG +
Preference number: 6 (lower is better)
Translates to: RASRFCTWQAKA*NDKTAGLLCSM
Trigger: CATGGAGCACAGCAAGCCTGCGGTCTTATCGTTGCAGGCCTTGGCCTGCCAGGTGCAGAACCTTGAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp GCCTGGATCAGCTCCCACCTGTCGAAGGCACCTGGCTaGTGTCCCGTTAAAGTGGCCAGCTGCTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: AWISSHLSKAPG*CPVKVASCSSS
Trigger: GGAAGATGAGCAGCTGGCCACTTTAACGGGACAGCAGCCAGGTGCCTTCGACAGGTGGGAGCTGATCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp CTTGCAGAGTTAGCCAGACCAGAGCATCCCTTACCTTaGCCTGTGTGGAATCCCCGGGGCCAGGCGCATCCT +
Preference number: 6 (lower is better)
Translates to: LAELARPEHPLP*PVWNPRGQAHP
Trigger: AGGATGCGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAAGGGATGCTCTGGTCTGGCTAACTCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 72 bp TCTCCCACAGAGCGGAGGCCACCCCAAGCGCGCATGTaGCATCGTTTTCTGTGCTCCTGCATCTCAGGTGTC +
Preference number: 6 (lower is better)
Translates to: SPTERRPPQARM*HRFLCSCISGV
Trigger: GACACCTGAGATGCAGGAGCACAGAAAACGATGCCACATGCGCGCTTGGGGTGGCCTCCGCTCTGTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TCTTGCAGAGTTAGCCAGACCAGAGCATCCCTTACCTaGGCCTGTGTGGAATCCCCGGGGCCAGGCGCATCC +
Preference number: 6 (lower is better)
Translates to: SCRVSQTRASLT*ACVESPGPGAS
Trigger: GGATGCGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAAGGGATGCTCTGGTCTGGCTAACTCTGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp TTGATGCTTTCCGGAGACAAGCAAGCCTCGTGCTCCTaGCGGAGGCCCCTGGTCCTGCCTCTCCGGATAAGC +
Preference number: 6 (lower is better)
Translates to: LMLSGDKQASCS*RRPLVLPLRIS
Trigger: GCTTATCCGGAGAGGCAGGACCAGGGGCCTCCGCAAGGAGCACGAGGCTTGCTTGTCTCCGGAAAGCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTGCCCTCGGGCCTCCTGCAACTGGTCTGCGAGGTCTaGGTTCACTTGGGTCCACCTCGAATGAGCATCCTG +
Preference number: 6 (lower is better)
Translates to: LPSGLLQLVCEV*VHLGPPRMSIL
Trigger: CAGGATGCTCATTCGAGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAGTTGCAGGAGGCCCGAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp AAAGGCCACGTTGGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACTaGGGTCTTGCAGACACGGAGGATGTCTGCAGGCCGAGGCCTACT +
Preference number: 6 (lower is better)
Translates to: KGHVGLLQPQLQLGH*GLADTEDVCRPRPT
Trigger: AGTAGGCCTCGGCCTGCAGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TCTGGCTCAAAGGCCACGTTGGCTTGTTGCAGCCACAGCTCCAGCTaGGCCACTTGGGTCTTGCAGACACGGAGGATGTCTGCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: SGSKATLACCSHSSS*ATWVLQTRRMSAGR
Trigger: TCGGCCTGCAGACATCCTCCGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TCTCCCAGGCCCTGGTCTTTGCACGTCTCTAGCAGAGAGGCGACCTaGTACTCAATCTCTGTCAGCATAGCCTGGCACCCCGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SPRPWSLHVSSREAT*YSISVSIAWHPASS
Trigger: GGAGCTGGCGGGGTGCCAGGCTATGCTGACAGAGATTGAGTACAAGGTCGCCTCTCTGCTAGAGACGTGCAAAGACCAGGGCCTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GAGCTGCAGCTGCCCTCGGGCCTCCTGCAACTGGTCTGCGAGGTCTaGGTTCACTTGGGTCCACCTCGAATGAGCATCCTGGCATTTCTC +
Preference number: 6 (lower is better)
Translates to: ELQLPSGLLQLVCEV*VHLGPPRMSILAFL
Trigger: GAGAAATGCCAGGATGCTCATTCGAGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAGTTGCAGGAGGCCCGAGGGCAGCTGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp TCGTTGATCTTGCTGAGCTTCTCCTCCAGCTCAGCCGCCTTGGCCTaGCTGCTGGCCTTGATCAGCTGGTCGCCCATCTGCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SLILLSFSSSSAALA*LLALISWSPICFSC
Trigger: GCAGCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGCCAAGGCGGCTGAGCTGGAGGAGAAGCTCAGCAAGATCAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp CATCCAGTTGGGCTCTCCACGCAGCGACCTGGTGCATaGGGCTGGTCCAGCCTTGTCTCAGCCGTGATTCAT +
Preference number: 6 (lower is better)
Translates to: HPVGLSTQRPGA*GWSSLVSAVIH
Trigger: ATGAATCACGGCTGAGACAAGGCTGGACCAGCCTCATGCACCAGGTCGCTGCGTGGAGAGCCCAACTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp CTGTCCCACTGGTTGCTGAGGTCCGTAAAGGTCTCTTaGGCCAGCGGGGCCTCACAGTGTTCCGCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: LSHWLLRSVKVS*ASGASQCSACL
Trigger: GAGACAAGCGGAACACTGTGAGGCCCCGCTGGCTCAAGAGACCTTTACGGACCTCAGCAACCAGTGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTGCCGAGCTGCTCTTTGGCATCCTGCTCCAGCTCTTaGCGGAGCGGGAGAAGTCCACCATGCAGGATGCAC +
Preference number: 6 (lower is better)
Translates to: LPSCSLASCSSS*RSGRSPPCRMH
Trigger: GTGCATCCTGCATGGTGGACTTCTCCCGCTCCGTCAAGAGCTGGAGCAGGATGCCAAAGAGCAGCTCGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CGGTCTCGGTGCCTTCGGGAATGTTCTGGATACTCCTaGCACGCTGTAGAAGCAGGGCCAGCAGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: RSRCLRECSGYS*HAVEAGPAAAA
Trigger: AGCAGCTGCTGCTGGCCCTGCTTCTACAGCGTGTCAGGAGTATCCAGAACATTCCCGAAGGCACCGAGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp AGAAAGGCCAGCTGGCTGGTCGACGTCGTGGGGCTCTaGCGGTTTCTTAAGAGTGGAGGGATGCTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: RKASWLVDVVGL*RFLKSGGMLVL
Trigger: GAGGACCAGCATCCCTCCACTCTTAAGAAACCGTCAGAGCCCCACGACGTCGACCAGCCAGCTGGCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TCCTCGATCAGGACGGCGTCGAGGGGCTCACTCTTCTaGATGAGCTGCTCCCCAAACACGATGAGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: SSIRTASRGSLF*MSCSPNTMSWS
Trigger: CGACCAGCTCATCGTGTTTGGGGAGCAGCTCATTCAGAAGAGTGAGCCCCTCGACGCCGTCCTGATCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp TGCTCGGCTCTCAAGATGGAGACCTCCAGCTCCTTCTaGGCTTCCTCCACCTTTAGCCCCAGGTCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: CSALKMETSSSF*ASSTFSPRSSS
Trigger: GGAGCTAGACCTGGGGCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GCCAGCAGCAGCTGCTGCTTCTCCACACTCTCCTGGTaGTGGCACAGAGAGTCCAACAACTGCCAGAGTTCC +
Preference number: 6 (lower is better)
Translates to: ASSSCCFSTLSW*WHRESNNCQSS
Trigger: GGAACTCTGGCAGTTGTTGGACTCTCTGTGCCAGCACCAGGAGAGTGTGGAGAAGCAGCAGCTGCTGCTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GAGGCGACCTTGTACTCAATCTCTGTCAGCATAGCCTaGCACCCCGCCAGCTCCTCTTCCACCACCTGTTGC +
Preference number: 6 (lower is better)
Translates to: EATLYSISVSIA*HPASSSSTTCC
Trigger: GCAACAGGTGGTGGAAGAGGAGCTGGCGGGGTGCCAGGCTATGCTGACAGAGATTGAGTACAAGGTCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CCGGAGGCACAAGGTGACACAGTGACTGGGGAGATGTaGGCTCCTCGCTCTCTCTCCTCTTACGCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: PEAQGDTVTGEM*APRSLSSYAKS
Trigger: ACTCTTGGCGTAAGAGGAGAGAGAGCGAGGAGCCCACATCTCCCCAGTCACTGTGTCACCTTGTGCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp GCTGTCCCACTGGTTGCTGAGGTCCGTAAAGGTCTCTaGAGCCAGCGGGGCCTCACAGTGTTCCGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: AVPLVAEVRKGL*SQRGLTVFRLS
Trigger: AGACAAGCGGAACACTGTGAGGCCCCGCTGGCTCAAGAGACCTTTACGGACCTCAGCAACCAGTGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GGAGACAAGGCATTCAGGAGGGACTCAGTCATCCCCATCTGGGTCTaGGCCTGGTCCAGATCCTCTCTCAGCTCAGCTGTGCTCCCACTG +
Preference number: 6 (lower is better)
Translates to: GDKAFRRDSVIPIWV*AWSRSSLSSAVLPL
Trigger: CAGTGGGAGCACAGCTGAGCTGAGAGAGGATCTGGACCAGGCCAAGACCCAGATGGGGATGACTGAGTCCCTCCTGAATGCCTTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GTGGAGCGTGCTGTCCCACTGGTTGCTGAGGTCCGTAAAGGTCTCTaGAGCCAGCGGGGCCTCACAGTGTTCCGCTTGTCTCATTACCAT +
Preference number: 6 (lower is better)
Translates to: VERAVPLVAEVRKGL*SQRGLTVFRLSHYH
Trigger: ATGGTAATGAGACAAGCGGAACACTGTGAGGCCCCGCTGGCTCAAGAGACCTTTACGGACCTCAGCAACCAGTGGGACAGCACGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTGCAGACACG +
Preference number: 6 (lower is better)
Translates to: HVRVYSFWLKGHVGL*QPQLQLGHLGLADT
Trigger: CGTGTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CTGAGCTTCTCCTCCAGCTCAGCCGCCTTGGCCTTGCTGCTGGCCTaGATCAGCTGGTCGCCCATCTGCTTCAGCTGCAGTTTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: LSFSSSSAALALLLA*ISWSPICFSCSLFS
Trigger: AGAAAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGCCAAGGCGGCTGAGCTGGAGGAGAAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp TATGTCCTTCAGCCACGCTTCGGTCTCTTTGAGCGGTaGAGGCAAGGCGTCATCCAGTTGGGCTCTCCACGC +
Preference number: 6 (lower is better)
Translates to: YVLQPRFGLFER*RQGVIQLGSPR
Trigger: GCGTGGAGAGCCCAACTGGATGACGCCTTGCCTTCACCGCTCAAAGAGACCGAAGCGTGGCTGAAGGACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp TCTGGAAGAACACCTGCTGGGCACATGCATCCTCTCTaGGTAACCCAGGTCTCTGCAGCAGCCCCTCCACAC +
Preference number: 6 (lower is better)
Translates to: SGRTPAGHMHPL*VTQVSAAAPPH
Trigger: GTGTGGAGGGGCTGCTGCAGAGACCTGGGTTACTCAGAGAGGATGCATGTGCCCAGCAGGTGTTCTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GCTACCAACTCCTTTTCTAGGCGCATTAGGTCTTTCTaGCACTCCAGGAGGACCTGGCGGTCGGCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ATNSFSRRIRSF*HSRRTWRSASG
Trigger: CCCAGAGGCCGACCGCCAGGTCCTCCTGGAGTGTCAGAAAGACCTAATGCGCCTAGAAAAGGAGTTGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp AGGAATCCACCAGGGCGCTCTCTTTGCCCGAGTAACTaGTCGGCTCTCAAGATGGAGACCTCCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RNPPGRSLCPSN*SALKMETSSSF
Trigger: GAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGCGCCCTGGTGGATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CCTGCAGTTCTGCCAGTTTACTCTGCAGGCAGGCGCTaGTCCTCTCCTGCTCACTGGCAAAGTCAGACGTCA +
Preference number: 6 (lower is better)
Translates to: PAVLPVYSAGRR*SSPAHWQSQTS
Trigger: TGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGAACTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TCAGCCAGTAAGACCTGCAGTTCTGCCAGTTTACTCTaGAGGCAGGCGCTGCTCCTCTCCTGCTCACTGGCA +
Preference number: 6 (lower is better)
Translates to: SASKTCSSASLL*RQALLLSCSLA
Trigger: TGCCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGAACTGCAGGTCTTACTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GAATCCTGGAGCTGCTGGAGAAGGCTCTCATGCAGGTaGTTCACTTCTAGCCACGGCTCCTCGCTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: ESWSCWRRLSCR*FTSSHGSSLKL
Trigger: CAGCTTCAGCGAGGAGCCGTGGCTAGAAGTGAAGCACCTGCATGAGAGCCTTCTCCAGCAGCTCCAGGATTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGCACAGAATCCTGGAGCTGCTGGAGAAGGCTCTCATaGAGGTGCTTCACTTCTAGCCACGGCTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: CTESWSCWRRLS*RCFTSSHGSSL
Trigger: CAGCGAGGAGCCGTGGCTAGAAGTGAAGCACCTGCATGAGAGCCTTCTCCAGCAGCTCCAGGATTCTGTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GGAGGCTGGATAAATGTGCCCACTCGGTGCGAAGCTTaGTCAGTGAGCCTTGCTGGTTTTCCACGGACCCCA +
Preference number: 6 (lower is better)
Translates to: GGWINVPTRCEA*SVSLAGFPRTP
Trigger: TGGGGTCCGTGGAAAACCAGCAAGGCTCACTGAGCAAGCTTCGCACCGAGTGGGCACATTTATCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AGCATCCCTCTCGGCCACTGTACACTCGGAGGCGCCTaGAGAGGGCTTGTCTCCTACTTCTTGCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SIPLGHCTLGGA*RGLVSYFLLFL
Trigger: CAAGAACAGCAAGAAGTAGGAGACAAGCCCTCTGCAGGCGCCTCCGAGTGTACAGTGGCCGAGAGGGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GAGCTGTCACAGGTGCTAATTCTCCCATCTGCATCCTaGACGATGGTGGCTGAGGAGGAGGAGGATGCCCCA +
Preference number: 6 (lower is better)
Translates to: ELSQVLILPSAS*TMVAEEEEDAP
Trigger: TGGGGCATCCTCCTCCTCCTCAGCCACCATCGTGCAGGATGCAGATGGGAGAATTAGCACCTGTGACAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AGCTCCTGGTCGATTCTCTTGTTGAGGGACAGCCATTaGTCTTCCAGCCTCGCGATCTGGCCCTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SSWSILLLRDSH*SSSLAIWPSGS
Trigger: TGAGCCAGAGGGCCAGATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp TCACACTTCCTCTGCCGAACACCCCGGGCGGCCCTCTaGCATTGGTCTGACAGCTTGGAGAATTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: SHFLCRTPRAAL*HWSDSLENSET
Trigger: TGTCTCTGAATTCTCCAAGCTGTCAGACCAATGGCAGAGGGCCGCCCGGGGTGTTCGGCAGAGGAAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp CACACTGCTCCTGAGCCCACTGCAGAAGAGCCTTCTTaGCAGACCACTGCCATCTTGCCTGAGCTTGAGCCT +
Preference number: 6 (lower is better)
Translates to: HTAPEPTAEEPS*QTTAILPELEP
Trigger: AGGCTCAAGCTCAGGCAAGATGGCAGTGGTCTGCCAAGAAGGCTCTTCTGCAGTGGGCTCAGGAGCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CCA 72 bp GCTCTCTTTGCCCGAGTAACTGCTCGGCTCTCAAGATaGAGACCTCCAGCTCCTTCTGCGCTTCCTCCACCT +
Preference number: 6 (lower is better)
Translates to: ALFARVTARLSR*RPPAPSALPPP
Trigger: AGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGCAGCAGCTGCTGCTTCTCCACACTCTCCTGGTGCTaGCACAGAGAGTCCAACAACTGCCAGAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSSCCFSTLSWC*HRESNNCQSSS
Trigger: CGAGGAACTCTGGCAGTTGTTGGACTCTCTGTGCCAGCACCAGGAGAGTGTGGAGAAGCAGCAGCTGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AAAGCTGGCTTGTCCTCTGAAACACAGGCAGGGGCTTaGTTCCCGTCTGGGGCAGCCTCAGTTCCACTTGGT +
Preference number: 6 (lower is better)
Translates to: KAGLSSETQAGA*FPSGAASVPLG
Trigger: ACCAAGTGGAACTGAGGCTGCCCCAGACGGGAACCAAGCCCCTGCCTGTGTTTCAGAGGACAAGCCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GGATGGTGCTGGTCCTTCCTCGGTGCTTCCCGAGTCTaGGGCAATGATATGCACCATGGAGCTGTCACAGGT +
Preference number: 6 (lower is better)
Translates to: GWCWSFLGASRV*GNDMHHGAVTG
Trigger: ACCTGTGACAGCTCCATGGTGCATATCATTGCCCCAGACTCGGGAAGCACCGAGGAAGGACCAGCACCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AACAGTCCTGCTCCTTCACTGCAGACAGTAGTTGGCTaGTGTCGGCGAGGAACCGCAGCAAGTCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: NSPAPSLQTVVG*CRRGTAASPPQ
Trigger: CTGTGGAGGACTTGCTGCGGTTCCTCGCCGACACCAGCCAACTACTGTCTGCAGTGAAGGAGCAGGACTGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp CTCCTCTTCCTCTTCCAAGAAGGTCCAGCGGGGCCTTaGACTCTTTGCAAAGGCTGCTGGGAGCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LLFLFQEGPAGP*TLCKGCWELFS
Trigger: GGAGAACAGCTCCCAGCAGCCTTTGCAAAGAGTCCAAGGCCCCGCTGGACCTTCTTGGAAGAGGAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS CAA 72 bp CTCCAGGAGGCAGGTGAGTTCGCTGTGTTCTGTGGCTaGCTGGAAACACTTCCTGTGAGCCAGCTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: LQEAGEFAVFCG*LETLPVSQLLH
Trigger: GTGGAGCAGCTGGCTCACAGGAAGTGTTTCCAGCAAGCCACAGAACACAGCGAACTCACCTGCCTCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp ATTGCCGAGCTGCTCTTTGGCATCCTGCTCCAGCTCTaGACGGAGCGGGAGAAGTCCACCATGCAGGATGCA +
