Pregenerated sensors for SYNDIG1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071234Ensembl transcript IDs: ENSMUST00000095550.4, ENSMUST00000222422.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCAAGAGGGCAAGATaGCCCCTGTGTGGGCTGCAGAACGGGAGGTCTCTCCTCAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: PSLLWDWKTVGKRAR*PLCGLQNGRSLLSK Trigger: CTTGCTGAGGAGAGACCTCCCGTTCTGCAGCCCACACAGGGGCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | CCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTaGGCAAGAGGGCAAGATGGCCCCTGTGTGGGCTGCAGAACGGGA | + |
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Preference number: 1 (lower is better) Translates to: PASYPHPACSGTGKQ*ARGQDGPCVGCRTG Trigger: TCCCGTTCTGCAGCCCACACAGGGGCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR GCA 90 bp | CTCTTGGACAACCCTGCTGCACCTGCTTCCTATCCACACCCAGCCTaGTCTGGGACTGGAAAACAGTGGGCAAGAGGGCAAGATGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LLDNPAAPASYPHPA*SGTGKQWARGQDGP Trigger: GGGGCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | GGACAACCCTGCTGCACCTGCTTCCTATCCACACCCAGCCTGCTCTaGGACTGGAAAACAGTGGGCAAGAGGGCAAGATGGCCCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GQPCCTCFLSTPSLL*DWKTVGKRARWPLC Trigger: ACACAGGGGCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR GCA 90 bp | GGCAGAGTACACCAGGCTAGGCCTCTTGGACAACCCTGCTGCACCTaGTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTG | + |
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Preference number: 1 (lower is better) Translates to: GRVHQARPLGQPCCT*FLSTPSLLWDWKTV Trigger: CACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAGGCCTAGCCTGGTGTACTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | CGGGTACCATCTCAGGGCCCTTCCAGCAGAGCCCAGAAAGTATGGTaGGTGAAGAACGGGAGGTCATGTGATCCTGCAGTATCCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: RVPSQGPSSRAQKVW*VKNGRSCDPAVSQA Trigger: GGCCTGGGATACTGCAGGATCACATGACCTCCCGTTCTTCACCCACCATACTTTCTGGGCTCTGCTGGAAGGGCCCTGAGATGGTACCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CCA 90 bp | CTCCAGGCAGGATCCAAGCATCCTGGGAACCTCCATGGGAGGCTCTaGCACACCCTGCCCACCAGCATGGAGAGTTATGGAGAAGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: LQAGSKHPGNLHGRL*HTLPTSMESYGEAN Trigger: ATTGGCTTCTCCATAACTCTCCATGCTGGTGGGCAGGGTGTGCCAGAGCCTCCCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CCA 90 bp | AGACTGGATACTCCAGGCAGGATCCAAGCATCCTGGGAACCTCCATaGGAGGCTCTGGCACACCCTGCCCACCAGCATGGAGAGTTATGG | + |
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Preference number: 1 (lower is better) Translates to: RLDTPGRIQASWEPP*EALAHPAHQHGELW Trigger: CCATAACTCTCCATGCTGGTGGGCAGGGTGTGCCAGAGCCTCCCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGTATCCAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CCA 90 bp | GGTCGGGTACCATCTCAGGGCCCTTCCAGCAGAGCCCAGAAAGTATaGTGGGTGAAGAACGGGAGGTCATGTGATCCTGCAGTATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GRVPSQGPSSRAQKV*WVKNGRSCDPAVSQ Trigger: CTGGGATACTGCAGGATCACATGACCTCCCGTTCTTCACCCACCATACTTTCTGGGCTCTGCTGGAAGGGCCCTGAGATGGTACCCGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR TCA 90 bp | TACCATCTCAGGGCCCTTCCAGCAGAGCCCAGAAAGTATGGTGGGTaGAGAACGGGAGGTCATGTGATCCTGCAGTATCCCAGGCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: YHLRALPAEPRKYGG*RTGGHVILQYPRPL Trigger: TAGAGGCCTGGGATACTGCAGGATCACATGACCTCCCGTTCTTCACCCACCATACTTTCTGGGCTCTGCTGGAAGGGCCCTGAGATGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CCA 90 bp | AAAATTAACTCCAGACTGGATACTCCAGGCAGGATCCAAGCATCCTaGGAACCTCCATGGGAGGCTCTGGCACACCCTGCCCACCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: KINSRLDTPGRIQAS*EPPWEALAHPAHQH Trigger: ATGCTGGTGGGCAGGGTGTGCCAGAGCCTCCCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTTAATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CCA 90 bp | AAGGTGCCCAGGCCCCATTACCGCCACTGCCCCATCATTCAGAGATaGGGAAATATCTCAGGTGGAGAGAAAGGCTTGGCCTTTCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: KVPRPHYRHCPIIQR*GNISGGEKGLAFLL Trigger: GAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAGTGGCGGTAATGGGGCCTGGGCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR GCA 90 bp | ATCTGGGAGACACCGCAGAGCGTCTTCCACAGTAACAGGGAGACATaGAGTATCCAGAGTCAGAAAGAGCAAGAGATGGCTGGGGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: IWETPQSVFHSNRET*SIQSQKEQEMAGAH Trigger: ATGGGCCCCAGCCATCTCTTGCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGACGCTCTGCGGTGTCTCCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | CAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCAAGAGATGGCTaGGGCCCATGGTTTTCTTTCCTGGTTGGAGGGTCTCAGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: QGDMQYPESERARDG*GPWFSFLVGGSQAL