Preference number: 6 (lower is better)
Translates to: IAELLFGILLQL*TEREKSTMQDA
Trigger: TGCATCCTGCATGGTGGACTTCTCCCGCTCCGTCAAGAGCTGGAGCAGGATGCCAAAGAGCAGCTCGGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTGGCTaGTTGCAGCCACAGCTCCAGCTTGGCCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: RVYSFWLKGHVG*LQPQLQLGHLG
Trigger: ACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGGGTTTGCAGTCGGTGGAGCTCCTGGTCGATTCTCTaGTTGAGGGACAGCCATTGCTCTTCCAGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: RVCSRWSSWSIL*LRDSHCSSSLA
Trigger: CGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCTCCACCGACTGCAAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp ATGACGTCAAAGAGATGCTGCCAGCGGTCGTTGATCTaGCTGAGCTTCTCCTCCAGCTCAGCCGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MTSKRCCQRSLI*LSFSSSSAALA
Trigger: GGCCAAGGCGGCTGAGCTGGAGGAGAAGCTCAGCAAGATCAACGACCGCTGGCAGCATCTCTTTGACGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp CCTCTTCCAAGAAGGTCCAGCGGGGCCTTGGACTCTTaGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: PLPRRSSGALDS*QRLLGAVLLSP
Trigger: TGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGAGTCCAAGGCCCCGCTGGACCTTCTTGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS CAA 90 bp CTGGAGCTTCTCCAGGAGGCAGGTGAGTTCGCTGTGTTCTGTGGCTaGCTGGAAACACTTCCTGTGAGCCAGCTGCTCCACAAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: LELLQEAGEFAVFCG*LETLPVSQLLHKFP
Trigger: TGGGAACTTGTGGAGCAGCTGGCTCACAGGAAGTGTTTCCAGCAAGCCACAGAACACAGCGAACTCACCTGCCTCCTGGAGAAGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp ATTTGTAAGTTCTTGAAGATGGGCCGAGAGTGCGCTCTCCGTGTCTaGCAGCTGCTGCTGGGATGCCTTCAGGATGGCGAGGCGACGTTC +
Preference number: 6 (lower is better)
Translates to: ICKFLKMGRECALRV*QLLLGCLQDGEATF
Trigger: GAACGTCGCCTCGCCATCCTGAAGGCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCACTCTCGGCCCATCTTCAAGAACTTACAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TTGCATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTGGCTaGTTGCAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: LHVRVYSFWLKGHVG*LQPQLQLGHLGLAD
Trigger: GTCTGCAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp ACCTGTTGCATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTaGGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACTTGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: TCCMSASTVSGSKAT*ACCSHSSSLATWVL
Trigger: CAAGACCCAAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TGCTTAAGAAGGGTTTGCAGTCGGTGGAGCTCCTGGTCGATTCTCTaGTTGAGGGACAGCCATTGCTCTTCCAGCCTCGCGATCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CLRRVCSRWSSWSIL*LRDSHCSSSLAIWP
Trigger: GGGCCAGATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCTCCACCGACTGCAAACCCTTCTTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 90 bp GCCCTGGACCGAGTCCCAGGACAGGCTCAGCTGATGGAGTCTATTTaGGAGTTCTGTGGCTTCGGGGCTCTGGCTTGGCAGATATTCCTT +
Preference number: 6 (lower is better)
Translates to: ALDRVPGQAQLMESI*EFCGFGALAWQIFL
Trigger: AAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATAGACTCCATCAGCTGAGCCTGTCCTGGGACTCGGTCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp CCTCCTCTTCCTCTTCCAAGAAGGTCCAGCGGGGCCTTGGACTCTTaGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAA +
Preference number: 6 (lower is better)
Translates to: PPLPLPRRSSGALDS*QRLLGAVLLSPPHQ
Trigger: TTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGAGTCCAAGGCCCCGCTGGACCTTCTTGGAAGAGGAAGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044217.16
CDS TCA 72 bp CTCACCACGGCTTCCACCAGGCTCTGCTGCCATAGCTaGCTCCTTAGACAGACTCGTTCCAGAACTGTTCCC +
Preference number: 6 (lower is better)
Translates to: LTTASTRLCCHS*LLRQTRSRTVP
Trigger: GGGAACAGTTCTGGAACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAGCCTGGTGGAAGCCGTGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TCTTGCGCCTGTCCTGGGTCCTGCTCGACGAAGTCCTaGACTTCAGAGTCCAGCTCGTTCAGCTTGGAATGC +
Preference number: 6 (lower is better)
Translates to: SCACPGSCSTKS*TSESSSFSLEC
Trigger: GCATTCCAAGCTGAACGAGCTGGACTCTGAAGTTCAGGACTTCGTCGAGCAGGACCCAGGACAGGCGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CTGCAGAAGATGTTTCACCTGAGACGCAGAACTCTTTaGGAGCTCGGTATCCTTGCCCGCCGCCTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LQKMFHLRRRTL*ELGILARRLRL
Trigger: GAGCCTCAGGCGGCGGGCAAGGATACCGAGCTCTCAAAGAGTTCTGCGTCTCAGGTGAAACATCTTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp CTGCCGAACACCCCGGGCGGCCCTCTGCCATTGGTCTaGCAGCTTGGAGAATTCAGAGACAAATTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: LPNTPGGPLPLV*QLGEFRDKFWS
Trigger: AGACCAGAATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATGGCAGAGGGCCGCCCGGGGTGTTCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp CACACTGAAGGTCTGGCGGCGGGCAGAACCAAGGCTTaGTCTTCTGTTTGGTTGAGATGCTGCGACTGTTCC +
Preference number: 6 (lower is better)
Translates to: HTEGLAAGRTKA*SSVWLRCCDCS
Trigger: GGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCGCCAGACCTTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TGTTCAAGGTGCTTCATTTGGCTCTCCACCAGCTTCTaGTCTGCGGCCGCCAGGAGGCTGGATAAATGTGCC +
Preference number: 6 (lower is better)
Translates to: CSRCFIWLSTSF*SAAARRLDKCA
Trigger: GGCACATTTATCCAGCCTCCTGGCGGCCGCAGACCAGAAGCTGGTGGAGAGCCAAATGAAGCACCTTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGAAAACTCACACTTGATTGCCTGGAGCTCAGCGGCTaGAGTGACCATGTCCACGATCGCCGCCTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: RKLTLDCLELSG*SDHVHDRRLLS
Trigger: GGACAACAGGCGGCGATCGTGGACATGGTCACTCCAGCCGCTGAGCTCCAGGCAATCAAGTGTGAGTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CTCCGCAGCTCCTCAAACTGTTCTGCCCGTTCTGGGTaGCCTTCCGGTGCCAAGTTTGGGAAAGAAGTTGAG +
Preference number: 6 (lower is better)
Translates to: LRSSSNCSARSG*PSGAKFGKEVE
Trigger: CTCAACTTCTTTCCCAAACTTGGCACCGGAAGGCCACCCAGAACGGGCAGAACAGTTTGAGGAGCTGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGGCTGTGTTTCTGCTCAGAATCTTCCAGAGCCATCTaGAGGGTGCTGGCGCGGTGGCTAAGGGTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: RLCFCSESSRAI*RVLARWLRVLE
Trigger: TTCAAGGACCCTTAGCCACCGCGCCAGCACCCTCCAGATGGCTCTGGAAGATTCTGAGCAGAAACACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTTaGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACTT +
Preference number: 6 (lower is better)
Translates to: CPRLQFLAQRPR*LVAATAPAWPL
Trigger: AAGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GAGGGAAACGGAGCCTCTCCCCTTCGTCTCTCAGTTTaGCGACTTGCTTCTCAGAGTTCTGCAGCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: EGNGASPLRLSV*RLASQSSAALL
Trigger: CAGCAGAGCTGCAGAACTCTGAGAAGCAAGTCGCCAAACTGAGAGACGAAGGGGAGAGGCTCCGTTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GAGGCTCTCAGTGTGGCCGTGTCTGCCTCTTTCAGGTaGAGAAGTTGGTTCCCAGTACTCATGACTGCGGAC +
Preference number: 6 (lower is better)
Translates to: EALSVAVSASFR*RSWFPVLMTAD
Trigger: GTCCGCAGTCATGAGTACTGGGAACCAACTTCTCCACCTGAAAGAGGCAGACACGGCCACACTGAGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 72 bp ATCTTTCTATTCAGGGTTCCGTGCACTCGCTGCCACTaGCGGTTCATCTCCCCGAGGTGCTCAGCAAACTCC +
Preference number: 6 (lower is better)
Translates to: IFLFRVPCTRCH*RFISPRCSANS
Trigger: GGAGTTTGCTGAGCACCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAACCCTGAATAGAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 72 bp ACCTGTCGAAGGCACCTGGCTGCTGTCCCGTTAAAGTaGCCAGCTGCTCATCTTCCTGCTGAGCCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: TCRRHLAAVPLK*PAAHLPAEPPL
Trigger: TAAAGGAGGCTCAGCAGGAAGATGAGCAGCTGGCCACTTTAACGGGACAGCAGCCAGGTGCCTTCGACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp ATGTCCGCGTCTACAGTTTCTGGCTCAAAGGCCACGTaGGCTTGTTGCAGCCACAGCTCCAGCTTGGCCACT +
Preference number: 6 (lower is better)
Translates to: MSASTVSGSKAT*ACCSHSSSLAT
Trigger: AGTGGCCAAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CCCTGGTCTTTGCACGTCTCTAGCAGAGAGGCGACCTaGTACTCAATCTCTGTCAGCATAGCCTGGCACCCC +
Preference number: 6 (lower is better)
Translates to: PWSLHVSSREAT*YSISVSIAWHP
Trigger: GGGGTGCCAGGCTATGCTGACAGAGATTGAGTACAAGGTCGCCTCTCTGCTAGAGACGTGCAAAGACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GTTTGCAGTCGGTGGAGCTCCTGGTCGATTCTCTTGTaGAGGGACAGCCATTGCTCTTCCAGCCTCGCGATC +
Preference number: 6 (lower is better)
Translates to: VCSRWSSWSILL*RDSHCSSSLAI
Trigger: GATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCTCCACCGACTGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp GGCCTCCTGCAACTGGTCTGCGAGGTCTTGGTTCACTaGGGTCCACCTCGAATGAGCATCCTGGCATTTCTC +
Preference number: 6 (lower is better)
Translates to: GLLQLVCEVLVH*GPPRMSILAFL
Trigger: GAGAAATGCCAGGATGCTCATTCGAGGTGGACCCAAGTGAACCAAGACCTCGCAGACCAGTTGCAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp AATCTCTTCTCTTGCAGAGTTAGCCAGACCAGAGCATCCCTTACCTaGGCCTGTGTGGAATCCCCGGGGCCAGGCGCATCCTTCGAATAC +
Preference number: 6 (lower is better)
Translates to: NLFSCRVSQTRASLT*ACVESPGPGASFEY
Trigger: GTATTCGAAGGATGCGCCTGGCCCCGGGGATTCCACACAGGCCAAGGTAAGGGATGCTCTGGTCTGGCTAACTCTGCAAGAGAAGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 90 bp GGAGATACAAAGAAATTTCATGACGGAGCGGCTCCCACTTGGCACTaGCGACTCGACTCTGTTCTTCCAGCTGCAGCTTCGCACCACCGG +
Preference number: 6 (lower is better)
Translates to: GDTKKFHDGAAPTWH*RLDSVLPAAASHHR
Trigger: CCGGTGGTGCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTTTGTATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TTCTGCACCTGGCAGGCCAAGGCCTGCAACGATAAGACCGCAGGCTaGCTGTGCTCCATGGAATATGTGAGTTGGGTTGTCCTCATGGTG +
Preference number: 6 (lower is better)
Translates to: FCTWQAKACNDKTAG*LCSMEYVSWVVLMV
Trigger: CACCATGAGGACAACCCAACTCACATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATCGTTGCAGGCCTTGGCCTGCCAGGTGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp TTCAGGGCCCGTGGCAGGATATCTGCCAGGTTGTCTCCAGACAGATaGGTGTTGGCAAGCTGTTGGAACTTTGCTTCCTGCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FRARGRISARLSPDR*VLASCWNFASCCCS
Trigger: GCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACGGGCCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp CCCTCAAGACACCCACATGGTGTTCTAGCTGGCACTTaGTGCTTTCCGGAGACAAGCAAGCCTCGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: PSRHPHGVLAGT*CFPETSKPRAP
Trigger: AGGAGCACGAGGCTTGCTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGTGGGTGTCTTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CCCTCCAGGCAGCTCTGCTCTGCACACTCTCCAGGCTaGCTGTCAGAGCATCAATACATTCTGGTAGCAACG +
Preference number: 6 (lower is better)
Translates to: PSRQLCSAHSPG*LSEHQYILVAT
Trigger: CGTTGCTACCAGAATGTATTGATGCTCTGACAGTCAGCCTGGAGAGTGTGCAGAGCAGAGCTGCCTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GCAAGGTCTGCAGGCTCTTGGAGAGGAAGGGGCTGCTaGGTTCTAAGTATCTGGCTCTCAGGATTCCCCACA +
Preference number: 6 (lower is better)
Translates to: ARSAGSWRGRGC*VLSIWLSGFPT
Trigger: TGTGGGGAATCCTGAGAGCCAGATACTTAGAACTCAGCAGCCCCTTCCTCTCCAAGAGCCTGCAGACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTTGCAGTCGGTGGAGCTCCTGGTCGATTCTCTTGTTaGGGGACAGCCATTGCTCTTCCAGCCTCGCGATCT +
Preference number: 6 (lower is better)
Translates to: FAVGGAPGRFSC*GTAIALPASRS
Trigger: AGATCGCGAGGCTGGAAGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCTCCACCGACTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp GCTTCCAAGGCCAGTGCGTACGTTGTTCGCCACCTCTaGAGATGGATCTCTTTGCTCTTCAGCTCGTGGACC +
Preference number: 6 (lower is better)
Translates to: ASKASAYVVRHL*RWISLLFSSWT
Trigger: GGTCCACGAGCTGAAGAGCAAAGAGATCCATCTTCAGAGGTGGCGAACAACGTACGCACTGGCCTTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp AGTCTTGACTCAGCTGGTGAAAGTCCTGGCACTGCATaGGTGACTGCCGTAAGTCTCCTCGCCAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: SLDSAGESPGTA*VTAVSLLASCP
Trigger: TGGACAGCTGGCGAGGAGACTTACGGCAGTCACTCATGCAGTGCCAGGACTTTCACCAGCTGAGTCAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp CTGCAGAAGAGCCTTCTTGGCAGACCACTGCCATCTTaGCTGAGCTTGAGCCTTGGAGCACTTCTTAGTGGG +
Preference number: 6 (lower is better)
Translates to: LQKSLLGRPLPS*LSLSLGALLSG
Trigger: CCCACTAAGAAGTGCTCCAAGGCTCAAGCTCAGGCAAGATGGCAGTGGTCTGCCAAGAAGGCTCTTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp AGAAATTTCATGACGGAGCGGCTCCCACTTGGCACTTaGGACTCGACTCTGTTCTTCCAGCTGCAGCTTCGC +
Preference number: 6 (lower is better)
Translates to: RNFMTERLPLGT*DSTLFFQLQLR
Trigger: GCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGTGCCCACTCGGTGCGAAGCTTGCTCAGTGAGCCTTaGTGGTTTTCCACGGACCCCAGGAACTTCTTGATT +
Preference number: 6 (lower is better)
Translates to: CAHSVRSLLSEP*WFSTDPRNFLI
Trigger: AATCAAGAAGTTCCTGGGGTCCGTGGAAAACCAGCAAGGCTCACTGAGCAAGCTTCGCACCGAGTGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GTAGGCATTTGTAAGTTCTTGAAGATGGGCCGAGAGTaGGCTCTCCGTGTCTTGCAGCTGCTGCTGGGATGC +
Preference number: 6 (lower is better)
Translates to: VGICKFLKMGRE*ALRVLQLLLGC
Trigger: GCATCCCAGCAGCAGCTGCAAGACACGGAGAGCGCACTCTCGGCCCATCTTCAAGAACTTACAAATGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GCTCTTGACGGAGCGGGAGAAGTCCACCATGCAGGATaGACTCAGCCTCTTTCTGAAGCACTGCTGCTTTGT +
Preference number: 6 (lower is better)
Translates to: ALDGAGEVHHAG*TQPLSEALLLC
Trigger: ACAAAGCAGCAGTGCTTCAGAAAGAGGCTGAGTGCATCCTGCATGGTGGACTTCTCCCGCTCCGTCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp ACACTCTCCTGGTGCTGGCACAGAGAGTCCAACAACTaGCAGAGTTCCTCGGTGGGAGCTGCGTTTGTTTTG +
Preference number: 6 (lower is better)
Translates to: TLSWCWHRESNN*QSSSVGAAFVL
Trigger: CAAAACAAACGCAGCTCCCACCGAGGAACTCTGGCAGTTGTTGGACTCTCTGTGCCAGCACCAGGAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CCTTCCTCGGTGCTTCCCGAGTCTGGGGCAATGATATaGACCATGGAGCTGTCACAGGTGCTAATTCTCCCA +
Preference number: 6 (lower is better)
Translates to: PSSVLPESGAMI*TMELSQVLILP
Trigger: TGGGAGAATTAGCACCTGTGACAGCTCCATGGTGCATATCATTGCCCCAGACTCGGGAAGCACCGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CGAGGTGCTCAGCAAACTCCGTCCTTTCATAGCGCTTaGTTTCTACGTCACAGGTGCTTAGCTGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: RGAQQTPSFHSA*FLRHRCLAGAA
Trigger: CGCTGCTCCAGCTAAGCACCTGTGACGTAGAAAGCAAGCGCTATGAAAGGACGGAGTTTGCTGAGCACCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp TGTTGTATCTTTCTATTCAGGGTTCCGTGCACTCGCTaGCACTGGCGGTTCATCTCCCCGAGGTGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: CCIFLFRVPCTR*HWRFISPRCSA
Trigger: TGCTGAGCACCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAACCCTGAATAGAAAGATACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp CCCCTTTATGTCCTTCAGGGCCCGTGGCAGGATATCTaGCAGGTTGTCTCCAGACAGATTGGTGTTGGCAAG +
Preference number: 6 (lower is better)
Translates to: PLYVLQGPWQDI*QVVSRQIGVGK
Trigger: CTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACGGGCCCTGAAGGACATAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp GTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTaGTTTGCAAAGGCTGCTGGGAGCTGTTCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: VSSSSSSSSTPN*FAKAAGSCSPE
Trigger: CTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGCAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143031.8
CDS CCA 72 bp CTCTTTCATCAGGAGAATGTCTTCACTCAGCACTTCTaGTGCTTTCGGGGCAGGACGGTCTGCAGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: LFHQENVFTQHF*CFRGRTVCREL
Trigger: GAGCTCCCTGCAGACCGTCCTGCCCCGAAAGCACCAGAAGTGCTGAGTGAAGACATTCTCCTGATGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TCAGCATCCTCTAGGGCACTCCTGCATTCTTCCACCTaGGATCCGATCTCCGCAGGGACTATGCTGTACATC +
Preference number: 6 (lower is better)
Translates to: SASSRALLHSST*DPISAGTMLYI
Trigger: GATGTACAGCATAGTCCCTGCGGAGATCGGATCCCAGGTGGAAGAATGCAGGAGTGCCCTAGAGGATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TCCATCTCTCCCTGTAACGACGGCAGGTCGGCCACTTaGTTCTGTGACACATGTTCAGGGGAGATCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SISPCNDGRSAT*FCDTCSGEISA
Trigger: AGCTGAGATCTCCCCTGAACATGTGTCACAGAACCAAGTGGCCGACCTGCCGTCGTTACAGGGAGAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TTCCACCACCTGTTGCATGTCCGCGTCTACAGTTTCTaGCTCAAAGGCCACGTTGGCTTGTTGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: FHHLLHVRVYSF*LKGHVGLLQPQ
Trigger: CTGTGGCTGCAACAAGCCAACGTGGCCTTTGAGCCAGAAACTGTAGACGCGGACATGCAACAGGTGGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGGTTGTCTCCAGACAGATTGGTGTTGGCAAGCTGTTaGAACTTTGCTTCCTGCTGCTGCAGCCAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: RLSPDRLVLASC*NFASCCCSQAA
Trigger: GGCAGCCTGGCTGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp GTCACTCTGCAGCCCCTTTATGTCCTTCAGGGCCCGTaGCAGGATATCTGCCAGGTTGTCTCCAGACAGATT +
Preference number: 6 (lower is better)
Translates to: VTLQPLYVLQGP*QDICQVVSRQI
Trigger: AATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACGGGCCCTGAAGGACATAAAGGGGCTGCAGAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp CCTCACGGCTCTAAGACCACACATTTCTGCCTCGACTaGCTCGCCAAATGCTTCCCAGGTCTCCTTCTCGTG +
Preference number: 6 (lower is better)
Translates to: PHGSKTTHFCLD*LAKCFPGLLLV
Trigger: CACGAGAAGGAGACCTGGGAAGCATTTGGCGAGCAAGTCGAGGCAGAAATGTGTGGTCTTAGAGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TTGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTCTaGCGCCTGTCCTGGGTCCTGCTCGACGAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: LLERSHQVVHPF*RLSWVLLDEVL
Trigger: CAGGACTTCGTCGAGCAGGACCCAGGACAGGCGCAAGAATGGATGGACAACTTGATGGCTCCTTTCCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TCTGCAGAAGATGTTTCACCTGAGACGCAGAACTCTTaGAGAGCTCGGTATCCTTGCCCGCCGCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: SAEDVSPETQNS*RARYPCPPPEA
Trigger: AGCCTCAGGCGGCGGGCAAGGATACCGAGCTCTCAAAGAGTTCTGCGTCTCAGGTGAAACATCTTCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp TGGCAGGCCAAGGCCTGCAACGATAAGACCGCAGGCTaGCTGTGCTCCATGGAATATGTGAGTTGGGTTGTC +
Preference number: 6 (lower is better)
Translates to: WQAKACNDKTAG*LCSMEYVSWVV
Trigger: GACAACCCAACTCACATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATCGTTGCAGGCCTTGGCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp ATGTCCTTCAGGGCCCGTGGCAGGATATCTGCCAGGTaGTCTCCAGACAGATTGGTGTTGGCAAGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: MSFRARGRISAR*SPDRLVLASCW
Trigger: CCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACGGGCCCTGAAGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp GAGGGCCTCGTGAAGCTCAGGAAGGGGATCTTCGCTTaGTGCCTTCAGAGCCTGCAGCCTCTTTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: EGLVKLRKGIFA*CLQSLQPLFQL
Trigger: AAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACAAAGCGAAGATCCCCTTCCTGAGCTTCACGAGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp TGGCATTTCTCTTCGATTATGCCAGCCATGGAGGGGCAGGAAGCTTaGAGTCTGCCAATGACCTCCTGCAGTTTCTCCCAGCTCCGTTCC +
Preference number: 6 (lower is better)
Translates to: WHFSSIMPAMEGQEA*SLPMTSCSFSQLRS
Trigger: GGAACGGAGCTGGGAGAAACTGCAGGAGGTCATTGGCAGACTCAAAGCTTCCTGCCCCTCCATGGCTGGCATAATCGAAGAGAAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp CGGCGGGCAGAACCAAGGCTTGCTCTTCTGTTTGGTTaGGATGCTGCGACTGTTCCAGAAGTTCAATGGCTG +
Preference number: 6 (lower is better)
Translates to: RRAEPRLALLFG*DAATVPEVQWL
Trigger: CAGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TCGCTGTGTTCTGTGGCTTGCTGGAAACACTTCCTGTaGGCCAGCTGCTCCACAAGTTCCCACCCATGTTCA +
Preference number: 6 (lower is better)
Translates to: SLCSVACWKHFL*ASCSTSSHPCS
Trigger: TGAACATGGGTGGGAACTTGTGGAGCAGCTGGCTCACAGGAAGTGTTTCCAGCAAGCCACAGAACACAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CCATCTGGACCTTTTCCAAGTTGCACTTCACAGTCTTaGGTTTCCAGGAAAGGGCCTCGGCCTCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PSGPFPSCTSQS*VSRKGPRPPAE
Trigger: CTCAGCAGGAGGCCGAGGCCCTTTCCTGGAAACTCAAGACTGTGAAGTGCAACTTGGAAAAGGTCCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CCTGCTCACTGGCAAAGTCAGACGTCACCCTGGATTTaGTGTCTTGCAGGTGTTGCTCAAGAAGCCCCCTTT +
Preference number: 6 (lower is better)
Translates to: PAHWQSQTSPWI*CLAGVAQEAPF
Trigger: AAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CAGGCCTCTTCCTCCAGGGCTCTCACTTCCGCAACTTaGTCTGCTCCAAATCCCTCTCCCTTTTGTAACGAA +
Preference number: 6 (lower is better)
Translates to: QASSSRALTSAT*SAPNPSPFCNE
Trigger: TTCGTTACAAAAGGGAGAGGGATTTGGAGCAGAGCAAGTTGCGGAAGTGAGAGCCCTGGAGGAAGAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp CTCCACGGCGTTCATCCAGCTGATCATCTCGGAGATTaGTTCTCGGGACGGCAATTTCTCCATCTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LHGVHPADHLGD*FSGRQFLHLKL
Trigger: CAGCTTCAGATGGAGAAATTGCCGTCCCGAGAAGCAATCTCCGAGATGATCAGCTGGATGAACGCCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp GCCAAGGCCTGCAACGATAAGACCGCAGGCTTGCTGTaGTCCATGGAATATGTGAGTTGGGTTGTCCTCATG +
Preference number: 6 (lower is better)
Translates to: AKACNDKTAGLL*SMEYVSWVVLM
Trigger: CATGAGGACAACCCAACTCACATATTCCATGGAGCACAGCAAGCCTGCGGTCTTATCGTTGCAGGCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp GGCCTCGTGAAGCTCAGGAAGGGGATCTTCGCTTTGTaGCTTCAGAGCCTGCAGCCTCTTTTTCAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: GLVKLRKGIFAL*LQSLQPLFQLL
Trigger: AAGAAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACAAAGCGAAGATCCCCTTCCTGAGCTTCACGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp TCCTCTCCTGCTCACTGGCAAAGTCAGACGTCACCCTaGATTTGCTGTCTTGCAGGTGTTGCTCAAGAAGCC +
Preference number: 6 (lower is better)
Translates to: SSPAHWQSQTSP*ICCLAGVAQEA
Trigger: GGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CCAGGGCATCCTCCCTCATCTCTACCTTCTGGTTCATaGTCTCCAGCTGGAGTCTGCACTTCAGCACAATGT +
Preference number: 6 (lower is better)
Translates to: PGHPPSSLPSGS*SPAGVCTSAQC
Trigger: ACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGAGGATGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TTCTTTTTACATTGGTCCCAGGTCTCTGCAGTGCTCTaGAGCCGGCTGATCACCTCTCCCAGGCTAAGCTCA +
Preference number: 6 (lower is better)
Translates to: FFLHWSQVSAVL*SRLITSPRLSS
Trigger: TGAGCTTAGCCTGGGAGAGGTGATCAGCCGGCTCCAGAGCACTGCAGAGACCTGGGACCAATGTAAAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp TCTCCTGGTTATCGCAGACGTCGTAGACAACAGGCTTaGAGAGCTCAGACTCAATGCGAGCCAACCAGGTAC +
Preference number: 6 (lower is better)
Translates to: SPGYRRRRRQQA*RAQTQCEPTRY
Trigger: GTACCTGGTTGGCTCGCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACGACGTCTGCGATAACCAGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000126903.2
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CCA 72 bp ATCTCTTGCAGTCTCTTCACCCTGAGCGCTATTTCCTaGATGTCAGAGGGAGGCTCGGCCAACTTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ISCSLFTLSAIS*MSEGGSANFRA
Trigger: AGCTCTGAAGTTGGCCGAGCCTCCCTCTGACATCCAGGAAATAGCGCTCAGGGTGAAGAGACTGCAAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp AAGAAATTTCATGACGGAGCGGCTCCCACTTGGCACTaGCGACTCGACTCTGTTCTTCCAGCTGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: KKFHDGAAPTWH*RLDSVLPAAAS
Trigger: CGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TCCTGCTCACTGGCAAAGTCAGACGTCACCCTGGATTaGCTGTCTTGCAGGTGTTGCTCAAGAAGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: SCSLAKSDVTLD*LSCRCCSRSPL
Trigger: AAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTCCTGAGCCAGCTGTCAAGCTCCTTCACGTGTGCTTaGGGTAAGAGCATCTTCACATGCTGTAGGACGGTC +
Preference number: 6 (lower is better)
Translates to: LLSQLSSSFTCA*GKSIFTCCRTV
Trigger: GACCGTCCTACAGCATGTGAAGATGCTCTTACCCAAAGCACACGTGAAGGAGCTTGACAGCTGGCTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GGTCTCTTGAGCCAGCGGGGCCTCACAGTGTTCCGCTaGTCTCATTACCATCTGGATCTTAGCATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GLLSQRGLTVFR*SHYHLDLSISF
Trigger: GAAGGAGATGCTAAGATCCAGATGGTAATGAGACAAGCGGAACACTGTGAGGCCCCGCTGGCTCAAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GCGGCGGGCAGAACCAAGGCTTGCTCTTCTGTTTGGTaGAGATGCTGCGACTGTTCCAGAAGTTCAATGGCT +
Preference number: 6 (lower is better)
Translates to: AAGRTKACSSVW*RCCDCSRSSMA
Trigger: AGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGACTGCCTCGAATAGCAGCCAGCTTGTCTCTAAGATaGCCGAGCTGCTCTTTGGCATCCTGCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: RLPRIAASLSLR*PSCSLASCSSS
Trigger: AGAGCTGGAGCAGGATGCCAAAGAGCAGCTCGGCAATCTTAGAGACAAGCTGGCTGCTATTCGAGGCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TCTTCGATTATGCCAGCCATGGAGGGGCAGGAAGCTTaGAGTCTGCCAATGACCTCCTGCAGTTTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SSIMPAMEGQEA*SLPMTSCSFSQ
Trigger: CTGGGAGAAACTGCAGGAGGTCATTGGCAGACTCAAAGCTTCCTGCCCCTCCATGGCTGGCATAATCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp TGTCCCGAGAGGACTTCCAACAGGTCCAGGAGGACATGCCCCTTCTaGATGTCTGCGAATAAGTCAGATACAACTGAGGGAGGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: CPERTSNRSRRTCPF*MSANKSDTTEGGVC
Trigger: GCACACACCTCCCTCAGTTGTATCTGACTTATTCGCAGACATCAAGAAGGGGCATGTCCTCCTGGACCTGTTGGAAGTCCTCTCGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000148324.2
ENSMUST00000150317.8
CDS CAA 90 bp CTCCTGCTCACTGGCAAAGTCAGACGTCACCCTGGATTTGCTGTCTaGCAGGTGTTGCTCAAGAAGCCCCCTTTGTGTGTCATACCTCTC +
Preference number: 6 (lower is better)
Translates to: LLLTGKVRRHPGFAV*QVLLKKPPLCVIPL
Trigger: GAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GAAGGTCTGGCGGCGGGCAGAACCAAGGCTTGCTCTTCTGTTTGGTaGAGATGCTGCGACTGTTCCAGAAGTTCAATGGCTGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: EGLAAGRTKACSSVW*RCCDCSRSSMAALL
Trigger: AAGAAGAGCAGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCCCGCCGCCAGACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GGGCCACCTGAGGCTCCACAAGCTGAGGTACGGAGGGATTTGGTCTaGATGTTAGTTCATGGTGAAGATACTGCCACTTGTCACCGCTCT +
Preference number: 6 (lower is better)
Translates to: GPPEAPQAEVRRDLV*MLVHGEDTATCHRS
Trigger: AGAGCGGTGACAAGTGGCAGTATCTTCACCATGAACTAACATCAAGACCAAATCCCTCCGTACCTCAGCTTGTGGAGCCTCAGGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000148825.2
CDS CAA 90 bp TGTCTGTCTCCTCCTCCTCCTCTTCCTCTTCCACTCCAAACTGCTTaGCAAAGGCTGCTGGGAGCTGTTCTCCTGAGTCCACCTCATCAA +
Preference number: 6 (lower is better)
Translates to: CLSPPPPLPLPLQTA*QRLLGAVLLSPPHQ
Trigger: TTGATGAGGTGGACTCAGGAGAACAGCTCCCAGCAGCCTTTGCAAAGCAGTTTGGAGTGGAAGAGGAAGAGGAGGAGGAGGAGACAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143031.8
CDS TCA 72 bp AGAGCCTTTAGCAATAAGATGCTGCAAGGTGTCTGCTaGGGAGCCATCGGCATGGTCTCCATGTTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RAFSNKMLQGVC*GAIGMVSMLEE
Trigger: CTCCTCCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACACCTTGCAGCATCTTATTGCTAAAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GGAGAGTTCAGACTTAGCGTTAGGCGCTGTTGCTGCTaGTGCAGAGAAACCTTAAGGTCCTGGAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GEFRLSVRRCCC*CRETLRSWSFS
Trigger: GGAGAAGCTCCAGGACCTTAAGGTTTCTCTGCATCAGCAGCAACAGCGCCTAACGCTAAGTCTGAACTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTTCCTTTTCCAATACTGACTAGCTCCGCCATGCCTTaGAGCAAGGTCTGCAGGCTCTTGGAGAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: FPFPILTSSAMP*SKVCRLLERKG
Trigger: CCCCTTCCTCTCCAAGAGCCTGCAGACCTTGCTTCAAGGCATGGCGGAGCTAGTCAGTATTGGAAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CCTCTTTCAGGTGGAGAAGTTGGTTCCCAGTACTCATaGCTGCGGACTTCAGGGAGGACCTCTCATCGACTT +
Preference number: 6 (lower is better)
Translates to: PLSGGEVGSQYS*LRTSGRTSHRL
Trigger: AAGTCGATGAGAGGTCCTCCCTGAAGTCCGCAGTCATGAGTACTGGGAACCAACTTCTCCACCTGAAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp TCTGCGAGGTCTTGGTTCACTTGGGTCCACCTCGAATaGGCATCCTGGCATTTCTCTTCGATTATGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SARSWFTWVHLE*ASWHFSSIMPA
Trigger: GGCTGGCATAATCGAAGAGAAATGCCAGGATGCTCATTCGAGGTGGACCCAAGTGAACCAAGACCTCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp GCCAGGATGTGCTGGCTCAAGTCGGCCTTCATAGTCTaGAGTTCTTTCAAGCTGTGCGTCCAGTTAGCCAGA +
Preference number: 6 (lower is better)
Translates to: ARMCWLKSAFIV*SSFKLCVQLAR
Trigger: TCTGGCTAACTGGACGCACAGCTTGAAAGAACTTCAGACTATGAAGGCCGACTTGAGCCAGCACATCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp TGTCCCGTTAAAGTGGCCAGCTGCTCATCTTCCTGCTaGGCCTCCTTTAAGCCTTCTTTGCTGTCATCGGTG +
Preference number: 6 (lower is better)
Translates to: CPVKVASCSSSC*ASFKPSLLSSV
Trigger: CACCGATGACAGCAAAGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGCAGCTGGCCACTTTAACGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp CACTGGAATGTATTAGATCCTTTATCCCGAGGCAACTaGTGTCCCGAGAGGACTTCCAACAGGTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: HWNVLDPLSRGN*CPERTSNRSRR
Trigger: CCTCCTGGACCTGTTGGAAGTCCTCTCGGGACAGCAGTTGCCTCGGGATAAAGGATCTAATACATTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp CCAGCAGGACTTCCACAGACTCCTTGCTCTCATAAGTaGCGTTCCAGACATCCAACTTGGCCTTCGCTTCAT +
Preference number: 6 (lower is better)
Translates to: PAGLPQTPCSHK*RSRHPTWPSLH
Trigger: ATGAAGCGAAGGCCAAGTTGGATGTCTGGAACGGCACTTATGAGAGCAAGGAGTCTGTGGAAGTCCTGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp ATTCTCAGTTGTGATCAAGGCACTCCTCTCCTCCAATaGACCTCCCTGGGAGGACTGCAGGGTTGTGTGAAT +
Preference number: 6 (lower is better)
Translates to: ILSCDQGTPLLQ*TSLGGLQGCVN
Trigger: ATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGAGGAGTGCCTTGATCACAACTGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TCAGACGTCACCCTGGATTTGCTGTCTTGCAGGTGTTaGTCAAGAAGCCCCCTTTGTGTGTCATACCTCTCC +
Preference number: 6 (lower is better)
Translates to: SDVTLDLLSCRC*SRSPLCVSYLS
Trigger: GGAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGTGCTCCCACTGGGCGCATAGCTGTTGGATCCCCCTaGGACATGTGTTTTCACATCTTTCATCTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: CAPTGRIAVGSP*DMCFHIFHLAQ
Trigger: CTGAGCAAGATGAAAGATGTGAAAACACATGTCGCAGGGGGATCCAACAGCTATGCGCCCAGTGGGAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GATTCTTTGATTGTCTCTTCTCCCTCGGTGAGCCCATaGTCCTTCAGAGAGTCACTTAGCTGGGCCACAGTC +
Preference number: 6 (lower is better)
Translates to: DSLIVSSPSVSP*SFRESLSWATV
Trigger: GACTGTGGCCCAGCTAAGTGACTCTCTGAAGGAGCATGGGCTCACCGAGGGAGAAGAGACAATCAAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTCGGTAATCCTCACGGCTCTAAGACCACACATTTCTaGCTCGACTTGCTCGCCAAATGCTTCCCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: FGNPHGSKTTHF*LDLLAKCFPGL
Trigger: GAGACCTGGGAAGCATTTGGCGAGCAAGTCGAGGCAGAAATGTGTGGTCTTAGAGCCGTGAGGATTACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GTCTCGGTGAGGCTCCGTAAATCAGCTACGGAGGATTaGAGTTCCTCTTGTTTAAGGTGTGCCAGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: VSVRLRKSATED*SSSCLRCASSS
Trigger: ACTGGAGCTGGCACACCTTAAACAAGAGGAACTGCAATCCTCCGTAGCTGATTTACGGAGCCTCACCGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGCTTTTACTTCAGACTCGATCGCAACCACATCATCTaGCACCTGCTGGACGTGTGGGAGGGCCTCCATTAT +
Preference number: 6 (lower is better)
Translates to: CFYFRLDRNHII*HLLDVWEGLHY
Trigger: ATAATGGAGGCCCTCCCACACGTCCAGCAGGTGGCAGATGATGTGGTTGCGATCGAGTCTGAAGTAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AACTGGGCCTGCAAAGCAGCTTTGCTCTTGGCGTGTTaGAAAGGGTCAGCGGCCAGCTTTCCTTTTCCAATA +
Preference number: 6 (lower is better)
Translates to: NWACKAALLLAC*KGSAASFPFPI
Trigger: TATTGGAAAAGGAAAGCTGGCCGCTGACCCTTTGCAACACGCCAAGAGCAAAGCTGCTTTGCAGGCCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGTTCCAAATGTTGTATCTTTCTATTCAGGGTTCCGTaGACTCGCTGCCACTGGCGGTTCATCTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: CSKCCIFLFRVP*TRCHWRFISPR
Trigger: CCTCGGGGAGATGAACCGCCAGTGGCAGCGAGTGCACGGAACCCTGAATAGAAAGATACAACATTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp ATAGCCACTCTTAGGCAGAGGTCCTCCCATTGTCTGTaGAAAAGCTGGATCTGCTCCTTCAGAACCGTCACG +
Preference number: 6 (lower is better)
Translates to: IATLRQRSSHCL*KSWICSFRTVT
Trigger: CGTGACGGTTCTGAAGGAGCAGATCCAGCTTTTGCACAGACAATGGGAGGACCTCTGCCTAAGAGTGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp GCCTTGCTGCTGGCCTTGATCAGCTGGTCGCCCATCTaGTTCAGCTGCAGTTTGTTTTCTGTGAATAAGCTG +
Preference number: 6 (lower is better)
Translates to: ALLLALISWSPI*FSCSLFSVNKL
Trigger: CAGCTTATTCACAGAAAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAGCAGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp TTCTTCACCCTTGATCCGATGACGTCAAAGAGATGCTaGCAGCGGTCGTTGATCTTGCTGAGCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: FFTLDPMTSKRC*QRSLILLSFSS
Trigger: GGAGGAGAAGCTCAGCAAGATCAACGACCGCTGGCAGCATCTCTTTGACGTCATCGGATCAAGGGTGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp AGCTTCTTCACCCTTGATCCGATGACGTCAAAGAGATaGTGCCAGCGGTCGTTGATCTTGCTGAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SFFTLDPMTSKR*CQRSLILLSFS
Trigger: GGAGAAGCTCAGCAAGATCAACGACCGCTGGCAGCATCTCTTTGACGTCATCGGATCAAGGGTGAAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp GTGTCTGCTGAGGAGCCATCGGCATGGTCTCCATGTTaGAGGAGATCCAAGATGGATTTGGTTTGTGACTCC +
Preference number: 6 (lower is better)
Translates to: VSAEEPSAWSPC*RRSKMDLVCDS
Trigger: GGAGTCACAAACCAAATCCATCTTGGATCTCCTCCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TCCCTCATCTCTACCTTCTGGTTCATGGTCTCCAGCTaGAGTCTGCACTTCAGCACAATGTCCTGGATCGCA +
Preference number: 6 (lower is better)
Translates to: SLISTFWFMVSS*SLHFSTMSWIA
Trigger: TGCGATCCAGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TCTGTTCCAGGCGCGCTAAGGCTTCTTTGTAAGACCTaGGCAACGGGAATATGGACTGTCCGAGATCCATCT +
Preference number: 6 (lower is better)
Translates to: SVPGALRLLCKT*ATGIWTVRDPS
Trigger: AGATGGATCTCGGACAGTCCATATTCCCGTTGCCCAGGTCTTACAAAGAAGCCTTAGCGCGCCTGGAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TTCAGCTCAAGAGCCAGTTTCTGGAAGAACACCTGCTaGGCACATGCATCCTCTCTGAGTAACCCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: FSSRASFWKNTC*AHASSLSNPGL
Trigger: GAGACCTGGGTTACTCAGAGAGGATGCATGTGCCCAGCAGGTGTTCTTCCAGAAACTGGCTCTTGAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGGTGCTTAAGAAGGGTTTGCAGTCGGTGGAGCTCCTaGTCGATTCTCTTGTTGAGGGACAGCCATTGCTCT +
Preference number: 6 (lower is better)
Translates to: RCLRRVCSRWSS*SILLLRDSHCS
Trigger: AGAGCAATGGCTGTCCCTCAACAAGAGAATCGACCAGGAGCTCCACCGACTGCAAACCCTTCTTAAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 72 bp AGGCTCTCTTCATTCAAACGTTCAATGTCAGGTGACTaGGCTGTCAGGGCCAGCACGTGGTTCAGGAACAAG +
Preference number: 6 (lower is better)
Translates to: RLSSFKRSMSGD*AVRASTWFRNK
Trigger: CTTGTTCCTGAACCACGTGCTGGCCCTGACAGCCCAGTCACCTGACATTGAACGTTTGAATGAAGAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp CAGTCCTGTCACCTTCCATGTGTTTGTAGTGATGCTTaGAATGGGAAGGGCTGTCAGGAACATGCCACGGGT +
Preference number: 6 (lower is better)
Translates to: QSCHLPCVCSDA*NGKGCQEHATG
Trigger: ACCCGTGGCATGTTCCTGACAGCCCTTCCCATTCCAAGCATCACTACAAACACATGGAAGGTGACAGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp TCTCCTCCAATGCACCTCCCTGGGAGGACTGCAGGGTaGTGTGAATCTCAGAAGCACATTTCAGAAGTCTCG +
Preference number: 6 (lower is better)
Translates to: SPPMHLPGRTAG*CESQKHISEVS
Trigger: CGAGACTTCTGAAATGTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GTCAGACGTCACCCTGGATTTGCTGTCTTGCAGGTGTaGCTCAAGAAGCCCCCTTTGTGTGTCATACCTCTC +
Preference number: 6 (lower is better)
Translates to: VRRHPGFAVLQV*LKKPPLCVIPL
Trigger: GAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGCTCAGCTTGCCACTTTAAGCCAGAAAACTCACACTaGATTGCCTGGAGCTCAGCGGCTGGAGTGACCATG +
Preference number: 6 (lower is better)
Translates to: SSACHFKPENSH*IAWSSAAGVTM
Trigger: CATGGTCACTCCAGCCGCTGAGCTCCAGGCAATCAAGTGTGAGTTTTCTGGCTTAAAGTGGCAAGCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTTTCGAGTTGTGTGAAGAAGCCTGTCGCACCGTTCTaGCATAGACCCAATCTCCTGAAGTGCCGGGATGGT +
Preference number: 6 (lower is better)
Translates to: LSSCVKKPVAPF*HRPNLLKCRDG
Trigger: ACCATCCCGGCACTTCAGGAGATTGGGTCTATGCAAGAACGGTGCGACAGGCTTCTTCACACAACTCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CGTGGCAGGATATCTGCCAGGTTGTCTCCAGACAGATaGGTGTTGGCAAGCTGTTGGAACTTTGCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RGRISARLSPDR*VLASCWNFASC
Trigger: GCAGGAAGCAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCTGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp GTCCGTAAAGGTCTCTTGAGCCAGCGGGGCCTCACAGTGTTCCGCTaGTCTCATTACCATCTGGATCTTAGCATCTCCTTCTGGCTTCAA +
Preference number: 6 (lower is better)
Translates to: VRKGLLSQRGLTVFR*SHYHLDLSISFWLQ
Trigger: TTGAAGCCAGAAGGAGATGCTAAGATCCAGATGGTAATGAGACAAGCGGAACACTGTGAGGCCCCGCTGGCTCAAGAGACCTTTACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CTCTGCCGAACACCCCGGGCGGCCCTCTGCCATTGGTCTGACAGCTaGGAGAATTCAGAGACAAATTCTGGTCTCTTTTCTATTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LCRTPRAALCHWSDS*ENSETNSGLFSISA
Trigger: AGCAGAAATAGAAAAGAGACCAGAATTTGTCTCTGAATTCTCCAAGCTGTCAGACCAATGGCAGAGGGCCGCCCGGGGTGTTCGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp AGGCACTCCTCTCCTCCAATGCACCTCCCTGGGAGGACTGCAGGGTaGTGTGAATCTCAGAAGCACATTTCAGAAGTCTCGCTATCTTTT +
Preference number: 6 (lower is better)
Translates to: RHSSPPMHLPGRTAG*CESQKHISEVSLSF
Trigger: AAAAGATAGCGAGACTTCTGAAATGTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGAGGAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TTGTTGATGTTGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTCTaGCGCCTGTCCTGGGTCCTGCTCGACGAAGTCCTGAACTTCAGA +
Preference number: 6 (lower is better)
Translates to: LLMLLERSHQVVHPF*RLSWVLLDEVLNFR
Trigger: TCTGAAGTTCAGGACTTCGTCGAGCAGGACCCAGGACAGGCGCAAGAATGGATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GAGCTGCGAGGTTCTGGATTCTGCTCTCTGGGATACTTGTTGATGTaGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTCTTGCGCCTG +
Preference number: 6 (lower is better)
Translates to: ELRGSGFCSLGYLLM*LERSHQVVHPFLRL
Trigger: CAGGCGCAAGAATGGATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCAGAATCCAGAACCTCGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GGACTTCCAACAGGTCCAGGAGGACATGCCCCTTCTTaGTGTCTGCGAATAAGTCAGATACAACTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: GLPTGPGGHAPS*CLRISQIQLRE
Trigger: CTCCCTCAGTTGTATCTGACTTATTCGCAGACATCAAGAAGGGGCATGTCCTCCTGGACCTGTTGGAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000148324.2
ENSMUST00000150317.8
CDS TCA 72 bp CAGAGTTACTCGGCTCCTCCAAACTGGTACAGACTCTaGTCTGCTTTGCGATGGAATCTCGGATATCCCGCA +
Preference number: 6 (lower is better)
Translates to: QSYSAPPNWYRL*SALRWNLGYPA
Trigger: TGCGGGATATCCGAGATTCCATCGCAAAGCAGATCAGAGTCTGTACCAGTTTGGAGGAGCCGAGTAACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp AGGCTTCTGCAATCATCTTCCAATCTCAGTAGCTGCTaGAAGGAGTTATTCAGTTCCCCTGCTCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RLLQSSSNLSSC*KELFSSPARAW
Trigger: CCAGGCCCGAGCAGGGGAACTGAATAACTCCTTTCAGCAGCTACTGAGATTGGAAGATGATTGCAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp AGAGTGGAGGGATGCTGGTCCTCACTGAACTTCTCCTaGAGCACCATCTGGACCTTTTCCAAGTTGCACTTC +
Preference number: 6 (lower is better)
Translates to: RVEGCWSSLNFS*STIWTFSKLHF
Trigger: GAAGTGCAACTTGGAAAAGGTCCAGATGGTGCTTCAGGAGAAGTTCAGTGAGGACCAGCATCCCTCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGCATTCCCAGGACTAGGGACCTTGCTGCTGGAAGCTaGTTGCCGATTTGCATCTTCATTCTCTTGGTGACC +
Preference number: 6 (lower is better)
Translates to: CIPRTRDLAAGS*LPICIFILLVT
Trigger: GGTCACCAAGAGAATGAAGATGCAAATCGGCAATCAGCTTCCAGCAGCAAGGTCCCTAGTCCTGGGAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTATCATCAAATTCTTCCCATTTCTGTAGCATGCTCTaGAGCTGCGCACCACGCAGGCAGGCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LSSNSSHFCSML*SCAPRRQASSS
Trigger: GGAGGAAGAGGCCTGCCTGCGTGGTGCGCAGCTTCAGAGCATGCTACAGAAATGGGAAGAATTTGATGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp CCTTCCACTCCTGTAGTACTGATTGCACAGAAGCTCTaGGCTGGTGGACCTGGCTGGTCACGTTATTCTTCT +
Preference number: 6 (lower is better)
Translates to: PSTPVVLIAQKL*AGGPGWSRYSS
Trigger: AGAAGAATAACGTGACCAGCCAGGTCCACCAGCTCAGAGCTTCTGTGCAATCAGTACTACAGGAGTGGAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp TCTCCCAGGCTAAGCTCAGTGTCCTTCCAGCTTTCCTaGAGCCTGCTGATTTGTCCGTCTACGAATTCTCTC +
Preference number: 6 (lower is better)
Translates to: SPRLSSVSFQLS*SLLICPSTNSL
Trigger: GAGAGAATTCGTAGACGGACAAATCAGCAGGCTTCAGGAAAGCTGGAAGGACACTGAGCTTAGCCTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp TGCTGCATTCCCAGGACTAGGGACCTTGCTGGAAGCTaGTTGCCGATTTGCATCTTCATTCTCTTGGTGACC +
Preference number: 6 (lower is better)
Translates to: CCIPRTRDLAGS*LPICIFILLVT
Trigger: GGTCACCAAGAGAATGAAGATGCAAATCGGCAATCAGCTTCCAGCAAGGTCCCTAGTCCTGGGAATGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148825.2
CDS GCA 72 bp CCTGCTCAGCTTGCAGTGAAAAGTGTAGATCATCAATaGCCAAGAAACCCTCTCCATCTTCCGTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PAQLAVKSVDHQ*PRNPLHLPWAA
Trigger: TGCTGCCCACGGAAGATGGAGAGGGTTTCTTGGGCATTGATGATCTACACTTTTCACTGCAAGCTGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000148324.2
ENSMUST00000150317.8
CDS GCA 72 bp TATGCCAGTCTTCCAGCAGGACTTCCACAGACTCCTTaGTCTCATAAGTGCCGTTCCAGACATCCAACTTGG +
Preference number: 6 (lower is better)
Translates to: YASLPAGLPQTP*SHKCRSRHPTW
Trigger: CCAAGTTGGATGTCTGGAACGGCACTTATGAGAGCAAGGAGTCTGTGGAAGTCCTGCTGGAAGACTGGCATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp CGGCTCCTCCAAACTGGTACAGACTCTGATCTGCTTTaGGATGGAATCTCGGATATCCCGCAGGTTCTGATA +
Preference number: 6 (lower is better)
Translates to: RLLQTGTDSDLL*DGISDIPQVLI
Trigger: TATCAGAACCTGCGGGATATCCGAGATTCCATCGCAAAGCAGATCAGAGTCTGTACCAGTTTGGAGGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTACTCGGCTCCTCCAAACTGGTACAGACTCTGATCTaGTTTGCGATGGAATCTCGGATATCCCGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LLGSSKLVQTLI*FAMESRISRRF
Trigger: GAACCTGCGGGATATCCGAGATTCCATCGCAAAGCAGATCAGAGTCTGTACCAGTTTGGAGGAGCCGAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CCTTCCTCTGTCCTCCTCAGTCAGCTCATGGGATTCTaGTTTCCCAAGGATCTGTTCAGTCCACTCATCGAT +
Preference number: 6 (lower is better)
Translates to: PSSVLLSQLMGF*FPKDLFSPLID
Trigger: ATCGATGAGTGGACTGAACAGATCCTTGGGAAAGCAGAATCCCATGAGCTGACTGAGGAGGACAGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AAGCCTTCTTTAACGCACCGCCTTGGAAACGGAGTCTaGTCTCCAGCTCCTGTAACTTCTGCATTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: KPSLTHRLGNGV*SPAPVTSAFSP