Trigger: CAAGGCCTGAGACCCTCCAACCAGGAAAGAAAACCATGGGCCCCAGCCATCTCTTGCTCTTTCTGACTCTGGATACTGCATGTCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | TCTTTCTCCTTCCTGGATGCTCCTGCTCATTCTCTGTGGGGAAGATaGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGTCCTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SFSFLDAPAHSLWGR*QVETELPMGQRSCR Trigger: CCTACAGGACCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATGAGCAGGAGCATCCAGGAAGGAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | GTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCAAGAGATaGCTGGGGCCCATGGTTTTCTTTCCTGGTTGGAGGGTCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: VTGRHAVSRVRKSKR*LGPMVFFPGWRVSG Trigger: GCCTGAGACCCTCCAACCAGGAAAGAAAACCATGGGCCCCAGCCATCTCTTGCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | CTTGGGAATTCTTTCTCCTTCCTGGATGCTCCTGCTCATTCTCTGTaGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LGNSFSFLDAPAHSL*GRWQVETELPMGQR Trigger: CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATGAGCAGGAGCATCCAGGAAGGAGAAAGAATTCCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CCA 90 bp | AGGTTGCTGGAGGGTTTAGGAATGGCTGCAAAATTAACTCCAGACTaGATACTCCAGGCAGGATCCAAGCATCCTGGGAACCTCCATGGG | + |
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Preference number: 1 (lower is better) Translates to: RLLEGLGMAAKLTPD*ILQAGSKHPGNLHG Trigger: CCCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CCA 90 bp | TTACCGCCACTGCCCCATCATTCAGAGATGGGGAAATATCTCAGGTaGAGAGAAAGGCTTGGCCTTTCTGCTCAGGTTGCTGGAGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: LPPLPHHSEMGKYLR*RERLGLSAQVAGGF Trigger: AAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAGTGGCGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR GCA 90 bp | AGGCTTGGCCTTTCTGCTCAGGTTGCTGGAGGGTTTAGGAATGGCTaGAAAATTAACTCCAGACTGGATACTCCAGGCAGGATCCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: RLGLSAQVAGGFRNG*KINSRLDTPGRIQA Trigger: TGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CAA 90 bp | CAGAGGTCCTGTAGGGAGTGGGCAGAGTACACCAGGCTAGGCCTCTaGGACAACCCTGCTGCACCTGCTTCCTATCCACACCCAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QRSCREWAEYTRLGL*DNPAAPASYPHPAC Trigger: GCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAGGCCTAGCCTGGTGTACTCTGCCCACTCCCTACAGGACCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGTTATCAGTGAAGGTGCCCAGGCCCCATTACCGCCACTGCCCCATCATTCAAGGATCCAAGCATCCTaGGAACCTCCATGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: AVISEGAQAPLPPLPHHSRIQAS*EPPWEA Trigger: AGCCTCCCATGGAGGTTCCCAGGATGCTTGGATCCT...TGAATGATGGGGCAGTGGCGGTAATGGGGCCTGGGCACCTTCACTGATAACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR CCA 90 bp | GCGGTTATCAGTGAAGGTGCCCAGGCCCCATTACCGCCACTGCCCCATCATTCAGTGGAGAGAAAGGCTTaGCCTTTCTGCTCAGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: AVISEGAQAPLPPLPHHSVERKA*PFCSGC Trigger: GCAACCTGAGCAGAAAGGCCAAGCCTTTCTCTCCAC...TGAATGATGGGGCAGTGGCGGTAATGGGGCCTGGGCACCTTCACTGATAACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR GCA 90 bp | CATTCTCTGTGGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGCAACCCTGCTGCACCTaGTTCCTATCCACACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HSLWGRWQVETELPMGQRQPCCT*FLSTPS Trigger: GCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTG...CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGTCCTGTAGGGAGTGGGCACTTGGACAACCCTGCTaGACCTGCTTCCTATCCACA | + |
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Preference number: 2 (lower is better) Translates to: WQVETELPMGQRSCREWALGQPC*TCFLST Trigger: TGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAG...TGCCCACTCCCTACAGGACCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCTCTGTGGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGACACCCAGCCTGCTCTaGGACTGGAAAACAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: HSLWGRWQVETELPMGQRTPSLL*DWKTVG Trigger: GCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGT...CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGTCCCTTCTCATCCTTTTCTGGATGAGGCTGGATCCAGGACCCTGCGCGCCCAGAAAGTATGGTaGGTGAAGAACGGGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: IPVPSHPFLDEAGSRTLRAQKVW*VKNGRS Trigger: TGACCTCCCGTTCTTCACCCACCATACTTTCTGGGC...GCGCAGGGTCCTGGATCCAGCCTCATCCAGAAAAGGATGAGAAGGGACTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR CCA 90 bp | CATTCTCTGTGGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGAGCCTGCTCTGGGACTaGAAAACAGTGGGCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HSLWGRWQVETELPMGQRSLLWD*KTVGKR Trigger: CCTCTTGCCCACTGTTTTCCAGTCCCAGAGCAGGCT...CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGAGACACTATCCACACCCAGCCTaGTCTGGGACTGGAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SNLPSLQSSLAPSLSGRHYPHPA*SGTGKQ Trigger: CTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATA...GTGTCTCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCGTCTTCCACAGTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCGGGACTGGAAAACAGTaGGCAAGAGGGCAAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: RASSTVTGRHAVSRVRKSGTGKQ*ARGQDG Trigger: GCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCC...GCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGACGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCGTCTTCCACAGTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCCTTGGACAACCCTGCTaGACCTGCTTCCTATCCACA | + |
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Preference number: 2 (lower is better) Translates to: RASSTVTGRHAVSRVRKSLGQPC*TCFLST Trigger: TGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAG...GCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGACGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATAGGTCCTGTAGGGAGTaGGCAGAGTACACCAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: RKALATCPHYRALWLHLYRSCRE*AEYTRL Trigger: TAGCCTGGTGTACTCTGCCCACTCCCTACAGGACCT...ATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGTCTCTGTGGGGAAGATaGCAAGTAGAGACTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SLSNLPSLQSSLAPSLSGSLWGR*QVETEL Trigger: CAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGA...CCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAGGCTTGGCCTTTCTGCTCAGGTTGCTGGAGGGTTTAGGAATGGCTGCACATTACAGAGCTCTCTaGCTCCATCTCTATCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: EKGLAFLLRLLEGLGMAAHYRAL*LHLYLG Trigger: TCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATG...TGCAGCCATTCCTAAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCAATTCCTTAGGCATCTGTCTATGTTCCTCCTCTGTCTGTATCCCAGTCTCATCCTTTTCTGGATaGGGCTGGATCCAGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: EANSLGICLCSSSVCIPVSSFSG*GWIQDP Trigger: AGGGTCCTGGATCCAGCCTCATCCAGAAAAGGATGA...GACTGGGATACAGACAGAGGAGGAACATAGACAGATGCCTAAGGAATTGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTCTTCCTGGATGCTCCTaGTCATTCTCTGTGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: KSLSNLPSLQSSLAPSLSLPGCS*SFSVGK Trigger: CTTCCCCACAGAGAATGAGCAGGAGCATCCAGGAAG...AGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCGTCTTCCACAGTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCCCTGCTCATTCTCTGTaGGGAAGATGGCAAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: RASSTVTGRHAVSRVRKSPAHSL*GRWQVE Trigger: CTCTACTTGCCATCTTCCCCACAGAGAATGAGCAGG...GCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGACGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CAA 90 bp | GGAAATATCTCAGGTGGAGAGAAAGGCTTGGCCTTTCTGCTCAGGTaGCTGGAGGGTTTAGGAATGGCTGCAAAATTAACTCCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: GNISGGEKGLAFLLR*LEGLGMAAKLTPDW Trigger: CCAGTCTGGAGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGAGATATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR GCA 90 bp | AGCATGGAGAGTTATGGAGAAGCCAATTCCTTAGGCATCTGTCTATGTTCCTCCTATCCACACCCAGCCTaGTCTGGGACTGGAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SMESYGEANSLGICLCSSYPHPA*SGTGKQ Trigger: CTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATA...GGAGGAACATAGACAGATGCCTAAGGAATTGGCTTCTCCATAACTCTCCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCAATTCCTTAGGCATCTGTCTATGTTCCTCCTCTGTCTGTATCCCAGTCGTTTTCTTTCCTGGTTaGAGGGTCTCAGGCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: EANSLGICLCSSSVCIPVVFFPG*RVSGLE Trigger: CTCAAGGCCTGAGACCCTCCAACCAGGAAAGAAAAC...GACTGGGATACAGACAGAGGAGGAACATAGACAGATGCCTAAGGAATTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATAGAGCAAGAGATGGCTaGGGCCCATGGTTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RKALATCPHYRALWLHLYRARDG*GPWFSF Trigger: GAAAGAAAACCATGGGCCCCAGCCATCTCTTGCTCT...ATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCCAATTCCTTAGGCATCTGTCTATGTTCCTCCTCTGTCTGTATCCCAGTCTTTCTCCTTCCTGGATaGTCCTGCTCATTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: EANSLGICLCSSSVCIPVFLLPG*SCSFSV Trigger: CACAGAGAATGAGCAGGAGCATCCAGGAAGGAGAAA...GACTGGGATACAGACAGAGGAGGAACATAGACAGATGCCTAAGGAATTGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTTTTCTCCTTCCTGGATaGTCCTGCTCATTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KSLSNLPSLQSSLAPSLSFLLPG*SCSFSV Trigger: CACAGAGAATGAGCAGGAGCATCCAGGAAGGAGAAA...AGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | TTAACTGAAAAGTCTAGCCAGGTTCTTGATCCCTTGGGAATTCTTTCTCCTTCCGGGACTGGAAAACAGTaGGCAAGAGGGCAAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: LTEKSSQVLDPLGILSPSGTGKQ*ARGQDG Trigger: GCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCC...GGAAGGAGAAAGAATTCCCAAGGGATCAAGAACCTGGCTAGACTTTTCAGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGATGGGGAAATATCTCAGGTGGAGAGAAAGGCTTGGCCTTTCTGCTCAGATTCTTTCTCCTTCCTaGATGCTCCTGCTCATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SEMGKYLRWRERLGLSAQILSPS*MLLLIL Trigger: GAGAATGAGCAGGAGCATCCAGGAAGGAGAAAGAAT...CTGAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGAGATATTTCCCCATCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCAGAAAGAGCAAGAGATGGCTGGGGCCCATGGTTTTCTTTCCTGGTTGGAGGTTCTTGATCCCTTaGGAATTCTTTCTCCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVRKSKRWLGPMVFFPGWRFLIP*EFFLLP Trigger: AGGAAGGAGAAAGAATTCCCAAGGGATCAAGAACCT...CCAACCAGGAAAGAAAACCATGGGCCCCAGCCATCTCTTGCTCTTTCTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGGTTGCTGGAGGGTTTAGGAATGGCTGCAAAATTAACTCCAGACTGGATACATGGTTTTCTTTCCTaGTTGGAGGGTCTCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LRLLEGLGMAAKLTPDWIHGFLS*LEGLRP Trigger: AGGCCTGAGACCCTCCAACCAGGAAAGAAAACCATG...TATCCAGTCTGGAGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCTATGTTCCTCCTCTGTCTGTATCCCAGTCCCTTCTCATCCTTTTCTGGATCTTCAGGGCCAAGGTaGTCCATAGAATACACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LSMFLLCLYPSPFSSFSGSSGPR*SIEYTV Trigger: AACTGTGTATTCTATGGAGCACCTTGGCCCTGAAGA...TCCAGAAAAGGATGAGAAGGGACTGGGATACAGACAGAGGAGGAACATAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATTCTTCAGGGCCAAGGTaGTCCATAGAATACACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RKALATCPHYRALWLHLYSSGPR*SIEYTV Trigger: AACTGTGTATTCTATGGAGCACCTTGGCCCTGAAGA...ATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCATGGAGAGTTATGGAGAAGCCAATTCCTTAGGCATCTGTCTATGTTCCTCCTCTCTGTGGGGAAGATaGCAAGTAGAGACTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SMESYGEANSLGICLCSSSLWGR*QVETEL Trigger: CAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGA...GGAGGAACATAGACAGATGCCTAAGGAATTGGCTTCTCCATAACTCTCCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR GCA 72 bp | CACCAGGCTAGGCCTCTTGGACAACCCTGCTGCACCTaGTTCCTATCCACACCCAGCCTGCTCTGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HQARPLGQPCCT*FLSTPSLLWDW Trigger: CCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAGGCCTAGCCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR CCA 72 bp | ACTCCAGGCAGGATCCAAGCATCCTGGGAACCTCCATaGGAGGCTCTGGCACACCCTGCCCACCAGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: TPGRIQASWEPP*EALAHPAHQHG Trigger: TCCATGCTGGTGGGCAGGGTGTGCCAGAGCCTCCCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR GCA 72 bp | GGCAGAGTACACCAGGCTAGGCCTCTTGGACAACCCTaGTGCACCTGCTTCCTATCCACACCCAGCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRVHQARPLGQP*CTCFLSTPSLL Trigger: GAGCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAGGCCTAGCCTGGTGTACTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR CCA 72 bp | CTCTGGGACTGGAAAACAGTGGGCAAGAGGGCAAGATaGCCCCTGTGTGGGCTGCAGAACGGGAGGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LWDWKTVGKRAR*PLCGLQNGRSL Trigger: GAGAGACCTCCCGTTCTGCAGCCCACACAGGGGCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR CCA 72 bp | TATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTaGGCAAGAGGGCAAGATGGCCCCTGTGTGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YPHPACSGTGKQ*ARGQDGPCVGC Trigger: GCAGCCCACACAGGGGCCATCTTGCCCTCTTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR CCA 72 bp | TCCAGACTGGATACTCCAGGCAGGATCCAAGCATCCTaGGAACCTCCATGGGAGGCTCTGGCACACCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRLDTPGRIQAS*EPPWEALAHPA Trigger: GGCAGGGTGTGCCAGAGCCTCCCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGTATCCAGTCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR GCA 72 bp | CAGTGGGCAAGAGGGCAAGATGGCCCCTGTGTGGGCTaGAGAACGGGAGGTCTCTCCTCAGCAAGCTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: QWARGQDGPCVG*RTGGLSSASYC Trigger: ACAATAGCTTGCTGAGGAGAGACCTCCCGTTCTGCAGCCCACACAGGGGCCATCTTGCCCTCTTGCCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR GCA 72 bp | AGAGTACACCAGGCTAGGCCTCTTGGACAACCCTGCTaGACCTGCTTCCTATCCACACCCAGCCTGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVHQARPLGQPC*TCFLSTPSLLW Trigger: CCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAGGCCTAGCCTGGTGTACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR CCA 72 bp | GTGGTGGTGGTGGAGGGGGTTGAAAGCAGTCGTGAGTaGCGGTTATCAGTGAAGGTGCCCAGGCCCCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: VVVVEGVESSRE*RLSVKVPRPHY Trigger: GTAATGGGGCCTGGGCACCTTCACTGATAACCGCCACTCACGACTGCTTTCAACCCCCTCCACCACCACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CCA 72 bp | ACTGAGTTGCCTATGGGGCAGAGGTCCTGTAGGGAGTaGGCAGAGTACACCAGGCTAGGCCTCTTGGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: TELPMGQRSCRE*AEYTRLGLLDN Trigger: GTTGTCCAAGAGGCCTAGCCTGGTGTACTCTGCCCACTCCCTACAGGACCTCTGCCCCATAGGCAACTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR TCA 72 bp | AGGGCCCTTCCAGCAGAGCCCAGAAAGTATGGTGGGTaGAGAACGGGAGGTCATGTGATCCTGCAGTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: RALPAEPRKYGG*RTGGHVILQYP Trigger: GGGATACTGCAGGATCACATGACCTCCCGTTCTTCACCCACCATACTTTCTGGGCTCTGCTGGAAGGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CCA 72 bp | AGGCCCCATTACCGCCACTGCCCCATCATTCAGAGATaGGGAAATATCTCAGGTGGAGAGAAAGGCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RPHYRHCPIIQR*GNISGGEKGLA Trigger: GGCCAAGCCTTTCTCTCCACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAGTGGCGGTAATGGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CCA 72 bp | AAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTaGCTCCATCTCTATCTGGGAGACACCGCAGAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: KALATCPHYRAL*LHLYLGDTAER Trigger: ACGCTCTGCGGTGTCTCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGCTCCTCAGCAAGCTATaGTCGCAGGTTCTCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSNLPSLQSSLAPSLSGLLSKL*SQVLFR Trigger: CCTGAAGAGAACCTGCGACAATAGCTTGCTGAGGAG...CCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| 3UTR TCA 72 bp | CCAGAAAGTATGGTGGGTGAAGAACGGGAGGTCATGTaGTCCTGCAGTATCCCAGGCCTCTATCCTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PESMVGEEREVM*SCSIPGLYPLC Trigger: ACAGAGAGGATAGAGGCCTGGGATACTGCAGGATCACATGACCTCCCGTTCTTCACCCACCATACTTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR GCA 72 bp | TTATCAGTGAAGGTGCCCAGGCCCCATTACCGCCACTaGCCCATCATTCAGAGATGGGGAAATATCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSVKVPRPHYRH*PIIQRWGNISG Trigger: ACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAGTGGCGGTAATGGGGCCTGGGCACCTTCACTGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CCA 72 bp | GCTCTGGCACACCCTGCCCACCAGCATGGAGAGTTATaGAGAAGCCAATTCCTTAGGCATCTGTCTATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALAHPAHQHGEL*RSQFLRHLSMF Trigger: GAACATAGACAGATGCCTAAGGAATTGGCTTCTCCATAACTCTCCATGCTGGTGGGCAGGGTGTGCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR-3UTR CAA 90 bp | TACCGCCACTGCCCCATCATTCAGAGATGGGGAAATATCTCAGGTGGAGAGAAACTCCTCAGCAAGCTATaGTCGCAGGTTCTCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YRHCPIIQRWGNISGGEKLLSKL*SQVLFR Trigger: CCTGAAGAGAACCTGCGACAATAGCTTGCTGAGGAG...TTTCTCTCCACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAGTGGCGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CCA 72 bp | CTGCCCCATCATTCAGAGATGGGGAAATATCTCAGGTaGAGAGAAAGGCTTGGCCTTTCTGCTCAGGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPHHSEMGKYLR*RERLGLSAQVA Trigger: AGCAACCTGAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CCA 72 bp | TCTTTCTCCTTCCTGGATGCTCCTGCTCATTCTCTGTaGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: SFSFLDAPAHSL*GRWQVETELPM Trigger: CATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATGAGCAGGAGCATCCAGGAAGGAGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGTTGCTGGAGGGTTTAGGAATGGCTGCAAAATTAACTCCAGACTGGATACAGGTTCTTGATCCCTaGGGAATTCTTTCTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LRLLEGLGMAAKLTPDWIQVLDP*GILSPS Trigger: GGAAGGAGAAAGAATTCCCAAGGGATCAAGAACCTG...TATCCAGTCTGGAGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| CDS-3UTR CCA 90 bp | GCACCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCAGGGTCTAGGAGCTGGTaGGCACGGGCGGGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: APASYPHPACSGTGKQWAGSRSW*ARAGPA Trigger: TGCTGGTCCCGCCCGTGCCCACCAGCTCCTAGACCC...TGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR GCA 90 bp | AGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGCTCGGCGAGAGGTGGTaGTGGCCAGGCGGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSNLPSLQSSLAPSLSGLGERW*WPGGSP Trigger: GGGACTTCCGCCTGGCCAGCACCACCTCTCGCCGAG...CCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CCA 90 bp | AGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGAGACACGGGTCTAGGAGCTGGTaGGCACGGGCGGGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNLPSLQSSLAPSLSGRHGSRSW*ARAGPA Trigger: TGCTGGTCCCGCCCGTGCCCACCAGCTCCTAGACCC...GTGTCTCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR GCA 90 bp | CATTCTCTGTGGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGGCCTCCACGGCCAGTTaGAGGGACCCTGGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLWGRWQVETELPMGQRASTAS*RDPGSR Trigger: CCTAGACCCAGGGTCCCTGCAACTGGCCGTGGAGGC...CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR GCA 90 bp | TACCGCCACTGCCCCATCATTCAGAGATGGGGAAATATCTCAGGTGGAGAGAAACTCGGCGAGAGGTGGTaGTGGCCAGGCGGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YRHCPIIQRWGNISGGEKLGERW*WPGGSP Trigger: GGGACTTCCGCCTGGCCAGCACCACCTCTCGCCGAG...TTTCTCTCCACCTGAGATATTTCCCCATCTCTGAATGATGGGGCAGTGGCGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| 3UTR CAA 72 bp | TGTAGGGAGTGGGCAGAGTACACCAGGCTAGGCCTCTaGGACAACCCTGCTGCACCTGCTTCCTATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CREWAEYTRLGL*DNPAAPASYPH Trigger: GTGTGGATAGGAAGCAGGTGCAGCAGGGTTGTCCAAGAGGCCTAGCCTGGTGTACTCTGCCCACTCCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR TCA 90 bp | AACTCCAGACTGGATACTCCAGGCAGGATCCAAGCATCCTGGGAACCTCCATGGCTGCTTTGGGCTCTTTaGCCTTGTCCCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSRLDTPGRIQASWEPPWLLWAL*PCPSPG Trigger: TCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAG...CCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| CDS-3UTR TCA 90 bp | AGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGAGACACAGCTTGACCAGGTTCTaGGCCCTCCTCTGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNLPSLQSSLAPSLSGRHSLTRF*ALLCRS Trigger: GGACCTGCAGAGGAGGGCTCAGAACCTGGTCAAGCT...GTGTCTCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGAGCTTGACCAGGTTCTaGGCCCTCCTCTGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSNLPSLQSSLAPSLSGSLTRF*ALLCRS Trigger: GGACCTGCAGAGGAGGGCTCAGAACCTGGTCAAGCT...CCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGGCTTGGCCTTTCTGCTCAGGTTGCTGGAGGGTTTAGGAATGGCTGCAGGCGGAAGTCCCCTTTaGAGATGGCCTTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKGLAFLLRLLEGLGMAAGGSPL*RWPCWS Trigger: GGACCAGCAAGGCCATCTCCAAAGGGGACTTCCGCC...TGCAGCCATTCCTAAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCGTCTTCCACAGTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCGAGCTCGGCGAGAGGTaGTGCTGGCCAGGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RASSTVTGRHAVSRVRKSELGER*CWPGGS Trigger: ACTTCCGCCTGGCCAGCACCACCTCTCGCCGAGCTC...GCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGACGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTCTGTGGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGCTGCTTTGGGCTCTTTaGCCTTGTCCCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSLWGRWQVETELPMGQRLLWAL*PCPSPG Trigger: TCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAG...CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTCTGTGGGGAAGATGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGGCATGGAGAAGAGAGTaGGTCCCAAGTGGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLWGRWQVETELPMGQRAWRRE*VPSGPW Trigger: CCAGGGACCACTTGGGACTCACTCTCTTCTCCATGC...CCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCATCTTCCCCACAGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATGCCTCCACGGCCAGTTaGAGGGACCCTGGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKALATCPHYRALWLHLYASTAS*RDPGSR Trigger: CCTAGACCCAGGGTCCCTGCAACTGGCCGTGGAGGC...ATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCAAGGTCTCACAGCTGCCTaGTTTGGGCTCTTTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPIHTQPALGLENSGQGLTAA*FGLFDL Trigger: AAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACC...TTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCAATGGAGATGGCCTTGCTaGTCCCCTGGGAGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPIHTQPALGLENSGQWRWPC*SPGRNR Trigger: TCTATTTCTCCCAGGGGACCAGCAAGGCCATCTCCA...TTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATGAGCTCGGCGAGAGGTaGTGCTGGCCAGGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKALATCPHYRALWLHLYELGER*CWPGGS Trigger: ACTTCCGCCTGGCCAGCACCACCTCTCGCCGAGCTC...ATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGATGGAGATGGCCTTGCTaGTCCCCTGGGAGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALATCPHYRALWLHLYLGWRWPC*SPGRNR Trigger: TCTATTTCTCCCAGGGGACCAGCAAGGCCATCTCCA...TCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATGGCTGCAAAATTAACTCCAGACTGGATACTCCAGGCAGGATCCAAGCAAGTCCCCTTTGGAGATaGCCTTGCTGGTCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGCKINSRLDTPGRIQASPLWR*PCWSPG Trigger: CCCAGGGGACCAGCAAGGCCATCTCCAAAGGGGACT...TGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTTAATTTTGCAGCCATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATGGCGGAAGTCCCCTTTaGAGATGGCCTTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKALATCPHYRALWLHLYGGSPL*RWPCWS Trigger: GGACCAGCAAGGCCATCTCCAAAGGGGACTTCCGCC...ATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CCA 90 bp | AAAAGCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTCAGCGATGGAGAGTGTaGCCAGGAAGAGAGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: KSLSNLPSLQSSLAPSLSQRWRV*PGRELG Trigger: GCCGAGCTCTCTTCCTGGCCACACTCTCCATCGCTG...AGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR TCA 90 bp | TCTTCCACAGTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCAAGAGAGTTCCCTGGCTTCGGTaGAGCTGGTCTCACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSTVTGRHAVSRVRKSKRVPWLR*SWSHSC Trigger: GCAGCTGTGAGACCAGCTTCACCGAAGCCAGGGAAC...TCTCTTGCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCAGAAAGAGCAAGAGATGGCTGGGGCCCATGGTTTTCTTTCCTGGTTGGGGTCTCACAGCTGCCTaGTTTGGGCTCTTTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: RVRKSKRWLGPMVFFPGWGLTAA*FGLFDL Trigger: AAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACC...CCAACCAGGAAAGAAAACCATGGGCCCCAGCCATCTCTTGCTCTTTCTGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGTTGCTGGAGGGTTTAGGAATGGCTGCAAAATTAACTCCAGACTGGATAGCATGGAGAAGAGAGTaGGTCCCAAGTGGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLEGLGMAAKLTPDWIAWRRE*VPSGPW Trigger: CCAGGGACCACTTGGGACTCACTCTCTTCTCCATGC...TATCCAGTCTGGAGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CAA 72 bp | CAGAGATGGGGAAATATCTCAGGTGGAGAGAAAGGCTaGGCCTTTCTGCTCAGGTTGCTGGAGGGTTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: QRWGNISGGEKG*AFLLRLLEGLG Trigger: TCCTAAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGAGATATTTCCCCATCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| CDS-3UTR CCA 90 bp | TTAACTGAAAAGTCTAGCCAGGTTCTTGATCCCTTGGGAATTCTTTCTCCTTCCCAGCGATGGAGAGTGTaGCCAGGAAGAGAGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LTEKSSQVLDPLGILSPSQRWRV*PGRELG Trigger: GCCGAGCTCTCTTCCTGGCCACACTCTCCATCGCTG...GGAAGGAGAAAGAATTCCCAAGGGATCAAGAACCTGGCTAGACTTTTCAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR GCA 90 bp | TCTTCCACAGTAACAGGGAGACATGCAGTATCCAGAGTCAGAAAGAGCAAGAGACTTTGGAGATGGCCTTaGTGGTCCCCTGGGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SSTVTGRHAVSRVRKSKRLWRWP*WSPGRN Trigger: ATTTCTCCCAGGGGACCAGCAAGGCCATCTCCAAAG...TCTCTTGCTCTTTCTGACTCTGGATACTGCATGTCTCCCTGTTACTGTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| 3UTR CAA 72 bp | TCAGGTGGAGAGAAAGGCTTGGCCTTTCTGCTCAGGTaGCTGGAGGGTTTAGGAATGGCTGCAAAATTAACT | + |
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Preference number: 4 (lower is better) Translates to: SGGEKGLAFLLR*LEGLGMAAKLT Trigger: AGTTAATTTTGCAGCCATTCCTAAACCCTCCAGCAACCTGAGCAGAAAGGCCAAGCCTTTCTCTCCACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| 3UTR CAA 72 bp | CTCTTAACTGAAAAGTCTAGCCAGGTTCTTGATCCCTaGGGAATTCTTTCTCCTTCCTGGATGCTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLTEKSSQVLDP*GILSPSWMLLL Trigger: GAGCAGGAGCATCCAGGAAGGAGAAAGAATTCCCAAGGGATCAAGAACCTGGCTAGACTTTTCAGTTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CCA 90 bp | CCAGAGCTACCACCACAGCCACATAGAGACCGGCCCCCACAGCGATaGAGAGTGTGGCCAGGAAGAGAGCTCGGCGAGAGGTGGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PELPPQPHRDRPPQR*RVWPGRELGERWCW Trigger: CCAGCACCACCTCTCGCCGAGCTCTCTTCCTGGCCACACTCTCCATCGCTGTGGGGGCCGGTCTCTATGTGGCTGTGGTGGTAGCTCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CCA 90 bp | CCTGGCCCTGCAACTCCTCTTGAACCCCGTAGGACACAGTGTGGATaGTTACGTCCTCCGCAGCTTGACCAGGTTCTGAGCCCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGPATPLEPRRTQCG*LRPPQLDQVLSPPL Trigger: CAGAGGAGGGCTCAGAACCTGGTCAAGCTGCGGAGGACGTAACCATCCACACTGTGTCCTACGGGGTTCAAGAGGAGTTGCAGGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | CACCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCAATTGGGCTCTTTGACCTaGTCCCTCCCCAGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLLPIHTQPALGLENSGQLGSLT*SLPRRQ Trigger: CTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAA...TTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | TGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGTCCTGTAGGGAGTGGGCATTGGGCTCTTTGACCTaGTCCCTCCCCAGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: WQVETELPMGQRSCREWALGSLT*SLPRRQ Trigger: CTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAA...TGCCCACTCCCTACAGGACCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | GCACCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCACCTTTGGAGATGGCCTaGCTGGTCCCCTGGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: APASYPHPACSGTGKQWAPLEMA*LVPWEK Trigger: TTTCTCCCAGGGGACCAGCAAGGCCATCTCCAAAGG...TGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | TGGCAAGTAGAGACTGAGTTGCCTATGGGGCAGAGGTCCTGTAGGGAGTGGGCAAGGCGGAAGTCCCCTTaGGAGATGGCCTTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WQVETELPMGQRSCREWARRKSP*EMALLV Trigger: GACCAGCAAGGCCATCTCCAAAGGGGACTTCCGCCT...TGCCCACTCCCTACAGGACCTCTGCCCCATAGGCAACTCAGTCTCTACTTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | GCGGTTATCAGTGAAGGTGCCCAGGCCCCATTACCGCCACTGCCCCATCATTCATCACAGCTGCCTGCTTaGGGCTCTTTGACCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVISEGAQAPLPPLPHHSSQLPA*GSLTLS