Trigger: AGGAGAGAATGCAGAAGTTACAGGAGCTGGAGAGCAGACTCCGTTTCCAAGGCGGTGCGTTAAAGAAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTCTTCAGCTCAAGAGCCAGTTTCTGGAAGAACACCTaGTGGGCACATGCATCCTCTCTGAGTAACCCAGGT +
Preference number: 6 (lower is better)
Translates to: FFSSRASFWKNT*WAHASSLSNPG
Trigger: ACCTGGGTTACTCAGAGAGGATGCATGTGCCCAGCAGGTGTTCTTCCAGAAACTGGCTCTTGAGCTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTTCAGGTGGAGAAGTTGGTTCCCAGTACTCATGACTaGGGACTTCAGGGAGGACCTCTCATCGACTTCCTT +
Preference number: 6 (lower is better)
Translates to: FQVEKLVPSTHD*GLQGGPLIDFL
Trigger: AAGGAAGTCGATGAGAGGTCCTCCCTGAAGTCCGCAGTCATGAGTACTGGGAACCAACTTCTCCACCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp AGGGTAGAATTTTCCAGGAAGGCCTCTTTGGTCTTCTaGAGGTCACTCTGCAGCCCCTTTATGTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RVEFSRKASLVF*RSLCSPFMSFR
Trigger: CCTGAAGGACATAAAGGGGCTGCAGAGTGACCTGCAGAAGACCAAAGAGGCCTTCCTGGAAAATTCTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp AACACGATCCACGAATTGAGTCTGTCTTCAATCTCCTaGTTGCGGATAGCCACTCTTAGGCAGAGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: NTIHELSLSSIS*LRIATLRQRSS
Trigger: GGAGGACCTCTGCCTAAGAGTGGCTATCCGCAAGCAGGAGATTGAAGACAGACTCAATTCGTGGATCGTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp CGTCGTAGACAACAGGCTTGGAGAGCTCAGACTCAATaGGAGCCAACCAGGTACGAAGGTTGCTCATGTTTT +
Preference number: 6 (lower is better)
Translates to: RRRQQAWRAQTQ*EPTRYEGCSCF
Trigger: AAAACATGAGCAACCTTCGTACCTGGTTGGCTCGCATTGAGTCTGAGCTCTCCAAGCCTGTTGTCTACGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000126903.2
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CCA 72 bp GGGGCCTCACAGTGTTCCGCTTGTCTCATTACCATCTaGATCTTAGCATCTCCTTCTGGCTTCAAGGCAATG +
Preference number: 6 (lower is better)
Translates to: GASQCSACLITI*ILASPSGFKAM
Trigger: CATTGCCTTGAAGCCAGAAGGAGATGCTAAGATCCAGATGGTAATGAGACAAGCGGAACACTGTGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GGATATCTGCCAGGTTGTCTCCAGACAGATTGGTGTTaGCAAGCTGTTGGAACTTTGCTTCCTGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GYLPGCLQTDWC*QAVGTLLPAAA
Trigger: TGCAGCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp TCTATTTTGGAGTTCTGTGGCTTCGGGGCTCTGGCTTaGCAGATATTCCTTGTGGCTCACATTGACGGAGAC +
Preference number: 6 (lower is better)
Translates to: SILEFCGFGALA*QIFLVAHIDGD
Trigger: GTCTCCGTCAATGTGAGCCACAAGGAATATCTGCCAAGCCAGAGCCCCGAAGCCACAGAACTCCAAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp CCTGGATCGCACACTGATCTAGTGTGTGTAACTCCCTaGGTACAGAGTTACTCGGCTCCTCCAAACTGGTAC +
Preference number: 6 (lower is better)
Translates to: PGSHTDLVCVTP*VQSYSAPPNWY
Trigger: GTACCAGTTTGGAGGAGCCGAGTAACTCTGTACCAAGGGAGTTACACACACTAGATCAGTGTGCGATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AACACTTGTGAGAGACTGCCTCGAATAGCAGCCAGCTaGTCTCTAAGATTGCCGAGCTGCTCTTTGGCATCC +
Preference number: 6 (lower is better)
Translates to: NTCERLPRIAAS*SLRLPSCSLAS
Trigger: GGATGCCAAAGAGCAGCTCGGCAATCTTAGAGACAAGCTGGCTGCTATTCGAGGCAGTCTCTCACAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CCACCTGAGGCTCCACAAGCTGAGGTACGGAGGGATTaGGTCTTGATGTTAGTTCATGGTGAAGATACTGCC +
Preference number: 6 (lower is better)
Translates to: PPEAPQAEVRRD*VLMLVHGEDTA
Trigger: GGCAGTATCTTCACCATGAACTAACATCAAGACCAAATCCCTCCGTACCTCAGCTTGTGGAGCCTCAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000148825.2
CDS CAA 72 bp AGGATATCTGCCAGGTTGTCTCCAGACAGATTGGTGTaGGCAAGCTGTTGGAACTTTGCTTCCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RISARLSPDRLV*ASCWNFASCCC
Trigger: GCAGCAGCAGGAAGCAAAGTTCCAACAGCTTGCCAACACCAATCTGTCTGGAGACAACCTGGCAGATATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 72 bp ACGATCCACGAATTGAGTCTGTCTTCAATCTCCTGCTaGCGGATAGCCACTCTTAGGCAGAGGTCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: TIHELSLSSISC*RIATLRQRSSH
Trigger: ATGGGAGGACCTCTGCCTAAGAGTGGCTATCCGCAAGCAGGAGATTGAAGACAGACTCAATTCGTGGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp AGCTCATGTTCTGCGATCCTGAAGGCCTCTTTCAGATTGTCTTTGTaGGATCTGTGCCTCATGCTGTCCATGTCAATCAGGTCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: SSCSAILKASFRLSL*DLCLMLSMSIRSGR
Trigger: GCGACCAGACCTGATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 90 bp CAGTTTAACAGGAGGCACAGCTGGCAGGCTCTTCTCGGCATTGGATaGAAAGGCCATGAGAACATCCGAATGATAGTCAAAGCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: QFNRRHSWQALLGIG*KGHENIRMIVKAAH
Trigger: ATGGGCAGCTTTGACTATCATTCGGATGTTCTCATGGCCTTTCAATCCAATGCCGAGAAGAGCCTGCCAGCTGTGCCTCCTGTTAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 90 bp TTCGGTAATCCTCACGGCTCTAAGACCACACATTTCTGCCTCGACTaGCTCGCCAAATGCTTCCCAGGTCTCCTTCTCGTGTTGAATATG +
Preference number: 6 (lower is better)
Translates to: FGNPHGSKTTHFCLD*LAKCFPGLLLVLNM
Trigger: CATATTCAACACGAGAAGGAGACCTGGGAAGCATTTGGCGAGCAAGTCGAGGCAGAAATGTGTGGTCTTAGAGCCGTGAGGATTACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GGCCTTGTTGAGCTGCGAGGTTCTGGATTCTGCTCTCTGGGATACTaGTTGATGTTGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTC +
Preference number: 6 (lower is better)
Translates to: GLVELRGSGFCSLGY*LMLLERSHQVVHPF
Trigger: GAATGGATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCAGAATCCAGAACCTCGCAGCTCAACAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp AGTGGCAAGGTTGAATCTGATGCTGCATTCCCAGGACTAGGGACCTaGCTGCTGGAAGCTGATTGCCGATTTGCATCTTCATTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SGKVESDAAFPGLGT*LLEADCRFASSFSW
Trigger: CCAAGAGAATGAAGATGCAAATCGGCAATCAGCTTCCAGCAGCAAGGTCCCTAGTCCTGGGAATGCAGCATCAGATTCAACCTTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TTCTTCATGGAGGGCCTCGTGAAGCTCAGGAAGGGGATCTTCGCTTaGTGCCTTCAGAGCCTGCAGCCTCTTTTTCAGCTTCTTGATTTT +
Preference number: 6 (lower is better)
Translates to: FFMEGLVKLRKGIFA*CLQSLQPLFQLLDF
Trigger: AAAATCAAGAAGCTGAAAAAGAGGCTGCAGGCTCTGAAGGCACAAAGCGAAGATCCCCTTCCTGAGCTTCACGAGGCCCTCCATGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp AAGGACGTCACAGATATTAAACACAGACTCCACCCCTGCACTGTGTaGTTCGATATCTCGCTGCAGATCCTGCTGCTCAGCAAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: KDVTDIKHRLHPCTV*FDISLQILLLSKPL
Trigger: AAGAGGCTTGCTGAGCAGCAGGATCTGCAGCGAGATATCGAACAACACAGTGCAGGGGTGGAGTCTGTGTTTAATATCTGTGACGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS TCA 72 bp CTGGCAGGCTCTTCTCGGCATTGGATTGAAAGGCCATaGGAACATCCGAATGATAGTCAAAGCTGCCCATCA +
Preference number: 6 (lower is better)
Translates to: LAGSSRHWIERP*EHPNDSQSCPS
Trigger: TGATGGGCAGCTTTGACTATCATTCGGATGTTCTCATGGCCTTTCAATCCAATGCCGAGAAGAGCCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp TGGCATCGTTTTCTGTGCTCCTGCATCTCAGGTGTCTaGGGAGCTGACGGAGTTTCACTAAGTCTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: WHRFLCSCISGV*GADGVSLSLLW
Trigger: CCAAAGAAGACTTAGTGAAACTCCGTCAGCTCCTCAGACACCTGAGATGCAGGAGCACAGAAAACGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp AACATGTCGGCCACAAGCTTCTGGAAAAACGCCTTGTaGTCTTGTAACTGGGCCTGCAAAGCAGCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: NMSATSFWKNAL*SCNWACKAALL
Trigger: GAGCAAAGCTGCTTTGCAGGCCCAGTTACAAGATCACAAGGCGTTTTTCCAGAAGCTTGTGGCCGACATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp TGCCTTGACGTAATAGCAGCTTTACATAGTCTGATTTaGAAGGCGTGCTGGCATCTGTGGGGACTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: CLDVIAALHSLI*KACWHLWGLVP
Trigger: AGGCACCAGTCCCCACAGATGCCAGCACGCCTTTCAAATCAGACTATGTAAAGCTGCTATTACGTCAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS GCA 72 bp CTGAAGGCCTCTTTCAGATTGTCTTTGTTGGATCTGTaGCTCATGCTGTCCATGTCAATCAGGTCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: LKASFRLSLLDL*LMLSMSIRSGR
Trigger: GCGACCAGACCTGATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp GGCGAGATCTTCCTCGAAAGTTGCCCAAGACATCAGTaGTCTTTGCAGTGTGGCCTTCGTGTTATGGATGTA +
Preference number: 6 (lower is better)
Translates to: GEIFLESCPRHQ*SLQCGLRVMDV
Trigger: TACATCCATAACACGAAGGCCACACTGCAAAGAGCACTGATGTCTTGGGCAACTTTCGAGGAAGATCTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTGACGTTGCTGAACCAGTCGTTAAAGTTCTTACACTaGTCGTTCAGGAACGTGGCAAAGTGGTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LTLLNQSLKFLH*SFRNVAKWSCS
Trigger: GCTGCAGGACCACTTTGCCACGTTCCTGAACGAGCAGTGTAAGAACTTTAACGACTGGTTCAGCAACGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GGCAGAACCAAGGCTTGCTCTTCTGTTTGGTTGAGATaGTGCGACTGTTCCAGAAGTTCAATGGCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: GRTKACSSVWLR*CDCSRSSMAAL
Trigger: AAGAGCAGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp CATCGGCATGGTCTCCATGTTGGAGGAGATCCAAGATaGATTTGGTTTGTGACTCCCAGATTGTCACCTGCT +
Preference number: 6 (lower is better)
Translates to: HRHGLHVGGDPR*IWFVTPRLSPA
Trigger: AGCAGGTGACAATCTGGGAGTCACAAACCAAATCCATCTTGGATCTCCTCCAACATGGAGACCATGCCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GACACTTGCGTACTGTCTTTTCAGTTCGGAGAGCTCTaGAGTGAGGCACCCTATTTGATTTTCCAGGACCGT +
Preference number: 6 (lower is better)
Translates to: DTCVLSFQFGEL*SEAPYLIFQDR
Trigger: ACGGTCCTGGAAAATCAAATAGGGTGCCTCACTCCAGAGCTCTCCGAACTGAAAAGACAGTACGCAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp GGGAGGCTGTGGGCAACCTCCACTGAAAGTGATTCTTaGATCTTCTCCAGAACTTGGATCCATCTTTCACAG +
Preference number: 6 (lower is better)
Translates to: GRLWATSTESDS*IFSRTWIHLSQ
Trigger: CTGTGAAAGATGGATCCAAGTTCTGGAGAAGATCCAAGAATCACTTTCAGTGGAGGTTGCCCACAGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp GGCTGTCAGGAACATGCCACGGGTGGCCCTCAGAAATaGATTTACCAGAAGATGCTTGCAAAGATTTTGTGG +
Preference number: 6 (lower is better)
Translates to: GCQEHATGGPQK*IYQKMLAKILW
Trigger: CCACAAAATCTTTGCAAGCATCTTCTGGTAAATCCATTTCTGAGGGCCACCCGTGGCATGTTCCTGACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085280.12
ENSMUST00000132161.2
CDS CAA 72 bp AGGACTTCCAACAGGTCCAGGAGGACATGCCCCTTCTaGATGTCTGCGAATAAGTCAGATACAACTGAGGGA +
Preference number: 6 (lower is better)
Translates to: RTSNRSRRTCPF*MSANKSDTTEG
Trigger: TCCCTCAGTTGTATCTGACTTATTCGCAGACATCAAGAAGGGGCATGTCCTCCTGGACCTGTTGGAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000142864.8
ENSMUST00000143031.8
ENSMUST00000148324.2
ENSMUST00000150317.8
CDS CAA 72 bp TTAATGGGTTCCATCGCCTTTTCAGTTGACAGCTGGTaGTCTGGTATCTCAAGTGGTACCTCGCCATCGGCA +
Preference number: 6 (lower is better)
Translates to: LMGSIAFSVDSW*SGISSGTSPSA
Trigger: TGCCGATGGCGAGGTACCACTTGAGATACCAGACAACCAGCTGTCAACTGAAAAGGCGATGGAACCCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTCCATGCCACCGGTTCCAGAATCGTTTTCTTCTCTTaGCTCTTCGGTAATCCTCACGGCTCTAAGACCACA +
Preference number: 6 (lower is better)
Translates to: LHATGSRIVFFS*LFGNPHGSKTT
Trigger: TGTGGTCTTAGAGCCGTGAGGATTACCGAAGAGCAAAGAGAAGAAAACGATTCTGGAACCGGTGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GTTCTGCCCGTTCTGGGTGGCCTTCCGGTGCCAAGTTaGGGAAAGAAGTTGAGATTTGTTCAAATACACGCT +
Preference number: 6 (lower is better)
Translates to: VLPVLGGLPVPS*GKKLRFVQIHA
Trigger: AGCGTGTATTTGAACAAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAGGCCACCCAGAACGGGCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGGCCTACTTCTCTCCACGGTGGACTCAAAAGCTCCTaGTTCTCTAGGAAAGTCCAGGAGTGCAGCTTCAAT +
Preference number: 6 (lower is better)
Translates to: RPTSLHGGLKSS*FSRKVQECSFN
Trigger: ATTGAAGCTGCACTCCTGGACTTTCCTAGAGAACAAGGAGCTTTTGAGTCCACCGTGGAGAGAAGTAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GTTGAATCTGATGCTGCATTCCCAGGACTAGGGACCTaGCTGCTGGAAGCTGATTGCCGATTTGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: VESDAAFPGLGT*LLEADCRFASS
Trigger: TGAAGATGCAAATCGGCAATCAGCTTCCAGCAGCAAGGTCCCTAGTCCTGGGAATGCAGCATCAGATTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CAATGGCACGTCTCCCCCATCCATTGTCAGAGAACTTaGTCTCAACTCGTCCAGAGCTTTAGATTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: QWHVSPIHCQRT*SQLVQSFRFQG
Trigger: GCCCTGAAATCTAAAGCTCTGGACGAGTTGAGACAAAGTTCTCTGACAATGGATGGGGGAGACGTGCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp ACAGATATTAAACACAGACTCCACCCCTGCACTGTGTaGTTCGATATCTCGCTGCAGATCCTGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: TDIKHRLHPCTV*FDISLQILLLS
Trigger: GCTGAGCAGCAGGATCTGCAGCGAGATATCGAACAACACAGTGCAGGGGTGGAGTCTGTGTTTAATATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CAA 90 bp GGGATCTTCAGCTCATGTTCTGCGATCCTGAAGGCCTCTTTCAGATaGTCTTTGTTGGATCTGTGCCTCATGCTGTCCATGTCAATCAGG +
Preference number: 6 (lower is better)
Translates to: GIFSSCSAILKASFR*SLLDLCLMLSMSIR
Trigger: CCTGATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 90 bp CCTCAAACTGTTCTGCCCGTTCTGGGTGGCCTTCCGGTGCCAAGTTaGGGAAAGAAGTTGAGATTTGTTCAAATACACGCTTCACATCCT +
Preference number: 6 (lower is better)
Translates to: PQTVLPVLGGLPVPS*GKKLRFVQIHASHP
Trigger: AGGATGTGAAGCGTGTATTTGAACAAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAGGCCACCCAGAACGGGCAGAACAGTTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CAACTTGGCCTTCGCTTCATCAAGCAAAGCCAGAACTaGGCACTTAGAGTCATGAAACTCCAGGAGTGGGAT +
Preference number: 6 (lower is better)
Translates to: QLGLRFIKQSQN*ALRVMKLQEWD
Trigger: ATCCCACTCCTGGAGTTTCATGACTCTAAGTGCTCAGTTCTGGCTTTGCTTGATGAAGCGAAGGCCAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp GGTTGTCCTTTCCCATGTAGGAAGCTTGCTGGGAGATaGTGCCCTCTTCCTTCTGAATCAAAGCTGTCAAGT +
Preference number: 6 (lower is better)
Translates to: GCPFPCRKLAGR*CPLPSESKLSS
Trigger: ACTTGACAGCTTTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GTGTTCAGGGAGGCTTCAGCCATCACCAGCTGGTCTTaGAAACCACTAAGGAGGCCATACTGTCTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: VFREASAITSWS*KPLRRPYCLSL
Trigger: TAAAGAAAGACAGTATGGCCTCCTTAGTGGTTTTCAAGACCAGCTGGTGATGGCTGAAGCCTCCCTGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TACCCAGAATGCCATCGTGAATCAGCTTGCACTTTCTaGTCTGAGAAAGGATGTTGTCAGGGAGAAGGGCGA +
Preference number: 6 (lower is better)
Translates to: YPECHRESACTF*SEKGCCQGEGR
Trigger: TCGCCCTTCTCCCTGACAACATCCTTTCTCAGATCAGAAAGTGCAAGCTGATTCACGATGGCATTCTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTTTCTGTGCTCCTGCATCTCAGGTGTCTGAGGAGCTaGCGGAGTTTCACTAAGTCTTCTTTGGTTGACAGG +
Preference number: 6 (lower is better)
Translates to: FSVLLHLRCLRS*RSFTKSSLVDR
Trigger: CCTGTCAACCAAAGAAGACTTAGTGAAACTCCGTCAGCTCCTCAGACACCTGAGATGCAGGAGCACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGCGAGGTTCTGGATTCTGCTCTCTGGGATACTTGTTaGTGTTGCTGGAAAGGAGCCATCAAGTTGTCCATC +
Preference number: 6 (lower is better)
Translates to: CEVLDSALWDTC*CCWKGAIKLSI
Trigger: GATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCAGAATCCAGAACCTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CTGAACTCCTTGAGCTTCTGCAGAAGATGTTTCACCTaGGACGCAGAACTCTTTGAGAGCTCGGTATCCTTG +
Preference number: 6 (lower is better)
Translates to: LNSLSFCRRCFT*DAELFESSVSL
Trigger: CAAGGATACCGAGCTCTCAAAGAGTTCTGCGTCTCAGGTGAAACATCTTCTGCAGAAGCTCAAGGAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp CCTCTTTCAGATTGTCTTTGTTGGATCTGTGCCTCATaGTGTCCATGTCAATCAGGTCTGGTCGCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: PLSDCLCWICAS*CPCQSGLVARH
Trigger: ATGCCTTGCGACCAGACCTGATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp AGGTCCTTATCCAGCCTGAGTAATGACTTTTTCCGATaGTTCACGGCTGGAGCAGTAGGATCCTTAAGACCA +
Preference number: 6 (lower is better)
Translates to: RSLSSLSNDFFR*FTAGAVGSLRP
Trigger: TGGTCTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGGAAAAAGTCATTACTCAGGCTGGATAAGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTCAGAGAGTCACTTAGCTGGGCCACAGTCTCAAACTaGTCCCTCTTCCTAGTCAATGCTTGGGAAAACAGA +
Preference number: 6 (lower is better)
Translates to: FRESLSWATVSN*SLFLVNAWENR
Trigger: TCTGTTTTCCCAAGCATTGACTAGGAAGAGGGAGCAGTTTGAGACTGTGGCCCAGCTAAGTGACTCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AAGACCACACATTTCTGCCTCGACTTGCTCGCCAAATaGTTCCCAGGTCTCCTTCTCGTGTTGAATATGTTG +
Preference number: 6 (lower is better)
Translates to: KTTHFCLDLLAK*FPGLLLVLNML
Trigger: CAACATATTCAACACGAGAAGGAGACCTGGGAAGCATTTGGCGAGCAAGTCGAGGCAGAAATGTGTGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp ACACGCTTCACATCCTTTATTTCCTTTAGGAAAGACTaGTGTGCCTGGATTTCGGCCTGGACCAGGTCCTTA +
Preference number: 6 (lower is better)
Translates to: TRFTSFISFRKD*CAWISAWTRSL
Trigger: TAAGGACCTGGTCCAGGCCGAAATCCAGGCACAGCAGTCTTTCCTAAAGGAAATAAAGGATGTGAAGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CAGTTTGGCGACTTGCTTCTCAGAGTTCTGCAGCTCTaGTGTATGCACATCTGCTTTCTGAAGCTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: QFGDLLLRVLQL*CMHICFLKLFA
Trigger: AGCAAACAGCTTCAGAAAGCAGATGTGCATACAGCAGAGCTGCAGAACTCTGAGAAGCAAGTCGCCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CATAGTTATCATCAAATTCTTCCCATTTCTGTAGCATaGTCTGAAGCTGCGCACCACGCAGGCAGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: HSYHQILPISVA*SEAAHHAGRPL
Trigger: AAGAGGCCTGCCTGCGTGGTGCGCAGCTTCAGAGCATGCTACAGAAATGGGAAGAATTTGATGATAACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS GCA 72 bp AAGGACGTCACAGATATTAAACACAGACTCCACCCCTaGACTGTGTTGTTCGATATCTCGCTGCAGATCCTG +
Preference number: 6 (lower is better)
Translates to: KDVTDIKHRLHP*TVLFDISLQIL
Trigger: CAGGATCTGCAGCGAGATATCGAACAACACAGTGCAGGGGTGGAGTCTGTGTTTAATATCTGTGACGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS GCA 72 bp GCTCATCTTCCTGCTGAGCCTCCTTTAAGCCTTCTTTaGTGTCATCGGTGCCTTGACGTAATAGCAGCTTTA +
Preference number: 6 (lower is better)
Translates to: AHLPAEPPLSLL*CHRCLDVIAAL
Trigger: TAAAGCTGCTATTACGTCAAGGCACCGATGACAGCAAAGAAGGCTTAAAGGAGGCTCAGCAGGAAGATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp CGAAAGTTGCCCAAGACATCAGTGCTCTTTGCAGTGTaGCCTTCGTGTTATGGATGTATTGTCTGCACGAGT +
Preference number: 6 (lower is better)
Translates to: RKLPKTSVLFAV*PSCYGCIVCTS
Trigger: ACTCGTGCAGACAATACATCCATAACACGAAGGCCACACTGCAAAGAGCACTGATGTCTTGGGCAACTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGAACCTGTTCATTCCCCTTTAATAAGTCTCTCTCCTaGTTAAGCACAGGCTTCTCCGCGTCGCTCATCAGT +
Preference number: 6 (lower is better)
Translates to: RTCSFPFNKSLS*LSTGFSASLIS
Trigger: ACTGATGAGCGACGCGGAGAAGCCTGTGCTTAACCAGGAGAGAGACTTATTAAAGGGGAATGAACAGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp ACTTCTGTTCAAATTGTGCTAAAGAGGCTCTCAGTGTaGCCGTGTCTGCCTCTTTCAGGTGGAGAAGTTGGT +
Preference number: 6 (lower is better)
Translates to: TSVQIVLKRLSV*PCLPLSGGEVG
Trigger: ACCAACTTCTCCACCTGAAAGAGGCAGACACGGCCACACTGAGAGCCTCTTTAGCACAATTTGAACAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CCA 72 bp GCTTTAGATTTCAGGGCAAGCTGGTTTTCTATATCCTaGCAGTCCAGTAACAGCTTCTCCATGGAGACGGCA +
Preference number: 6 (lower is better)
Translates to: ALDFRASWFSIS*QSSNSFSMETA
Trigger: TGCCGTCTCCATGGAGAAGCTGTTACTGGACTGCCAGGATATAGAAAACCAGCTTGCCCTGAAATCTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp TCTGCGATCCTGAAGGCCTCTTTCAGATTGTCTTTGTaGGATCTGTGCCTCATGCTGTCCATGTCAATCAGG +
Preference number: 6 (lower is better)
Translates to: SAILKASFRLSL*DLCLMLSMSIR
Trigger: CCTGATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp TCAGGAAACTCCCCACCTCATTCAAAGATGTGTGTTTaGTGTTCCACTGCAAGAGGGTCTCAACGGGAACCT +
Preference number: 6 (lower is better)
Translates to: SGNSPPHSKMCV*CSTARGSQREP
Trigger: AGGTTCCCGTTGAGACCCTCTTGCAGTGGAACACAAAACACACATCTTTGAATGAGGTGGGGAGTTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AAAGCCTGGTATCTATCGATCAGATGTGTGGATTCTTaGATTGTCTCTTCTCCCTCGGTGAGCCCATGCTCC +
Preference number: 6 (lower is better)
Translates to: KAWYLSIRCVDS*IVSSPSVSPCS
Trigger: GGAGCATGGGCTCACCGAGGGAGAAGAGACAATCAAAGAATCCACACATCTGATCGATAGATACCAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TTCTCAATGCCCCAGCTACTAACTCGTCATAGCGGTTaGCACTGTCATAAGCATCGTTCAGGACATCTGCAC +
Preference number: 6 (lower is better)
Translates to: FSMPQLLTRHSG*HCHKHRSGHLH
Trigger: GTGCAGATGTCCTGAACGATGCTTATGACAGTGCAAACCGCTATGACGAGTTAGTAGCTGGGGCATTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GGAGTTTCACTAAGTCTTCTTTGGTTGACAGGAGATTaGATGTTAGCGCCTTGCTCTGTTCCAGGCGCGCTA +
Preference number: 6 (lower is better)
Translates to: GVSLSLLWLTGD*MLAPCSVPGAL
Trigger: TAGCGCGCCTGGAACAGAGCAAGGCGCTAACATCAAATCTCCTGTCAACCAAAGAAGACTTAGTGAAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GGGCTTGGTTCCCGTCTGGGGCAGCCTCAGTTCCACTaGGTAAGTCATTATCTCAGCAATAGTCTTTTTCAT +
Preference number: 6 (lower is better)
Translates to: GLGSRLGQPQFH*VSHYLSNSLFH
Trigger: ATGAAAAAGACTATTGCTGAGATAATGACTTACCAAGTGGAACTGAGGCTGCCCCAGACGGGAACCAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GAGGCTCCACAAGCTGAGGTACGGAGGGATTTGGTCTaGATGTTAGTTCATGGTGAAGATACTGCCACTTGT +
Preference number: 6 (lower is better)
Translates to: EAPQAEVRRDLV*MLVHGEDTATC
Trigger: ACAAGTGGCAGTATCTTCACCATGAACTAACATCAAGACCAAATCCCTCCGTACCTCAGCTTGTGGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000148825.2
CDS CAA 72 bp ATCTCTGCTGTAACTGAGAAGGTGCTTAAGAAGGGTTaGCAGTCGGTGGAGCTCCTGGTCGATTCTCTTGTT +
Preference number: 6 (lower is better)
Translates to: ISAVTEKVLKKG*QSVELLVDSLV
Trigger: AACAAGAGAATCGACCAGGAGCTCCACCGACTGCAAACCCTTCTTAAGCACCTTCTCAGTTACAGCAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp CCATGTCTTCTAACAATGGCACGTCTCCCCCATCCATaGTCAGAGAACTTTGTCTCAACTCGTCCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: PCLLTMARLPHP*SENFVSTRPEL
Trigger: AAGCTCTGGACGAGTTGAGACAAAGTTCTCTGACAATGGATGGGGGAGACGTGCCATTGTTAGAAGACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp GTTGAATCTGATGCTGCATTCCCAGGACTAGGGACCTaGCTGGAAGCTGATTGCCGATTTGCATCTTCATTC +
Preference number: 6 (lower is better)
Translates to: VESDAAFPGLGT*LEADCRFASSF
Trigger: GAATGAAGATGCAAATCGGCAATCAGCTTCCAGCAAGGTCCCTAGTCCTGGGAATGCAGCATCAGATTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148825.2
CDS CAA 90 bp TTCAGCTCATGTTCTGCGATCCTGAAGGCCTCTTTCAGATTGTCTTaGTTGGATCTGTGCCTCATGCTGTCCATGTCAATCAGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: FSSCSAILKASFRLS*LDLCLMLSMSIRSG
Trigger: ACCAGACCTGATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 90 bp CTCGGCTATCTTCTTCTTCAGGTTGTCCTTTCCCATGTAGGAAGCTaGCTGGGAGATGATGCCCTCTTCCTTCTGAATCAAAGCTGTCAA +
Preference number: 6 (lower is better)
Translates to: LGYLLLQVVLSHVGS*LGDDALFLLNQSCQ
Trigger: TTGACAGCTTTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACCTGAAGAAGAAGATAGCCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GTACTGTCTTTTCAGTTCGGAGAGCTCTGGAGTGAGGCACCCTATTaGATTTTCCAGGACCGTCATACTGTGCTTCTGCTGAAAGATCTG +
Preference number: 6 (lower is better)
Translates to: VLSFQFGELWSEAPY*IFQDRHTVLLLKDL
Trigger: CAGATCTTTCAGCAGAAGCACAGTATGACGGTCCTGGAAAATCAAATAGGGTGCCTCACTCCAGAGCTCTCCGAACTGAAAAGACAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TGTCTCCATAAAGCCTGGTATCTATCGATCAGATGTGTGGATTCTTaGATTGTCTCTTCTCCCTCGGTGAGCCCATGCTCCTTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: CLHKAWYLSIRCVDS*IVSSPSVSPCSFRE
Trigger: CTCTCTGAAGGAGCATGGGCTCACCGAGGGAGAAGAGACAATCAAAGAATCCACACATCTGATCGATAGATACCAGGCTTTATGGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TGCCAAGGAGGTGTTCAGGGAGGCTTCAGCCATCACCAGCTGGTCTaGAAAACCACTAAGGAGGCCATACTGTCTTTCTTTAGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: CQGGVQGGFSHHQLV*KTTKEAILSFFSFL
Trigger: AAGAAAACTAAAGAAAGACAGTATGGCCTCCTTAGTGGTTTTCAAGACCAGCTGGTGATGGCTGAAGCCTCCCTGAACACCTCCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TGGGATCCGATCTCCGCAGGGACTATGCTGTACATCTCGGAATACTaGATGCGCAGTTTTTCCATAATGTTCTCGAAACTCAGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: WDPISAGTMLYISEY*MRSFSIMFSKLSLP
Trigger: AGGCAAGCTGAGTTTCGAGAACATTATGGAAAAACTGCGCATCAAGTATTCCGAGATGTACAGCATAGTCCCTGCGGAGATCGGATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CTTGTTGAGCTGCGAGGTTCTGGATTCTGCTCTCTGGGATACTTGTaGATGTTGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTCTTG +
Preference number: 6 (lower is better)
Translates to: LVELRGSGFCSLGYL*MLLERSHQVVHPFL
Trigger: CAAGAATGGATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCAGAATCCAGAACCTCGCAGCTCAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp AGGACAGCTCACAGATGCTGCCAGCTGTCTGCCTTCATTCAAGGTTaGGCAAAGCCGGGCATGCTTCCCATCAATGTTTCTTTTTATTTG +
Preference number: 6 (lower is better)
Translates to: RTAHRCCQLSAFIQG*AKPGMLPINVSFYL
Trigger: CAAATAAAAAGAAACATTGATGGGAAGCATGCCCGGCTTTGCCAAACCTTGAATGAAGGCAGACAGCTGGCAGCATCTGTGAGCTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 90 bp TTCTCATCAGGATTCACGACATCTACATCTTCTGGTTCCAGCAATTaGGGGATCTTCAGCTCATGTTCTGCGATCCTGAAGGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: FSSGFTTSTSSGSSN*GIFSSCSAILKASF
Trigger: GAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAGATCCCCAAATTGCTGGAACCAGAAGATGTAGATGTCGTGAATCCTGATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 90 bp TCAAGTCAAAAGAAGCCTTTAGTAGGGCGAGATCTTCCTCGAAAGTaGCCCAAGACATCAGTGCTCTTTGCAGTGTGGCCTTCGTGTTAT +
Preference number: 6 (lower is better)
Translates to: SSQKKPLVGRDLPRK*PKTSVLFAVWPSCY
Trigger: ATAACACGAAGGCCACACTGCAAAGAGCACTGATGTCTTGGGCAACTTTCGAGGAAGATCTCGCCCTACTAAAGGCTTCTTTTGACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TGCAGACAATTCTACCATGGTGATCTGAACTCCTTGTTTAGCTTCTaGGATCTTTGCCTGAAGGCCAGCTCTGAGGACATTTTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: CRQFYHGDLNSLFSF*DLCLKASSEDILEG
Trigger: CCCTTCCAAAATGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAATTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GTTCTTCAACACTGCAGACAATTCTACCATGGTGATCTGAACTCCTaGTTTAGCTTCTTGGATCTTTGCCTGAAGGCCAGCTCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: VLQHCRQFYHGDLNS*FSFLDLCLKASSED
Trigger: GTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAATTGTCTGCAGTGTTGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GTGGCAAAGTGGTCCTGCAGCGCGTTCTTTTTGGTATTAAATAGATaGCTGACACTTGCGTACTGTCTTTTCAGTTCGGAGAGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: VAKWSCSAFFLVLNR*LTLAYCLFSSESSG
Trigger: TCCAGAGCTCTCCGAACTGAAAAGACAGTACGCAAGTGTCAGCAATCTATTTAATACCAAAAAGAACGCGCTGCAGGACCACTTTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CTGACTGTCAGAGCATCAATACATTCTGGTAGCAACGTGGCTTCCTaGCCAGGCCAAGTCACAGCTTTCAGAAAATCATCCTTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: LTVRASIHSGSNVAS*PGQVTAFRKSSFLS
Trigger: TGACAAGAAGGATGATTTTCTGAAAGCTGTGACTTGGCCTGGCAAGGAAGCCACGTTGCTACCAGAATGTATTGATGCTCTGACAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GCTCTGCTCCAAATCCCTCTCCCTTTTGTAACGAAGGTGGAAACATaGTTGCCGAATAGGTTTGAATCAACAACATGTCGGCCACAAGCT +
Preference number: 6 (lower is better)
Translates to: ALLQIPLPFVTKVET*LPNRFESTTCRPQA
Trigger: AGCTTGTGGCCGACATGTTGTTGATTCAAACCTATTCGGCAACAATGTTTCCACCTTCGTTACAAAAGGGAGAGGGATTTGGAGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 90 bp CTGCTGGCCTTGATCAGCTGGTCGCCCATCTGCTTCAGCTGCAGTTaGTTTTCTGTGAATAAGCTGATTTCTTCCATACAGTCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: LLALISWSPICFSCS*FSVNKLISSIQSFC
Trigger: ACAGAAAGACTGTATGGAAGAAATCAGCTTATTCACAGAAAACAAACTGCAGCTGAAGCAGATGGGCGACCAGCTGATCAAGGCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS TCA 72 bp TCCTTCAACTTCTTCGTTCACTTTCAATTGTCCGGCTaGCTCTTCGTCTTCTACTTCCTGCTTTTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SFNFFVHFQLSG*LFVFYFLLFRS
Trigger: GCTGCGGAAAAGCAGGAAGTAGAAGACGAAGAGTCAGCCGGACAATTGAAAGTGAACGAAGAAGTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GCTGAAAGATCTGCTGTTGGATTTCCTCAAGCTTTGTaGAGATCTCCAGGCTATCAGAGGGAGACAAGGCAT +
Preference number: 6 (lower is better)
Translates to: AERSAVGFPQAL*RSPGYQRETRH
Trigger: ATGCCTTGTCTCCCTCTGATAGCCTGGAGATCTTCACAAAGCTTGAGGAAATCCAACAGCAGATCTTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGGACTCCATATTTTCTAATTCCAGTTCTTGACTCCTaGGCCAGCTGTCAAGCTCCTTCACGTGTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: WTPYFLIPVLDS*ASCQAPSRVLW
Trigger: CCAAAGCACACGTGAAGGAGCTTGACAGCTGGCTCAGGAGTCAAGAACTGGAATTAGAAAATATGGAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CCTTGGAGATATCATCCAGTGTGGAGCTTAGGTCTGTaGGGCAAACCTGGTAGGAACTGTGTTCTTGAACAT +
Preference number: 6 (lower is better)