Trigger: GGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGA...TGAATGATGGGGCAGTGGCGGTAATGGGGCCTGGGCACCTTCACTGATAACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| CDS-3UTR CAA 90 bp | CACCTGCTTCCTATCCACACCCAGCCTGCTCTGGGACTGGAAAACAGTGGGCAACCTTTGGAGATGGCCTaGCTGGTCCCCTGGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLLPIHTQPALGLENSGQPLEMA*LVPWEK Trigger: TTTCTCCCAGGGGACCAGCAAGGCCATCTCCAAAGG...TTGCCCACTGTTTTCCAGTCCCAGAGCAGGCTGGGTGTGGATAGGAAGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | AACTCCAGACTGGATACTCCAGGCAGGATCCAAGCATCCTGGGAACCTCCATGGAGGCGGAAGTCCCCTTaGGAGATGGCCTTGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: NSRLDTPGRIQASWEPPWRRKSP*EMALLV Trigger: GACCAGCAAGGCCATCTCCAAAGGGGACTTCCGCCT...CCATGGAGGTTCCCAGGATGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| CDS-3UTR CAA 90 bp | GCCTTAGCAACCTGCCCTCATTACAGAGCTCTCTGGCTCCATCTCTATCTGGGACCTGCTTTGGGCTCTTaGACCTTGTCCCTCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALATCPHYRALWLHLYLGPALGS*TLSLPR Trigger: CCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGG...TCCCAGATAGAGATGGAGCCAGAGAGCTCTGTAATGAGGGCAGGTTGCTAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS-3UTR CAA 90 bp | AGGAATGGCTGCAAAATTAACTCCAGACTGGATACTCCAGGCAGGATCCAAGCACCTGCTTTGGGCTCTTaGACCTTGTCCCTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RNGCKINSRLDTPGRIQAPALGS*TLSLPR Trigger: CCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGG...TGCTTGGATCCTGCCTGGAGTATCCAGTCTGGAGTTAATTTTGCAGCCATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095550.4 |
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| CDS CCA 72 bp | CCACATAGAGACCGGCCCCCACAGCGATGGAGAGTGTaGCCAGGAAGAGAGCTCGGCGAGAGGTGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PHRDRPPQRWRV*PGRELGERWCW Trigger: CCAGCACCACCTCTCGCCGAGCTCTCTTCCTGGCCACACTCTCCATCGCTGTGGGGGCCGGTCTCTATGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CAA 90 bp | TCGGTGAAGCTGGTCTCACAGCTGCCTGCTTTGGGCTCTTTGACCTaGTCCCTCCCCAGGAGGCAGCTAGGCCGATACCAGGCCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: SVKLVSQLPALGSLT*SLPRRQLGRYQAST Trigger: CGTGGAGGCCTGGTATCGGCCTAGCTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACCAGCTTCACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CAA 90 bp | CTGGCTTCGGTGAAGCTGGTCTCACAGCTGCCTGCTTTGGGCTCTTaGACCTTGTCCCTCCCCAGGAGGCAGCTAGGCCGATACCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LASVKLVSQLPALGS*TLSLPRRQLGRYQA Trigger: GGCCTGGTATCGGCCTAGCTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACCAGCTTCACCGAAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CAA 72 bp | CTGGTCTCACAGCTGCCTGCTTTGGGCTCTTTGACCTaGTCCCTCCCCAGGAGGCAGCTAGGCCGATACCAG | + |
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Preference number: 6 (lower is better) Translates to: LVSQLPALGSLT*SLPRRQLGRYQ Trigger: CTGGTATCGGCCTAGCTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CAA 72 bp | GTGAAGCTGGTCTCACAGCTGCCTGCTTTGGGCTCTTaGACCTTGTCCCTCCCCAGGAGGCAGCTAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VKLVSQLPALGS*TLSLPRRQLGR Trigger: TCGGCCTAGCTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACCAGCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CAA 90 bp | AAAGGTTCCCTGGCTTCGGTGAAGCTGGTCTCACAGCTGCCTGCTTaGGGCTCTTTGACCTTGTCCCTCCCCAGGAGGCAGCTAGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: KGSLASVKLVSQLPA*GSLTLSLPRRQLGR Trigger: TCGGCCTAGCTGCCTCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACCAGCTTCACCGAAGCCAGGGAACCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS TCA 72 bp | CCTCTGCAGGTCCCGCTAAAGGTTCCCTGGCTTCGGTaGAGCTGGTCTCACAGCTGCCTGCTTTGGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLQVPLKVPWLR*SWSHSCLLWAL Trigger: AAGAGCCCAAAGCAGGCAGCTGTGAGACCAGCTTCACCGAAGCCAGGGAACCTTTAGCGGGACCTGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS GCA 72 bp | TTCCCTGGCTTCGGTGAAGCTGGTCTCACAGCTGCCTaGTTTGGGCTCTTTGACCTTGTCCCTCCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FPGFGEAGLTAA*FGLFDLVPPQE Trigger: CTCCTGGGGAGGGACAAGGTCAAAGAGCCCAAAGCAGGCAGCTGTGAGACCAGCTTCACCGAAGCCAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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| CDS CCA 72 bp | GCAACTCCTCTTGAACCCCGTAGGACACAGTGTGGATaGTTACGTCCTCCGCAGCTTGACCAGGTTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ATPLEPRRTQCG*LRPPQLDQVLS Trigger: GCTCAGAACCTGGTCAAGCTGCGGAGGACGTAACCATCCACACTGTGTCCTACGGGGTTCAAGAGGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095550.4 ENSMUST00000222422.2 |
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