Translates to: PWRYHPVWSLGL*GKPGRNCVLEH
Trigger: ATGTTCAAGAACACAGTTCCTACCAGGTTTGCCTCACAGACCTAAGCTCCACACTGGATGATATCTCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CTCTGTGACAGAAGCTTTCGTACTCTCCCACAAGGCTaGTGTGTCTTCACACTGTTGAATCACGTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: LCDRSFRTLPQG*CVFTLLNHVFL
Trigger: GAGAAAAACGTGATTCAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGTACGAAAGCTTCTGTCACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TCCTTCACGTGTGCTTTGGGTAAGAGCATCTTCACATaGTGTAGGACGGTCTCTACCTGCTGTATTTTACTG +
Preference number: 6 (lower is better)
Translates to: SFTCALGKSIFT*CRTVSTCCILL
Trigger: CAGTAAAATACAGCAGGTAGAGACCGTCCTACAGCATGTGAAGATGCTCTTACCCAAAGCACACGTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AGAACCAAGGCTTGCTCTTCTGTTTGGTTGAGATGCTaGGACTGTTCCAGAAGTTCAATGGCTGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: RTKACSSVWLRC*DCSRSSMAALL
Trigger: AAGAAGAGCAGCCATTGAACTTCTGGAACAGTCGCAGCATCTCAACCAAACAGAAGAGCAAGCCTTGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp ACCATGCAGGATGCACTCAGCCTCTTTCTGAAGCACTaGTGCTTTGTCATGGAATTCTCTGTAAGACTCCAT +
Preference number: 6 (lower is better)
Translates to: TMQDALSLFLKH*CFVMEFSVRLH
Trigger: ATGGAGTCTTACAGAGAATTCCATGACAAAGCAGCAGTGCTTCAGAAAGAGGCTGAGTGCATCCTGCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTCTTAGCTGCTAGAACTTCTAAAGTACAACGAAGTTaGTCTTTGGCCTCAGGGCTGGAGATAGCCCCCAAA +
Preference number: 6 (lower is better)
Translates to: FLAARTSKVQRS*SLASGLEIAPK
Trigger: TTTGGGGGCTATCTCCAGCCCTGAGGCCAAAGAGCAACTTCGTTGTACTTTAGAAGTTCTAGCAGCTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AGATCCGTGAAAATTGAATGTAGAAGGCTGTGTTTCTaGTCAGAATCTTCCAGAGCCATCTGGAGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RSVKIECRRLCF*SESSRAIWRVL
Trigger: CAGCACCCTCCAGATGGCTCTGGAAGATTCTGAGCAGAAACACAGCCTTCTACATTCAATTTTCACGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TCACACTCCGTTTCATTGGCACAGGCATCAGAGTCATaGAGAAGGACGTCACAGATATTAAACACAGACTCC +
Preference number: 6 (lower is better)
Translates to: SHSVSLAQASES*RRTSQILNTDS
Trigger: GGAGTCTGTGTTTAATATCTGTGACGTCCTTCTGCATGACTCTGATGCCTGTGCCAATGAAACGGAGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000131480.8
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
ENSMUST00000154509.8
CDS CCA 72 bp AACTTCTTGTCCTCAGGAGGTCCTTCCTCTTTACTCTaGCCATCCATGGCCACTAAGTTTACTGACAATGCA +
Preference number: 6 (lower is better)
Translates to: NFLSSGGPSSLL*PSMATKFTDNA
Trigger: TGCATTGTCAGTAAACTTAGTGGCCATGGATGGCCAGAGTAAAGAGGAAGGACCTCCTGAGGACAAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp AGGAGTTATTCAGTTCCCCTGCTCGGGCCTGGCATATaGACTCCATATTTTCTAATTCCAGTTCTTGACTCC +
Preference number: 6 (lower is better)
Translates to: RSYSVPLLGPGI*TPYFLIPVLDS
Trigger: GGAGTCAAGAACTGGAATTAGAAAATATGGAGTCCATATGCCAGGCCCGAGCAGGGGAACTGAATAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TGTTCTGCGATCCTGAAGGCCTCTTTCAGATTGTCTTaGTTGGATCTGTGCCTCATGCTGTCCATGTCAATC +
Preference number: 6 (lower is better)
Translates to: CSAILKASFRLS*LDLCLMLSMSI
Trigger: GATTGACATGGACAGCATGAGGCACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp GGATTCACGACATCTACATCTTCTGGTTCCAGCAATTaGGGGATCTTCAGCTCATGTTCTGCGATCCTGAAG +
Preference number: 6 (lower is better)
Translates to: GFTTSTSSGSSN*GIFSSCSAILK
Trigger: CTTCAGGATCGCAGAACATGAGCTGAAGATCCCCAAATTGCTGGAACCAGAAGATGTAGATGTCGTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp CACTGCAGACAATTCTACCATGGTGATCTGAACTCCTaGTTTAGCTTCTTGGATCTTTGCCTGAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: HCRQFYHGDLNS*FSFLDLCLKAS
Trigger: GCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAATTGTCTGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTTCTTCTTCAGGTTGTCCTTTCCCATGTAGGAAGCTaGCTGGGAGATGATGCCCTCTTCCTTCTGAATCAA +
Preference number: 6 (lower is better)
Translates to: LLLQVVLSHVGS*LGDDALFLLNQ
Trigger: TTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACCTGAAGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGGTTGATTCTGCAGCTCGTTGACTTCCCGCTCATCTaGGGCGTTTTGCATGCTTTCTTGAACATTGAGAGA +
Preference number: 6 (lower is better)
Translates to: RLILQLVDFPLI*GVLHAFLNIER
Trigger: TCTCTCAATGTTCAAGAAAGCATGCAAAACGCCCAAGATGAGCGGGAAGTCAACGAGCTGCAGAATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTAGCTTCTCTCGGAATTCCTTTTCGCCCATTTCTCTaGGTTGCAATTCTAGCAGCATGTTCTGGAGAGCCT +
Preference number: 6 (lower is better)
Translates to: LASLGIPFRPFL*VAILAACSGEP
Trigger: AGGCTCTCCAGAACATGCTGCTAGAATTGCAACCAAGAGAAATGGGCGAAAAGGAATTCCGAGAGAAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GGTTCTGGATTCTGCTCTCTGGGATACTTGTTGATGTaGCTGGAAAGGAGCCATCAAGTTGTCCATCCATTC +
Preference number: 6 (lower is better)
Translates to: GSGFCSLGYLLM*LERSHQVVHPF
Trigger: GAATGGATGGACAACTTGATGGCTCCTTTCCAGCAACATCAACAAGTATCCCAGAGAGCAGAATCCAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGATCATTGTATTCTTCCATCTTGATCGTGGCCTTGTaGAGCTGCGAGGTTCTGGATTCTGCTCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: RSLYSSILIVAL*SCEVLDSALWD
Trigger: ATCCCAGAGAGCAGAATCCAGAACCTCGCAGCTCAACAAGGCCACGATCAAGATGGAAGAATACAATGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGAGCATCAATACATTCTGGTAGCAACGTGGCTTCCTaGCCAGGCCAAGTCACAGCTTTCAGAAAATCATCC +
Preference number: 6 (lower is better)
Translates to: RASIHSGSNVAS*PGQVTAFRKSS
Trigger: GGATGATTTTCTGAAAGCTGTGACTTGGCCTGGCAAGGAAGCCACGTTGCTACCAGAATGTATTGATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTGGAGCAGCGACTGGTTAACAAAGTCAACTACCCATaGCTTGTAGTCCATTTCCATCCTGAACTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: LEQRLVNKVNYP*LVVHFHPELLE
Trigger: CTCAAGGAGTTCAGGATGGAAATGGACTACAAGCAATGGGTAGTTGACTTTGTTAACCAGTCGCTGCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp GAGCTGGTGGACCTGGCTGGTCACGTTATTCTTCTTTaGAAACAGCTCAACAATTCCAGATGCCATGTCTTC +
Preference number: 6 (lower is better)
Translates to: ELVDLAGHVILL*KQLNNSRCHVF
Trigger: GAAGACATGGCATCTGGAATTGTTGAGCTGTTTCAAAAGAAGAATAACGTGACCAGCCAGGTCCACCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CAA 90 bp AGATACTTGGCCAGACTATTGGTATTAAGAATTTCCAATGCTTCCTaGTACTTCAAGAGGAATCCACCAGGGCGCTCTCTTTGCCCGAGT +
Preference number: 6 (lower is better)
Translates to: RYLARLLVLRISNAS*YFKRNPPGRSLCPS
Trigger: ACTCGGGCAAAGAGAGCGCCCTGGTGGATTCCTCTTGAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CCACCGGGGACAGTACGCTTCAGTTCTTCAACAGCTCGAAGATACTaGGCCAGACTATTGGTATTAAGAATTTCCAATGCTTCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: PPGTVRFSSSTARRY*ARLLVLRISNASLY
Trigger: GTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACTGAAGCGTACTGTCCCCGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TGCTCGTTCAGGAACGTGGCAAAGTGGTCCTGCAGCGCGTTCTTTTaGGTATTAAATAGATTGCTGACACTTGCGTACTGTCTTTTCAGT +
Preference number: 6 (lower is better)
Translates to: CSFRNVAKWSCSAFF*VLNRLLTLAYCLFS
Trigger: ACTGAAAAGACAGTACGCAAGTGTCAGCAATCTATTTAATACCAAAAAGAACGCGCTGCAGGACCACTTTGCCACGTTCCTGAACGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CTGCCCGTTCTGGGTGGCCTTCCGGTGCCAAGTTTGGGAAAGAAGTaGAGATTTGTTCAAATACACGCTTCACATCCTTTATTTCCTTTA +
Preference number: 6 (lower is better)
Translates to: LPVLGGLPVPSLGKK*RFVQIHASHPLFPL
Trigger: TAAAGGAAATAAAGGATGTGAAGCGTGTATTTGAACAAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAGGCCACCCAGAACGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CTGCTCCAAATCCCTCTCCCTTTTGTAACGAAGGTGGAAACATTGTaGCCGAATAGGTTTGAATCAACAACATGTCGGCCACAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: LLQIPLPFVTKVETL*PNRFESTTCRPQAS
Trigger: AGAAGCTTGTGGCCGACATGTTGTTGATTCAAACCTATTCGGCAACAATGTTTCCACCTTCGTTACAAAAGGGAGAGGGATTTGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp GCAATTTGGGGATCTTCAGCTCATGTTCTGCGATCCTaGAGGCCTCTTTCAGATTGTCTTTGTTGGATCTGT +
Preference number: 6 (lower is better)
Translates to: AIWGSSAHVLRS*RPLSDCLCWIC
Trigger: ACAGATCCAACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAGATCCCCAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp CATCCGAATGATAGTCAAAGCTGCCCATCAGACTCTTaGATGAAGATAGTTTCCCTTGGATCAGAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: HPNDSQSCPSDS*MKIVSLGSESW
Trigger: CCAGGACTCTGATCCAAGGGAAACTATCTTCATTCAAGAGTCTGATGGGCAGCTTTGACTATCATTCGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp CCGCGTCGCTCATCAGTCTTCTTAAATTCAGTGAAGTaGTTTCAAACTTCTCCCAGTGAGCATCAGTGTCAG +
Preference number: 6 (lower is better)
Translates to: PRRSSVFLNSVK*FQTSPSEHQCQ
Trigger: CTGACACTGATGCTCACTGGGAGAAGTTTGAAATCACTTCACTGAATTTAAGAAGACTGATGAGCGACGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTTCTTCTTCCAATCCATCTAGGTCCTTATCCAGCCTaGGTAATGACTTTTTCCGATGCTTCACGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: FLLPIHLGPYPA*VMTFSDASRLE
Trigger: CTCCAGCCGTGAAGCATCGGAAAAAGTCATTACTCAGGCTGGATAAGGACCTAGATGGATTGGAAGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TCCATGACCTGCAGTTCAAGTGGTTTCTCATTGCTCTaGAGCAACGACTGTATGTCAGCCACTCTTCTAGAA +
Preference number: 6 (lower is better)
Translates to: SMTCSSSGFSLL*SNDCMSATLLE
Trigger: TTCTAGAAGAGTGGCTGACATACAGTCGTTGCTTCAGAGCAATGAGAAACCACTTGAACTGCAGGTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGGCATATGGACTCCATATTTTCTAATTCCAGTTCTTaGCTCCTGAGCCAGCTGTCAAGCTCCTTCACGTGT +
Preference number: 6 (lower is better)
Translates to: WHMDSIFSNSSS*LLSQLSSSFTC
Trigger: ACACGTGAAGGAGCTTGACAGCTGGCTCAGGAGTCAAGAACTGGAATTAGAAAATATGGAGTCCATATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGCAAATACTTTTCTCCTTCTAGTACAAGCTTTTCTTaGTGGCTGAGGTATGTGTTGGCGAGGTGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: CKYFSPSSTSFS*WLRYVLARWSV
Trigger: CACGCTCCACCTCGCCAACACATACCTCAGCCATCAAGAAAAGCTTGTACTAGAAGGAGAAAAGTATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp AGGCCATACTGTCTTTCTTTAGTTTTCTTCAAGGTATaGAGCTCCTGCTGTAGACTGCCCAAGTGGCACACT +
Preference number: 6 (lower is better)
Translates to: RPYCLSLVFFKV*SSCCRLPKWHT
Trigger: AGTGTGCCACTTGGGCAGTCTACAGCAGGAGCTTCATACCTTGAAGAAAACTAAAGAAAGACAGTATGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GACTCCATCTTCTGCTTGAGTTCGCTACCGTTGTTTTaGAGGAATCTCTGTGTTCTGTTGGTCCTTGCTTTG +
Preference number: 6 (lower is better)
Translates to: DSIFCLSSLPLF*RNLCVLLVLAL
Trigger: CAAAGCAAGGACCAACAGAACACAGAGATTCCTTCAAAACAACGGTAGCGAACTCAAGCAGAAGATGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TTTTCCATAATGTTCTCGAAACTCAGCTTGCCTTTCTaGAGAATGCTCCGCAGCTCCTCAAACTGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: FSIMFSKLSLPF*RMLRSSSNCSA
Trigger: GGCAGAACAGTTTGAGGAGCTGCGGAGCATTCTTCAGAAAGGCAAGCTGAGTTTCGAGAACATTATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGGTTCCAGCAATTTGGGGATCTTCAGCTCATGTTCTaGGATCCTGAAGGCCTCTTTCAGATTGTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: WFQQFGDLQLMF*DPEGLFQIVFV
Trigger: AACAAAGACAATCTGAAAGAGGCCTTCAGGATCGCAGAACATGAGCTGAAGATCCCCAAATTGCTGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS GCA 72 bp ATGCAGGATGCACTCAGCCTCTTTCTGAAGCACTGCTaGTTTGTCATGGAATTCTCTGTAAGACTCCATCTT +
Preference number: 6 (lower is better)
Translates to: MQDALSLFLKHC*FVMEFSVRLHL
Trigger: AAGATGGAGTCTTACAGAGAATTCCATGACAAAGCAGCAGTGCTTCAGAAAGAGGCTGAGTGCATCCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GCTGAGCCTCCTTTAAGCCTTCTTTGCTGTCATCGGTaGCTTGACGTAATAGCAGCTTTACATAGTCTGATT +
Preference number: 6 (lower is better)
Translates to: AEPPLSLLCCHR*LDVIAALHSLI
Trigger: AATCAGACTATGTAAAGCTGCTATTACGTCAAGGCACCGATGACAGCAAAGAAGGCTTAAAGGAGGCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000132161.2
ENSMUST00000139204.8
ENSMUST00000143031.8
CDS CCA 72 bp ACATCCTTTATTTCCTTTAGGAAAGACTGCTGTGCCTaGATTTCGGCCTGGACCAGGTCCTTATTCTTTCGA +
Preference number: 6 (lower is better)
Translates to: TSFISFRKDCCA*ISAWTRSLFFR
Trigger: TCGAAAGAATAAGGACCTGGTCCAGGCCGAAATCCAGGCACAGCAGTCTTTCCTAAAGGAAATAAAGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGGAACGTGGCAAAGTGGTCCTGCAGCGCGTTCTTTTaGGTATTAAATAGATTGCTGACACTTGCGTACTGT +
Preference number: 6 (lower is better)
Translates to: RNVAKWSCSAFF*VLNRLLTLAYC
Trigger: ACAGTACGCAAGTGTCAGCAATCTATTTAATACCAAAAAGAACGCGCTGCAGGACCACTTTGCCACGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTGGGTGGCCTTCCGGTGCCAAGTTTGGGAAAGAAGTaGAGATTTGTTCAAATACACGCTTCACATCCTTTA +
Preference number: 6 (lower is better)
Translates to: LGGLPVPSLGKK*RFVQIHASHPL
Trigger: TAAAGGATGTGAAGCGTGTATTTGAACAAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAGGCCACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CGGCAATTTCTCCATCTGAAGCTGGTGAAGTTTCTCTaGTATGTCTGGAAGCTGAGTTATGAGCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: RQFLHLKLVKFL*YVWKLSYEHCP
Trigger: TGGACAGTGCTCATAACTCAGCTTCCAGACATACAAGAGAAACTTCACCAGCTTCAGATGGAGAAATTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 90 bp GTTCAGCTTGGAATGCCAGAGGTCGAGCTCATCCCATATTTTCTTTaGGATTTCGTGAGCTTCCTCAATGTTTCTGCTTTTCTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: VQLGMPEVELIPYFL*DFVSFLNVSAFLLQ
Trigger: CTGCAACAGAAAAGCAGAAACATTGAGGAAGCTCACGAAATCCAAAAGAAAATATGGGATGAGCTCGACCTCTGGCATTCCAAGCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TATGTTGCTTCTGATTGTATTCAGGTCCTGGGACACGTTGAGGGATaGTTCTTTCCAGTAATTCAACGTTTGCTGAGAAGTCTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: YVASDCIQVLGHVEG*FFPVIQRLLRSLQP
Trigger: TGGCTGGAGACTTCTCAGCAAACGTTGAATTACTGGAAAGAACAATCCCTCAACGTGTCCCAGGACCTGAATACAATCAGAAGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp TATAGTGTCAAACACTTCTTCAGATGTCAACACTTGTaGGAGACTGCCTCGAATAGCAGCCAGCTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: YSVKHFFRCQHL*ETASNSSQLVS
Trigger: AGAGACAAGCTGGCTGCTATTCGAGGCAGTCTCTCACAAGTGTTGACATCTGAAGAAGTGTTTGACACTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GGTTGCAATTCTAGCAGCATGTTCTGGAGAGCCTCTTaGAGCCTAGAATTCTCTTCTGCACATAGCTTTAGT +
Preference number: 6 (lower is better)
Translates to: GCNSSSMFWRAS*SLEFSSAHSFS
Trigger: ACTAAAGCTATGTGCAGAAGAGAATTCTAGGCTTCAAGAGGCTCTCCAGAACATGCTGCTAGAATTGCAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGGGTGGCCTTCCGGTGCCAAGTTTGGGAAAGAAGTTaGGATTTGTTCAAATACACGCTTCACATCCTTTAT +
Preference number: 6 (lower is better)
Translates to: WVAFRCQVWERS*DLFKYTLHILY
Trigger: ATAAAGGATGTGAAGCGTGTATTTGAACAAATCTCAACTTCTTTCCCAAACTTGGCACCGGAAGGCCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CTGATATACGTCTCTTCCGTCATACTTCCCTGTGTCTaGATAGTGTTTGCTTCTTGGCGTAGCTCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: LIYVSSVILPCV*IVFASWRSSSS
Trigger: ACTTGAAGAGCTACGCCAAGAAGCAAACACTATTCAGACACAGGGAAGTATGACGGAAGAGACGTATATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000148825.2
CDS GCA 72 bp CCCACCTCATTCAAAGATGTGTGTTTTGTGTTCCACTaGAAGAGGGTCTCAACGGGAACCTCTTTAATTTGT +
Preference number: 6 (lower is better)
Translates to: PTSFKDVCFVFH*KRVSTGTSLIC
Trigger: ACAAATTAAAGAGGTTCCCGTTGAGACCCTCTTGCAGTGGAACACAAAACACACATCTTTGAATGAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AGCAGATCCTCCTTCTTCTGGTTTAGATTCAGAATCTaGTTTTCCAACCTTTCCATCTCTCCCTGTAACGAC +
Preference number: 6 (lower is better)
Translates to: SRSSFFWFRFRI*FSNLSISPCND
Trigger: GTCGTTACAGGGAGAGATGGAAAGGTTGGAAAAGCAGATTCTGAATCTAAACCAGAAGAAGGAGGATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TGCTCTTTGCAGTGTGGCCTTCGTGTTATGGATGTATaGTCTGCACGAGTGAACATTCTTTTCCAGCATCAT +
Preference number: 6 (lower is better)
Translates to: CSLQCGLRVMDV*SARVNILFQHH
Trigger: ATGATGCTGGAAAAGAATGTTCACTCGTGCAGACAATACATCCATAACACGAAGGCCACACTGCAAAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GCCAGACTATTGGTATTAAGAATTTCCAATGCTTCCTaGTACTTCAAGAGGAATCCACCAGGGCGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: ARLLVLRISNAS*YFKRNPPGRSL
Trigger: AAGAGAGCGCCCTGGTGGATTCCTCTTGAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TGGTCCTGCAGCGCGTTCTTTTTGGTATTAAATAGATaGCTGACACTTGCGTACTGTCTTTTCAGTTCGGAG +
Preference number: 6 (lower is better)
Translates to: WSCSAFFLVLNR*LTLAYCLFSSE
Trigger: CTCCGAACTGAAAAGACAGTACGCAAGTGTCAGCAATCTATTTAATACCAAAAAGAACGCGCTGCAGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CTTCCAACTTCAGTTCTAGTTGCTGGGACCTCTCAGTaGATTTTAAAAGCAGTGCTTGGTGTTGGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LPTSVLVAGTSQ*ILKAVLGVGSV
Trigger: TACAGAGCCAACACCAAGCACTGCTTTTAAAATCAACTGAGAGGTCCCAGCAACTAGAACTGAAGTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp ATCTCCGCAGGGACTATGCTGTACATCTCGGAATACTaGATGCGCAGTTTTTCCATAATGTTCTCGAAACTC +
Preference number: 6 (lower is better)
Translates to: ISAGTMLYISEY*MRSFSIMFSKL
Trigger: GAGTTTCGAGAACATTATGGAAAAACTGCGCATCAAGTATTCCGAGATGTACAGCATAGTCCCTGCGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp ATCCCTCTCCCTTTTGTAACGAAGGTGGAAACATTGTaGCCGAATAGGTTTGAATCAACAACATGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: IPLPFVTKVETL*PNRFESTTCRP
Trigger: TGGCCGACATGTTGTTGATTCAAACCTATTCGGCAACAATGTTTCCACCTTCGTTACAAAAGGGAGAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 90 bp GCCATTATTTGGTCCTTAGATCCATCACAAAGACTGAAATATTCCTaGGAGATATCATCCAGTGTGGAGCTTAGGTCTGTGAGGCAAACC +
Preference number: 6 (lower is better)
Translates to: AIIWSLDPSQRLKYS*EISSSVELRSVRQT
Trigger: GGTTTGCCTCACAGACCTAAGCTCCACACTGGATGATATCTCCAAGGAATATTTCAGTCTTTGTGATGGATCTAAGGACCAAATAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp CGCTGCATCTCGCTCTCTTTGAACGAGTCGTCAAAAGCCTCGTTTTaGCTTAATTTCCTGATTATCTCATCACGCAAGCGTTTGGATTTT +
Preference number: 6 (lower is better)
Translates to: RCISLSLNESSKASF*LNFLIISSRKRLDF
Trigger: AAAATCCAAACGCTTGCGTGATGAGATAATCAGGAAATTAAGCAAAAACGAGGCTTTTGACGACTCGTTCAAAGAGAGCGAGATGCAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CAGACTATGATACTTGTTACAGTAGGTCTCACTTGCTaGGTCCTTCAGCATCTTCTGGAATCTCTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: QTMILVTVGLTC*VLQHLLESLLL
Trigger: CAAGAGAAGAGATTCCAGAAGATGCTGAAGGACTCAGCAAGTGAGACCTACTGTAACAAGTATCATAGTCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp TCATCAAGCAAAGCCAGAACTGAGCACTTAGAGTCATaGAACTCCAGGAGTGGGATGAAGTTTTTACCCAAA +
Preference number: 6 (lower is better)
Translates to: SSSKARTEHLES*NSRSGMKFLPK
Trigger: TTTGGGTAAAAACTTCATCCCACTCCTGGAGTTTCATGACTCTAAGTGCTCAGTTCTGGCTTTGCTTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS TCA 72 bp GTGGCCTTCGTGTTATGGATGTATTGTCTGCACGAGTaGACATTCTTTTCCAGCATCATATACTCCTCTCTA +
Preference number: 6 (lower is better)
Translates to: VAFVLWMYCLHE*TFFSSIIYSSL
Trigger: TAGAGAGGAGTATATGATGCTGGAAAAGAATGTTCACTCGTGCAGACAATACATCCATAACACGAAGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp CTTAAATTCAGTGAAGTGATTTCAAACTTCTCCCAGTaGGCATCAGTGTCAGCCAGTAAGACCTGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: LKFSEVISNFSQ*ASVSASKTCSS
Trigger: AGAACTGCAGGTCTTACTGGCTGACACTGATGCTCACTGGGAGAAGTTTGAAATCACTTCACTGAATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp GGCGACATCAGTGTTTCGCTTTCTTCAAGCGTGAGCTaGACCTTACCTATAATCGCAAACAGTTTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: GDISVSLSSSVS*TLPIIANSLLF
Trigger: AAAAAGCAAACTGTTTGCGATTATAGGTAAGGTTCAGCTCACGCTTGAAGAAAGCGAAACACTGATGTCGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TGTTGCTGTAAAGCGGCCACCTGGTCACTTAACTCGTaGATGGTCTGGATTAAGTCATCTGTTTCAAAAATG +
Preference number: 6 (lower is better)
Translates to: CCCKAATWSLNS*MVWIKSSVSKM
Trigger: CATTTTTGAAACAGATGACTTAATCCAGACCATTCACGAGTTAAGTGACCAGGTGGCCGCTTTACAGCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp AAGATGGATTTGGTTTGTGACTCCCAGATTGTCACCTaGTTGATGAGTCCTTCAACTTCTTCGTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: KMDLVCDSQIVT*LMSPSTSSFTF
Trigger: GAAAGTGAACGAAGAAGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGAGTCACAAACCAAATCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp CTAATACTCTGCCCACTGATTTCGTTCAAAGACTGTTaGAAAGCCGTCTTCTTCTTGATGAGTTGGCTGTAT +
Preference number: 6 (lower is better)
Translates to: LILCPLISFKDC*KAVFFLMSWLY
Trigger: ATACAGCCAACTCATCAAGAAGAAGACGGCTTTGCAACAGTCTTTGAACGAAATCAGTGGGCAGAGTATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TTCTTGACCCAGGACAGAGTCTCCTTTATCCTGTTCTaGAGCTCACACTTTTTAATCCGATTTTCTACCTCT +
Preference number: 6 (lower is better)
Translates to: FLTQDRVSFILF*SSHFLIRFSTS
Trigger: AGAGGTAGAAAATCGGATTAAAAAGTGTGAGCTCCAGAACAGGATAAAGGAGACTCTGTCCTGGGTCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp ACAGCAGACTATGATACTTGTTACAGTAGGTCTCACTaGCTGAGTCCTTCAGCATCTTCTGGAATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: TADYDTCYSRSH*LSPSASSGISS
Trigger: AGAAGAGATTCCAGAAGATGCTGAAGGACTCAGCAAGTGAGACCTACTGTAACAAGTATCATAGTCTGCTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp TCCAGGAGTGGGATGAAGTTTTTACCCAAAACGTTGTaGATTCGTCTTGTCATCTCCTCCAGTTTAACAGGA +
Preference number: 6 (lower is better)
Translates to: SRSGMKFLPKTL*IRLVISSSLTG
Trigger: TCCTGTTAAACTGGAGGAGATGACAAGACGAATCAACAACGTTTTGGGTAAAAACTTCATCCCACTCCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp TGGTCCTTAGATCCATCACAAAGACTGAAATATTCCTaGGAGATATCATCCAGTGTGGAGCTTAGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: WSLDPSQRLKYS*EISSSVELRSV
Trigger: CACAGACCTAAGCTCCACACTGGATGATATCTCCAAGGAATATTTCAGTCTTTGTGATGGATCTAAGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TCGCTCTCTTTGAACGAGTCGTCAAAAGCCTCGTTTTaGCTTAATTTCCTGATTATCTCATCACGCAAGCGT +
Preference number: 6 (lower is better)
Translates to: SLSLNESSKASF*LNFLIISSRKR
Trigger: ACGCTTGCGTGATGAGATAATCAGGAAATTAAGCAAAAACGAGGCTTTTGACGACTCGTTCAAAGAGAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp GGAATGCCAGAGGTCGAGCTCATCCCATATTTTCTTTaGGATTTCGTGAGCTTCCTCAATGTTTCTGCTTTT +
Preference number: 6 (lower is better)
Translates to: GMPEVELIPYFL*DFVSFLNVSAF
Trigger: AAAAGCAGAAACATTGAGGAAGCTCACGAAATCCAAAAGAAAATATGGGATGAGCTCGACCTCTGGCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp CAAATCCCTCTCCCTTTTGTAACGAAGGTGGAAACATaGTTGCCGAATAGGTTTGAATCAACAACATGTCGG +
Preference number: 6 (lower is better)
Translates to: QIPLPFVTKVET*LPNRFESTTCR
Trigger: CCGACATGTTGTTGATTCAAACCTATTCGGCAACAATGTTTCCACCTTCGTTACAAAAGGGAGAGGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS CAA 72 bp TCTGATTGTATTCAGGTCCTGGGACACGTTGAGGGATaGTTCTTTCCAGTAATTCAACGTTTGCTGAGAAGT +
Preference number: 6 (lower is better)
Translates to: SDCIQVLGHVEG*FFPVIQRLLRS
Trigger: ACTTCTCAGCAAACGTTGAATTACTGGAAAGAACAATCCCTCAACGTGTCCCAGGACCTGAATACAATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000085280.12
ENSMUST00000143031.8
CDS TCA 72 bp GCTGCGTTTGTTTTGGAAATTTCTGGAAGGTCCTCCTaGAGAGTCTCTAAAATTATTGCTTCTCGCTCAATC +
Preference number: 6 (lower is better)
Translates to: AAFVLEISGRSS*RVSKIIASRSI
Trigger: GATTGAGCGAGAAGCAATAATTTTAGAGACTCTTCAGGAGGACCTTCCAGAAATTTCCAAAACAAACGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTTGCAGTGTGGCCTTCGTGTTATGGATGTATTGTCTaGACGAGTGAACATTCTTTTCCAGCATCATATACT +
Preference number: 6 (lower is better)
Translates to: FAVWPSCYGCIV*TSEHSFPASYT
Trigger: AGTATATGATGCTGGAAAAGAATGTTCACTCGTGCAGACAATACATCCATAACACGAAGGCCACACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp GATTTAAGGATGCTGTTGAGACCGTTTTCAGTCTCCTaGTTGGCAGATTCGATTCTGTTTTCCAAATCCTTT +
Preference number: 6 (lower is better)
Translates to: DLRMLLRPFSVS*LADSILFSKSF
Trigger: AAAGGATTTGGAAAACAGAATCGAATCTGCCAAGCAGGAGACTGAAAACGGTCTCAACAGCATCCTTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AACTCCAGGAGTGGGATGAAGTTTTTACCCAAAACGTaGTTGATTCGTCTTGTCATCTCCTCCAGTTTAACA +
Preference number: 6 (lower is better)
Translates to: NSRSGMKFLPKT*LIRLVISSSLT
Trigger: TGTTAAACTGGAGGAGATGACAAGACGAATCAACAACGTTTTGGGTAAAAACTTCATCCCACTCCTGGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
ENSMUST00000150317.8
CDS CAA 72 bp ATGGATTTGGTTTGTGACTCCCAGATTGTCACCTGCTaGATGAGTCCTTCAACTTCTTCGTTCACTTTCAAT +
Preference number: 6 (lower is better)
Translates to: MDLVCDSQIVTC*MSPSTSSFTFN
Trigger: ATTGAAAGTGAACGAAGAAGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGAGTCACAAACCAAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp TTCTCTGTAAGACTCCATCTTCTGCTTGAGTTCGCTACCGTTGTTTaGAAGGAATCTCTGTGTTCTGTTGGTCCTTGCTTTGAGATTTTT +
Preference number: 6 (lower is better)
Translates to: FSVRLHLLLEFATVV*KESLCSVGPCFEIF
Trigger: AAAAATCTCAAAGCAAGGACCAACAGAACACAGAGATTCCTTCAAAACAACGGTAGCGAACTCAAGCAGAAGATGGAGTCTTACAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 90 bp GTACGCTTCAGTTCTTCAACAGCTCGAAGATACTTGGCCAGACTATaGGTATTAAGAATTTCCAATGCTTCCTTGTACTTCAAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: VRFSSSTARRYLARL*VLRISNASLYFKRN
Trigger: ATTCCTCTTGAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACTGAAGCGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TCTTTTATTGAGCCTTCTCAGTTCTTTAGAAATAGATaGGGCAACTTCTCTACTGCTGACTCCAATCAGGAA +
Preference number: 6 (lower is better)
Translates to: SFIEPSQFFRNR*GNFSTADSNQE
Trigger: TTCCTGATTGGAGTCAGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAACTGAGAAGGCTCAATAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TGTATGTCAGCCACTCTTCTAGAAAATTCTGCACTTTaGTCTTCGAGTACTTTTAACTCTTCCTTCAGCCTT +
Preference number: 6 (lower is better)
Translates to: CMSATLLENSAL*SSSTFNSSFSL
Trigger: AAGGCTGAAGGAAGAGTTAAAAGTACTCGAAGAGCAAAGTGCAGAATTTTCTAGAAGAGTGGCTGACATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp ACAGTACGCTTCAGTTCTTCAACAGCTCGAAGATACTaGGCCAGACTATTGGTATTAAGAATTTCCAATGCT +
Preference number: 6 (lower is better)
Translates to: TVRFSSSTARRY*ARLLVLRISNA
Trigger: AGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACTGAAGCGTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AATCTCAGAAGCACATTTCAGAAGTCTCGCTATCTTTaGTTCGTAATCTCGGAGTGCTCTCTTCAATTCTTG +
Preference number: 6 (lower is better)
Translates to: NLRSTFQKSRYL*FVISECSLQFL
Trigger: CAAGAATTGAAGAGAGCACTCCGAGATTACGAACAAAAGATAGCGAGACTTCTGAAATGTGCTTCTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp TCCAAGAGTCAAGAAATCAGAAAGTTTTTGCAGCCTTaGTTCCAGGCTCAGTTTTGTTTCTGGTGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: SKSQEIRKFLQP*FQAQFCFWWFK
Trigger: TTTGAACCACCAGAAACAAAACTGAGCCTGGAACAAAGGCTGCAAAAACTTTCTGATTTCTTGACTCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS TCA 72 bp TCCAGAAGTTCAATGGCTGCTCTTCTTGCTTCTAAGTaGGTAGATAATTCCTCCATCCCTTTTAATTGTTCA +
Preference number: 6 (lower is better)
Translates to: SRSSMAALLASK*VDNSSIPFNCS
Trigger: TGAACAATTAAAAGGGATGGAGGAATTATCTACTCACTTAGAAGCAAGAAGAGCAGCCATTGAACTTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TTTACACATAAAGGCTGCTGTAACCGAGACTGTATTTaGTTTAAAACATGTAGGGCGTTTTCTAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: FTHKGCCNRDCI*FKTCRAFSSFS
Trigger: AGAGAAGCTAGAAAACGCCCTACATGTTTTAAAGCAAATACAGTCTCGGTTACAGCAGCCTTTATGTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CCA 72 bp TCCTGTAACTTCTGCATTCTCTCCTTAGCCATTATTTaGTCCTTAGATCCATCACAAAGACTGAAATATTCC +
Preference number: 6 (lower is better)
Translates to: SCNFCILSLAII*SLDPSQRLKYS
Trigger: GGAATATTTCAGTCTTTGTGATGGATCTAAGGACCAAATAATGGCTAAGGAGAGAATGCAGAAGTTACAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp AGTTCTTCAACAGCTCGAAGATACTTGGCCAGACTATaGGTATTAAGAATTTCCAATGCTTCCTTGTACTTC +
Preference number: 6 (lower is better)
Translates to: SSSTARRYLARL*VLRISNASLYF
Trigger: GAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS CAA 72 bp ATTTCGTTCAAAGACTGTTGCAAAGCCGTCTTCTTCTaGATGAGTTGGCTGTATAATCGCTTTACTTCATTC +
Preference number: 6 (lower is better)
Translates to: ISFKDCCKAVFF*MSWLYNRFTSF
Trigger: GAATGAAGTAAAGCGATTATACAGCCAACTCATCAAGAAGAAGACGGCTTTGCAACAGTCTTTGAACGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8
CDS GCA 72 bp TCTTTAATAATCTTCTGTCCCACTGAAGATGTATTTTaGTTGATGGATTTCGCTAAAGCAGAAGCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: SLIIFCPTEDVF*LMDFAKAEAFF
Trigger: AAAGAAGGCTTCTGCTTTAGCGAAATCCATCAAGCAAAATACATCTTCAGTGGGACAGAAGATTATTAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044217.16
ENSMUST00000143031.8